Unique Name Descriptor Wide Peak Limits Peak Limits Region Limits q values Residual q values after removing segments shared with higher peaks Broad or Focal Amplitude Threshold TCGA-3L-AA1B-01A-11D-A36W-01 TCGA-4N-A93T-01A-11D-A36W-01 TCGA-4T-AA8H-01A-11D-A40O-01 TCGA-5M-AAT4-01A-11D-A40O-01 TCGA-5M-AAT5-01A-21D-A40O-01 TCGA-5M-AAT6-01A-11D-A40O-01 TCGA-5M-AATA-01A-31D-A40O-01 TCGA-5M-AATE-01A-11D-A40O-01 TCGA-A6-2671-01A-01D-1549-01 TCGA-A6-2672-01A-01D-1549-01 TCGA-A6-2674-01A-02D-1549-01 TCGA-A6-2675-01A-02D-1717-01 TCGA-A6-2676-01A-01D-1549-01 TCGA-A6-2677-01A-01D-A274-01 TCGA-A6-2678-01A-01D-1549-01 TCGA-A6-2679-01A-02D-1549-01 TCGA-A6-2680-01A-01D-1549-01 TCGA-A6-2681-01A-01D-1549-01 TCGA-A6-2682-01A-01D-1549-01 TCGA-A6-2683-01A-01D-1549-01 TCGA-A6-2684-01A-01D-A274-01 TCGA-A6-2685-01A-01D-1549-01 TCGA-A6-2686-01A-01D-1549-01 TCGA-A6-3807-01A-01D-1018-01 TCGA-A6-3809-01A-01D-A274-01 TCGA-A6-3810-01A-01D-A274-01 TCGA-A6-4105-01A-02D-1770-01 TCGA-A6-4107-01A-02D-1549-01 TCGA-A6-5656-01A-21D-A274-01 TCGA-A6-5657-01A-01D-1649-01 TCGA-A6-5659-01A-01D-A274-01 TCGA-A6-5660-01A-01D-1649-01 TCGA-A6-5661-01A-01D-1649-01 TCGA-A6-5662-01A-01D-1649-01 TCGA-A6-5664-01A-21D-1834-01 TCGA-A6-5665-01A-01D-1649-01 TCGA-A6-5666-01A-01D-1649-01 TCGA-A6-5667-01A-21D-1717-01 TCGA-A6-6137-01A-11D-1770-01 TCGA-A6-6138-01A-11D-1770-01 TCGA-A6-6140-01A-11D-1770-01 TCGA-A6-6141-01A-11D-1770-01 TCGA-A6-6142-01A-11D-1770-01 TCGA-A6-6648-01A-11D-1770-01 TCGA-A6-6649-01A-11D-1770-01 TCGA-A6-6650-01A-11D-A274-01 TCGA-A6-6651-01A-21D-1834-01 TCGA-A6-6652-01A-11D-1770-01 TCGA-A6-6653-01A-11D-1770-01 TCGA-A6-6654-01A-21D-1834-01 TCGA-A6-6780-01A-11D-A274-01 TCGA-A6-6781-01A-22D-A274-01 TCGA-A6-6782-01A-11D-1834-01 TCGA-A6-A565-01A-31D-A28F-01 TCGA-A6-A566-01A-11D-A28F-01 TCGA-A6-A567-01A-31D-A28F-01 TCGA-A6-A56B-01A-31D-A28F-01 TCGA-A6-A5ZU-01A-11D-A28F-01 TCGA-AA-3488-01A-01D-1406-01 TCGA-AA-3489-01A-21D-1834-01 TCGA-AA-3492-01A-01D-1406-01 TCGA-AA-3494-01A-01D-1406-01 TCGA-AA-3495-01A-01D-1406-01 TCGA-AA-3496-01A-21D-1834-01 TCGA-AA-3502-01A-01D-1406-01 TCGA-AA-3506-01A-01D-1406-01 TCGA-AA-3510-01A-01D-1406-01 TCGA-AA-3511-01A-21D-1834-01 TCGA-AA-3514-01A-02D-1549-01 TCGA-AA-3516-01A-02D-1549-01 TCGA-AA-3517-01A-01D-1549-01 TCGA-AA-3518-01A-02D-1549-01 TCGA-AA-3519-01A-02D-1549-01 TCGA-AA-3520-01A-01D-1549-01 TCGA-AA-3521-01A-01D-1549-01 TCGA-AA-3522-01A-01D-1549-01 TCGA-AA-3524-01A-02D-1549-01 TCGA-AA-3525-01A-02D-1549-01 TCGA-AA-3526-01A-02D-1549-01 TCGA-AA-3527-01A-01D-1549-01 TCGA-AA-3529-01A-02D-1549-01 TCGA-AA-3530-01A-01D-1549-01 TCGA-AA-3531-01A-01D-1549-01 TCGA-AA-3532-01A-01D-1549-01 TCGA-AA-3534-01A-01D-1549-01 TCGA-AA-3538-01A-01D-0819-01 TCGA-AA-3542-01A-02D-0819-01 TCGA-AA-3543-01A-01D-0824-01 TCGA-AA-3544-01A-01D-0819-01 TCGA-AA-3548-01A-01D-0819-01 TCGA-AA-3549-01A-02D-0819-01 TCGA-AA-3552-01A-01D-0819-01 TCGA-AA-3553-01A-01D-0819-01 TCGA-AA-3554-01A-01D-0824-01 TCGA-AA-3555-01A-01D-0819-01 TCGA-AA-3556-01A-01D-0819-01 TCGA-AA-3558-01A-01D-0819-01 TCGA-AA-3560-01A-01D-0819-01 TCGA-AA-3561-01A-01D-0819-01 TCGA-AA-3562-01A-02D-0819-01 TCGA-AA-3655-01A-02D-1717-01 TCGA-AA-3660-01A-01D-1717-01 TCGA-AA-3662-01A-01D-1717-01 TCGA-AA-3663-01A-01D-1717-01 TCGA-AA-3664-01A-01D-0903-01 TCGA-AA-3666-01A-02D-0903-01 TCGA-AA-3667-01A-01D-0903-01 TCGA-AA-3672-01A-01D-0903-01 TCGA-AA-3673-01A-01D-0903-01 TCGA-AA-3675-01A-02D-0903-01 TCGA-AA-3678-01A-01D-0903-01 TCGA-AA-3679-01A-02D-0903-01 TCGA-AA-3680-01A-01D-0903-01 TCGA-AA-3681-01A-01D-0903-01 TCGA-AA-3684-01A-02D-0903-01 TCGA-AA-3685-01A-02D-0903-01 TCGA-AA-3688-01A-01D-0903-01 TCGA-AA-3692-01A-01D-0903-01 TCGA-AA-3693-01A-01D-0903-01 TCGA-AA-3695-01A-01D-0903-01 TCGA-AA-3696-01A-01D-0903-01 TCGA-AA-3697-01A-01D-1717-01 TCGA-AA-3710-01A-01D-1018-01 TCGA-AA-3712-01A-21D-1717-01 TCGA-AA-3713-01A-21D-1717-01 TCGA-AA-3715-01A-01D-0903-01 TCGA-AA-3811-01A-01D-1018-01 TCGA-AA-3812-01A-01D-0903-01 TCGA-AA-3814-01A-01D-0903-01 TCGA-AA-3818-01A-01D-0903-01 TCGA-AA-3819-01A-01D-0903-01 TCGA-AA-3821-01A-01D-1018-01 TCGA-AA-3831-01A-01D-0903-01 TCGA-AA-3833-01A-01D-0903-01 TCGA-AA-3837-01A-01D-0903-01 TCGA-AA-3841-01A-01D-0903-01 TCGA-AA-3842-01A-01D-1018-01 TCGA-AA-3844-01A-01D-1018-01 TCGA-AA-3845-01A-01D-1018-01 TCGA-AA-3846-01A-01D-1018-01 TCGA-AA-3848-01A-01D-0903-01 TCGA-AA-3850-01A-01D-1018-01 TCGA-AA-3851-01A-01D-1018-01 TCGA-AA-3852-01A-01D-0903-01 TCGA-AA-3854-01A-01D-0903-01 TCGA-AA-3855-01A-01D-1018-01 TCGA-AA-3856-01A-01D-0903-01 TCGA-AA-3858-01A-01D-0903-01 TCGA-AA-3860-01A-02D-0903-01 TCGA-AA-3864-01A-01D-1018-01 TCGA-AA-3866-01A-01D-1018-01 TCGA-AA-3867-01A-01D-1018-01 TCGA-AA-3869-01A-01D-1018-01 TCGA-AA-3870-01A-01D-1018-01 TCGA-AA-3872-01A-01D-1018-01 TCGA-AA-3875-01A-01D-0903-01 TCGA-AA-3877-01A-01D-1018-01 TCGA-AA-3930-01A-01D-1018-01 TCGA-AA-3939-01A-01D-1018-01 TCGA-AA-3941-01A-01D-1018-01 TCGA-AA-3947-01A-01D-1018-01 TCGA-AA-3949-01A-01D-1018-01 TCGA-AA-3950-01A-02D-1018-01 TCGA-AA-3952-01A-01D-1018-01 TCGA-AA-3955-01A-02D-1018-01 TCGA-AA-3956-01A-02D-1018-01 TCGA-AA-3966-01A-01D-1427-01 TCGA-AA-3968-01A-01D-1018-01 TCGA-AA-3971-01A-01D-1018-01 TCGA-AA-3972-01A-01D-1018-01 TCGA-AA-3973-01A-01D-1018-01 TCGA-AA-3975-01A-01D-1018-01 TCGA-AA-3976-01A-01D-1018-01 TCGA-AA-3977-01A-01D-1018-01 TCGA-AA-3979-01A-01D-1018-01 TCGA-AA-3982-01A-02D-1018-01 TCGA-AA-3984-01A-02D-1018-01 TCGA-AA-3986-01A-02D-1018-01 TCGA-AA-3989-01A-01D-1019-01 TCGA-AA-3994-01A-01D-1427-01 TCGA-AA-A004-01A-01D-A008-01 TCGA-AA-A00A-01A-01D-A003-01 TCGA-AA-A00D-01A-01D-A003-01 TCGA-AA-A00E-01A-01D-A003-01 TCGA-AA-A00F-01A-01D-A003-01 TCGA-AA-A00J-01A-02D-A003-01 TCGA-AA-A00K-01A-02D-A003-01 TCGA-AA-A00L-01A-01D-A003-01 TCGA-AA-A00N-01A-02D-A008-01 TCGA-AA-A00O-01A-02D-A008-01 TCGA-AA-A00Q-01A-01D-A003-01 TCGA-AA-A00R-01A-01D-A003-01 TCGA-AA-A00U-01A-01D-A003-01 TCGA-AA-A00W-01A-01D-A003-01 TCGA-AA-A00Z-01A-01D-A003-01 TCGA-AA-A010-01A-01D-A008-01 TCGA-AA-A017-01A-01D-A008-01 TCGA-AA-A01C-01A-01D-A008-01 TCGA-AA-A01D-01A-01D-A008-01 TCGA-AA-A01F-01A-01D-A003-01 TCGA-AA-A01G-01A-01D-A003-01 TCGA-AA-A01I-01A-02D-A008-01 TCGA-AA-A01K-01A-01D-A008-01 TCGA-AA-A01P-01A-21D-A080-01 TCGA-AA-A01Q-01A-01D-A003-01 TCGA-AA-A01R-01A-21D-A080-01 TCGA-AA-A01S-01A-21D-A080-01 TCGA-AA-A01T-01A-21D-A080-01 TCGA-AA-A01V-01A-23D-A080-01 TCGA-AA-A01X-01A-21D-A080-01 TCGA-AA-A01Z-01A-11D-A080-01 TCGA-AA-A022-01A-21D-A080-01 TCGA-AA-A024-01A-02D-A008-01 TCGA-AA-A029-01A-01D-A008-01 TCGA-AA-A02E-01A-01D-A008-01 TCGA-AA-A02F-01A-01D-A008-01 TCGA-AA-A02H-01A-01D-A008-01 TCGA-AA-A02J-01A-01D-A008-01 TCGA-AA-A02O-01A-21D-A080-01 TCGA-AA-A02R-01A-01D-A008-01 TCGA-AA-A02W-01A-01D-A008-01 TCGA-AA-A02Y-01A-43D-A080-01 TCGA-AA-A03F-01A-11D-A080-01 TCGA-AA-A03J-01A-21D-A080-01 TCGA-AD-5900-01A-11D-1649-01 TCGA-AD-6548-01A-11D-1834-01 TCGA-AD-6888-01A-11D-1923-01 TCGA-AD-6889-01A-11D-1923-01 TCGA-AD-6890-01A-11D-1923-01 TCGA-AD-6895-01A-11D-1923-01 TCGA-AD-6899-01A-11D-1923-01 TCGA-AD-6901-01A-11D-1923-01 TCGA-AD-6963-01A-11D-1923-01 TCGA-AD-6964-01A-11D-1923-01 TCGA-AD-6965-01A-11D-1923-01 TCGA-AD-A5EJ-01A-11D-A28F-01 TCGA-AD-A5EK-01A-11D-A28F-01 TCGA-AM-5820-01A-01D-1649-01 TCGA-AM-5821-01A-01D-1649-01 TCGA-AU-3779-01A-01D-1717-01 TCGA-AU-6004-01A-11D-1717-01 TCGA-AY-4070-01A-01D-1427-01 TCGA-AY-4071-01A-01D-1427-01 TCGA-AY-5543-01A-01D-1649-01 TCGA-AY-6196-01A-11D-1717-01 TCGA-AY-6197-01A-11D-1717-01 TCGA-AY-6386-01A-21D-1717-01 TCGA-AY-A54L-01A-11D-A28F-01 TCGA-AY-A69D-01A-11D-A36W-01 TCGA-AY-A71X-01A-12D-A36W-01 TCGA-AY-A8YK-01A-11D-A40O-01 TCGA-AZ-4308-01A-01D-1406-01 TCGA-AZ-4313-01A-01D-1406-01 TCGA-AZ-4315-01A-01D-1406-01 TCGA-AZ-4323-01A-21D-1834-01 TCGA-AZ-4614-01A-01D-1406-01 TCGA-AZ-4615-01A-01D-1406-01 TCGA-AZ-4616-01A-21D-1834-01 TCGA-AZ-4681-01A-01D-1406-01 TCGA-AZ-4682-01B-01D-1406-01 TCGA-AZ-4684-01A-01D-1406-01 TCGA-AZ-5403-01A-01D-1649-01 TCGA-AZ-5407-01A-01D-1717-01 TCGA-AZ-6598-01A-11D-1770-01 TCGA-AZ-6599-01A-11D-1770-01 TCGA-AZ-6600-01A-11D-1770-01 TCGA-AZ-6601-01A-11D-1770-01 TCGA-AZ-6603-01A-11D-1834-01 TCGA-AZ-6605-01A-11D-1834-01 TCGA-AZ-6606-01A-11D-1834-01 TCGA-AZ-6607-01A-11D-1834-01 TCGA-AZ-6608-01A-11D-1834-01 TCGA-CA-5254-01A-21D-1834-01 TCGA-CA-5255-01A-11D-1834-01 TCGA-CA-5256-01A-01D-1406-01 TCGA-CA-5796-01A-01D-1649-01 TCGA-CA-5797-01A-01D-1649-01 TCGA-CA-6715-01A-21D-1834-01 TCGA-CA-6716-01A-11D-1834-01 TCGA-CA-6717-01A-11D-1834-01 TCGA-CA-6718-01A-11D-1834-01 TCGA-CA-6719-01A-11D-1834-01 TCGA-CK-4947-01B-11D-1649-01 TCGA-CK-4948-01B-11D-1649-01 TCGA-CK-4950-01A-01D-1717-01 TCGA-CK-4951-01A-01D-1406-01 TCGA-CK-4952-01A-01D-1717-01 TCGA-CK-5912-01A-11D-1649-01 TCGA-CK-5913-01A-11D-1649-01 TCGA-CK-5914-01A-11D-1649-01 TCGA-CK-5915-01A-11D-1649-01 TCGA-CK-5916-01A-11D-1649-01 TCGA-CK-6746-01A-11D-1834-01 TCGA-CK-6747-01A-11D-1834-01 TCGA-CK-6748-01A-11D-1834-01 TCGA-CK-6751-01A-11D-1834-01 TCGA-CM-4743-01A-01D-1717-01 TCGA-CM-4744-01A-01D-1406-01 TCGA-CM-4746-01A-01D-1406-01 TCGA-CM-4747-01A-01D-1406-01 TCGA-CM-4748-01A-01D-1406-01 TCGA-CM-4750-01A-01D-1406-01 TCGA-CM-4751-01A-02D-1834-01 TCGA-CM-4752-01A-01D-1406-01 TCGA-CM-5341-01A-01D-1406-01 TCGA-CM-5344-01A-21D-1717-01 TCGA-CM-5348-01A-21D-1717-01 TCGA-CM-5349-01A-21D-1717-01 TCGA-CM-5860-01A-01D-1649-01 TCGA-CM-5861-01A-01D-1649-01 TCGA-CM-5862-01A-01D-1649-01 TCGA-CM-5863-01A-21D-1834-01 TCGA-CM-5864-01A-01D-1649-01 TCGA-CM-5868-01A-01D-1649-01 TCGA-CM-6161-01A-11D-1649-01 TCGA-CM-6162-01A-11D-1649-01 TCGA-CM-6163-01A-11D-1649-01 TCGA-CM-6164-01A-11D-1649-01 TCGA-CM-6165-01A-11D-1649-01 TCGA-CM-6166-01A-11D-1649-01 TCGA-CM-6167-01A-11D-1649-01 TCGA-CM-6168-01A-11D-1649-01 TCGA-CM-6169-01A-11D-1649-01 TCGA-CM-6170-01A-11D-1649-01 TCGA-CM-6171-01A-11D-1649-01 TCGA-CM-6172-01A-11D-1649-01 TCGA-CM-6674-01A-11D-1834-01 TCGA-CM-6675-01A-11D-1834-01 TCGA-CM-6676-01A-11D-1834-01 TCGA-CM-6677-01A-11D-1834-01 TCGA-CM-6678-01A-11D-1834-01 TCGA-CM-6679-01A-11D-1834-01 TCGA-CM-6680-01A-11D-1834-01 TCGA-D5-5537-01A-21D-1923-01 TCGA-D5-5538-01A-01D-1649-01 TCGA-D5-5539-01A-01D-1649-01 TCGA-D5-5540-01A-01D-1649-01 TCGA-D5-5541-01A-01D-1649-01 TCGA-D5-6529-01A-11D-1770-01 TCGA-D5-6530-01A-11D-1717-01 TCGA-D5-6531-01A-11D-1717-01 TCGA-D5-6532-01A-11D-1717-01 TCGA-D5-6533-01A-11D-1717-01 TCGA-D5-6534-01A-21D-1923-01 TCGA-D5-6535-01A-11D-1717-01 TCGA-D5-6536-01A-11D-1717-01 TCGA-D5-6537-01A-11D-1717-01 TCGA-D5-6538-01A-11D-1717-01 TCGA-D5-6539-01A-11D-1717-01 TCGA-D5-6540-01A-11D-1717-01 TCGA-D5-6541-01A-11D-1717-01 TCGA-D5-6898-01A-11D-1923-01 TCGA-D5-6920-01A-11D-1923-01 TCGA-D5-6922-01A-11D-1923-01 TCGA-D5-6923-01A-11D-1923-01 TCGA-D5-6924-01A-11D-1923-01 TCGA-D5-6926-01A-11D-1923-01 TCGA-D5-6927-01A-21D-1923-01 TCGA-D5-6928-01A-11D-1923-01 TCGA-D5-6929-01A-31D-1923-01 TCGA-D5-6930-01A-11D-1923-01 TCGA-D5-6931-01A-11D-1923-01 TCGA-D5-6932-01A-11D-1923-01 TCGA-D5-7000-01A-11D-1923-01 TCGA-DM-A0X9-01A-11D-A151-01 TCGA-DM-A0XD-01A-12D-A151-01 TCGA-DM-A0XF-01A-11D-A151-01 TCGA-DM-A1D0-01A-11D-A151-01 TCGA-DM-A1D4-01A-21D-A151-01 TCGA-DM-A1D6-01A-21D-A151-01 TCGA-DM-A1D7-01A-11D-A151-01 TCGA-DM-A1D8-01A-11D-A151-01 TCGA-DM-A1D9-01A-11D-A151-01 TCGA-DM-A1DA-01A-11D-A151-01 TCGA-DM-A1DB-01A-11D-A151-01 TCGA-DM-A1HA-01A-11D-A151-01 TCGA-DM-A1HB-01A-21D-A182-01 TCGA-DM-A280-01A-12D-A16U-01 TCGA-DM-A282-01A-12D-A16U-01 TCGA-DM-A285-01A-11D-A16U-01 TCGA-DM-A288-01A-11D-A16U-01 TCGA-DM-A28A-01A-21D-A16U-01 TCGA-DM-A28C-01A-11D-A16U-01 TCGA-DM-A28E-01A-11D-A16U-01 TCGA-DM-A28F-01A-11D-A16U-01 TCGA-DM-A28G-01A-11D-A16U-01 TCGA-DM-A28H-01A-11D-A16U-01 TCGA-DM-A28K-01A-21D-A16U-01 TCGA-DM-A28M-01A-12D-A16U-01 TCGA-F4-6459-01A-11D-1770-01 TCGA-F4-6460-01A-11D-1770-01 TCGA-F4-6461-01A-11D-1770-01 TCGA-F4-6463-01A-11D-1717-01 TCGA-F4-6569-01A-11D-1770-01 TCGA-F4-6570-01A-11D-1770-01 TCGA-F4-6703-01A-11D-1834-01 TCGA-F4-6704-01A-11D-1834-01 TCGA-F4-6805-01A-11D-1834-01 TCGA-F4-6806-01A-11D-1834-01 TCGA-F4-6807-01A-11D-1834-01 TCGA-F4-6808-01A-11D-1834-01 TCGA-F4-6809-01A-11D-1834-01 TCGA-F4-6854-01A-11D-1923-01 TCGA-F4-6855-01A-11D-1923-01 TCGA-F4-6856-01A-11D-1923-01 TCGA-G4-6293-01A-11D-1717-01 TCGA-G4-6294-01A-11D-1770-01 TCGA-G4-6295-01A-11D-1717-01 TCGA-G4-6297-01A-11D-1717-01 TCGA-G4-6298-01A-11D-1717-01 TCGA-G4-6299-01A-11D-1770-01 TCGA-G4-6302-01A-11D-1717-01 TCGA-G4-6303-01A-11D-1770-01 TCGA-G4-6304-01A-11D-1923-01 TCGA-G4-6306-01A-11D-1770-01 TCGA-G4-6307-01A-11D-1717-01 TCGA-G4-6309-01A-21D-1834-01 TCGA-G4-6310-01A-11D-1717-01 TCGA-G4-6311-01A-11D-1717-01 TCGA-G4-6314-01A-11D-1717-01 TCGA-G4-6315-01A-11D-1717-01 TCGA-G4-6317-01A-11D-1717-01 TCGA-G4-6320-01A-11D-1717-01 TCGA-G4-6321-01A-11D-1717-01 TCGA-G4-6322-01A-11D-1717-01 TCGA-G4-6323-01A-11D-1717-01 TCGA-G4-6586-01A-11D-1770-01 TCGA-G4-6588-01A-11D-1770-01 TCGA-G4-6625-01A-21D-1770-01 TCGA-G4-6626-01A-11D-1770-01 TCGA-G4-6627-01A-11D-1770-01 TCGA-G4-6628-01A-11D-1834-01 TCGA-NH-A50T-01A-11D-A28F-01 TCGA-NH-A50U-01A-33D-A36W-01 TCGA-NH-A50V-01A-11D-A28F-01 TCGA-NH-A5IV-01A-42D-A36W-01 TCGA-NH-A6GA-01A-11D-A36W-01 TCGA-NH-A6GB-01A-11D-A36W-01 TCGA-NH-A6GC-01A-12D-A40O-01 TCGA-NH-A8F7-01A-11D-A40O-01 TCGA-NH-A8F8-01A-72D-A40O-01 TCGA-QG-A5YV-01A-11D-A28F-01 TCGA-QG-A5YW-01A-11D-A28F-01 TCGA-QG-A5YX-01A-11D-A28F-01 TCGA-QG-A5Z1-01A-11D-A28F-01 TCGA-QG-A5Z2-01A-11D-A28F-01 TCGA-QL-A97D-01A-12D-A40O-01 TCGA-RU-A8FL-01A-11D-A36W-01 TCGA-SS-A7HO-01A-21D-A36W-01 TCGA-T9-A92H-01A-11D-A36W-01 TCGA-WS-AB45-01A-11D-A40O-01 Amplification Peak 1 2q33.1 chr2:199627908-199644614(probes 233909:233921) chr2:199629487-199644600(probes 233910:233920) chr2:199629487-199645068(probes 233910:233923) 0.16176 0.16176 0: t<0.1; 1: 0.10.9 1 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 1 0 1 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 1 0 0 1 1 0 0 0 0 1 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 1 1 1 0 1 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 1 1 0 1 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1 1 0 0 2 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 1 1 0 0 1 1 0 0 0 1 1 0 0 Amplification Peak 2 5p13.2 chr5:27059148-50133343(probes 483024:493292) chr5:37373774-37667439(probes 488874:488896) chr5:33433425-44944345(probes 486870:493141) 0.030224 0.030224 0: t<0.1; 1: 0.10.9 1 0 0 1 0 0 1 0 0 0 1 1 0 0 0 1 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 2 1 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 1 1 1 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 2 0 2 0 0 0 1 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0 0 2 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 1 1 0 0 1 0 1 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 2 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 Amplification Peak 3 6p21.1 chr6:40092319-44407505(probes 590921:593582) chr6:41613089-41614928(probes 592099:592103) chr6:40092332-44416987(probes 590922:593584) 0.005341 0.005341 0: t<0.1; 1: 0.10.9 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 1 0 0 0 0 0 0 0 1 0 0 1 1 0 1 0 0 0 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0 0 0 1 1 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 1 1 0 1 0 2 0 0 0 1 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 1 2 0 1 1 1 0 1 0 1 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 1 0 1 0 0 1 1 0 0 1 0 1 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 2 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 1 2 1 1 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 Amplification Peak 4 8p11.23 chr8:38170522-38243864(probes 766411:766423) chr8:38204653-38237933(probes 766420:766422) chr8:36067374-48753302(probes 765388:769576) 3.4683e-13 4.9127e-11 0: t<0.1; 1: 0.10.9 1 0 2 0 0 0 2 1 0 0 0 2 0 2 0 0 0 1 1 0 0 0 0 1 0 0 0 1 2 0 0 0 0 0 0 0 1 1 1 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 2 1 1 0 0 1 1 0 0 0 0 0 1 0 1 0 1 0 1 0 0 0 1 2 1 0 0 1 0 0 0 0 0 0 1 0 0 1 0 1 1 1 1 0 1 0 1 0 1 0 0 1 1 1 2 0 0 1 1 0 0 1 1 1 1 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 2 1 0 0 1 0 0 1 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 2 0 0 0 2 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 1 1 0 0 0 1 0 1 0 0 0 0 0 0 0 2 1 1 2 1 0 2 1 1 0 0 0 0 0 0 2 2 1 1 1 0 1 1 0 0 0 0 0 1 0 0 2 2 1 0 1 0 1 0 1 0 0 1 1 1 0 1 0 0 0 0 2 0 1 1 1 1 1 0 1 0 0 1 0 1 1 1 2 0 0 2 0 0 1 1 0 1 0 0 0 0 0 2 1 0 0 0 1 0 0 0 1 2 0 1 0 2 0 0 2 1 2 0 0 0 0 0 1 1 1 0 2 0 0 0 0 0 0 2 1 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 2 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 2 1 0 1 0 0 0 0 2 0 0 0 0 1 2 1 0 0 2 0 0 1 Amplification Peak 5 8p11.21 chr8:41579827-42365372(probes 768336:768858) chr8:42000984-42016114(probes 768578:768585) chr8:36067374-48753302(probes 765388:769576) 1.605e-09 2.4853e-05 0: t<0.1; 1: 0.10.9 1 0 2 0 1 0 2 1 2 0 1 2 0 1 0 0 1 1 1 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 0 1 1 1 0 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 2 0 1 0 0 0 2 2 1 1 0 0 1 1 0 0 0 0 0 1 0 1 0 1 0 0 0 0 1 1 2 2 0 2 1 0 1 2 0 0 0 1 2 0 1 0 2 0 1 1 0 1 0 1 0 1 1 0 1 1 1 2 2 0 1 1 0 0 1 1 1 1 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 2 0 0 0 2 1 0 1 1 0 1 1 1 0 0 0 0 0 0 0 0 1 0 0 2 0 0 2 0 0 0 0 0 0 0 2 0 0 0 1 0 0 0 0 1 2 0 1 0 0 0 0 0 1 0 0 0 0 0 2 0 0 0 2 0 0 1 0 0 0 0 1 0 2 0 0 0 1 0 1 0 0 0 1 2 1 0 0 0 1 0 2 0 1 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 1 1 1 1 0 2 1 1 0 0 0 0 1 2 2 2 1 1 1 0 2 1 0 0 0 1 0 1 0 0 2 1 1 0 1 0 1 0 1 0 0 1 1 1 0 1 1 0 0 0 2 1 1 1 1 1 1 0 1 0 0 1 0 0 1 1 2 0 0 2 0 0 2 1 0 1 0 0 0 0 0 2 1 0 0 0 1 1 0 0 1 2 0 1 1 2 0 1 2 1 1 0 0 1 0 0 1 1 1 0 2 2 0 0 0 0 0 2 1 0 0 0 0 1 0 0 0 0 0 0 0 1 0 1 0 0 1 1 1 0 0 1 0 1 0 0 0 0 0 0 0 2 0 0 2 1 0 1 2 0 0 1 1 0 0 0 1 0 0 0 0 0 0 1 1 0 1 1 0 0 0 0 0 0 0 0 1 2 1 0 0 2 0 0 1 Amplification Peak 6 8q24.21 chr8:128389850-128754688(probes 815428:815725) chr8:128578774-128590175(probes 815575:815580) chr8:73011231-146364022(probes 783663:825605) 1.8273e-18 1.8273e-18 0: t<0.1; 1: 0.10.9 1 0 2 1 1 1 2 1 2 0 1 1 0 2 0 0 1 1 1 1 0 1 1 1 0 1 0 1 2 1 0 2 0 1 0 0 1 2 1 0 1 0 2 1 1 1 0 1 0 1 0 0 1 0 0 0 1 1 2 0 0 2 2 2 1 0 0 1 1 0 0 0 0 1 1 0 1 0 1 0 2 0 0 1 1 2 2 2 2 1 0 1 2 0 0 1 1 0 0 1 0 2 2 1 2 0 1 0 1 0 1 1 0 1 1 1 0 2 0 1 1 1 0 1 1 1 1 0 1 0 0 0 0 0 0 1 1 0 0 1 0 0 2 1 1 0 2 2 0 0 1 2 1 2 2 1 0 1 1 1 0 0 0 0 1 2 1 0 1 0 0 2 2 0 2 2 1 0 0 0 2 0 2 0 0 0 1 0 0 0 0 1 2 0 1 0 1 0 2 0 1 0 1 0 0 0 2 0 0 0 1 0 0 1 2 0 1 2 1 0 2 0 0 0 1 2 1 0 0 0 1 1 1 0 1 0 1 0 1 0 1 2 0 0 1 1 0 1 0 0 2 1 0 0 0 1 1 1 1 1 2 1 2 2 0 1 0 2 1 2 1 2 1 1 1 0 1 1 0 0 1 1 0 1 0 0 2 1 1 1 1 0 1 0 1 0 0 1 1 1 0 1 2 2 2 0 2 1 1 1 2 1 2 1 1 0 1 1 0 1 1 1 2 0 0 0 0 0 2 0 0 1 0 0 1 2 1 2 1 0 0 0 1 1 1 0 1 2 1 1 1 2 0 1 2 1 2 0 0 1 0 0 2 1 1 2 2 1 0 2 0 0 1 2 1 0 0 0 0 1 0 0 0 0 2 1 2 1 0 1 1 0 1 1 1 0 0 1 0 1 0 0 0 0 0 0 0 2 0 1 2 1 2 1 2 2 0 1 2 1 0 2 1 0 0 0 0 0 0 1 1 0 1 1 0 0 0 2 0 0 1 0 1 2 1 0 0 2 0 0 1 Amplification Peak 7 11p15.5 chr11:2141587-2244703(probes 974244:974271) chr11:2152221-2238395(probes 974245:974267) chr11:2105216-2294904(probes 974232:974287) 1.605e-09 1.605e-09 0: t<0.1; 1: 0.10.9 0 0 0 0 1 0 1 0 2 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 1 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 1 1 0 1 0 1 0 0 0 0 1 1 0 0 1 0 0 1 1 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 2 0 2 0 0 0 1 0 0 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 2 0 2 0 0 0 1 0 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 2 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 1 0 0 1 1 0 0 1 0 0 1 1 0 0 1 0 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 1 0 0 0 0 0 2 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0 1 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 1 2 0 0 Amplification Peak 8 12p13.33 chr12:2055585-4699385(probes 1050873:1052641) chr12:3163548-3303398(probes 1051518:1051637) chr12:1-6227918(probes 1050576:1053969) 2.8622e-08 2.8622e-08 0: t<0.1; 1: 0.10.9 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 1 2 1 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 1 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 2 0 1 0 0 0 1 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 2 0 0 0 0 0 1 0 0 0 0 1 1 0 1 0 0 0 0 1 0 1 1 0 1 0 1 1 1 0 0 0 0 0 0 1 1 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 1 1 0 1 0 1 1 0 0 0 0 0 0 0 1 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 1 1 0 0 0 0 2 1 1 0 1 0 0 0 0 0 0 0 0 0 1 1 0 1 0 1 0 1 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 0 2 1 0 0 1 1 0 0 0 0 0 0 1 0 0 1 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 1 0 2 0 2 0 0 0 0 1 0 0 1 1 0 1 0 1 1 1 0 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 1 0 0 2 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 Amplification Peak 9 13q12.13 chr13:27521847-27533641(probes 1128366:1128372) chr13:27523027-27533230(probes 1128367:1128371) chr13:1-115169878(probes 1124039:1180319) 6.534e-28 9.2832e-21 0: t<0.1; 1: 0.10.9 1 1 2 0 2 1 0 2 1 1 1 1 0 0 1 1 2 1 1 1 0 0 0 2 1 2 1 1 2 0 1 2 1 2 0 0 1 1 1 2 1 0 2 1 1 2 1 2 0 1 0 0 2 0 0 2 2 2 2 1 0 0 1 1 0 1 0 2 0 0 2 0 2 1 2 0 1 0 0 1 0 0 1 2 1 1 2 2 2 2 2 1 1 0 0 0 2 1 2 2 0 1 2 0 0 2 2 0 1 0 0 2 0 2 1 1 1 0 2 1 2 2 0 2 0 1 1 1 2 1 1 0 0 0 0 2 1 1 0 2 1 0 0 0 0 1 1 1 2 0 1 2 1 1 2 0 0 1 1 2 0 1 0 0 2 1 0 2 1 2 2 2 2 0 2 1 0 1 1 1 1 0 2 0 2 0 0 2 0 0 1 0 0 2 0 0 2 2 2 2 2 1 0 0 0 0 0 1 0 0 0 0 0 0 2 2 2 0 0 0 1 1 0 1 0 1 0 0 1 0 1 2 1 0 1 0 1 0 0 1 0 1 2 1 0 1 0 2 0 0 2 2 1 0 1 0 0 1 2 2 1 1 0 1 0 1 0 2 2 2 0 2 1 1 0 0 0 1 0 0 0 1 2 2 0 0 0 2 0 2 0 0 0 0 2 0 0 1 0 1 0 1 0 2 1 1 2 1 2 0 2 0 2 1 1 0 2 1 2 0 1 1 1 1 0 1 0 0 1 1 2 1 0 0 1 2 1 1 0 0 1 2 2 2 1 1 1 2 1 0 0 1 0 1 1 1 2 0 0 1 0 1 2 1 1 0 0 2 1 1 1 0 0 2 0 1 0 1 0 2 1 1 0 2 1 0 0 0 0 2 2 0 0 0 1 0 0 0 1 1 1 1 1 1 0 2 2 1 2 1 1 0 2 0 2 0 0 2 2 2 0 1 1 0 0 0 1 0 1 1 1 0 2 0 1 0 0 2 0 1 1 1 2 2 2 0 2 2 1 1 0 Amplification Peak 10 13q22.1 chr13:73599695-74055302(probes 1154457:1154808) chr13:73691529-73700739(probes 1154512:1154512) chr13:1-115169878(probes 1124039:1180319) 6.0835e-13 5.3253e-08 0: t<0.1; 1: 0.10.9 1 1 2 0 0 1 0 2 2 1 1 1 0 0 1 1 2 1 1 1 0 0 0 2 0 2 1 1 2 0 1 2 1 2 0 0 1 1 2 2 1 0 2 1 2 2 1 2 0 1 0 0 2 0 0 2 1 2 1 1 0 0 1 1 0 1 0 2 0 0 2 0 1 1 2 0 2 0 0 1 0 0 2 2 1 1 2 2 2 0 2 1 1 0 0 0 2 1 2 2 0 1 2 0 1 2 2 0 1 0 0 2 0 2 1 1 1 0 2 1 0 1 0 1 0 1 1 1 2 1 0 0 0 0 0 2 1 1 0 2 1 0 0 0 0 1 1 1 0 0 1 2 1 1 2 1 0 1 1 2 0 1 0 2 2 1 0 2 1 2 2 2 2 0 0 1 0 1 1 1 1 0 2 0 2 0 0 2 0 0 1 0 2 2 0 0 2 2 2 2 2 1 0 0 0 0 2 1 0 0 0 0 0 0 2 2 2 0 0 0 1 1 0 1 1 1 2 0 1 1 1 2 1 0 1 0 1 0 0 1 0 1 2 1 0 1 0 1 0 0 2 2 1 0 1 0 0 1 0 2 1 1 0 1 0 1 0 2 1 2 0 2 2 1 0 0 0 2 0 0 0 1 2 1 0 0 0 2 0 2 0 0 0 0 2 0 0 1 0 1 0 1 0 2 1 1 1 1 2 0 2 0 2 1 1 0 2 1 2 0 1 1 1 1 0 1 0 0 1 1 2 1 0 0 1 2 1 1 0 0 1 2 1 2 1 1 1 2 1 0 0 1 0 1 1 1 1 0 0 1 0 1 2 1 2 2 1 2 1 1 1 0 0 2 0 2 0 1 0 2 1 1 0 2 2 0 0 0 0 0 2 0 0 0 1 0 0 0 1 1 1 1 1 1 0 2 2 1 2 1 2 0 1 0 2 0 0 2 1 2 0 1 1 0 0 0 1 0 1 1 1 0 2 0 1 0 2 2 0 1 1 1 1 2 2 0 2 1 1 0 0 Amplification Peak 11 16p11.2 chr16:30611431-31003843(probes 1286991:1287123) chr16:30685250-30695457(probes 1287009:1287011) chr16:30488928-31011182(probes 1286962:1287125) 0.028297 0.068154 0: t<0.1; 1: 0.10.9 0 0 0 0 0 0 1 1 1 0 0 1 0 1 0 1 1 1 0 1 0 2 0 0 0 0 0 1 0 0 1 1 0 0 0 0 0 1 0 0 1 0 1 0 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 1 1 0 0 1 0 1 1 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 1 0 0 1 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 2 1 0 0 0 0 0 0 1 1 1 0 1 0 0 1 2 0 0 1 0 1 0 1 1 1 1 1 0 0 1 1 1 0 0 0 2 1 1 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 1 1 1 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 1 0 0 1 1 0 0 0 1 0 0 0 0 1 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 1 0 0 0 1 0 1 0 2 1 0 1 0 0 0 0 1 0 0 1 1 0 1 1 0 0 1 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 1 0 1 0 0 1 1 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 1 0 1 1 0 1 1 1 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 2 0 Amplification Peak 12 16q12.1 chr16:51079810-53017796(probes 1290081:1291551) chr16:51900872-51992614(probes 1290699:1290768) chr16:51900872-52035275(probes 1290699:1290803) 0.08701 0.20971 0: t<0.1; 1: 0.10.9 0 0 0 0 0 0 0 1 0 0 0 1 0 1 2 1 1 1 0 1 0 1 0 0 0 0 0 1 0 0 1 1 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 1 1 0 0 1 0 1 1 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 1 0 0 1 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 1 1 1 0 1 0 0 1 0 0 0 1 0 0 0 1 1 1 0 1 0 0 0 1 1 0 0 0 0 1 1 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 1 0 0 1 0 0 0 0 1 0 0 0 0 1 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 1 0 1 0 0 0 0 1 0 0 1 1 0 1 1 0 0 1 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 1 0 2 0 0 2 2 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 1 0 1 1 2 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 1 0 Amplification Peak 13 17p11.2 chr17:21123837-21305391(probes 1323638:1323700) chr17:21124724-21176221(probes 1323639:1323669) chr17:21113837-25270799(probes 1323633:1323702) 0.053892 0.12324 0: t<0.1; 1: 0.10.9 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 1 1 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 2 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Amplification Peak 14 17q12 chr17:37837542-38021723(probes 1329245:1329350) chr17:37942740-37965868(probes 1329329:1329339) chr17:35048714-39934521(probes 1327937:1330275) 2.3738e-14 1.1969e-13 0: t<0.1; 1: 0.10.9 1 0 1 1 0 0 0 1 0 0 1 1 0 2 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 0 1 1 0 0 0 0 1 1 1 0 0 0 1 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 1 1 1 0 1 0 0 0 0 2 0 0 0 1 0 2 0 0 0 2 0 0 1 0 0 1 0 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 1 1 0 1 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 1 2 0 2 2 0 0 1 0 0 0 0 0 0 1 1 0 0 1 1 0 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 2 0 1 0 0 0 1 0 0 0 1 0 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0 1 0 2 0 0 0 0 1 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 2 1 0 0 0 0 0 0 0 1 0 0 1 1 0 1 1 0 0 0 0 0 0 1 1 0 1 0 0 0 0 1 0 1 0 0 0 1 1 0 1 0 2 1 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 1 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 1 1 1 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 1 0 0 1 2 0 0 0 1 0 0 0 Amplification Peak 15 17q24.1 chr17:63179119-68650398(probes 1341759:1345137) chr17:63624948-63696135(probes 1342083:1342136) chr17:63369160-66551009(probes 1341914:1343727) 0.00359 0.11331 0: t<0.1; 1: 0.10.9 1 1 1 1 0 0 0 1 0 0 0 1 0 2 1 0 0 0 0 0 0 0 1 0 0 1 1 0 0 0 1 1 0 0 0 0 1 1 1 0 0 0 1 1 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 1 1 1 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 2 0 1 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 1 1 2 0 1 1 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 2 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 2 0 0 0 2 0 0 0 0 0 0 1 2 0 1 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 2 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 1 1 0 0 0 0 0 0 0 1 0 0 1 1 0 1 1 0 0 0 0 0 0 1 1 0 1 0 0 0 1 1 0 1 0 0 0 0 1 0 1 0 2 1 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 1 1 1 0 1 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 1 0 0 2 2 0 0 0 1 0 0 0 Amplification Peak 16 19q13.11 chr19:32351550-33019554(probes 1405138:1405612) chr19:32672695-32682474(probes 1405401:1405408) chr19:31637135-33022356(probes 1404653:1405614) 0.0075046 0.0075046 0: t<0.1; 1: 0.10.9 1 0 1 0 0 0 0 1 1 0 0 1 0 0 0 0 0 1 0 1 0 0 1 2 0 1 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 1 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 1 1 1 0 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 0 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 2 0 0 1 0 0 0 0 0 0 0 2 0 0 0 1 1 0 0 0 0 1 0 0 2 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 1 0 0 0 1 0 0 0 1 1 0 0 0 1 1 0 0 0 1 0 1 1 0 0 1 0 1 1 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 1 1 0 1 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 1 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 Amplification Peak 17 20p12.1 chr20:14111361-15879423(probes 1425603:1426494) chr20:14245839-14352640(probes 1425673:1425729) chr20:14245839-14454728(probes 1425673:1425761) 0.10459 0.16298 0: t<0.1; 1: 0.10.9 1 1 0 0 0 0 0 2 1 0 1 2 0 0 0 2 1 1 1 1 0 0 1 1 0 2 0 1 1 0 2 0 0 0 0 0 0 0 1 0 0 0 2 0 1 0 0 1 0 0 0 0 1 0 0 2 0 2 2 1 0 2 0 0 0 1 0 1 1 0 0 0 0 1 0 0 0 0 0 0 1 1 0 1 1 0 0 0 1 0 2 1 0 0 0 1 2 0 0 2 0 0 1 0 0 1 1 0 1 1 0 1 0 0 1 2 2 1 0 1 1 0 0 2 0 0 1 0 0 1 0 0 0 0 0 0 1 1 1 2 1 0 1 0 0 0 2 2 0 0 2 0 0 0 1 1 0 0 1 2 0 0 0 0 0 2 0 2 0 1 2 2 2 0 2 1 1 1 1 0 2 0 0 0 0 0 1 2 1 0 0 0 2 1 2 0 0 2 1 0 1 2 0 0 0 0 0 2 0 1 0 0 0 1 1 0 1 2 1 0 2 1 0 0 1 0 0 0 1 1 1 1 1 0 0 0 2 0 0 0 0 2 1 0 0 0 0 2 1 1 1 0 0 0 1 0 0 1 1 0 1 0 0 1 0 1 0 2 0 0 1 0 1 1 2 0 2 2 0 0 0 2 1 0 1 0 0 1 0 0 2 0 0 0 0 0 0 1 0 2 0 0 0 2 1 0 1 0 0 0 2 1 2 2 2 0 1 0 1 2 0 0 0 0 1 1 0 0 0 2 1 0 0 1 1 1 0 0 1 0 1 0 0 0 0 0 0 0 1 0 0 0 1 2 0 0 1 0 1 1 0 0 0 1 2 0 0 0 0 0 0 2 0 1 1 0 0 0 2 1 1 0 0 0 2 0 1 0 1 1 0 0 0 1 1 0 1 0 0 0 0 0 0 1 0 1 2 0 2 0 0 0 0 0 0 1 0 2 2 1 0 2 0 0 1 1 0 0 1 2 1 0 2 0 0 0 0 1 1 2 0 1 1 1 0 0 0 0 0 0 0 Amplification Peak 18 20p11.23 chr20:19045837-20680922(probes 1429090:1430435) chr20:19563866-19571580(probes 1429560:1429567) chr20:19046760-40360025(probes 1429091:1439416) 0.0087612 0.15466 0: t<0.1; 1: 0.10.9 1 1 0 1 2 0 0 2 1 0 1 2 0 1 0 2 1 1 1 1 0 0 1 1 0 2 2 1 0 0 2 0 0 0 0 0 0 2 1 0 0 0 2 1 1 0 0 2 0 1 0 0 1 0 0 2 0 2 2 1 0 2 0 1 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 1 1 0 1 1 0 0 0 1 0 2 1 0 0 0 1 2 0 0 2 0 0 1 0 0 1 2 0 1 1 0 1 0 0 1 1 2 1 0 1 1 0 0 2 0 0 1 0 0 1 0 0 0 0 1 0 1 1 1 2 1 0 1 0 0 0 2 2 0 0 2 0 2 0 1 1 0 0 1 2 0 0 0 0 0 2 1 2 2 1 2 0 2 0 2 1 1 1 1 0 2 0 0 0 0 0 1 2 1 0 0 0 1 1 2 0 0 2 1 0 2 2 0 0 0 0 2 2 0 1 0 0 0 1 2 2 1 2 1 0 2 1 0 0 1 1 0 0 1 1 1 1 1 0 1 0 2 0 0 2 0 2 0 0 0 0 0 2 1 1 1 0 0 0 1 0 0 1 1 0 1 1 0 1 0 1 0 2 0 0 1 2 1 1 2 0 2 2 1 0 0 2 1 0 1 0 0 1 0 0 2 0 0 0 0 0 0 1 0 2 0 2 0 2 1 0 1 0 0 0 2 1 2 2 2 0 1 1 1 2 0 0 0 0 1 1 0 0 0 2 1 0 0 1 1 1 0 2 1 0 1 0 0 0 0 1 0 0 1 0 0 1 1 2 0 0 2 0 1 1 0 0 0 1 2 1 0 1 0 0 0 2 0 1 0 2 0 0 2 1 1 0 0 2 2 0 1 0 1 1 2 0 0 1 1 0 1 0 0 0 0 0 0 1 0 1 2 0 2 0 0 0 0 0 0 2 0 2 2 1 2 0 0 0 1 1 0 0 2 2 1 0 2 0 0 0 0 1 1 0 0 2 1 1 0 0 0 0 0 1 0 Amplification Peak 19 20p11.21 chr20:25355954-25483163(probes 1433396:1433410) chr20:25447476-25481665(probes 1433397:1433409) chr20:19046760-40360025(probes 1429091:1439416) 3.951e-17 0.010424 0: t<0.1; 1: 0.10.9 1 1 0 1 2 0 0 2 1 0 1 2 0 1 0 2 1 1 1 1 0 0 1 1 0 2 2 1 1 0 2 2 0 0 0 0 0 2 1 2 2 0 2 1 1 0 0 2 0 0 0 0 1 0 0 2 0 2 2 1 0 2 0 2 0 1 0 1 1 0 2 0 0 0 2 0 0 0 0 0 1 1 0 1 1 0 2 0 1 0 2 1 0 0 0 1 2 0 0 2 0 1 1 0 0 1 2 0 1 1 0 1 0 0 1 1 2 1 2 1 1 2 0 2 0 0 1 0 0 1 1 0 0 0 1 0 2 1 1 2 1 0 1 0 0 0 2 2 0 0 2 0 1 0 1 1 0 0 1 2 0 0 0 0 2 2 1 2 2 1 2 2 2 0 2 2 1 1 1 0 2 0 0 0 0 0 1 2 1 0 0 0 1 1 2 0 2 2 1 0 2 2 0 0 0 0 0 2 0 1 0 0 0 1 1 2 1 2 1 0 2 1 0 2 1 1 0 0 1 1 1 1 1 0 1 0 1 0 0 2 0 2 2 0 1 0 0 2 1 1 1 0 0 0 1 0 0 1 1 0 1 2 0 1 0 1 0 2 0 0 1 2 1 1 2 0 2 2 1 0 0 2 1 0 1 0 0 1 0 2 2 0 0 0 0 0 0 1 0 2 0 2 0 2 1 1 1 0 2 0 2 1 2 2 2 0 1 2 1 2 0 0 2 2 1 1 0 0 0 2 1 1 0 1 1 1 0 2 1 0 1 1 2 1 0 0 0 0 1 0 0 2 1 2 0 0 2 0 1 1 0 0 0 1 2 1 0 1 0 0 0 2 0 1 0 2 0 0 2 1 1 0 0 2 2 0 1 0 1 1 2 0 0 1 1 0 2 0 0 0 2 1 0 1 0 1 2 2 2 1 0 0 2 0 2 2 0 2 2 1 2 0 0 0 1 1 0 0 2 2 1 0 2 0 0 0 0 2 1 2 0 1 1 1 2 0 1 0 0 1 0 Amplification Peak 20 20q11.21 chr20:26197900-30582729(probes 1433673:1434008) chr20:30165128-30229254(probes 1433827:1433843) chr20:19046760-40360025(probes 1429091:1439416) 1.1561e-39 5.0703e-24 0: t<0.1; 1: 0.10.9 1 1 0 1 2 0 2 2 2 0 1 2 0 1 0 2 1 1 1 1 0 1 1 1 0 2 2 1 2 0 2 2 0 2 0 0 2 2 1 2 2 0 2 2 1 2 2 2 0 2 0 0 2 0 0 2 1 2 2 1 0 2 2 2 0 1 0 2 1 0 2 0 2 0 2 0 2 0 2 0 2 1 2 1 1 2 2 0 1 1 2 1 2 0 0 1 2 2 2 2 0 1 1 0 0 1 2 0 1 1 2 1 0 1 1 2 2 1 2 1 1 2 0 2 0 0 1 1 2 1 1 0 0 0 1 2 2 1 1 2 1 0 1 0 0 2 2 2 2 0 2 2 1 0 1 2 0 0 1 2 0 0 0 0 2 2 1 2 2 2 2 2 2 0 2 2 1 1 1 0 2 0 1 0 2 0 1 2 1 2 2 0 2 1 2 0 2 2 1 2 2 2 1 0 0 0 2 2 0 1 2 0 0 1 1 2 2 2 1 0 2 1 0 2 1 1 2 0 1 1 1 1 2 0 1 0 2 1 0 2 0 2 2 1 1 0 0 2 1 1 2 2 0 0 1 0 0 1 1 2 1 2 0 1 0 1 0 2 2 0 1 2 1 1 2 0 2 2 1 0 0 2 1 1 1 0 0 2 0 2 2 0 0 0 2 0 0 1 2 2 0 2 0 2 1 1 1 2 2 0 2 1 2 2 2 0 1 2 1 2 2 1 2 2 1 1 0 0 2 2 1 2 0 1 1 1 2 2 1 0 2 2 2 1 1 1 2 2 1 0 0 2 1 2 2 2 2 0 1 1 0 0 2 1 2 1 2 1 1 2 1 2 0 1 2 2 0 0 2 1 1 1 0 2 2 0 1 0 1 2 2 0 1 1 1 0 1 0 1 1 2 2 2 1 0 1 2 2 2 1 0 0 2 0 2 2 0 2 2 1 2 2 1 0 1 1 0 0 2 2 1 0 2 0 1 0 0 2 2 2 2 1 1 1 2 0 1 2 1 2 0 Amplification Peak 21 20q12 chr20:37145354-40360023(probes 1437349:1439414) chr20:40214882-40356900(probes 1439321:1439395) chr20:19046760-40360025(probes 1429091:1439416) 1.2657e-35 4.3064e-12 0: t<0.1; 1: 0.10.9 1 1 0 1 2 0 1 2 2 0 1 2 0 1 0 2 1 1 1 1 0 1 1 1 0 2 2 1 2 0 2 2 0 2 0 0 2 2 1 2 2 0 2 2 1 2 2 2 0 2 0 0 2 0 0 2 2 2 2 1 0 2 2 2 0 1 0 2 1 0 2 0 2 0 2 0 2 0 2 0 1 1 2 1 1 2 2 0 1 1 2 1 2 0 0 1 2 2 2 2 0 1 1 0 0 2 2 0 2 1 2 2 0 0 1 2 2 1 2 1 1 2 0 2 0 0 1 1 2 1 2 0 0 0 1 2 2 1 1 2 1 0 1 0 0 2 2 2 2 0 2 2 2 0 1 2 0 0 1 2 0 0 0 0 2 2 1 2 2 2 2 2 2 0 2 2 1 1 1 0 2 0 1 0 2 0 1 2 1 2 2 0 2 2 2 0 2 2 0 2 2 2 1 0 0 0 2 2 0 1 2 0 0 1 1 2 2 2 1 0 2 1 0 2 1 1 2 0 1 1 1 1 2 0 1 0 2 1 0 2 0 2 2 1 1 0 0 2 1 1 2 2 0 0 1 2 0 1 2 2 1 2 0 1 0 1 0 2 2 0 1 2 1 1 2 0 2 2 1 0 0 2 1 1 1 0 0 2 0 2 2 0 0 0 2 0 0 1 2 2 0 2 0 2 2 1 1 2 2 0 2 1 2 2 2 0 1 2 1 2 2 1 2 2 1 1 0 0 2 2 1 2 0 1 1 1 2 2 1 0 1 2 2 1 1 1 2 2 1 0 0 2 1 2 2 2 2 0 1 1 0 0 1 1 2 1 2 1 1 1 1 2 0 1 2 2 0 0 2 2 1 1 0 2 2 0 1 0 1 2 2 0 1 1 1 0 1 1 1 1 2 2 2 1 0 1 2 2 2 1 1 0 2 0 2 2 0 2 2 1 2 2 1 0 1 1 0 0 2 2 1 0 2 0 1 0 0 2 2 2 2 2 1 1 1 0 2 2 1 1 0 Amplification Peak 22 20q13.12 chr20:42493784-43357898(probes 1440939:1441506) chr20:42732001-42772249(probes 1441148:1441180) chr20:40360028-63025520(probes 1439419:1453977) 1.1593e-13 3.7541e-08 0: t<0.1; 1: 0.10.9 1 1 0 1 2 0 1 2 2 0 1 2 0 1 0 2 1 1 1 1 0 1 1 1 0 2 2 1 2 0 2 2 0 2 0 0 2 2 1 2 2 0 2 2 1 2 2 2 0 2 0 0 2 0 0 2 2 2 2 1 0 2 2 2 0 1 0 2 1 0 2 0 2 0 2 0 2 0 2 0 1 1 2 1 1 2 2 0 1 1 2 1 2 0 0 1 2 2 2 2 0 2 1 0 1 2 2 0 2 1 2 2 0 0 1 2 2 1 2 1 1 2 0 2 0 0 1 2 2 1 2 0 0 0 1 2 2 1 1 2 1 0 1 0 0 2 2 2 2 0 2 2 2 0 1 2 0 0 1 2 0 0 0 0 2 2 1 2 2 2 2 2 2 0 2 2 1 1 1 0 2 0 1 0 2 0 1 2 1 2 2 0 2 2 2 0 2 2 2 2 2 2 1 0 0 0 2 2 0 1 2 0 0 1 1 2 2 2 1 0 2 1 0 2 1 1 2 0 1 1 1 1 2 0 2 0 2 1 0 2 0 2 2 1 1 0 0 2 1 0 2 2 0 0 1 2 0 1 2 2 1 2 0 1 0 1 0 2 2 1 1 2 1 1 2 0 2 2 1 0 0 2 1 1 1 0 0 2 0 2 2 0 0 0 2 0 0 1 2 2 0 2 0 2 2 1 1 2 2 0 2 1 2 2 2 0 1 2 1 2 2 1 2 2 1 1 0 0 2 2 1 2 0 1 1 1 2 2 1 0 1 2 2 1 1 1 2 2 1 0 0 2 1 2 2 2 2 0 1 1 0 0 1 1 2 1 2 1 1 2 2 2 0 1 2 2 0 0 2 2 1 2 0 2 2 0 1 0 1 2 2 0 1 1 1 0 1 1 1 1 2 2 2 1 0 1 2 2 2 1 2 0 2 0 2 2 0 2 2 1 2 2 1 0 1 1 0 0 2 2 1 0 2 0 1 0 0 2 2 2 2 2 1 1 2 0 2 2 1 1 0 Deletion Peak 1 1p36.11 chr1:26527443-27650365(probes 12465:12848) chr1:27089269-27150821(probes 12676:12687) chr1:1-37000884(probes 1:17551) 4.7302e-24 5.5492e-20 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 1 0 1 1 0 0 0 0 0 1 0 0 1 0 1 1 0 1 1 0 0 0 0 0 1 1 1 0 0 0 1 0 1 0 0 1 1 0 1 1 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 1 1 0 0 1 0 0 1 1 0 0 0 0 0 1 0 0 1 1 0 0 1 0 0 0 1 0 0 0 0 0 1 1 0 1 0 1 0 0 0 0 1 1 1 0 1 0 1 0 1 0 0 1 0 0 0 1 0 0 0 1 1 1 0 0 0 1 0 1 0 0 1 1 1 1 0 1 1 0 1 1 0 0 1 1 0 0 0 0 1 0 0 1 1 0 1 1 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 1 0 1 0 0 1 0 0 0 0 1 0 1 0 0 0 0 1 1 1 1 0 0 1 0 0 1 0 0 0 0 1 0 1 1 0 0 1 0 1 1 0 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 1 0 1 1 0 0 0 0 1 0 1 1 0 1 0 1 1 1 0 1 1 1 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 0 1 0 1 0 1 0 1 0 1 0 0 1 0 1 0 0 0 1 1 0 0 0 0 1 1 0 1 0 0 1 0 0 1 1 1 0 0 1 0 1 0 1 0 1 1 1 1 0 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 1 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 1 1 0 1 0 0 0 0 1 0 1 0 1 1 0 0 0 0 1 0 1 0 0 1 0 1 0 0 0 1 1 1 0 0 1 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 1 1 0 0 1 1 0 0 1 0 0 0 1 1 0 0 0 0 0 0 1 1 0 Deletion Peak 2 1p33 chr1:49615826-50514967(probes 24525:24818) chr1:48998362-50492467(probes 24067:24812) chr1:49197569-50591564(probes 24248:24863) 2.2676e-36 1.0923e-32 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 1 1 0 0 1 1 1 0 0 0 1 0 1 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 1 0 1 0 1 0 0 1 0 0 0 0 0 0 0 1 1 1 0 1 0 1 0 1 0 0 1 0 0 1 0 1 1 0 0 1 0 0 1 1 0 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 1 0 1 0 0 0 0 1 0 1 0 0 1 1 0 0 0 0 0 0 0 1 0 1 1 0 0 1 0 1 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 1 0 1 1 0 1 0 1 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 1 0 1 0 0 0 0 1 0 1 0 0 0 1 1 0 0 0 0 1 1 0 0 0 0 1 1 0 1 0 0 0 0 1 0 0 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 1 1 1 0 0 1 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 1 1 0 0 1 1 0 0 1 0 0 0 1 1 0 0 0 0 0 0 1 1 0 Deletion Peak 3 1p13.1 chr1:55527989-149898950(probes 27409:67528) chr1:116182955-116245149(probes 64826:64876) chr1:55274811-118633238(probes 27203:66405) 0.00038973 0.11059 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 1 0 1 1 0 0 0 1 0 1 0 0 0 0 0 1 0 0 1 0 1 0 0 0 1 1 1 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 1 0 0 1 0 1 1 0 0 1 0 0 1 1 0 0 0 0 1 0 0 1 1 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 1 0 0 1 0 1 0 0 1 0 1 0 0 0 0 1 0 1 0 0 0 1 0 0 1 0 0 0 0 1 0 0 1 0 0 1 0 1 0 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 1 0 1 1 0 1 0 1 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 1 1 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 1 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 1 1 1 0 0 1 0 0 0 0 0 0 0 1 1 0 0 1 0 0 0 1 1 0 0 1 1 0 0 1 0 0 0 1 1 0 0 0 0 0 0 1 1 0 Deletion Peak 4 2p21 chr2:40835958-45880121(probes 152297:155403) chr2:43447767-43457271(probes 153920:153921) chr2:43408218-43468744(probes 153895:153928) 0.15521 0.15543 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Deletion Peak 5 2q22.1 chr2:122037434-168815541(probes 192142:217210) chr2:140976294-142894275(probes 201264:202535) chr2:142042799-142047443(probes 201900:201901) 0.13394 0.13215 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Deletion Peak 6 3p26.1 chr3:1-21472074(probes 259399:270706) chr3:5215017-5277098(probes 261083:261098) chr3:1-7646729(probes 259399:262224) 0.010931 0.18021 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 1 0 1 1 1 0 0 0 0 0 0 0 0 0 1 1 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 1 1 0 1 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 1 1 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 1 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 1 0 Deletion Peak 7 3p14.2 chr3:59701447-61547330(probes 292622:293005) chr3:59701447-61238217(probes 292622:292819) chr3:46617312-61287139(probes 285666:292859) 4.0204e-33 2.1148e-32 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 0 1 1 1 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 1 1 0 1 0 1 0 0 0 0 1 0 1 0 1 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 1 1 0 1 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 1 1 0 0 0 0 0 0 0 1 0 1 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 1 0 1 1 Deletion Peak 8 3q26.31 chr3:174345545-175760559(probes 353555:354084) chr3:174148679-175760559(probes 353465:354084) chr3:174652143-174990763(probes 353753:353993) 1.8013e-23 1.8013e-23 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 1 0 Deletion Peak 9 4p16.2 chr4:1-10442121(probes 365353:370213) chr4:5953007-5996103(probes 367839:367883) chr4:5974229-5975173(probes 367862:367863) 0.14844 0.14841 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 1 0 1 1 0 1 1 1 0 1 0 0 0 0 1 1 0 1 1 1 0 1 0 0 1 1 1 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 1 0 1 1 0 0 1 0 0 1 0 0 0 0 0 1 1 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 1 1 0 1 0 0 1 1 1 1 1 1 1 0 1 1 0 0 1 1 0 0 0 0 1 1 0 1 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 1 0 1 0 0 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 1 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 1 0 1 0 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 1 0 0 0 0 0 1 1 0 0 1 1 0 0 0 0 1 1 0 0 0 0 0 1 1 1 0 1 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 1 1 0 0 1 1 0 0 0 0 0 0 1 1 1 0 0 0 1 0 1 1 0 Deletion Peak 10 4q22.1 chr4:91271445-93240505(probes 415178:416110) chr4:91035787-92525194(probes 415016:415797) chr4:91177072-92486642(probes 415095:415778) 8.2698e-48 3.7685e-45 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 1 0 1 1 0 1 1 0 0 1 1 0 0 0 1 1 0 1 1 1 0 0 1 0 1 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 1 1 0 0 1 0 0 1 0 0 1 1 1 1 1 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 1 0 0 0 0 1 0 1 1 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 1 0 1 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 1 1 1 0 0 1 1 0 1 0 0 0 1 0 1 0 1 0 0 0 1 0 0 1 0 0 0 0 0 1 1 1 1 1 0 1 0 0 1 0 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 1 0 1 1 0 1 0 0 0 1 0 1 0 0 0 0 0 0 1 1 0 1 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 1 0 0 0 0 1 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 1 1 1 0 0 0 0 1 0 1 1 0 0 1 1 0 0 0 0 1 1 0 1 0 1 0 1 1 0 0 1 0 0 1 0 1 0 1 0 1 1 1 0 0 0 0 0 0 0 0 0 0 1 1 0 0 1 0 1 1 0 0 1 0 0 0 0 0 1 0 1 1 0 0 0 0 1 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 1 0 0 1 0 0 1 1 1 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 1 1 0 0 1 1 0 0 1 0 0 0 1 1 1 0 0 0 1 1 1 1 0 Deletion Peak 11 4q35.1 chr4:179280062-186507186(probes 463142:466104) chr4:184549518-185142643(probes 465631:465675) chr4:152665525-191154276(probes 448212:467482) 9.6913e-19 4.6363e-15 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 1 0 1 1 0 1 1 0 0 1 1 0 0 0 0 1 1 1 1 1 1 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 1 0 1 0 1 1 1 0 0 1 0 0 1 0 0 1 1 1 1 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 1 1 0 1 0 0 1 1 1 1 0 0 0 0 0 0 0 1 0 1 1 0 1 1 0 0 1 0 0 0 0 0 1 1 0 1 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 1 1 1 0 0 1 1 0 1 0 1 0 1 0 1 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 1 1 1 1 1 1 0 0 1 0 1 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 1 0 1 0 0 1 0 0 1 1 0 0 1 0 0 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 1 1 0 0 0 0 0 1 0 0 1 0 0 0 1 0 1 0 0 1 0 0 0 0 1 0 1 0 0 0 0 1 0 1 0 0 0 0 0 1 1 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 1 1 1 0 1 0 0 1 1 1 1 0 0 1 1 0 0 0 0 1 1 0 1 0 0 0 1 1 0 0 1 0 0 1 0 1 0 1 0 1 1 0 1 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 1 1 1 1 0 0 0 1 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 1 1 0 0 1 0 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 1 1 0 0 1 1 0 0 1 0 1 0 1 1 1 0 0 0 1 1 1 1 0 Deletion Peak 12 5q12.1 chr5:58998410-59780946(probes 498964:499350) chr5:58260298-59818245(probes 498419:499375) chr5:50968997-134247063(probes 493742:539383) 8.0336e-27 1.5702e-24 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 1 0 0 1 1 1 0 1 1 1 0 0 0 0 0 1 1 0 0 1 1 0 1 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 1 1 1 0 1 1 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 1 1 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 1 0 0 1 0 0 1 0 1 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 1 1 0 0 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 1 0 1 1 1 0 0 0 0 1 0 1 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 1 0 0 1 0 0 1 0 1 1 0 0 0 Deletion Peak 13 5q21.1 chr5:90456284-108085742(probes 515629:524071) chr5:100135051-100243110(probes 519945:519993) chr5:50968997-134247063(probes 493742:539383) 1.1167e-13 0.00017919 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 1 0 0 1 1 1 0 1 0 0 0 0 0 0 0 1 1 0 0 1 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 1 0 1 0 1 1 1 0 1 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 1 1 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 1 0 1 1 1 0 0 0 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 1 1 0 0 0 1 0 1 0 0 0 1 1 1 0 1 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 1 1 0 0 0 0 0 1 1 0 0 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 1 1 0 1 1 1 0 0 0 0 1 0 1 0 0 0 1 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 1 1 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 1 0 1 0 0 1 0 1 1 1 0 0 0 0 1 1 0 1 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 1 0 0 1 1 0 1 0 1 1 0 0 0 Deletion Peak 14 5q22.2 chr5:109202065-114915080(probes 524653:528356) chr5:112222695-112230268(probes 526656:526657) chr5:50968997-134247063(probes 493742:539383) 9.3993e-19 5.8551e-07 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 1 0 0 1 1 1 0 1 0 0 0 0 0 0 0 1 1 0 0 1 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 1 0 1 0 1 1 1 0 1 0 0 1 0 0 0 0 0 0 0 1 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 1 1 0 0 0 0 1 0 0 1 0 1 0 1 1 0 1 0 0 0 0 0 0 0 0 1 1 0 0 0 1 0 1 0 0 0 1 1 0 0 1 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 1 1 1 1 0 0 0 0 0 0 1 0 0 1 1 0 0 0 1 0 0 0 0 0 1 0 0 1 0 1 1 0 0 1 0 0 1 1 0 0 1 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 1 1 1 0 1 0 1 0 0 0 0 1 0 1 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 1 1 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 1 0 1 0 0 1 0 1 0 1 0 0 0 1 1 1 0 1 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 1 0 0 1 0 0 1 0 1 1 0 0 0 Deletion Peak 15 6p25.3 chr6:1608837-2624052(probes 568026:568718) chr6:1621405-2252425(probes 568029:568445) chr6:1684657-2344621(probes 568071:568488) 7.1067e-19 7.0658e-19 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 1 0 1 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Deletion Peak 16 6q26 chr6:161693099-163153207(probes 659115:659758) chr6:161767520-163153207(probes 659156:659758) chr6:162128544-162136391(probes 659458:659459) 3.0351e-42 3.0351e-42 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 1 0 1 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 1 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 1 0 1 0 0 1 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Deletion Peak 17 7q31.1 chr7:110746146-111366370(probes 719616:719643) chr7:110236682-111354928(probes 719358:719637) chr7:110535012-110544716(probes 719498:719499) 4.5193e-05 4.44e-05 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Deletion Peak 18 8p23.2 chr8:1-4985851(probes 744494:746820) chr8:2784419-4854274(probes 745262:746674) chr8:1-35258655(probes 744494:764977) 4.4343e-09 4.189e-05 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 1 0 1 1 1 1 0 1 0 1 1 0 1 1 1 1 1 0 1 0 0 0 1 0 1 0 0 1 1 0 1 0 1 0 0 0 1 1 0 1 0 1 1 0 1 0 1 0 1 0 0 1 0 0 1 1 1 1 0 0 1 1 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 1 1 0 1 1 1 1 1 1 1 1 0 0 1 0 1 0 1 0 1 1 0 0 1 1 0 0 0 1 1 0 1 1 1 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 1 1 1 0 1 1 1 1 1 0 0 1 0 0 0 0 0 1 0 1 0 0 1 0 0 1 1 0 1 1 0 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 0 1 1 0 0 1 0 0 0 1 1 0 1 0 0 1 0 0 1 0 0 1 0 0 0 1 1 0 0 1 0 0 0 0 0 0 1 0 1 1 0 0 0 1 0 1 1 0 0 0 1 0 0 1 0 1 1 0 0 0 1 0 1 1 1 1 1 0 0 0 0 1 1 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 1 1 1 1 0 1 0 0 1 0 0 1 0 0 1 0 0 1 1 0 0 0 1 1 0 0 1 0 0 1 0 1 1 0 0 1 0 1 1 1 0 0 0 1 0 1 1 0 1 1 0 1 0 0 1 0 0 1 0 0 1 1 1 0 1 1 0 1 0 0 1 0 0 0 1 0 1 0 0 1 1 1 0 0 0 1 0 1 0 0 0 1 1 0 0 0 0 1 0 0 0 0 1 0 1 1 0 1 0 1 0 0 0 1 1 1 1 1 0 0 0 1 0 1 0 0 0 0 1 1 0 1 1 0 0 1 0 0 0 1 0 1 1 0 0 0 Deletion Peak 19 8p22 chr8:15092726-16722285(probes 751473:752476) chr8:15273726-15624424(probes 751591:751813) chr8:1-35258655(probes 744494:764977) 6.2829e-14 3.5237e-10 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 1 0 1 1 1 1 0 1 0 1 1 0 1 1 1 1 1 0 1 0 0 0 1 0 1 0 0 1 1 1 1 0 1 0 0 0 1 1 0 1 0 1 1 0 1 0 1 0 1 0 0 1 0 0 1 1 1 1 0 0 1 1 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 1 1 0 1 1 0 1 1 1 1 1 0 0 1 0 1 0 1 0 1 1 0 1 1 1 0 0 0 1 1 1 1 1 1 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 1 0 1 0 1 1 1 0 1 1 1 1 1 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 1 1 0 1 1 0 0 1 0 0 0 1 0 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 0 1 1 0 0 1 0 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 0 1 1 0 0 1 0 0 1 0 0 0 1 0 1 1 0 0 0 1 1 1 1 0 0 0 1 0 0 1 1 1 1 0 0 0 1 0 1 1 1 1 1 0 0 0 0 1 1 0 0 0 1 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 1 1 1 1 0 1 0 0 1 0 0 1 0 0 1 0 0 1 1 0 1 0 1 1 0 0 0 0 0 1 1 1 1 0 0 1 0 1 1 1 0 0 0 1 0 1 1 0 1 1 0 1 0 0 1 0 0 1 0 0 1 1 1 0 1 1 0 1 0 1 1 0 0 0 1 0 1 0 0 1 1 1 0 0 1 1 1 1 0 0 0 1 1 0 0 0 1 1 0 0 0 0 1 0 1 1 0 1 0 1 0 0 0 1 1 1 1 1 0 1 0 1 0 1 1 0 0 0 1 1 0 1 1 0 0 1 0 0 0 1 0 1 1 0 0 0 Deletion Peak 20 8q11.1 chr8:42883855-47750537(probes 769084:769209) chr8:42932479-47463861(probes 769100:769101) chr8:42933373-47464064(probes 769101:769102) 0.062382 0.065041 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Deletion Peak 21 9p21.3 chr9:21524354-22448737(probes 838793:839333) chr9:21959052-21977193(probes 839020:839021) chr9:21720944-22293598(probes 838867:839244) 0.037327 0.038253 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 1 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 1 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 Deletion Peak 22 10p15.3 chr10:1-5407870(probes 893272:896462) chr10:1-484158(probes 893272:893318) chr10:1-645915(probes 893272:893326) 0.12928 0.13215 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 1 0 1 0 0 0 1 0 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 1 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0 1 1 0 0 0 0 0 1 0 0 1 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 1 0 0 Deletion Peak 23 10q21.1 chr10:53057593-53461574(probes 923090:923392) chr10:52739810-54061437(probes 922838:923861) chr10:52828172-53946013(probes 922896:923783) 1.2521e-13 6.7884e-12 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 1 1 0 0 1 1 0 0 0 0 1 0 0 1 1 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 1 1 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 1 0 1 0 0 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 1 0 0 1 0 1 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 0 0 1 1 1 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 1 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 1 1 0 0 Deletion Peak 24 10q23.31 chr10:89313008-90348818(probes 944994:945780) chr10:89574877-89611620(probes 945180:945201) chr10:82660017-135534747(probes 940722:973762) 1.3301e-14 7.0964e-10 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 1 0 0 1 1 0 0 0 0 1 1 0 1 1 1 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 1 1 0 1 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 1 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 1 1 0 1 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 0 1 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 1 0 0 1 0 1 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 0 1 0 0 1 1 1 0 0 0 0 1 0 0 0 0 1 1 0 0 0 1 1 1 0 1 0 0 0 1 0 0 0 0 1 1 0 1 0 1 0 0 1 0 0 1 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 1 1 0 0 Deletion Peak 25 10q25.2 chr10:94837472-135534747(probes 948342:973762) chr10:114706629-114933610(probes 960510:960640) chr10:82660017-135534747(probes 940722:973762) 9.4741e-07 0.056768 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 0 0 0 1 0 0 1 1 0 0 0 0 1 1 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 1 1 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 1 1 1 1 0 0 1 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 1 0 0 0 1 0 0 1 0 1 0 1 1 1 0 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 1 0 0 1 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 1 0 0 1 1 0 0 0 0 1 1 1 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 1 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 1 1 0 0 Deletion Peak 26 12p13.2 chr12:6885077-18235892(probes 1054268:1060354) chr12:10158904-10242160(probes 1055563:1055609) chr12:10164843-10169939(probes 1055567:1055568) 0.087189 0.085979 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 1 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 1 1 0 0 Deletion Peak 27 13q14.13 chr13:34674944-71590578(probes 1133346:1153220) chr13:46524840-46627479(probes 1141006:1141046) chr13:46288869-46594021(probes 1140817:1141033) 0.24773 0.24516 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 Deletion Peak 28 14q31.1 chr14:58447798-107349540(probes 1200791:1229478) chr14:80940241-81428563(probes 1214479:1214760) chr14:81089876-81272421(probes 1214576:1214677) 0.050084 0.050533 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 1 0 0 1 0 1 1 1 0 0 0 0 0 1 0 1 1 0 1 0 0 0 1 0 1 1 1 1 0 1 0 0 1 0 0 0 0 0 1 1 0 1 0 1 1 1 1 0 1 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 1 0 1 1 1 0 0 0 1 0 0 1 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 1 1 0 0 0 0 0 1 1 0 1 0 1 1 0 0 0 1 1 0 1 0 0 1 0 1 0 0 1 0 0 0 1 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 1 0 1 1 0 0 1 1 0 1 1 0 0 0 0 1 0 0 0 1 1 1 0 1 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 1 1 0 0 1 1 0 1 0 0 1 0 0 1 0 0 0 0 1 0 1 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 1 0 0 1 1 1 0 0 0 1 0 1 1 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 1 0 1 1 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 0 0 1 1 0 0 0 1 1 0 0 1 0 1 1 0 1 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 1 0 0 0 1 0 1 1 0 1 0 0 0 0 1 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 1 1 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 1 0 1 0 0 1 0 1 1 0 0 0 0 0 0 1 1 1 0 Deletion Peak 29 15q11.2 chr15:1-40245778(probes 1229479:1237668) chr15:25576904-25691367(probes 1230350:1230394) chr15:1-48091682(probes 1229479:1241613) 1.0065e-06 0.026776 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 1 0 1 1 0 0 1 0 0 1 1 0 1 1 1 0 1 0 1 0 0 0 1 0 1 0 1 1 0 1 1 0 0 0 0 0 1 0 1 0 0 1 0 0 1 1 0 0 0 1 0 1 0 0 1 1 0 1 1 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 1 1 1 1 1 0 0 1 0 1 0 1 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 1 1 1 1 1 0 1 0 1 0 0 0 0 0 0 0 1 0 0 1 1 1 0 0 1 1 0 0 0 1 0 1 1 0 0 1 1 1 1 1 0 0 0 1 0 0 0 0 0 0 0 1 1 0 1 1 1 1 0 1 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 1 0 1 1 0 0 1 1 0 1 0 0 1 0 0 0 0 1 0 1 0 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 1 1 0 1 0 1 1 1 0 0 0 0 1 0 1 0 0 0 0 0 0 0 1 0 1 1 1 0 0 0 0 1 1 0 1 0 0 0 1 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 1 1 0 0 0 0 0 1 0 1 1 0 0 1 1 1 0 0 0 0 1 0 0 0 1 1 1 1 1 1 0 1 0 0 0 1 0 1 0 1 0 1 0 0 1 1 0 0 1 0 1 0 0 1 0 0 0 0 0 1 0 0 0 0 1 1 0 1 1 1 1 0 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 1 0 0 0 0 1 1 0 0 1 1 1 1 1 0 0 1 1 0 0 0 1 1 0 0 1 0 1 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 1 1 0 1 0 Deletion Peak 30 15q15.2 chr15:37383162-44164004(probes 1235730:1239430) chr15:42825889-42850446(probes 1238930:1238935) chr15:1-48091682(probes 1229479:1241613) 2.3878e-07 0.017793 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 1 0 1 1 0 0 1 1 0 1 1 0 1 1 1 0 1 0 1 0 0 0 1 0 1 0 1 1 0 1 1 0 0 0 0 0 1 0 1 0 0 1 0 0 1 1 0 0 0 1 0 1 0 0 1 1 0 1 1 0 1 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 1 1 1 1 1 0 0 1 0 1 0 1 0 0 0 0 0 1 0 0 1 0 1 0 1 0 0 1 1 1 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 1 1 0 1 0 1 0 1 1 0 0 1 1 0 1 1 0 0 0 1 0 0 0 0 0 0 0 1 1 0 1 1 1 0 0 1 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 1 0 1 1 0 0 1 1 0 0 0 0 1 0 0 0 0 1 0 1 0 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 1 0 1 1 1 1 0 0 0 1 1 1 0 0 0 0 0 0 0 1 0 1 1 1 0 0 0 0 1 1 0 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 1 1 0 0 0 0 0 1 0 1 1 0 0 1 1 1 0 0 0 0 1 0 0 0 1 1 1 1 1 1 0 1 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 0 1 0 1 0 0 1 0 0 1 0 0 1 0 0 0 0 1 1 0 1 1 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 1 1 0 0 1 1 1 1 1 0 0 1 1 0 0 0 0 1 0 0 1 0 1 0 0 1 1 0 0 1 0 0 0 1 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 1 1 0 1 0 Deletion Peak 31 15q21.1 chr15:44953604-45299932(probes 1239764:1239847) chr15:45001788-45013397(probes 1239778:1239787) chr15:1-48091682(probes 1229479:1241613) 2.5735e-07 0.010419 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 1 0 1 1 0 0 1 1 0 1 1 1 1 0 1 0 1 0 1 0 0 0 1 0 1 0 1 1 0 1 1 0 0 0 0 0 1 0 1 0 0 1 0 0 1 1 0 0 0 1 0 1 0 0 1 0 0 1 1 0 1 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 1 1 1 1 1 0 0 1 0 1 0 1 0 0 0 0 0 1 0 0 1 0 1 0 1 0 0 1 1 1 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 1 1 1 0 1 0 1 0 1 1 0 0 1 1 0 1 1 0 0 0 1 0 0 0 0 0 0 0 1 1 0 1 1 1 0 0 1 1 0 0 0 0 0 0 1 1 1 0 0 0 0 0 1 0 1 1 0 0 1 1 0 0 0 0 1 0 0 0 0 1 0 1 0 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 1 0 0 0 1 1 0 0 0 1 0 1 0 0 0 0 0 0 0 1 0 1 1 1 0 0 0 0 1 1 0 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 1 1 0 0 0 0 0 1 0 1 1 0 0 1 1 1 0 0 0 0 1 0 0 0 1 1 1 1 1 1 0 1 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 0 1 0 1 0 0 1 0 0 1 0 0 1 0 0 0 0 1 1 0 1 1 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 1 1 0 0 1 1 1 1 1 0 0 0 1 0 0 0 0 1 0 0 1 0 1 0 0 1 1 0 0 1 0 0 0 1 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 1 1 0 1 0 Deletion Peak 32 15q22.33 chr15:67067796-67494822(probes 1253684:1254024) chr15:67350488-67491246(probes 1253909:1254022) chr15:67347687-67520673(probes 1253908:1254037) 0.00010434 0.00024982 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 1 0 1 1 0 0 1 1 0 1 1 0 1 0 1 0 1 0 1 0 0 0 1 0 1 0 1 0 0 1 1 0 0 0 0 0 1 0 1 0 0 1 0 0 1 1 0 0 0 0 0 1 0 0 1 0 0 1 1 0 1 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 1 1 1 0 0 0 1 0 1 0 1 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 1 1 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 1 1 0 0 0 0 0 1 1 0 0 1 1 0 1 1 0 0 0 1 0 0 0 0 0 0 0 1 1 0 1 1 1 0 0 1 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 1 0 1 1 0 0 1 1 0 0 0 0 1 0 0 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 1 1 0 1 0 1 1 1 1 0 0 0 1 0 1 0 0 0 0 0 0 0 1 0 1 1 1 0 0 0 0 1 1 0 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 1 1 0 0 0 0 0 1 0 1 1 0 0 1 1 1 0 0 0 0 1 0 0 0 0 1 1 1 1 1 0 0 0 0 0 1 0 0 0 1 0 1 0 0 1 1 0 0 1 0 1 0 0 1 0 0 1 0 0 1 0 0 0 0 1 1 1 1 1 1 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 1 0 1 0 0 0 0 1 1 0 0 1 1 1 1 1 0 0 0 1 0 0 0 0 1 0 0 1 0 1 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 1 0 1 1 0 1 0 Deletion Peak 33 16p13.3 chr16:5144019-7780235(probes 1275346:1276822) chr16:6066397-7771745(probes 1275977:1276810) chr16:5410372-7683849(probes 1275520:1276692) 2.8781e-123 2.8781e-123 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 1 0 0 0 0 0 1 1 0 1 0 1 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 1 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 Deletion Peak 34 16q23.1 chr16:78098006-79031486(probes 1306649:1307398) chr16:78129058-79247026(probes 1306680:1307684) chr16:78407568-79170918(probes 1306924:1307580) 6.439e-33 6.439e-33 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 1 0 0 1 0 1 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 1 0 1 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 1 0 Deletion Peak 35 17p12 chr17:11060240-12456081(probes 1319361:1320375) chr17:11868808-11904146(probes 1320009:1320017) chr17:11434765-12032068(probes 1319705:1320088) 5.2506e-05 5.3312e-05 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 1 0 1 1 0 1 1 1 0 1 1 0 1 1 0 1 1 0 1 1 1 0 1 0 0 1 1 1 1 1 1 0 0 0 0 1 1 1 1 1 0 0 1 1 1 0 1 0 1 0 0 1 0 0 1 0 0 1 1 0 1 1 1 0 0 0 1 1 0 1 0 1 1 1 1 1 0 0 0 0 0 0 1 0 0 1 0 1 1 1 1 1 0 0 1 0 1 1 1 1 1 1 0 0 1 1 0 1 0 1 0 0 1 0 1 1 1 1 1 0 1 0 1 0 0 1 0 1 0 1 0 0 0 1 1 1 0 0 0 1 0 1 0 0 1 1 1 0 0 1 1 1 1 1 1 0 1 0 1 0 0 0 1 1 1 0 1 1 1 0 1 1 0 1 1 0 0 1 0 0 0 1 0 1 0 0 1 0 1 1 0 1 1 1 0 0 1 1 1 1 0 1 0 0 0 1 1 0 0 1 0 0 0 1 1 1 1 0 0 1 0 0 1 0 1 1 0 1 0 1 1 1 0 1 0 1 1 0 1 0 1 1 1 1 0 0 0 1 0 0 1 0 0 1 1 0 1 1 1 1 0 1 0 0 1 0 1 1 0 1 1 1 0 1 0 1 1 1 0 0 1 0 1 0 0 0 1 0 1 1 0 0 0 1 0 0 0 0 1 0 1 1 1 1 1 0 0 0 0 1 1 1 1 0 0 0 1 0 1 1 0 1 1 0 1 0 1 1 0 0 1 0 1 1 1 1 1 0 0 1 1 1 1 1 0 0 1 1 0 1 1 0 1 1 1 1 0 0 1 0 0 1 0 0 1 1 1 1 0 1 1 1 0 1 1 0 0 1 1 1 1 0 1 1 0 1 0 0 0 1 1 0 0 0 0 0 1 0 1 1 1 0 0 0 0 0 1 0 1 0 0 1 0 1 1 0 1 1 1 1 1 1 0 0 0 0 0 1 1 0 0 0 1 1 0 1 1 1 1 1 1 1 1 1 0 1 1 1 1 0 Deletion Peak 36 17q24.3 chr17:68173089-70642789(probes 1344772:1346696) chr17:70315293-70640081(probes 1346455:1346689) chr17:70396116-70499515(probes 1346533:1346596) 0.035214 0.035299 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 1 1 0 0 0 1 1 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0 1 0 0 0 0 1 0 0 0 0 Deletion Peak 37 18p11.31 chr18:3277692-5145388(probes 1352040:1353286) chr18:3569835-3575803(probes 1352212:1352214) chr18:3394680-3706587(probes 1352116:1352301) 0.041611 0.041729 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 1 1 1 1 0 0 1 1 0 1 1 0 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 1 0 1 1 0 1 1 0 1 1 1 0 1 0 1 1 0 1 1 1 0 1 0 0 1 0 0 1 1 1 1 1 0 1 1 1 0 0 0 1 0 0 1 0 1 0 1 1 0 0 1 0 0 1 1 1 0 1 0 0 1 1 0 1 1 0 0 1 0 1 1 1 0 1 1 0 0 1 1 0 1 0 1 1 0 0 0 1 1 1 1 1 0 1 0 1 0 0 0 0 0 0 1 0 0 0 1 1 1 1 0 1 1 0 1 0 0 0 1 1 1 0 1 1 1 1 1 1 0 0 1 1 0 0 0 0 1 1 0 1 1 1 1 1 1 0 1 1 0 0 1 0 1 0 1 0 1 0 0 1 0 1 1 0 0 1 1 0 1 1 0 1 0 0 1 0 0 0 0 1 0 1 0 0 0 0 1 1 1 1 0 0 1 0 0 1 0 1 1 0 1 0 1 1 1 0 1 0 1 0 0 1 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 0 1 1 1 1 1 0 0 0 1 0 1 1 0 0 1 0 0 1 0 1 1 1 0 0 1 0 0 0 0 0 1 0 1 1 0 0 0 1 0 0 0 0 1 1 1 0 1 1 1 0 1 0 0 1 0 1 1 0 0 1 1 1 1 0 0 1 1 0 1 0 0 0 1 1 1 1 1 1 0 1 1 1 0 0 1 1 0 1 1 0 1 1 0 0 1 0 0 1 1 1 0 0 1 0 0 1 0 0 1 1 1 0 0 1 1 1 0 1 0 0 0 1 0 0 1 0 1 1 0 1 0 1 0 1 0 0 1 0 0 1 1 1 1 1 1 1 1 0 0 1 1 1 1 0 0 1 0 0 1 0 1 0 0 1 1 0 0 0 0 0 0 1 1 1 0 1 1 1 0 0 0 1 1 1 1 0 1 1 0 1 1 1 1 0 Deletion Peak 38 18q12.2 chr18:36593175-39537209(probes 1369936:1371635) chr18:36783539-37388942(probes 1370026:1370280) chr18:34571738-78077248(probes 1368632:1393267) 1.7033e-16 7.2764e-06 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 1 1 1 1 0 1 1 1 0 1 1 0 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 0 1 0 0 1 1 1 1 1 0 0 1 0 1 1 0 0 1 0 0 1 0 0 1 1 1 1 1 0 1 1 1 0 0 0 1 0 0 1 0 1 1 1 1 1 0 1 0 0 1 1 1 0 1 1 0 1 1 1 1 1 0 0 1 0 1 1 1 1 1 1 0 0 1 1 0 1 0 1 1 0 1 0 1 1 1 1 1 0 1 0 1 0 0 0 0 0 0 1 0 0 0 1 1 1 1 0 1 1 0 1 0 0 0 1 1 1 0 1 1 1 1 1 1 0 0 1 1 0 0 0 1 1 1 0 1 1 1 1 1 1 0 1 1 0 0 1 0 0 0 1 0 1 0 1 0 0 0 1 0 1 1 1 0 1 1 1 1 0 0 1 0 0 0 1 1 0 1 1 0 0 0 1 1 1 1 1 0 1 0 0 1 0 0 1 0 1 0 1 1 1 1 1 0 1 1 0 1 0 1 0 1 0 0 0 1 1 0 1 1 0 0 0 0 0 1 1 1 1 1 1 0 0 1 0 1 1 0 0 1 1 0 1 0 1 1 1 0 0 1 0 1 0 0 0 1 0 1 1 0 0 0 1 0 0 0 0 1 0 1 1 1 1 1 0 1 0 0 1 0 1 1 0 0 1 1 1 1 0 0 1 1 0 1 0 0 1 1 1 1 1 1 1 1 1 1 1 0 0 1 1 0 0 1 0 1 1 0 1 1 0 1 1 1 1 0 0 1 0 0 1 0 0 1 1 1 1 1 1 1 1 1 1 1 0 0 1 1 1 1 0 1 0 0 1 0 1 1 1 1 0 1 0 0 1 1 1 1 0 1 1 1 0 0 1 1 1 1 0 0 1 0 1 1 0 1 1 1 1 1 0 0 0 0 0 0 1 1 1 0 1 1 1 0 0 0 1 1 1 1 0 1 1 0 1 1 1 1 0 Deletion Peak 39 18q21.2 chr18:48472083-48650073(probes 1377277:1377440) chr18:48491525-48616860(probes 1377280:1377435) chr18:34571738-78077248(probes 1368632:1393267) 2.7064e-27 9.3492e-21 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 1 1 1 1 0 0 1 1 0 1 1 0 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 0 1 1 0 1 1 1 1 1 0 0 1 0 1 1 0 1 1 0 0 1 0 0 1 1 1 1 1 0 1 1 1 0 0 0 1 0 0 1 0 1 1 1 1 1 0 1 0 0 1 1 1 0 1 1 0 1 1 1 1 1 0 0 1 0 1 1 1 1 1 1 0 1 1 1 0 1 0 1 1 0 1 0 1 1 1 1 1 0 1 0 1 0 0 0 0 0 0 1 0 0 0 1 1 1 1 0 1 1 0 1 0 0 0 1 1 1 0 1 1 1 1 1 1 0 0 1 1 0 0 0 1 1 1 0 1 1 1 1 1 1 0 1 1 0 0 1 0 0 0 1 0 1 0 1 0 0 0 1 0 1 1 1 0 1 1 1 1 0 0 1 0 0 0 1 1 0 1 1 0 0 0 1 1 1 1 1 0 1 0 0 1 0 0 1 0 1 0 1 1 1 0 1 0 1 1 0 1 0 1 0 1 0 0 1 1 1 0 1 1 0 0 0 1 0 1 1 1 1 1 1 0 0 1 0 1 1 1 1 1 1 0 1 0 1 1 1 0 0 1 0 1 0 0 0 1 0 1 1 0 0 0 1 0 0 0 0 1 0 1 1 1 1 1 0 1 0 0 1 0 1 1 0 0 1 1 1 1 0 0 1 1 0 1 0 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 0 0 1 0 1 1 0 1 1 0 1 1 1 1 0 0 1 0 0 1 0 0 1 1 1 1 1 1 1 1 1 1 1 0 0 1 1 1 1 0 1 1 0 1 1 1 1 1 1 0 1 0 0 1 1 1 1 1 1 1 1 0 0 1 1 1 1 1 0 1 0 1 1 0 1 1 1 1 1 0 0 1 0 0 0 1 1 1 0 1 1 1 0 1 0 1 1 1 1 0 1 1 0 1 1 1 1 0 Deletion Peak 40 18q22.1 chr18:63200038-67073349(probes 1386625:1388412) chr18:66338558-66383463(probes 1387956:1387989) chr18:34571738-78077248(probes 1368632:1393267) 8.975e-18 0.0035391 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 1 1 1 1 0 0 1 1 0 1 1 0 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 0 1 1 0 1 1 1 1 1 0 0 1 0 1 1 0 1 1 0 0 1 0 0 1 1 1 1 1 0 1 1 1 0 0 0 1 0 0 1 0 1 1 1 1 1 0 1 0 0 1 1 1 0 1 1 0 1 1 1 1 1 0 0 1 0 1 1 1 1 1 1 0 1 1 1 0 1 0 1 1 0 1 0 1 1 1 1 1 0 1 0 1 0 0 0 0 0 0 1 0 0 0 1 1 1 1 0 1 1 0 1 0 0 0 1 1 1 1 1 1 1 1 1 1 0 0 1 1 0 0 0 1 1 1 0 1 1 1 1 1 1 0 1 1 0 0 1 0 1 0 1 0 1 0 0 0 0 0 1 0 1 1 1 0 1 1 1 1 0 0 1 0 0 0 1 1 0 1 1 0 0 0 1 1 1 1 1 0 1 0 0 1 0 0 1 0 1 0 1 1 1 0 1 0 1 1 0 1 0 1 0 1 0 0 0 1 1 0 1 1 0 0 0 1 0 1 1 1 1 1 1 0 0 1 0 1 1 1 1 1 1 0 1 0 1 1 1 0 0 1 0 0 0 0 0 1 0 1 1 0 0 0 1 0 0 0 0 1 0 1 1 1 1 1 0 1 0 0 1 0 1 1 0 0 1 1 1 1 0 0 1 1 0 1 0 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 0 1 1 0 1 1 0 1 1 0 1 1 1 1 0 0 1 0 0 1 0 0 1 1 1 1 1 1 1 1 1 1 1 0 0 1 1 1 1 0 1 1 0 1 1 1 1 1 1 0 1 0 0 1 1 1 1 1 1 1 1 0 0 1 1 1 1 1 0 1 0 1 1 0 1 1 1 1 1 0 0 0 0 0 0 1 1 1 0 1 1 1 0 1 0 1 1 1 1 0 1 1 0 1 1 1 1 0 Deletion Peak 41 19p13.3 chr19:1033227-1907478(probes 1393386:1393547) chr19:1517293-1537245(probes 1393499:1393502) chr19:1-5160912(probes 1393268:1394395) 7.5925e-05 7.3024e-05 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 1 0 1 1 1 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 Deletion Peak 42 20p12.1 chr20:14301156-15274325(probes 1425703:1425930) chr20:13965126-16036135(probes 1425538:1426651) chr20:1-17164920(probes 1416965:1427679) 3.768e-42 3.768e-42 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 1 0 0 1 1 0 0 1 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 1 1 1 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 1 1 1 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 1 0 1 1 1 1 1 0 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 1 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 1 1 1 0 Deletion Peak 43 21q11.2 chr21:1-26470028(probes 1453978:1460720) chr21:1-15377835(probes 1453978:1453978) chr21:1-24936912(probes 1453978:1459629) 9.899e-05 0.00010149 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 1 1 0 0 1 1 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 1 0 1 0 0 0 0 0 0 0 1 1 0 1 1 0 0 1 0 0 1 0 1 1 0 0 0 0 0 0 0 0 1 0 0 1 0 1 0 1 0 0 0 1 0 0 1 1 0 0 1 0 0 1 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 1 0 1 1 0 0 1 0 0 0 0 0 1 0 1 0 1 1 1 0 1 1 0 0 0 1 0 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 1 1 0 0 0 1 0 0 1 1 1 0 0 1 0 0 0 0 0 0 0 0 1 0 1 0 1 1 0 1 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 1 1 1 0 0 1 0 1 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 1 1 0 1 0 1 0 1 0 1 0 1 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 1 0 0 1 0 0 0 1 1 1 0 1 0 0 1 0 1 0 1 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 1 1 1 1 0 0 1 0 0 1 0 0 0 0 0 0 1 1 0 1 1 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 0 1 1 1 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 0 0 0 0 0 1 1 0 0 1 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 1 0 0 Deletion Peak 44 22q13.32 chr22:48668761-51304566(probes 1490636:1491119) chr22:48883082-49288257(probes 1490825:1491089) chr22:49067526-49108537(probes 1490940:1490961) 0.00060241 0.00057513 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 1 0 1 1 0 1 1 1 0 0 0 0 0 1 1 1 1 1 1 0 0 0 1 0 1 1 0 0 1 1 1 0 1 0 0 0 0 0 1 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 1 0 0 1 0 1 1 0 1 0 0 0 0 0 0 0 1 0 1 1 0 0 1 1 1 0 0 0 0 0 1 1 0 0 0 1 0 0 1 0 0 1 0 0 0 0 1 0 1 0 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 1 1 1 0 0 1 1 0 1 0 0 1 1 1 1 0 1 1 1 1 1 1 0 1 1 0 0 0 0 1 0 0 1 1 0 1 1 0 1 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 1 1 0 1 1 1 0 0 1 0 0 0 0 0 0 0 0 0 1 0 1 1 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 1 0 0 1 0 1 0 0 1 0 1 0 1 1 0 0 0 1 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 1 0 1 1 0 1 1 1 1 0 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 1 0 1 0 0 1 0 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 1 1 0 1 0 0 1 0 1 0 0 0 1 1 1 1 0 0 1 0 0 1 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 1 1 1 0 1 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 1 1 0 0 1 1 0 0 0 0 0 0 1 1 0 0 1 1 1 0 1 0 0 0 0 1 1 0 0 0 1 1 0 0 0 Amplification Peak 1 - CN values 2q33.1 chr2:199627908-199644614(probes 233909:233921) chr2:199629487-199644600(probes 233910:233920) chr2:199629487-199645068(probes 233910:233923) 0.16176 0.16176 Actual Copy Change Given 0.28992 -0.0091286 0 0.20947 0.043023 0.0016642 0.046559 0.38493 0.21576 0.00041593 0.059992 0.032563 -0.0010157 0.051956 0.012237 -0.0068856 0.01419 0.0074587 -0.0095426 -0.0067813 -0.0031859 0.0026357 -0.38526 0.2151 0.0073609 0.21938 0.18946 0 0.78775 0 0.23736 0.018936 -0.0048461 -0.021921 -0.00027724 -0.0040162 0.33464 0.37331 0.0063871 0.012376 0.090285 -0.0027707 -0.0084385 0.021463 0.21963 -0.057881 0.0091705 0.64135 0.019223 0.22731 0.0013868 0.0077783 0.0038854 0.00097064 0.4374 -0.0015243 0.0038854 0.035665 0.00049704 0.039478 0.010069 0.016286 0.068378 0.6078 0.00099937 0.033972 0.00597 -0.24392 0.011539 0.0012481 0 8.5394e-05 0.017264 -0.013127 0.40298 -0.40937 0.00083195 0 0.00069327 -0.013127 0.008892 -0.0013858 0.33752 0.24461 0.64521 -0.0067813 0.030889 -0.0049844 0.089996 -0.021444 -0.031629 0.0046283 0.0064286 -0.0080695 0.00041593 -0.023018 -0.0073339 -0.29556 -0.01106 0.10322 0.0081273 -0.016567 -0.00015526 0 0.012237 -0.42374 -0.020165 0.0015255 0.14315 0.0012481 0 0.54764 -0.0056757 -0.0066432 0.22176 0.18404 0.02525 0.080852 -0.11325 -0.00041585 0.71991 0.097688 0.071162 0.0084743 -0.0066432 -0.0089906 0.14495 0.35888 0.49147 0.011679 0.023121 -0.004271 0.020063 0 -0.0030475 0.080522 -0.41245 0.024995 0.0020805 0 -0.16688 -0.014464 0.38617 1.8687 0 -0.0054758 0.041955 0.032902 0.0015255 -0.0011087 0.015587 0.20137 -0.013831 -0.010884 0.10628 0.0012481 0.0062864 0.0020993 -0.23887 -0.044264 -0.01354 -0.0011554 0.0080567 -0.036145 -0.0019399 -0.0038779 0.065942 0.02807 0.50678 0.0483 -0.03698 -0.012337 -0.094592 0.0053951 1.2156 -0.033405 0.031017 0.082765 0 0 0.026514 -0.0080244 -0.023772 -0.0123 -0.0051227 -0.014503 -0.0071958 -0.0098939 -0.012625 0.0077783 0 -0.005814 -0.031496 1.4524 0.035242 0.0080567 -0.018765 0.075615 -0.0099565 0 0.017544 0.57273 -0.0044312 0.00027728 0 0.00027728 0.87328 0 -0.0051227 0.31675 -0.024114 7.9153e-05 -0.013264 0.067248 0.78891 -0.0066432 0 -0.018553 0.0096491 -0.0036011 0 0 -0.0010633 0 0.0043021 0.13184 0.35964 0.00458 0.024829 0.012516 0.15517 0.15591 0.25081 -0.0029537 0.10074 0.008892 0.54294 -0.015977 0 0.077862 0.00458 0.21392 0.0015255 -0.012351 0.18228 0.0033299 0.0020805 -0.03817 0.0065262 0.011539 0.35296 0.0044411 0.0058309 0.00597 0.06494 -0.010596 0 0.20167 0.0094056 -0.0092666 -0.017632 -0.00013862 0.004719 -0.0044547 0.0023581 0.037076 0.01419 -0.0095218 0 -0.0013858 0.15159 0 0.016985 0 0.087969 0.015168 -0.4163 0.75501 0.319 -0.00027724 0.057939 0 -0.0067106 0.0034687 0.44105 0.0054139 0.02905 0.013557 -0.0048461 0.39872 0.11286 0 0.012934 0.0086135 -0.0038593 -0.00055444 0.0064738 0.0056969 0.00069327 -0.010646 0 0.25824 -0.0095426 0.014899 0.19184 0.033127 0 -0.014458 -0.010784 0.00013863 0.3913 0 -0.0013858 0.75318 0.49874 0.00082162 0.12226 0.15323 -0.00069303 0.58417 0.25533 -0.0033243 0.074426 0.05645 0.0027745 0.0043021 -0.0018151 0.025747 0.050392 0.024127 0 0.017124 9.3538e-05 0.27947 0.0072217 -0.00013862 -0.0123 0.62661 0.0048579 0.0055529 0.044148 0.003954 0 -0.011809 -0.0070909 0 0.69465 0.48057 -0.0087146 0 -0.0076101 0.34258 0.0062481 -0.00017257 -0.0045695 -0.012576 0.051814 0 0.0011093 0.055515 0.00097064 0.0015255 0 0.0093098 0.013772 3.2318 -0.00069303 -0.013337 -0.020549 -0.10132 -0.084528 0.0040243 -0.013953 0.42867 0.039337 0.0012624 0.00027728 0.12108 -0.0013858 -0.0014038 0.60765 0.7467 0.00055459 0.00027728 1.1859 0.0036076 0.042732 0.0063871 -0.019925 0.37891 -0.29886 -0.0029178 -0.00069303 -0.0016629 0 0.028652 0.20439 0 -0.0087146 0.0038565 0.019257 0.03369 -0.0099884 0 0 0.0005358 -0.017666 0.41546 -0.053746 0.0062481 0.4553 0.0030522 -0.0012473 0.0016642 0.0033299 -0.021921 0.016146 0.53713 0.36117 0.0026357 0.0097276 0.025531 0.0013868 0.003191 -0.0087762 0.0030621 0.00055459 0 0.017963 -0.061958 0.11976 0.50077 0.19364 -0.018503 -0.011684 0.019223 -0.0017802 0.033408 0.47238 0.373 -0.0039643 0.017932 0.45751 0.84948 0.00597 0 -0.026441 0.23562 0.15595 0 -0.00013862 Amplification Peak 2 - CN values 5p13.2 chr5:27059148-50133343(probes 483024:493292) chr5:37373774-37667439(probes 488874:488896) chr5:33433425-44944345(probes 486870:493141) 0.030224 0.030224 Actual Copy Change Given 0.30729 0.01433 -0.028916 0.34096 -0.83211 -0.0024938 0.32511 -0.15905 -0.22392 -0.0062286 0.16971 0.27971 -0.021098 -0.035808 -0.71533 0.33031 0 0.15876 -0.12311 -0.055095 0.00458 0.32995 -0.011887 0.18658 -0.0042929 -0.38022 -0.17383 0.76849 -0.027945 -0.0076101 -0.015466 -0.5226 -0.0013858 -0.018765 0.0036076 -0.0063345 -0.014916 -0.01168 -0.16434 0 -0.0083005 0 -0.071374 -0.36159 -0.27066 0.4294 0.25121 -0.018007 0 -0.15873 -0.0048461 0 0.031999 -0.00027724 -0.014028 0.0079175 -0.042681 -0.27476 0.54605 -0.0048461 -0.012162 -0.0087146 -0.0056757 -0.0029091 -0.014228 0 0.0040243 0.057593 0.0027745 -0.0077482 0.0020805 -0.0092842 0.0053724 -0.016017 -0.020047 0.011539 -0.011701 -0.0145 -0.0011087 -0.0092666 -0.012713 0.00027728 -0.021647 -0.010829 -0.040402 0.68887 0.71847 0.0064612 -0.038714 0.00020508 -0.036398 1.0013 0.41401 -0.0040162 -0.0044312 0.048546 -0.014366 0.69297 -0.043546 -0.0031859 0.016845 -0.022332 -0.11098 -0.010508 -0.0042929 0.61118 -0.013567 -0.0026767 -0.2251 -0.0083005 0.53538 -0.067647 0.00027728 0.48111 0.19269 0.64194 0.91703 -0.00090235 -0.045364 0.0015293 -0.027808 0.036653 -0.0013297 -0.013815 -0.016567 0.25668 -0.27929 -0.010508 -0.016017 0.00041593 0.0055284 -0.0091286 0.00041593 0.0011093 0.0075 -0.46398 1.1978 0.84104 -0.0036011 -0.016848 0.078871 -0.0080244 -0.52297 -0.015546 3.6569 0 1.2377 -0.01128 0.034113 0 0.28707 1.1162 -0.04113 -0.01047 0.2176 0.0079175 -0.013364 -0.026279 0.089625 -0.12185 -0.013264 -0.0051227 -0.0077482 0.0050609 -0.032041 -0.012396 1.2185 0.5419 -0.031565 0.16265 -0.018937 -0.034804 0.37686 -0.0012659 0.03031 0.031718 -0.014913 -0.0078863 0.012207 -0.0051227 0.00013863 0.0049969 -0.015191 -0.0037395 0.53872 -0.017598 0.0051359 -0.017604 0.019032 -0.60274 -0.29662 -0.0096328 -0.029994 -0.0041546 0.76216 -0.0063668 -0.019863 0.025725 0.29048 0.029044 0.0062481 -0.011335 0.020903 -0.00069303 -0.0030475 -0.0064719 -0.00055444 -0.35909 -0.0084385 0.0022193 -0.015191 0.003548 -0.00013862 0.78119 0.45956 -0.0123 0.13418 -0.070167 -0.013066 -0.024467 1.5162 -0.013731 0.042779 0.36428 -0.0023553 -0.012438 -0.027311 -0.0081517 -0.0040162 0 0.10833 -0.18219 -0.013616 -0.00055444 -0.36289 -0.0050056 0.65921 0.012637 0.64653 0.042024 -0.0029091 -0.20311 -0.01409 -0.0078863 0.6971 -0.013677 -0.0036011 -0.10079 0.016324 -0.0022168 0.70116 -0.029448 -0.023316 -0.00027724 -0.077478 0.01561 -0.0070062 0.017397 -0.016292 -0.031632 -0.18383 0.2939 -0.0066432 0.75627 -0.0044312 -0.0098185 -0.00079525 0.57368 -0.2049 -0.029358 0 1.8871 0.52398 -0.013953 0.06537 -0.012713 0.050961 -0.028139 0 0.016565 -0.010094 0.051956 -0.011473 -0.019314 -0.0027707 0 -0.015329 0.75594 -0.016208 -0.029311 -0.23643 -0.0060904 0.0013868 0.0084743 -0.0066432 -0.0016629 -0.0052964 -0.014105 -0.0055375 0.47615 0.00458 -0.17929 -0.017666 0.33757 -0.29964 -0.31961 -0.01354 -0.0087146 0.34502 -0.0051227 -0.26288 -0.096004 -0.13458 -0.022469 0.50377 -0.0020887 0.34112 0.2686 0.017824 -0.024251 0.25683 -0.0099565 0.5189 0.056308 -0.0060904 -0.60032 -0.0008316 0.02511 0.052436 0 0.36166 -0.065581 -0.088109 0 -0.0098185 0.40878 -0.029311 -0.051046 0.015866 -0.0001229 1.3253 -0.0031176 0.049114 0.0020199 0.027076 -0.10946 0.034536 0.51717 -0.036354 -0.029111 -0.01205 0.19786 0.0024969 -0.44967 -0.18509 0.6197 -0.46174 0.0011093 -0.013127 0.33658 0.0027745 0.41999 0.11653 -0.021954 -0.021784 -0.0053992 -0.010646 -0.03885 -0.0098185 0.0027745 0.019223 0.35218 0.00083195 0.33836 0.0076392 -0.0065353 -0.0094046 -0.0123 -0.0052509 0.44491 -0.00436 0.031718 -0.0085766 -0.005814 -0.00013862 -0.0029091 -0.0013858 0.77772 0.42043 -0.17516 0.22269 -0.0022168 -0.00055444 -0.0089906 -0.0080244 -0.037597 0.2568 -0.0051227 -0.0031859 -0.050641 0.033127 0 -0.021784 0.44884 0.0013396 -0.0041546 -0.01409 -0.47712 0.13619 -0.020138 -0.040345 0 -0.49204 -0.0029091 -0.02562 -0.017116 -0.021921 -0.041431 -0.021921 -0.017803 0.0040243 -0.38509 -0.0081624 -0.0022168 -0.010094 -0.0016629 -0.0059522 0.00013863 0.93813 0.66919 0.1492 -0.012106 -0.13764 -0.52074 -0.0075793 -0.0027707 0.006861 -0.021559 0.41865 -0.014142 0.0026878 -0.43767 -0.031632 -0.017666 0.85442 -0.0024938 -0.10841 0.26435 0.0041632 0.010982 -0.0042929 Amplification Peak 3 - CN values 6p21.1 chr6:40092319-44407505(probes 590921:593582) chr6:41613089-41614928(probes 592099:592103) chr6:40092332-44416987(probes 590922:593584) 0.005341 0.005341 Actual Copy Change Given -0.0098185 0 -0.022896 0.01276 0.056896 -0.0056757 -0.20783 0.010296 -0.14881 0.0020805 0.096089 0.20451 0.0056919 -0.030813 0.010842 0.26891 0.0030792 -0.058604 -0.010646 0.013363 0.013213 0.00013863 -0.43127 0.0085768 0.00055459 0.5953 0.030836 0.27426 -0.023429 -0.0051227 0.2355 0.11081 0.0011093 0.0051359 0.0052749 0.00048337 -0.020325 0.0090312 0.0072217 0.5788 -0.011257 -0.00055444 0.26122 0.74556 -0.16457 0.39645 0.085943 -0.014812 0.0048937 0.1437 -0.00097017 0.0034687 -0.10053 0.0026357 -0.0038153 0 0.97626 0.0076392 0.026315 -0.0041546 -0.018767 -0.0095426 -0.0030475 -0.0034278 0.010757 0.0037465 0.0033839 0.027914 0.0083351 0.0040243 0.0416 0.0039372 0.02525 0.024268 -0.017438 0.018803 -0.00069303 0.0044252 -0.012885 0.0040243 0.00021201 0.013772 0.010251 0.42593 0.7042 0.013632 0.55257 0.0049969 -0.039937 -0.011269 0.017687 0.28735 0.44771 0.0026357 0.0049969 -0.033307 0.0015255 -0.0036011 2.6686 0.17242 -0.039664 -0.018901 0.017507 0.0038854 0.0055529 -0.17462 -0.023806 -0.0029605 -0.005903 0.0024969 0.0068509 0.60063 0.0011696 -0.019177 -0.00041585 -0.056577 -0.0082383 -0.26667 -0.035176 0.024268 -0.023292 0.59512 -0.0022992 -0.0091286 0.0027745 -0.14875 0.12979 0.39263 0.52836 -0.031487 0 0.014892 -0.014916 -0.0052945 -0.38179 -0.43957 0.081553 -0.0031603 -0.0063668 0.4372 0.11594 -0.019995 -0.02151 -0.0065737 0.0087528 -0.0094046 -0.0035304 -0.1165 0.034959 0.022725 -0.055769 0.1102 0.5071 0.051142 0.19299 -0.23924 0.0052462 0.34829 -0.30674 -0.53793 0.0065262 -0.044363 -0.0081624 0.062288 0.5455 0.00079852 -0.2463 0.58508 -0.018902 -0.040616 0.033499 -0.014953 -0.021321 0.0035603 -0.0076101 0.22296 0.47581 0.00041593 0.31565 -0.0038779 3.6569 0.0048579 -0.010232 0 0.46007 -0.16548 -0.01037 0 -0.0080741 3.6569 0.098997 0.001803 0.0070826 0.0043021 -0.0089906 0.0066653 -0.0045695 0.046755 0.0070869 0.037782 0.003191 3.3295 0 -0.00081196 0.0011093 0.0024969 -0.00041585 0.058224 -0.0022168 -0.47986 -0.013402 0.11676 0.00048284 -0.036946 0.45652 0.0871 0.025926 -0.011123 -0.011964 0.00597 0.064798 -0.0063668 -0.0048008 0.37907 0.019643 0.0019418 -0.019047 0.0022193 -0.0063668 -0.00013862 -0.16307 0.17902 0.082974 0.0013868 0.10731 0.0029133 -0.16103 0.0082391 -0.0073339 0.10482 0.0012481 0.099433 0.13924 -0.014297 0.51717 -0.00017532 0.00069327 0.27363 -0.0053992 0.0013868 -0.028933 -0.00027724 0.0041632 -0.00097017 0.021043 -0.15059 -0.0018014 -0.016908 0.012813 0.51996 0.14995 0.0062481 -0.012851 -0.0062071 0 0.085799 0.0052749 0.0012689 0.022585 -0.0042929 -0.48079 -0.020138 -0.56416 -0.23227 -0.26913 -0.013127 -0.0051227 -0.0091869 0.029044 -0.00013862 0.026935 0.77272 0.045424 -0.022469 -0.0020784 -0.0015243 0.72603 0 0.001803 0.39994 -0.23264 0.0034687 0.0052749 0.0029133 0.010982 0.0029133 0.0039887 -0.0089857 -0.0043975 -0.0049844 0.011261 0.25043 -0.011198 0.27055 1.1838 0.05025 0.56667 0.32286 0.39463 -0.0038779 0.23193 0.093389 0.23318 -0.017116 -0.011611 0.018792 -0.041702 -0.082137 -0.018353 0.0030522 -0.0030012 -0.0036011 0.19891 0.16882 -0.010094 -0.00013862 -0.00055444 0.046275 -0.17436 0.02539 -0.21849 -0.0084385 0.0013148 -0.46589 0.0079175 0.41212 0.0049969 0.12948 -0.21698 0.0026357 -0.29236 -0.0074857 0.1963 -0.0047683 0.51664 0.00597 -0.018181 0.56667 0.44088 0.0024969 -0.010554 0.18677 -0.00069388 0.32378 0.022865 -0.016979 0.14816 0.0033299 -0.0012473 0.52713 0.00055459 0.0016642 0.11535 -0.012162 -0.0071958 -0.012713 0.0065262 0.0012481 -0.01179 -0.0040023 3.5071 0 0.010146 0.75051 0.029044 -0.0081481 0 -0.0049844 0.00041593 0.09321 0.77685 0.06084 -0.0056757 0 -0.0069195 -0.0034627 0.60214 1.5147 0.41061 0.50794 0.25686 -0.0051227 -0.005261 0.35104 -0.0073339 0.035695 0.45645 0 0.013632 0.034536 -0.12092 0.0056919 0.53526 -0.010094 -0.0023553 -0.00097017 0.70588 0.028763 0.57487 0 -0.03885 -0.00055444 -0.013402 -0.0016083 -0.0094046 -0.014641 0.004719 0.25699 0.34182 -0.0048461 0.010982 0.022444 -0.0020784 -0.0023918 0.0054139 -0.0026322 -0.0046184 0.0037465 0.35169 0.52101 -0.053206 -0.0027707 0.0011498 0.30726 -0.003155 0.00089005 0.021463 0.024653 0.49268 0.003191 0.011452 0.042632 0.4657 -0.0026322 -0.0051227 0.0022193 0.39509 0.26954 0.019503 0.037359 -0.0057174 Amplification Peak 4 - CN values 8p11.23 chr8:38170522-38243864(probes 766411:766423) chr8:38204653-38237933(probes 766420:766422) chr8:36067374-48753302(probes 765388:769576) 3.4683e-13 4.9127e-11 Actual Copy Change Given 0.32882 -0.8646 1.278 -0.54905 -0.82675 -0.29674 1.0205 0.14064 -0.61901 0.00013863 -0.23851 2.8467 -0.013285 3.0968 -0.71826 -0.39493 -0.64546 0.22407 0.22283 -0.69124 0.0016041 0.0052749 -0.022881 0.21825 0 -0.4097 -0.041467 0.21693 3.6569 -0.31494 0.01363 -0.068402 -0.0067813 0.038347 0 -0.0037395 0.40761 0.49147 0.74778 0.00029531 -0.028491 -0.0037382 -0.39375 0.54612 0.32553 -0.15108 0.032845 -0.01206 0 -0.18572 -0.0099565 -0.0040162 0.12918 -0.0019399 0.0010333 -0.81046 -1.0243 0.81981 -1.1543 -0.013953 -0.0016629 -1.108 1.4834 0.71622 0.8296 -0.0081624 0.00071221 0.13888 0.68124 -0.0016629 -0.38392 -0.002506 0.013719 -0.68606 0.41988 0.0016642 0.72225 0.00089284 0.61118 0.00041593 0.51037 -0.001304 -0.39886 -0.35286 0.67963 1.3258 0.52512 -0.0063668 -0.79009 0.29477 -0.7001 -0.43423 -0.49253 -0.006488 -0.0048461 -0.0092666 0.87468 -1.0598 0.096884 0.71754 -0.0037395 0.65663 0.51852 0.77349 0.70101 -1.0744 0.7627 -0.0041546 0.8656 0.0036076 0.48664 -0.016898 -0.0049398 0.5935 0.10264 0.27616 2.5293 -0.77239 -0.03245 0.41346 0.74575 0.083776 -0.0042369 0.38245 0.53485 0.23878 0.31842 -0.010094 0.28101 -0.016292 -0.004179 -0.00055444 -0.0041752 0.0030522 0.018243 0.42612 -0.47131 -0.013877 0.00597 0.38891 0.089416 0.042449 -0.57851 0.57816 0.024127 -0.0011261 -0.075006 2.5978 0.66882 0.0021919 -0.46089 0.55974 -0.57701 -0.02941 0.61154 0.22403 0.0010089 -0.56534 0.47907 0.55011 -0.0099007 -0.0031859 -0.0019399 0.0056169 -0.027124 -0.58451 0.090518 0.00070366 -0.018078 0.05694 -0.010756 1.1097 -0.59935 -0.012226 0.92369 -0.048748 -0.025519 -0.012156 -0.33017 -0.00027724 -0.045228 -0.009764 -0.29005 -0.0055414 -0.84363 0.015447 0.86295 -0.027473 0.026182 0.0040601 0.08673 0.64268 -0.90373 -0.031275 0.17702 -0.0023553 -0.024661 -0.020908 0.32576 0.016845 -0.8103 -0.015054 -0.58096 -0.0011087 -0.0048461 -0.01409 2.656 -0.34182 -0.006505 -0.0031859 0.94037 0.020843 0.0027745 0.72305 -0.82301 0.020063 0.011792 -0.024176 0.81834 -0.0078863 -1.0608 -0.015879 0.05371 -0.0091286 0.6898 -0.016567 -0.0015243 -0.0042929 -0.0091286 -0.0012572 0.69465 -0.72128 0.24081 0.062937 -0.72553 -0.015466 0.55673 -0.74054 -0.09578 0.097252 0.47667 0.80519 -0.0059522 -0.014503 -0.23277 0.80733 -0.0080244 0.60539 -0.39063 0.0097276 -0.47281 -0.6836 -0.0080244 0.00097064 -0.0070576 1.7315 0.75605 0.2369 3.6569 0.47055 -0.20498 1.1855 0.45343 0.77166 -0.010784 -0.45918 -0.0076637 -0.75813 -0.43615 -0.77005 2.0382 1.1549 0.48871 0.25012 0.59845 -0.018078 0.44748 0.81037 0.012237 0.016146 -0.016017 -0.097627 0.0368 0.79084 -0.0023553 -0.0094046 1.0918 1.6628 0.6267 -0.038714 0.28074 -0.0016629 0.85677 -0.0040162 0.51403 0.00083195 0.0013512 0.47727 0.78813 0.41747 0.010006 0.52625 -0.49611 -0.018068 0.062994 -0.32971 0.91554 -0.0048461 0.7781 0.69494 0.49014 0.33631 0.65466 -0.25866 0.49701 -1.0326e-05 0.074265 0.13806 -0.014778 0.62934 0.18283 0.3407 1.204 -0.72742 -0.0036011 1.1212 -0.0047079 -0.1595 0.59674 0.37957 0.010146 0.20947 -0.089169 -0.0067813 -0.67196 -0.012851 -0.85845 2.0657 0.29278 -0.0026322 -0.31506 -0.015811 0.18344 -0.30268 -0.4826 -0.010989 0.72319 1.5816 -0.21874 0.73151 -0.57002 1.503 -0.0049844 -0.95066 0.91824 0.40044 1.4562 -0.0030475 0.012934 -0.21342 -0.0080244 -0.015741 0.10103 0.43733 0.69764 -0.054857 0.99136 -0.83025 -0.016292 -0.85377 -0.033814 -0.063032 -0.7853 1.0394 0.66272 -0.91784 -0.01106 -0.0089906 -0.0066432 0.3946 -0.031289 -0.83962 -0.0013124 -0.017666 -0.66679 -0.77829 0.62897 0.77579 -0.028218 -0.068127 -0.6041 0 -0.55226 0.38684 0.22299 0.052983 -0.23829 -0.49036 0 0.25777 -0.026299 -0.012525 0.022164 -0.0062286 -0.0024938 -0.0082934 -0.0091286 -0.98815 0.046275 -0.54037 -0.5713 0.14503 3.5524 0.14667 -0.7627 -0.041159 -0.013087 0.13421 0.82255 -0.80389 0 -0.78278 0.11081 -0.0040162 -0.062361 -0.011198 -0.0067813 -0.0047079 -0.19119 1.9392 0.21852 -0.0059522 0.26035 -0.541 -0.017773 -0.0087146 0.011121 2.7893 -0.013402 -0.0026322 -0.70196 0.0070826 0.49493 0.93447 0.77579 -0.0015243 -0.096968 2.4018 0.027497 0.00458 0.25386 Amplification Peak 5 - CN values 8p11.21 chr8:41579827-42365372(probes 768336:768858) chr8:42000984-42016114(probes 768578:768585) chr8:36067374-48753302(probes 765388:769576) 1.605e-09 2.4853e-05 Actual Copy Change Given 0.32882 -0.8646 1.278 -0.54905 0.27553 -0.29674 1.0205 0.14064 1.9204 0.00013863 0.20427 1.6746 -0.013285 0.21975 -0.71826 -0.39493 0.19923 0.22407 0.22283 -0.69124 0.010703 -0.048408 -0.022881 0.21825 0 -0.4097 -0.041467 0.21693 0.003191 0.80422 0.01363 -0.068402 -0.0067813 -0.062495 0 -0.0037395 0.40761 0.49147 0.74778 0.00029531 -0.028491 -0.0037382 0.17166 0.54612 0.32553 -0.15108 0.032845 -0.01206 0 -0.18572 -0.0099565 -0.0040162 0.12918 -0.0019399 0.0010333 1.0523 -0.01106 0.81981 -0.57934 -0.013953 -0.0016629 2.0818 1.4834 0.68999 0.8296 -0.0081624 0.00071221 0.13888 0.68124 -0.0016629 -0.38392 -0.002506 0.013719 -0.68606 0.41988 0.0016642 0.72225 0.00089284 0.61118 0.00041593 -0.60313 -0.001304 -0.39886 0.8137 0.67963 1.2791 1.6638 -0.0063668 2.0994 0.29477 -0.0039965 0.46327 2.3272 -0.006488 -0.0024085 -0.0092666 0.87468 1.0304 0.096884 0.65093 -0.0037395 1.2061 0.014433 0.77349 0.70101 -0.50058 0.7627 -0.0041546 0.8656 0.0036076 0.48664 0.60243 -0.0049398 0.51072 0.10264 0.18646 2.2015 0.95115 -0.03245 0.41346 0.74575 0.083776 -0.0042369 0.38245 0.53485 0.23878 0.31842 -0.010094 0.28101 -0.016292 -0.004179 -0.00055444 0.00055459 0.0030522 0.018243 0.42612 -0.47131 -0.013877 0.00597 0.38891 0.089416 0.042449 -0.57851 0.57816 0.024127 -0.0011261 -0.075006 1.527 -0.72773 0.0021919 -0.46089 1.4269 0.537 -0.02941 0.61154 0.22403 0.0010089 0.5603 0.47907 0.55011 -0.0099007 -0.0031859 -0.0019399 0.011464 -0.027124 -0.58451 0.090518 0.00070366 0.53458 0.05694 -0.010756 1.1097 -0.59935 -0.012226 0.92369 -0.048748 -0.018075 -0.012156 -0.33017 -0.00027724 -0.045228 -0.009764 3.6569 -0.0055414 0.029466 0.015447 0.86295 -0.027473 0.026182 0.0040601 0.08673 0.64268 1.0241 -0.031275 0.15472 -0.0023553 -0.024661 -0.020908 -0.3551 0.016845 0.83215 -0.015054 -0.58096 -0.0011087 -0.0048461 -0.01409 1.318 0.071898 -0.006505 -0.0031859 0.94037 0.020843 0.0027745 0.72305 -0.82301 0.020063 0.011792 -0.024176 0.83263 -0.0078863 1.4305 -0.015879 0.05371 -0.0091286 0.6898 -0.016567 0.69615 -0.0042929 -0.0091286 -0.0012572 0.69465 2.3082 0.24081 0.062937 -0.72553 -0.015466 0.55673 0.022725 1.2045 0.097252 0.47667 0.0467 -0.0059522 -0.014503 -0.23277 0.80733 -0.0080244 0.60539 -0.39063 0.0097276 -0.47281 0.01419 -0.0080244 0.00097064 -0.0070576 0.047781 0.75605 0.2369 0.87787 0.47055 -0.20498 1.1718 0.45343 0.77166 -0.010784 -0.45918 -0.0076637 -0.75813 0.42755 3.6569 1.4783 1.0277 0.48871 0.25012 0.59845 -0.018078 3.6569 0.81037 0.012237 0.016146 -0.016017 0.79142 0.0368 0.18419 -0.0023553 -0.0094046 1.0918 0.84602 0.6267 -0.038714 0.28074 -0.0016629 0.85677 -0.0040162 0.51403 0.00083195 0.0013512 0.47727 0.78813 0.41747 0.010006 0.52625 0.45632 -0.046844 0.062994 0.052668 0.91554 0.87528 0.74802 0.69494 0.49014 0.33631 0.65466 -0.25866 0.49701 -1.0326e-05 0.074265 0.13806 -0.014778 -0.013127 0.18283 0.3407 1.204 0 -0.0036011 0.99717 -0.0047079 -0.1595 2.3433 0.37957 0.010146 0.20947 -0.089169 -0.0067813 -0.67196 -0.012851 -0.023703 2.0657 0.29278 -0.0026322 -0.31506 -0.015811 0.15402 0.1194 -0.51866 -0.010989 0.72319 1.5485 -0.023292 0.73151 0.66315 1.503 -0.0049844 0.86826 1.42 0.40044 0.75091 -0.0030475 0.012934 0.26812 -0.0080244 -0.015741 0.10103 0.43733 0.69764 -0.054857 0.99136 2.1826 -0.016292 -0.85377 0.017684 -0.063032 -0.7853 0.97443 0.66272 -0.91784 -0.01106 -0.0089906 -0.0066432 0.87265 -0.031289 -0.83962 -0.0013124 -0.017666 -0.66679 0.069095 -0.028218 0.77579 -0.028218 0.58059 -0.6041 0 0.53309 0.38684 0.22299 0.052983 -0.23829 0.71888 0 0.25777 -0.069466 -0.012525 0.022164 -0.0062286 -0.0024938 -0.0082934 -0.0091286 1.2445 0.046275 -0.54037 0.95038 0.14503 -0.29662 0.14667 1.8635 -0.041159 -0.013087 0.13421 0.7808 -0.79986 0 -0.79461 0.11081 -0.0040162 -0.062361 -0.011198 -0.0067813 -0.0047079 -0.19119 0.24669 0.21852 -0.010784 0.26035 0.48162 -0.017773 -0.0087146 0.011121 -0.68195 -0.013402 -0.0026322 -0.015827 0.0070826 0.49493 0.93447 0.77579 -0.0015243 -0.096968 2.4018 0.027497 0.00458 0.25386 Amplification Peak 6 - CN values 8q24.21 chr8:128389850-128754688(probes 815428:815725) chr8:128578774-128590175(probes 815575:815580) chr8:73011231-146364022(probes 783663:825605) 1.8273e-18 1.8273e-18 Actual Copy Change Given 0.32882 0.00083195 1.6192 0.85284 0.28946 0.75891 1.1962 0.16287 1.1333 0.0019418 0.35512 0.67065 -0.0047079 1.2937 0.021323 -0.37853 0.19923 0.18298 0.22283 0.35316 0.010703 0.33067 0.66272 0.87443 0 0.15726 -0.040516 0.21693 1.6734 0.64433 0.026373 1.5744 -0.0041546 0.81903 0 -0.0037395 0.3933 1.3769 0.74778 -0.0098185 0.60647 -0.00041585 1.1722 0.54612 0.4426 0.41898 0.032845 0.68547 -0.0059522 0.13095 -0.0099565 -0.0040162 0.12918 -0.0019399 0.0010333 0.073402 0.50707 0.8572 1.3338 -0.013953 -0.0023775 1.9809 1.4834 1.4407 0.84021 -0.0081624 0.0114 0.38213 0.6831 -0.021784 -0.38392 0.0059166 0.0075199 0.35773 0.39341 0.0016642 0.72225 -0.00076971 0.61118 0.013492 1.5652 -0.001304 -0.39886 0.84764 0.69578 1.3021 2.8738 1.0606 2.039 0.29477 0.013496 0.42765 2.3272 0.0048579 -0.0024085 0.77753 0.87468 -0.046718 0.096525 0.62715 -0.0037395 1.7079 1.8007 0.77897 1.7402 -0.027671 0.77345 -0.0041546 0.88593 -0.0085766 0.48561 0.65638 0.0037465 0.48217 0.10264 0.18304 -0.054772 0.95115 -0.023155 0.41346 0.74575 0.16265 0.0040806 0.41455 0.52881 0.30841 0.37907 -0.010094 0.2885 -0.0037395 -0.004179 0.011425 0.0030371 0.0030522 0.016146 0.44265 0.83137 -0.038009 0.0048579 0.41759 0.074444 -0.0013858 1.4459 0.57816 0.76069 0.018803 1.0582 1.06 0.027076 0.0025388 0.20183 1.8166 0.51459 1.2298 1.8522 0.77003 0.0010089 0.24771 0.47907 0.57905 -0.0019399 -0.0031859 -0.0019399 0.011464 0.54206 1.3806 0.70822 0.00070366 0.5617 0.067088 0.015971 1.1444 1.1234 -1.8682e-05 2.5821 1.5271 0.67401 -0.0084385 -0.36374 -0.00027724 1.1824 -0.008129 2.0269 -0.032178 -0.028549 0.0091705 0.86295 -0.023367 0.026182 0.037924 0.08673 0.66032 1.0674 -0.031275 0.15367 -0.0023553 0.59584 -0.020908 0.94119 0.038065 0.83215 -0.015054 0.31782 -0.0011087 -0.0048461 -0.012713 1.8347 0.093185 -0.006505 -0.0031859 0.86751 0.016783 0.0027745 0.72305 0.91683 -0.017254 0.61749 3.6569 0.82969 -0.0078863 1.5362 -0.015879 0.05371 -0.0091286 0.7488 1.1329 0.38231 -0.011012 -0.0091286 0.001803 0.69465 0.17966 0.27891 0.060489 0.84573 -0.015466 0.55468 0.0033299 0.54541 0.097252 0.48165 1.2018 -0.0059522 -0.016017 0.69982 0.81809 -0.0080244 0.60539 -0.39651 0.0097276 1.172 0.73154 0.0080567 0.00097064 -0.0070576 0.87122 0.7502 0.26169 0.87787 0.47246 3.2093 0.7982 1.0453 3.6569 -0.0019399 0.30058 -0.0012473 1.9392 0.43365 1.2074 0.17573 1.0525 0.49113 0.25012 0.61552 -0.018078 0.42083 0.79793 0.012237 0.016146 0.45139 0.81045 0.053806 0.70607 -0.0023553 -0.0094046 2.5246 0.13235 0.63646 0.39479 0.27568 -0.0016629 0.87558 -0.0040162 0.5252 0.00083195 -0.0026677 0.49546 0.81103 0.45751 0.010006 0.53819 0.9674 1.2829 1.6791 0.052668 0.91602 0.6345 0.75891 0.69494 2.0219 0.63523 1.2237 0.3669 0.49701 -1.0326e-05 0.12079 0.13806 -0.02384 0.68962 0.18283 0.35545 1.204 0 -0.0036011 0.013213 -0.0047079 0.050108 2.4257 0.025671 0.029325 0.20947 -0.08413 -0.0067813 0.63445 2.7476 0.78929 3.5412 0.29278 -0.0026322 -0.16586 -0.0015944 0.17815 0.1194 0.42016 -0.0012473 0.72358 1.5694 0.17407 0.72799 0.66475 1.7355 -0.0049844 0.86826 1.4625 0.40044 0.94119 -0.0062286 0.012934 0.26812 -0.0026322 -0.012024 0.97172 0.51072 0.69764 1.6178 2.264 0.76523 -0.0018815 3.6569 0.014546 -0.0078863 0.21945 1.0245 0.66488 -0.021358 -0.0048461 -0.0089906 -0.012611 0.87265 -0.035106 0.02511 -0.0013124 -0.017666 1.11 0.87069 1.1762 0.77579 -0.028218 0.67586 0.6297 0 0.52594 0.38684 0.22299 0.052983 -0.23829 0.7429 0 0.35888 -0.024388 0.0097276 0.022164 -0.0062286 -0.0024938 -0.0082934 -0.0091286 1.256 0.046275 0.47821 2.4417 0.14503 1.1694 0.14667 1.9063 2.1577 -0.0070576 0.15218 1.0249 0.6818 0 1.3506 0.11081 -0.0040162 -0.0056757 -0.011198 -0.0067813 -0.0058809 -0.16154 0.66697 0.21852 -0.010784 0.26393 0.48144 0.0010016 -0.0087146 0.0084743 1.4089 -0.0088526 -0.0026322 0.6179 0.071098 0.49493 0.91905 0.82804 -0.0015243 -0.080141 1.4063 0.03031 0.0068044 0.25386 Amplification Peak 7 - CN values 11p15.5 chr11:2141587-2244703(probes 974244:974271) chr11:2152221-2238395(probes 974245:974267) chr11:2105216-2294904(probes 974232:974287) 1.605e-09 1.605e-09 Actual Copy Change Given -0.0092666 -0.0015243 -0.019467 0.078727 0.85859 -0.0077482 0.42385 -0.037696 1.1914 0.0097276 -0.013815 0.30777 0.0097234 0 -0.0056757 0.27568 -0.047915 0.0015255 0.0030522 0.082188 0.00069327 -0.0040162 -0.039801 0.048366 0.0036076 -0.36714 -0.0034995 -0.15388 -0.010094 0.00055459 -0.12356 0.13124 -0.0020784 0 -0.0084555 -0.01106 -0.0098185 -0.044686 0.00055459 -0.23141 0.0066653 -0.0016629 0.1664 0.25027 -0.19347 -0.043873 -0.19337 -0.01976 -0.0008316 0.42016 -0.0034627 0.00458 -0.024661 -0.0019399 0.00047862 0.008892 -0.58089 0.7353 0.54341 0 0.0077783 0.49874 0.047836 -0.014366 -0.0091286 0.66549 0.001249 -0.29561 -0.010232 0.0051359 0.018663 -0.00038448 0.53995 0.69092 -0.011293 0 -0.005814 0.0027745 0.0052698 0.0040243 0.5633 0.47444 0.67715 -0.012621 0.74119 0 0.44012 0.020203 -0.023429 0 0.0034721 0.16636 0.39634 0.0049969 0.0027434 0.66919 -0.021875 0.050819 0.64433 0.37051 0 0.013772 -0.54333 -0.00027724 0.0069435 -0.47636 0.028735 0.0030522 0.13101 -0.0062286 0.49096 0.00091372 0.0081959 0.057939 -0.0015243 -0.12555 -0.070001 -0.25449 -0.021235 0.81337 0.90392 0.037359 0 -0.49277 -0.0085766 -0.027124 0.086522 0.00069327 -0.0044312 -0.016292 1.2454 -0.0050152 1.4757 0.0011642 0.0020805 0.0015719 0.10731 0.0032168 -0.0053992 0.41862 0.07484 -0.017803 0.24373 0.0035274 -0.012438 -0.29461 0.20633 0.013688 -0.70861 0.0065262 0.023566 0.19376 0.034144 0.016883 -0.21713 0.81084 0.0052967 0.0050157 -0.26276 -0.57762 -0.0014018 0.0013868 -0.0042929 -0.69944 0.54594 -0.013214 -0.26805 -0.5294 -0.021098 -0.40448 -0.030711 -0.016741 0 0.017665 -0.0016629 0.2484 -0.012435 0.55089 0.037359 0.004719 -0.011887 -0.012621 0 -0.012989 0.45855 -0.015569 -0.013815 -0.0011845 -0.0083502 -0.011887 -0.2818 -0.0081624 1.111 0.0083351 1.3471 -0.0051227 -0.012989 -0.002025 0.31257 -0.07401 -0.019177 -0.014916 -0.40749 -0.0027707 0.0051359 -0.66374 1.0373 -0.31365 0.7593 0.67493 0.037217 -0.016351 -0.0027707 -0.045906 -0.366 1.0289 -0.061177 0.88197 -0.021998 0.00027728 0.048623 -0.0048461 -0.0046625 -0.37775 -0.0085766 -0.0019399 0.75586 0.0011093 0 -0.00027724 -0.1449 1.0138 -0.0022937 0.0011093 -0.075612 -0.00069303 -0.1609 0.41212 -0.0049844 -0.38168 -0.00097017 0.38568 0.17737 0.015716 -0.2066 0 0.013632 -0.084395 -0.37966 -0.020961 0.3541 0.00083195 -0.0024938 0.0044411 -0.10289 0.052186 -0.010969 -0.068931 0.012655 -0.0031859 0.12992 0.29107 -0.0066432 -0.019705 -0.0011087 -0.047801 0.0027745 0.1744 -0.0011087 -0.0038779 0.11301 0.57041 -0.026577 -0.0055375 0.49805 -0.00027724 0.003191 0.81661 0.38254 0.012516 0.00027728 0.13362 0.00055459 0.14117 -0.0040162 0.015308 -0.012892 -0.36913 0.0079175 -0.019177 1.2864 -0.0041546 -0.015741 -0.0022168 0.0467 0.0038854 0 0.010429 -0.010784 -0.0053992 -0.0016629 0.79723 0.001803 -0.015111 0.083051 0.051814 -0.049424 0.45045 -0.0018014 -0.0037395 -0.19275 -0.13387 -0.2201 0.11594 -0.015741 -0.0073442 -0.39274 0.12682 -0.0099565 1.7208 -0.016841 -0.0063668 0.073681 0.074058 -0.0099565 0.0080567 0.0019418 -1.0286 0 0.21054 -0.21935 0.032281 -0.080541 -0.46259 0.62006 -0.02151 0.80578 -0.011611 -0.29745 -0.0029091 -0.0046523 -0.038239 0.98763 -0.28851 0 0.68552 -0.015191 -0.039258 0 0.004719 0.00027728 0.2414 -0.0049844 -0.043455 0.0029133 -0.14759 -0.081472 0.0038854 -0.015466 0.15537 0 0.0027745 0.0913 -0.0060904 -0.02151 0.010842 0.0036076 0.033549 0.0044411 0.28691 -0.087314 -0.026167 0.012237 -0.087049 -0.0080244 0.024843 0 0.0086135 -0.012438 0.088669 7.1372e-05 -0.048883 0.0022193 0.0026357 0.46536 0.90795 -0.011473 -0.0099565 -0.020824 -0.062226 0.64249 0.0056919 0.43682 0.020774 -0.030404 -0.07665 0.02003 -0.0033243 -0.0080244 -0.053186 0.0051359 0.021323 -0.0059522 -0.023566 -0.0015243 -0.00304 0.0040267 0.54665 -0.042003 -0.012713 0.44155 -0.0031859 0.24451 -0.0024938 -0.038306 0.41212 0.00055459 0.19573 -0.0063668 3.6569 -0.24436 -0.3203 -0.010094 0.00069327 0.0019418 -0.0098185 -0.0042929 0.0038854 0.04344 0 -0.012576 -0.0013858 -0.32828 0.019055 0.023878 0.0026781 0.0023408 -0.0013858 -0.37504 -0.031905 -0.000641 1.0439 0.46195 0.0022193 -0.0099565 -0.0053992 0.094927 0.21401 0.91057 -0.0088526 -0.0016629 Amplification Peak 8 - CN values 12p13.33 chr12:2055585-4699385(probes 1050873:1052641) chr12:3163548-3303398(probes 1051518:1051637) chr12:1-6227918(probes 1050576:1053969) 2.8622e-08 2.8622e-08 Actual Copy Change Given 0.31223 -0.02151 0.55264 -0.035585 0 0.0044411 0.032986 -0.072432 -0.1779 0.0055529 0.015308 -0.018078 0.018523 -0.094592 -0.0034627 0.26577 -0.039529 -0.45426 0.1492 0.018555 0.0024969 -0.0027707 0.34264 2.7922 0.54224 -0.30616 0.4307 0.077718 -0.0029091 -0.0023553 -0.13949 -0.050107 0.0040243 0.05523 0.42603 0.0015255 -0.0078863 -0.014916 -0.026714 0.025952 -0.027945 0.0062481 0.13791 -0.023495 0.013656 0.48045 0.076422 -0.0015585 0.00083195 0.025222 0.63827 0.0055529 0.21192 0.0022193 0.41236 -0.16154 -0.0048461 -0.34021 -0.0054566 -0.016841 0.0051359 0.39878 0 0.0062481 0.062508 0.7042 -0.0011087 -0.070726 0.0012481 0.008892 0.010424 0.003971 0.017824 0.0058309 0.95154 0.015447 0.73568 0.0012481 0.0052749 -0.0038779 0.53854 0.00458 0.0012481 0.5018 0.68928 -0.23361 0.53578 0.0076392 -0.0012473 -0.32861 0.011682 -0.14698 -0.0093635 0.0026357 -0.0018034 -0.034045 0.039619 0.10979 0.00597 -0.024114 -0.018628 2.346 -0.005349 0.0027745 0.0076392 -0.46653 -0.011638 0.57434 -0.14819 -0.0045695 0.0095883 -0.019963 0.67771 0.49424 0 0.69447 -0.81894 0.017333 0.030591 0.020483 0.7593 -0.019608 0.49517 0.46024 0.0052749 0.81064 -0.094592 0.38089 0.47135 0.70964 -0.0069438 -0.08019 0.0052749 -0.0037395 0.011539 6.2835e-05 0.12889 0.84045 0.59768 -0.014659 0.049662 -0.0044312 0.49338 0.54702 -0.070135 0.022304 -0.076477 -0.10337 0.031859 0.0019418 -0.3031 -0.16764 -0.065418 0.0096265 0.049114 -0.0011087 -0.0010705 0.029344 0.81884 0.25482 0.0064358 0.2087 0.42519 3.6569 0.00069327 -0.0083005 0.08392 0.042884 0 -0.36022 0 0 0.0066653 0.011242 -0.074678 -0.018216 0.67441 -0.0027707 0.015727 0.0070826 0.0058309 0.011679 0.022865 0.0097276 0.99426 0.017963 0.87707 0.00089481 0.051905 0.00041593 0.094927 -0.0040162 0.013772 0.013213 -0.070402 0.0081959 0 -0.033733 -0.0023553 -0.66328 0.8033 0.60196 0.017963 0.0013868 0.017264 0.013632 0.0043021 0.13081 0.00027728 0.0079175 0.030591 0.71294 -0.002178 0.86712 -0.35339 0.031155 0.0027486 0.0067409 0.81154 0.82764 0.089852 0.79665 0.062698 0.14295 0.50724 0.0037465 -0.0024938 0.001803 0.0069613 0.0072217 -0.10447 -0.15298 0.4983 -0.0013025 1.9545 0.0076392 -0.14361 -0.0026322 0.54647 0.097979 0.0048579 -0.11521 -0.0051227 0 -0.22096 0.015587 0.0041632 -0.075345 0.029888 -0.032771 0.39409 0.00055459 -0.0031859 -0.0015243 0.13806 0.034482 0.065656 0.23194 -0.0083005 -0.0056757 0.025671 -0.014424 0.027778 0.8177 0.16505 0.03956 0.0036076 0.029487 0.012795 3.6569 0.63719 0.5788 -0.036946 0.25261 -0.3463 -0.0043517 0.00023173 -0.00073116 -0.027261 0 0.00458 -0.036129 -0.00013862 0.30489 0.45981 0.0056919 0.7425 -0.35585 0.6403 -0.013114 0.29024 0.0023581 0.017684 0.0034687 0.64414 0.0015255 -0.0039863 0.78578 -0.010508 0.4863 -0.0056757 -0.1701 0.00013863 -0.053736 -0.00049957 0.032422 -0.029584 1.4832 0.34502 -0.0016629 -0.19288 0.10556 0.52048 -0.024935 -0.0024938 0.0019314 -0.2217 -0.10985 -0.01409 0.60611 0.0094491 0.0020805 0.12431 -0.25133 0.74537 0.72414 0.0072217 -0.0239 0.054233 0.016565 0.36559 -0.46398 -0.079343 -0.0060904 0.0097276 -0.025756 0.013911 0.012934 0.86473 0.0073609 0.52136 0.0027043 -0.23006 -0.0041778 -0.41487 0.0022859 0.73663 0.010424 0.91158 0.0058309 2.3494 -0.39018 0.0073609 0.00024333 -0.0071958 0.11448 -0.026304 0.00597 0.25683 0.12358 0.0044411 0.43142 -0.25455 0.56845 0.67678 0.657 0.0033299 0.068952 0.0040243 0.046417 1.9909 -0.31143 0.016985 -0.067993 0.65461 0.034551 0.0026357 -0.00027724 0.00597 -0.044916 -0.04299 0.0026357 -0.0027707 0.0080567 -0.0059522 0.07096 0.017684 0.00055459 0.40911 1.0203 -0.20124 -0.0055375 -0.0030475 0.0020805 0.0043021 0.12789 0.014157 1.0367 0.0066653 -0.24472 0.015028 0.034959 0.0020805 -0.0008316 0.0020805 -0.0044312 -0.017051 0.00458 0.0098669 0.010424 -0.026791 0.0037465 -0.11273 0.0068044 0.65222 0.065761 0.010006 -0.047531 0.0012698 0.34808 -0.23618 -0.33779 0.0048579 0.0068044 0.0075 0.30985 0.010146 0.0062481 -0.030618 0.010285 0.12219 0.0020805 -0.023252 1.1603 0.053411 0.0055529 -0.0031859 0.30761 -0.0061299 -0.62331 0.0079698 0.028734 -0.061823 -0.032041 0.077286 0.0015255 0.39479 -0.17289 -0.38448 0.034395 0.0040243 Amplification Peak 9 - CN values 13q12.13 chr13:27521847-27533641(probes 1128366:1128372) chr13:27523027-27533230(probes 1128367:1128371) chr13:1-115169878(probes 1124039:1180319) 6.534e-28 9.2832e-21 Actual Copy Change Given 0.34261 0.82373 1.0859 0.067948 1.3581 0.25013 0.041741 1.2879 0.89487 0.89989 0.80539 0.37166 -0.010922 0.025812 0.7798 0.7528 1.646 0.86136 0.25548 0.79103 0.018346 -0.0037395 -0.021253 1.7468 0.84929 2.48 0.1398 0.67715 1.0791 0.040609 0.63627 1.3129 0.41346 2.5065 -0.046583 -0.00653 0.76236 0.49096 0.39031 1.0504 0.70983 0.00055459 3.6569 0.53222 0.29043 2.2531 0.26357 1.3666 0.0049969 0.47924 -0.0088526 -0.00013862 1.4629 0 -0.0090979 1.1134 0.93162 2.8851 1.4993 0.2858 -0.0084571 0.060936 0.44729 0.68366 0.00041593 0.6508 -0.011046 1.041 -0.0068264 -0.0008316 1.5308 -0.0071157 1.034 0.67548 2.8273 0.023847 0.7072 0.0020805 -0.0019399 0.6954 -0.038908 0.0051359 0.36953 0.90749 0.67678 0.72078 1.7658 0.99011 1.5605 3.1879 2.3349 0.27312 0.47947 -0.0022168 0 -0.23429 1.0344 0.27995 1.9704 1.0319 0.073402 0.64066 1.6002 -0.0047079 -0.010922 1.8364 1.3942 -0.0053992 0.32533 0 -0.0098185 1.8687 -0.00069303 1.3697 0.17875 0.72527 0.85363 0.026935 1.4243 0.26066 3.6569 1.0464 -0.010452 3.6569 -0.020619 0.14176 0.51388 0.77252 1.3954 0.72476 0.76692 -0.016154 -0.0045695 0 0.0058309 1.2394 0.69381 0.82807 -0.012163 1.3322 0.20259 0.051103 -0.027189 -0.031711 -0.024798 0.81659 0.38246 0.62915 2.8316 -0.0048461 0.31161 1.4882 0.59426 0.60887 0.93264 -0.12213 -0.0099184 0.86079 0.85047 1.0147 0.020203 0.24031 -0.017391 -0.020623 0.97546 0.56199 0.099724 2.0629 0.53169 2.667 1.8373 3.3224 1.0057 -0.016308 1.4498 0.25449 -0.031356 0.59314 0.40911 0.6818 0.29427 -0.018004 1.4245 -0.004124 2.0948 0.052099 -0.017575 2.0473 -0.0015743 0.057653 0.62843 -0.022469 -0.0032883 1.1 -0.021566 0 1.2771 0.92075 1.1639 1.5876 1.1593 0.60359 0.018243 -0.0037395 0.0026357 0.011679 -0.012989 0.47272 -0.0065898 0 -0.012851 0.051184 -0.0034627 0.0058309 1.4136 0.96329 3.6569 -0.024861 0.010067 0.062794 0.64048 0.78446 0.046889 0.59116 -0.01889 0.1317 -0.026441 -0.0033243 0.19778 -0.0053992 0.59027 1.0898 0.77376 -0.0030475 0.7982 -0.0087146 0.60826 0.019561 -0.011452 0.38551 -0.027261 0.54206 1.0243 0.59332 -0.14862 0.7982 -0.012024 3.6569 0.01419 0.013353 1.4723 1.4405 0.48135 -0.0081624 0.27631 0 -0.011887 0.19147 2.6002 1.4822 0.55673 0.61498 0.031334 0.57401 0.0023581 0.66715 -0.0089906 1.1232 0.90875 2.5634 -0.41014 1.1742 0.23535 0.17332 0.09188 -0.0078863 -0.41564 0.80414 0.027076 -0.0008316 -0.01106 0.44274 1.27 1.3033 0.00076727 -0.0029091 -0.016704 1.1101 -0.0067813 1.4491 -0.24363 -0.0038636 -0.012089 0.026092 1.71 -0.011335 0.0072113 0.49386 0.077142 0.63737 0.015866 0.51839 -0.023703 1.3203 0.37535 0.61189 1.3638 0.30702 1.1327 -0.0049844 2.4909 -0.0157 1.2793 0.71453 0.49735 -0.010267 0.92817 0.41647 0.92411 -0.019314 0.28343 0.55726 0.54876 0.79385 0.00069327 0.73173 -0.0018014 0.011261 0.30074 0.62879 1.1562 0.8015 0.0083351 -0.0049844 0.71536 1.2598 0.82099 0.69914 0.027076 -0.0084692 0.61118 1.4635 1.1879 1.1151 0.53977 0.6766 0.72697 1.5635 0.33772 -0.010508 0.0446 0.42116 0.0024969 0.65806 0.37282 0.31466 2.8376 -0.0044312 0.02806 0.13435 -0.010232 0.42688 1.968 0.54773 0.674 -0.019177 -0.0098185 1.7383 0.741 0.13672 0.37973 0.071248 -0.0070576 1.4123 0.024268 0.79164 0.00013863 0.36117 -0.0060904 1.1168 0.58175 0.61665 0.0043021 3.3736 0.54718 0.061937 -0.015191 0.078727 -0.033525 3.0093 1.4288 0.00027728 0.008892 -0.0042929 0.7951 0.025561 -0.15422 -0.00013862 0.3056 0.51507 0.39944 0.51751 0.55779 0.44054 0.0022193 1.0827 2.4583 0.45241 1.7693 0.48045 0.47704 -0.0030475 1.4617 -0.0020784 1.4111 -0.035312 -0.0078592 1.4699 1.1171 1.0642 0.057368 0.19451 0.83294 0.0041632 0.02511 0.0011093 0.58908 -0.00055444 0.39181 0.45428 0.24981 -0.016704 1.4116 0.025893 0.6769 0 0.041458 1.9438 -0.01409 0.8703 0.66722 0.7911 3.6569 0.90875 3.317 -0.0049844 1.8158 1.4798 0.81806 0.7862 -0.0041546 Amplification Peak 10 - CN values 13q22.1 chr13:73599695-74055302(probes 1154457:1154808) chr13:73691529-73700739(probes 1154512:1154512) chr13:1-115169878(probes 1124039:1180319) 6.0835e-13 5.3253e-08 Actual Copy Change Given 0.34453 0.82373 1.0859 0.072396 0.042174 0.25228 0.041741 1.2879 0.98638 0.89989 0.70214 0.41111 -0.010922 0.0095339 0.72768 0.7528 1.5536 0.86136 0.25548 0.79103 0.018346 0.017404 -0.1979 1.7284 -0.01037 2.4928 0.15991 0.67816 0.98579 0.040609 0.60563 1.3129 0.41346 2.484 -0.046583 0.0025804 0.79045 0.46089 1.2072 1.0015 0.70046 0.00055459 1.3818 0.18313 1.6592 1.9933 0.31274 1.3357 0.0049969 0.47392 -0.0088526 -0.00013862 1.4629 0 -0.0090979 1.1234 0.5433 2.6245 0.52496 0.27916 0.0024969 0.050819 0.44729 0.6898 0.00041593 0.68645 0.001803 1.041 0.012655 -0.0008316 1.5662 0.0083943 0.42603 0.67548 2.8483 0.023847 1.4143 0.0020805 -0.0019399 0.6954 -0.020961 0.0051359 1.0814 0.92324 0.67678 0.75356 1.6761 0.99011 1.5605 0.0047856 2.3833 0.22175 0.47947 -0.0022168 0 -0.23429 1.0344 0.25326 1.9704 1.0319 0.073402 0.64066 1.6333 -0.0047079 0.50824 1.7096 1.3616 -0.0053992 0.32533 0 0.0091705 1.8551 0.0048579 1.2839 0.17875 0.69521 0.86096 0.021963 1.6981 0.26066 -0.0040162 0.79162 -0.010452 0.42121 -0.0037395 0.14935 0.62843 0.77252 1.3954 0.72476 -0.0015488 -0.016154 -0.0045695 0 0.016985 1.2947 0.72225 0.82807 -0.012163 1.3322 0.20259 0.0080325 -0.01106 -0.0074137 -0.0095426 0.81659 0.38246 0.65966 0.056655 -0.0048461 0.31161 1.3971 0.59426 0.63158 0.96555 0.14593 -0.0099184 0.74943 0.85047 0.99885 0.020203 0.24031 -0.017391 1.3977 0.99717 0.56199 0.097833 1.0293 0.53169 2.6936 1.8373 2.2295 1.0057 0.0037278 0 0.25449 -0.031356 0.59314 0.78794 0.6818 0.3206 0.03031 1.4245 -0.0011087 1.5583 0.052099 0.013632 1.932 -0.016066 0.057653 0.61879 -0.0023553 1.2187 1.0477 0.01433 0 1.2294 0.92075 1.114 1.5876 1.1593 0.59045 0.018243 -0.0037395 -0.0033087 0.011679 3.6569 0.47272 -0.0065898 0 -0.010646 0.081116 -0.0034627 0.0058309 1.4136 0.99654 1.1818 -0.024861 0.010067 0.062794 0.64048 0.78446 0.046889 0.56525 0.53907 0.12975 1.4267 -0.0033243 0.19778 0.57541 0.59027 1.0898 0.77376 -0.0030475 0.78687 -0.00060628 0.60826 -0.0037395 -0.010646 0.29899 -0.027261 0.89588 1.0243 0.59332 -0.52113 0.7982 -0.011198 0.38466 0.01419 0.013353 1.4512 1.4376 0.48135 -0.012024 0.27237 0 -0.011887 0.18696 -0.85932 1.4822 0.55673 0.58409 0.039012 0.57401 0.0023581 0.67396 -0.0089906 1.1232 0.52713 2.5634 -0.41014 1.0913 1.1802 0.17332 0.09188 -0.0078863 -0.41564 1.5728 0.027076 -0.0008316 -0.01106 0.44274 1.2619 0.40361 0.00076727 -0.0029091 0.016985 1.1034 -0.015191 1.4629 -0.20871 -0.0038636 -0.012089 0.026092 1.6238 -0.011335 0.0072113 0.49386 0.077142 0.50477 0.015866 0.51839 -0.023703 1.3203 0.34316 0.61189 0.37199 0.30702 1.1327 -0.0049844 3.4193 -0.0157 1.2793 0.71453 0.49735 -0.0030578 0.92545 0.44409 0.92411 -0.019314 0.28048 0.55726 0.53712 0.77667 0.00069327 0.73173 -0.0018014 0.027919 0.30761 0.62879 1.1562 0.77118 0.0083351 -0.0049844 0.71536 1.2522 0.82118 0.69914 0.027076 -0.00069303 0.6063 1.4635 0.56454 1.066 0.53977 0.6766 0.72697 1.5247 0.33772 -0.010508 0.070817 0.42116 0.0024969 0.62798 0.37282 0.32414 0.4669 -0.0044312 0.02806 0.487 -0.0023553 0.42688 1.9022 0.53116 1.4945 2.6409 0.60413 1.7383 0.71208 0.12472 0.37168 0.065513 -0.00069303 1.4123 0.024268 1.4577 -0.0025956 0.36117 -0.0060904 1.1168 0.58175 0.6308 0.0043021 2.0192 1.1987 0.061937 -0.012024 0.078727 -0.033525 -0.0076101 1.4288 0.010424 0.008892 -0.0042929 0.78601 0.025561 -0.15422 -0.00013862 0.3056 0.51507 0.39944 0.49515 0.55779 0.44054 0.0022193 1.0827 2.3954 0.45241 1.7693 0.48045 0.94384 -0.0030475 0.68533 -0.0020784 1.4111 -0.035312 -0.0078592 1.4699 0.34681 1.0642 0.057368 0.19451 0.83294 0.0041632 -0.87304 0.0011093 0.58908 -0.00055444 0.39181 0.24047 0.24981 -0.016704 1.4234 0.025893 0.6769 0 1.4803 1.8606 -0.01409 0.8703 0.66722 0.7911 0.3473 0.90875 3.6569 -0.0049844 1.6004 0.7012 0.83373 0.037782 -0.0041546 Amplification Peak 11 - CN values 16p11.2 chr16:30611431-31003843(probes 1286991:1287123) chr16:30685250-30695457(probes 1287009:1287011) chr16:30488928-31011182(probes 1286962:1287125) 0.028297 0.068154 Actual Copy Change Given -0.0044312 0.057796 -0.0085917 -0.071834 0.074848 -0.0059522 0.57755 0.28319 0.45615 -0.0038779 0.012934 0.33193 -0.012024 0.5345 0.0015255 0.36395 0.38105 0.1933 -0.005261 0.42503 -0.0076101 0.99779 -0.02562 0.037886 -0.024661 -0.03095 -0.10424 0.34551 0.041741 0.0037063 0.61625 0.51756 -0.010094 0.072684 -0.011198 -0.014916 0.040751 0.35414 0.0052749 0.062508 0.28834 -0.0060904 0.69167 -0.028355 -0.094667 3.6569 -0.21119 0.021569 -0.014973 0.37183 0.0054139 -0.0045695 0.042732 -0.052261 0.0021433 -0.13199 -0.037082 0.024489 -0.0075293 0 -0.025072 0.004719 0.0054139 0.0066653 -0.028218 -0.03857 -0.018216 0 -0.027398 -0.01354 0.042307 -0.02154 0.015727 0.053521 0.040703 -0.0047079 -0.0092666 -0.014228 -0.010508 0.46024 -0.018628 -0.011511 0.023987 0.49764 -0.019314 0.31835 0.60313 -0.0008316 0.033972 0.13694 0.054664 0.24945 0.46695 -0.0085766 -0.0099565 -0.029448 0.060382 0.30999 0.035524 0.5135 -0.027808 0.015447 0.013215 -0.019314 -0.0031859 -0.095342 0.046247 -0.0012473 0.20275 -0.0089906 -0.0023553 0.72123 0.0016642 -0.0056908 0.23628 -0.25491 0.33723 0.063865 0.053664 0.0091705 0.0055092 0.044007 -8.1157e-05 0.41647 -0.0070576 0 0.03031 0.98018 0.5142 -0.029857 0.018638 -0.045919 -0.0087146 -0.012433 -0.38739 0.19793 0.73534 0.67292 -0.018628 0.82018 0.078438 -0.029448 0.49822 0.9521 -0.0067813 0.018383 0.32294 0.00061053 0.50602 -0.0060904 0.3771 0.25793 0.53876 0.53384 0.50985 -0.026714 -0.01116 0.6528 0.11946 0.48494 0.01082 -0.00069303 0.010703 0.96976 0.5865 0.23969 -0.28061 0.0013972 0.56561 0 0.091408 0.057421 0.54559 -0.0075486 0.031718 0.29772 -0.0030445 -0.0062286 0.013772 -0.0030475 -0.062764 -0.031847 0.060651 -0.0066387 0.53309 -0.010542 -0.032996 0.033754 -0.0083502 -0.044144 0.20305 -0.010646 0.072971 0.058224 -0.032996 -0.020824 0.029606 0.55822 -0.017391 0.043299 0.39795 0.01419 0.030451 -0.0067813 0.0066653 -0.013127 0.0013937 0.37166 -0.0049844 0.034818 0.034959 -0.025268 0.0015255 -0.027261 0.095798 0.076422 -0.011775 0.00076866 -0.082076 -0.0051227 0.39446 0.0049969 -0.0072886 0.41479 -0.016017 -0.0040162 0 -0.013264 0 -0.0096806 -0.030267 0.19984 0.15449 -0.0095426 0.12432 -0.010508 -0.13005 0.048303 0.010842 0.086956 -0.010508 -0.10753 0.33966 0.69951 0.19406 -0.0068415 -0.0016629 0.24187 -0.37966 -0.017666 0.48307 0.0073609 -0.017391 -0.014916 0.012934 -0.12841 -0.01221 0.1628 -0.020549 0.024969 -0.0060904 0.31257 -0.0073339 -0.00039423 -0.0094332 0 -0.0094046 0.4834 0.43969 0.037217 -0.25031 0.71791 0.42637 -0.013402 0.066372 0.0068044 0.20641 0.010087 0.050961 -0.005261 -0.013127 0.34713 0.00013863 0.26294 -0.014916 -0.0026322 -0.027398 0.76359 -0.019804 0.45888 -0.2514 -0.012162 -0.0094618 -0.0049844 0.070099 -0.0123 -0.016602 0.37776 -0.03095 0.019503 -0.01409 0.247 0.030451 0.31547 0.075472 1.0859 0.26954 0.027919 0.36821 0.0048579 -0.10973 -0.10062 -0.04211 0.29056 -0.0063668 -0.010794 0.13332 0.13509 -0.018857 0.60178 0.27143 -0.0015243 -0.11365 0.19886 -0.015741 0.47512 -0.0059522 -0.065447 0.018943 -0.00041585 -0.18118 0.54735 0.03863 0.021183 0.033831 0.41195 0.032281 0.027357 0.0055529 -0.013569 -0.2744 0.7919 0.20289 0.025329 0.44206 0.039761 -0.035993 0.60124 0.44884 -0.0058363 0.015587 0 -0.014228 0.43323 0.0026357 -0.041159 0.042024 -0.0055375 -0.03395 0.15427 -0.0098185 -0.013677 0.16967 -0.014916 -0.044822 -0.0067813 0.35496 0.071391 0.044148 0.076854 0.31739 0.069095 0.037359 -0.11129 -0.033814 0.073992 -0.014366 0.0029133 -0.0085766 -0.004868 0.014402 -0.0099565 0.011958 0.011958 0.56792 0.0039813 -0.017941 -0.018353 0 0.7781 0.55018 0.0024969 -0.0012473 0.0048579 0.0024969 0.033721 0.21066 -0.0023553 0.014051 0.039761 0 0.058081 0.019223 0.0033299 -0.016292 0.0044411 0.016286 0.063509 0.12064 0.015727 0.78215 -0.0031859 0.64543 -0.005261 0.68943 0.46981 -0.02562 0.33918 0.34119 0.6831 0.011539 0.085943 0.22901 -0.0008316 0.032845 0.10701 -0.0040162 -0.010922 0.087969 0.38998 -0.0059522 0.0058309 -0.33369 -0.47841 0.044889 -0.015329 0.016845 0.10994 0.88492 -0.0040162 0.023058 -0.084926 -0.040616 0 -0.014778 -0.0015243 0.35251 -0.17082 0.035358 1.8528 -0.005814 Amplification Peak 12 - CN values 16q12.1 chr16:51079810-53017796(probes 1290081:1291551) chr16:51900872-51992614(probes 1290699:1290768) chr16:51900872-52035275(probes 1290699:1290803) 0.08701 0.20971 Actual Copy Change Given -0.0044312 0.048155 -0.0085917 -0.20049 0.074848 -0.0059522 -0.5427 0.28319 -0.33479 -0.0038779 0.012934 0.33193 -0.012024 0.5345 2.7272 0.36395 0.38105 0.1933 -0.005261 0.42503 -0.0076101 0.36137 -0.02562 0.037886 -0.024661 -0.03095 -0.10424 0.34551 0.041741 0.0037063 0.61625 0.52765 -0.0023553 0.072684 -0.011198 -0.014916 0.040751 0.35414 0.0052749 0.062508 0.28834 -0.0060904 0.69167 -0.028355 -0.094667 0.0017481 -0.21119 0.021569 -0.0063668 0.37183 0.0054139 -0.0045695 0.042732 -0.052261 0.0021433 0.057083 -0.020412 0.024489 -0.0075293 0 -0.025072 0.004719 0.0054139 0.0066653 -0.028218 -0.03857 -0.018216 0 -0.027398 -0.01354 0.042307 -0.02154 0.015727 0.053521 0.040703 -0.0047079 -0.0092666 -0.014228 -0.010508 0.46024 -0.018628 -0.011511 0.023987 0.49764 -0.019314 0.31835 0.60313 -0.0008316 0.033972 0.13694 0.054664 0.24945 0.46695 -0.0085766 -0.0099565 -0.029448 0.060382 0.30999 0.035524 3.6569 -0.027808 0.015447 0.013215 -0.019314 -0.0031859 -0.095342 0.046247 -0.0012473 0.20275 -0.0089906 -0.0023553 0.72123 0.0016642 -0.0056908 0.23628 -0.25491 0.33723 0.063865 0.053664 0.0091705 0.0055092 0.044007 -8.1157e-05 0.41647 -0.0070576 0 0.03031 0.0066653 0.5142 -0.029857 0.018638 -0.045919 -0.0087146 -0.006505 -0.38739 0.19793 0.73534 0.67292 -0.018628 0.82018 0.078438 -0.029448 0.49822 -0.015271 -0.0067813 0.018383 0.32294 0.00061053 0.018663 -0.0060904 0.3771 0.25793 0.53876 -0.010746 0.50985 -0.026714 -0.01116 -0.017648 0.11946 0.48494 0.01082 -0.00069303 0.010703 0.0053389 0.5865 0.23969 -0.59701 0.0013972 0.56561 0 0.091408 0.057421 0.54559 -0.0075486 0.031718 0.29772 -0.0030445 -0.0062286 0.013772 -0.0030475 -0.062764 -0.031847 0.060651 -0.0066387 0.53309 -0.010542 -0.032996 0.033754 -0.0083502 -0.044144 0.20305 -0.010646 0.072971 0.058224 -0.032996 -0.020824 0.029606 0.55822 -0.017391 0.043299 0.39795 0.01419 0.030451 -0.0067813 0.0066653 -0.013127 0.0013937 0.37166 -0.0049844 0.034818 0.034959 -0.025268 0.0015255 -0.027261 0.095798 0.044398 -0.011775 0.00076866 -0.05571 -0.0051227 0.39446 0.0049969 -0.0072886 0.41479 -0.016017 -0.0040162 0 -0.013264 0 -0.0096806 -0.030267 0.19984 0.15449 -0.0095426 0.12432 -0.010508 -0.14258 -0.72137 0.010842 0.086956 -0.010508 -0.10753 0.33966 0.02539 0.19406 -0.0068415 -0.0016629 0.24187 -0.37966 -0.017666 0.48307 0.0073609 -0.017391 -0.014916 0.012934 -0.12841 -0.01221 0.1628 -0.020549 0.024969 -0.0060904 0.31257 -0.0073339 -0.00039423 -0.0094332 0 -0.0094046 0.4834 0.43969 0.037217 -0.25031 0.71791 -0.58441 -0.013402 0.066372 0.0068044 0.20641 0.010087 0.050961 -0.005261 -0.013127 0.34713 0.00013863 0.26294 -0.014916 -0.0026322 -0.027398 0.76359 -0.019804 0.45888 -0.2514 -0.012162 -0.0094618 -0.0049844 0.070099 -0.0123 -0.016602 0.37776 -0.03095 0.019503 -0.01409 0.247 0.030451 0.010295 0.075472 0.50776 0.26954 0.027919 0.36821 0.0048579 -0.10973 -0.10062 -0.04211 0.29056 -0.0063668 -0.010794 0.13332 0.13509 -0.018857 0.60178 0.27143 -0.0015243 -0.11365 0.19886 -0.015741 0.47512 -0.0059522 -0.018216 0.018943 -0.00041585 -0.18118 0.54735 0.03863 0.021183 0.02511 0.41195 0.032281 0.027357 -0.29307 -0.013569 -0.2744 0.7919 0.20289 0.012315 1.3448 0.039761 -0.035993 1.1364 2.3394 -0.015191 0.015587 0 -0.014228 0.43323 0.0026357 -0.041159 0.042024 -0.0055375 -0.03395 0.15427 -0.0098185 -0.013677 0.16967 -0.014916 -0.044822 -0.0067813 0.35496 0.071391 0.044148 0.076854 0 0.069095 0.037359 -0.11129 -0.033814 0.073992 -0.014366 0.0029133 -0.0085766 -0.004868 0.014402 -0.0099565 0.011958 0.011958 0.56792 0.0039813 -0.010508 -0.018353 0 0.7781 0.55018 0.0024969 -0.0012473 0.0048579 -0.015191 0.033721 0.21066 -0.0023553 0.014051 0.039761 0 0.058081 0.019223 0.0033299 -0.016292 0.0044411 0.016286 0.063509 0.12064 0.015727 -0.025209 -0.0031859 0.017404 -0.005261 0.68943 0.46981 -0.02562 0.33918 0.35463 2.8548 0.011539 0.085943 0.22901 -0.0008316 0.032845 0.10701 -0.0040162 -0.010922 0.087969 -0.046989 -0.0059522 0.0058309 -0.33369 -0.47841 0.044889 -0.015329 0.016845 0.10994 0.88492 -0.0040162 0.023058 -0.071205 -0.040616 0 -0.014778 -0.0015243 0.35251 -0.17082 0.035358 0.41865 -0.005814 Amplification Peak 13 - CN values 17p11.2 chr17:21123837-21305391(probes 1323638:1323700) chr17:21124724-21176221(probes 1323639:1323669) chr17:21113837-25270799(probes 1323633:1323702) 0.053892 0.12324 Actual Copy Change Given 0.35023 1.9671 0.55335 -0.51887 -0.81268 0.0049969 -0.5294 -0.86141 -0.11639 0.0044411 -0.21565 -0.413 0.004445 -0.83873 -0.82362 -0.023292 0.42805 -0.40074 -0.0092666 -0.71871 -0.65239 -0.007472 0.35953 -0.41655 -0.020275 0.13022 -0.46411 -0.26167 -0.7874 0.29577 0.12314 -0.18547 0.0054139 0.079159 -0.007472 0.00597 0.56952 0.77156 -0.44717 -0.55317 -0.7295 0.0012481 0.32818 -0.41388 -0.16673 -0.56061 0.052099 -0.79246 0.0094491 0.09304 0.0079175 -0.0062286 0.060079 -0.00013862 -0.0056132 -0.75271 1.6667 0.012934 -0.57095 0.010703 -0.028691 -0.5792 -0.5713 -0.70334 -0.03504 -0.075078 -0.029857 -0.62383 -0.014778 -0.0037395 -0.83788 -0.012215 -0.81515 -0.55487 -0.49416 -0.43691 -0.76937 -0.020525 -0.010508 -0.024503 -0.031905 -0.0037395 -0.0084385 -0.31766 0 -0.087447 -0.6941 -0.0073339 -0.7302 -0.77409 -1.0775 -0.50869 -0.45423 0.001803 0.0083351 -0.038034 -0.0042929 -0.67976 0.051103 -0.49986 -0.92301 -0.71239 -0.53442 0.00097064 -0.010508 -0.43225 -0.75316 0.00083195 -0.58064 -0.018353 0.0014958 1.9284 -0.017254 -0.55587 -0.00027724 -0.25612 -0.70917 -0.22963 -0.79928 0.0094491 0.016705 0.053379 -0.0027146 0.42234 0.011261 0.0037139 -0.23323 0.70513 0.45615 -0.054825 0.021298 0.10235 -0.016154 -0.0098185 0.098706 0.34331 -0.53836 -0.018877 -0.02562 0.36033 -0.77922 -0.03095 -0.55567 0.0017228 -0.039665 0.04697 0.32197 -0.74025 -0.029175 -0.00055444 -0.64593 -0.6041 -0.54055 0.044329 -0.18068 -0.52839 -0.00089686 -0.63139 0.10351 -0.36351 0.018622 0.011539 0.010285 -0.67837 -0.57625 0.54249 0.10468 -0.51753 -0.56266 -0.84323 0.10114 0.84548 -0.43843 0.01166 -0.98259 -0.32449 0.011542 0.011818 -0.36618 -0.026988 -0.026304 -0.0014349 -0.60404 0.019643 -0.3933 0.0041632 -0.017529 -0.11803 -0.010912 -0.69866 -0.26384 0.0114 0.074919 0.054376 -0.81104 -0.0013858 0.026795 0.037554 -0.33017 -0.71051 -0.83381 0.021323 -0.5939 0.00027728 0.031999 0.0044644 -0.95927 -0.28323 0.0019418 0.028279 -0.84923 -0.0089118 0.00027728 -0.059269 -0.75504 -0.95057 -0.012739 -0.81231 -0.098888 -0.0040162 -0.43897 0.0012481 0.0024036 -0.37853 0.0013868 -0.58274 1.8124 -0.00097017 -0.4381 -0.0073339 -0.19149 -0.23496 -0.32011 -0.009831 -0.17897 0.0026357 -0.93622 -0.73152 0.012237 -0.4013 0.0048259 0.061937 -0.13113 -0.60979 -0.22658 0.025952 0.010006 -0.064508 -0.37651 -0.023292 -0.025788 -0.71953 -0.014641 -0.020138 -0.14695 -0.84631 -0.00055444 -0.40926 -0.89787 0.034254 -0.53855 -0.0012473 0.24373 0.023728 -0.0087234 -0.39196 -0.041974 -0.71937 0.083342 0.033127 0.11492 -0.60574 -0.59263 -0.0008316 -0.82847 0.0034687 -0.4342 -0.87762 -0.29568 0.0072217 0.0040243 0.45088 0.018279 -0.23814 -0.021373 0.00069327 -0.029584 -0.82753 0.0076392 -0.4644 -0.22924 0.0027745 0.020623 -0.0080244 0.089561 -0.0071958 -0.014126 -0.02753 -0.09987 0.0093098 -0.023429 -0.6508 -0.47152 -0.47066 0.177 -0.37909 -0.017254 0.027919 -0.029994 0.0066653 -0.16155 0.036554 -0.22355 -0.39664 0.015447 0.00068294 0.10031 -0.41553 0.0049969 -0.7732 -0.32193 0.014051 -0.6147 -0.7238 0.00013863 -0.63989 0.00083195 -1.0116 -0.36386 -0.00041585 0.32801 -0.73888 -0.059135 -0.42637 -0.65351 -0.50722 -0.82578 -0.78883 0 -0.0030475 -0.64743 -0.82989 -0.67609 -0.26148 -0.42637 -0.0047079 1.317 -0.62217 -0.14477 0.017824 -0.57565 0.060794 -0.0073339 -0.48693 -0.11721 0.24435 -0.53561 0.0027745 -0.03286 -0.23386 -0.0013858 -0.0018014 -0.61594 0.0085064 -0.043466 -0.71346 -0.28513 -0.77583 -0.77821 -0.076945 -0.69378 -0.46408 -0.69296 -0.050212 -0.79394 0.061523 0.0043021 0.010424 0.0044411 0.84787 0.3785 -0.80534 -0.0055375 3.4539 0.081756 0.0093098 -0.69305 -0.0094046 0.42234 -0.043331 -0.37065 -0.14155 -0.0085766 0.01185 0.017544 -0.030647 0.18461 -0.49996 0.02539 -0.53835 0.0093098 -0.51404 0.0062481 -0.005261 -0.0077482 0.012097 0.0054139 -0.94247 0 0.45122 0.41848 0.0037465 -0.49798 0.0029133 -0.73906 0.48148 0.0020805 -0.49131 -0.43983 0.35773 -0.52665 1.8632 -0.28073 0.0033299 0.0013868 -0.041253 0.0022193 0.0043021 -0.29282 -0.43235 0.0072217 0.010424 0.021784 -0.38875 -0.63356 -0.0063668 -0.76407 -0.73743 -0.55387 -0.63519 0 -0.88774 -0.5245 -0.88573 -0.8575 0.001747 -0.53104 -0.65631 0.032845 -0.81005 -0.00013862 Amplification Peak 14 - CN values 17q12 chr17:37837542-38021723(probes 1329245:1329350) chr17:37942740-37965868(probes 1329329:1329339) chr17:35048714-39934521(probes 1327937:1330275) 2.3738e-14 1.1969e-13 Actual Copy Change Given 0.35023 0.01447 0.55335 0.19 0.087109 0.0049969 0.067375 0.35569 -0.11639 0.0044411 0.15577 0.23055 0.004445 1.0201 -0.021098 -0.023292 0.019176 -0.03504 -0.0092666 0.071043 -0.5898 -0.007472 0.35953 0.050781 -0.020275 0.13022 0.42448 -0.26167 0.024268 0.026318 0.12314 0.78049 0.0054139 0.079159 -0.007472 0.00597 0.56952 0.17226 0.41982 0.082621 0 0.0012481 0.32818 0.3033 -0.16673 0.031577 0.052099 0.73867 0.0094491 0.09304 0.0079175 -0.0062286 0.11173 -0.00013862 -0.0056132 0.042449 -0.026304 0.012236 0.038148 0.010703 -0.025756 0.48716 0.55248 0.68459 -0.03504 0.6653 -0.029857 0.014829 -0.014778 -0.0037395 3.3044 -0.012215 0.046984 -0.55517 0.50267 -0.43691 1.4331 -0.020525 -0.010508 -0.024503 1.0342 -0.0037395 -0.0084385 0.22571 -0.00096957 -0.087447 0.89317 -0.0073339 0.069812 0.0082626 -0.32379 0.0083008 0.43349 0.001803 0.0083351 1.4861 -0.0042929 -0.67976 0.051103 0.019083 -0.014916 0.012516 -0.53442 0.00097064 -0.010508 -0.44091 0.033945 0.00083195 -0.37748 -0.018353 0.0081959 0.69103 -0.017254 0.029466 -0.00027724 -0.25612 0.05694 0.22615 0.13406 0.49441 0.016705 0.1345 -0.0027146 0.022024 0.011261 0.0037139 -0.23323 0.70513 0.45615 -0.054825 0.023541 0.10235 -0.016154 -0.0098185 0.098706 0.012997 -0.51197 -0.018877 -0.02562 0.36033 0.09304 -0.03095 0.060365 0.0017228 -0.039665 0.04697 0.32197 -0.030485 -0.034864 -0.00055444 0.066629 0.30011 3.6569 0.044329 3.6569 0.99115 -0.00089686 0.048281 0.10351 -0.36351 0.018622 0.011539 0.010285 0.067247 -0.06585 0.54249 0.10468 -0.0093943 0.023145 0.15935 0.10114 0.064902 -0.43843 0.01166 0.022585 0.30697 0.011542 0.011818 -0.36533 3.6569 -0.026304 0.0043021 0.080601 0.019643 -0.3933 0.0041632 -0.017529 1.1509 -0.010912 -0.074544 -0.26384 0.0114 0.074919 0.054376 0.74423 -0.0013858 0.026795 0.037554 -0.33017 0.7756 0.7984 0.021323 0.015028 0.00027728 0.031999 0.0044644 0.85255 -0.28323 0.0019418 0.028279 -0.82984 -0.0089118 0.00027728 -0.059269 -0.18697 -0.95057 -0.012739 0.023783 3.6569 -0.0040162 0.14073 0.0012481 0.0024036 0.029044 0.0013868 0.016283 3.6569 -0.00097017 0.42133 -0.0073339 -0.19149 -0.23496 0.241 -0.009831 -0.17897 0.0026357 0.39811 0.013772 0.012237 0.06537 0.0048259 3.6569 -0.13113 0.047268 -0.22653 0.025952 0.010006 -0.064508 -0.37651 -0.023292 0.72183 -0.0045695 -0.014641 -0.020138 -0.044957 0.037446 -0.00055444 0.0282 -0.0053992 0.034254 -0.091949 -0.0012473 0.24373 0.023728 -0.0087234 0.7864 -0.041974 0.21118 0.083342 0.033127 0.11492 0.064225 3.1174 -0.0008316 0.094637 0.0034687 -0.4342 0.88958 -0.29568 0.0072217 0.0040243 1.4926 0.020343 0.39031 -0.021373 0.00069327 -0.029584 -0.34119 0.0076392 0.011294 -0.22924 0.0027745 0.020623 -0.0080244 0.089561 -0.0071958 -0.014126 -0.02753 -0.063166 0.0093098 -0.023429 0.21745 0.04344 0.28803 1.7655 0.39197 -0.017254 0.027919 -0.029994 0.0066653 -0.16155 0.036554 -0.22355 0.17513 0.015447 0.00068294 0.10031 0.14816 0.0049969 0.62861 0.29024 0.014051 0.069517 0.068029 0.00013863 -0.020138 0.00083195 0.31097 0.57844 -0.00041585 0.32801 0.042024 -0.059135 -0.42637 0.030169 0.40411 0.040044 0.74157 0 -0.0030475 0.035665 0.72501 0.24934 -0.26148 0.42923 -0.0047079 2.4238 0.62224 -0.14477 0.017824 0.024969 0.060794 -0.0073339 -0.01495 0.015002 0.24435 0.021183 0.0027745 -0.03286 0.53643 -0.0013858 -0.0018014 -0.23325 0.0085064 -0.043466 0.62061 0.18344 3.6569 0.044699 -0.076945 -0.084528 -0.46408 -0.69296 -0.025072 -0.038442 0.061523 0.0043021 0.010424 0.0044411 0.18672 0.01189 0.013074 -0.0055375 0.028481 0.085943 0.0093098 -0.0048461 -0.0094046 0.42234 -0.043331 -0.37065 -0.012713 -0.0085766 0.01185 0.017544 -0.030647 0.17087 0.0022193 0.02539 0.051387 0.0093098 -0.50173 0.0062481 -0.005261 -0.0077482 0.012097 0.0054139 -0.39764 0 0.021043 0.41848 0.0037465 0.45803 0.0029133 0.014609 0.48148 0.0020805 0.34421 0.35173 0.35773 0.016006 0.46314 0.11829 0.0033299 0.077142 -0.041253 0.0022193 0.0043021 0.023426 0.3104 0.0072217 0.010424 0.021784 -0.38875 -0.62339 -0.0063668 -0.028553 0.73332 -0.55387 0.56472 0 -0.42068 0.40193 0.94647 -0.011749 0.001747 -0.53104 0.2697 0.055515 0.023426 -0.00013862 Amplification Peak 15 - CN values 17q24.1 chr17:63179119-68650398(probes 1341759:1345137) chr17:63624948-63696135(probes 1342083:1342136) chr17:63369160-66551009(probes 1341914:1343727) 0.00359 0.11331 Actual Copy Change Given 0.35023 0.82079 0.55335 0.19 0.087109 0.0049969 0.067375 0.35569 -0.11639 0.0044411 -0.19537 0.23055 0.004445 1.0201 0.59278 -0.023292 0.019176 -0.03504 -0.0092666 0.071043 -0.5898 -0.007472 0.35953 0.050781 -0.020275 0.13022 0.42448 -0.26167 0.024268 0.026654 0.12314 0.30667 0.0054139 0.079159 -0.007472 0.00597 0.56952 0.17226 0.41982 0.063939 0 0.0012481 0.32818 0.3033 -0.16673 0.031577 0.052099 2.2486 0.0094491 0.09304 0.0079175 -0.0062286 0.11173 -0.00013862 -0.0056132 0.052383 -0.026304 0.012236 0.038148 0.010703 -0.011861 0.48716 0.55248 0.68459 -0.03504 0.68273 -0.029857 0.017624 -0.014778 -0.0037395 0.038913 -0.012215 0.046984 -0.56724 0.50267 -0.014245 -0.014503 -0.014228 -0.010508 -0.024503 -0.036401 -0.0037395 -0.0084385 0.0053684 -0.00096957 -0.087447 -0.67154 -0.0073339 0.043621 0.0082626 -0.32379 0.0083008 0.43349 0.001803 0.0083351 1.4861 -0.0042929 -0.70926 0.051103 0.019083 -0.0084385 0.012516 -0.53442 0.00097064 -0.010508 -0.4505 0.021996 0.00083195 -0.091108 -0.018353 0.0081959 0.68842 -0.017254 0.029466 -0.00027724 -0.25612 0.05694 0.22615 0.13406 -0.47448 0.016705 0.1345 -0.0027146 0.010842 0.011261 0.0037139 -0.10581 0.73151 0.45615 -0.054825 0.02242 0.10235 -0.016154 -0.0098185 0.098706 0.012997 -0.52481 -0.0077226 -0.02562 0.36033 0.10599 -0.019314 0.060365 0.0017228 1.4331 0.04697 0.32197 -0.11269 -0.00041585 -0.00055444 0.058367 0.28913 -0.45488 0.042913 0 0.036794 -0.00089686 0.048281 0.11668 -0.52009 0.018622 0.011539 0.019503 0.067247 -0.06585 0.54249 0.10468 1.0698 0.023145 0.15935 0.10114 0.83642 -0.43843 0.01166 0.031859 0.30697 0.011542 0.010703 -0.36558 -0.0012473 0.64103 0.036088 0.080601 0.019643 -0.38031 0.023005 -0.017529 1.1509 -0.010912 -0.074544 -0.26384 0.018383 0.074919 0.054376 0.74423 -0.0013858 0.026795 0.037554 -0.33017 -0.68779 0.7984 0.021323 0.015028 0.00027728 0.033408 0.0079175 0.95591 -0.29467 0.0019418 0.028279 3.6569 -0.0089118 0.00027728 -0.059269 -0.7559 -0.97123 -0.016455 0.1147 3.6569 -0.0040162 0.14073 0.0012481 0.0024036 0.029044 0.0013868 0.030451 0.42957 -0.00097017 0.42133 -0.0073339 -0.19149 -0.23496 0.241 -0.0051227 -0.17897 0.0026357 0.39811 0.010703 0.012237 0.50273 0.0048259 0.11985 -0.038015 0.047268 0.079303 0.022202 0.010006 -0.064508 -0.37651 -0.020412 -0.0044636 -0.0045695 -0.014641 -0.020138 -0.0085766 0.031804 0.018243 0.0282 -0.0053992 0.034254 -0.091949 -0.0012473 0.24373 0.023728 -0.0056757 -0.30979 0.0086135 0.21118 0.083342 0.033127 -0.11008 0.064225 1.5685 -0.0008316 0.094637 0.0034687 -0.4342 0.88958 -0.29568 0.0072217 0.0040243 -0.070001 0.027778 0.39031 -0.021373 0.00069327 -0.029584 -0.34119 0.0076392 0.020203 -0.22924 0.0027745 0.020623 -0.0080244 0.089561 -0.0071958 -0.014126 -0.02753 -0.061012 0.0093098 -0.023429 0.21745 -0.46717 0.28803 0.17436 0.39197 -0.017254 0.027919 -0.029994 0.0029133 -0.16155 0.036554 -0.22355 0.17513 0.0025622 0.00068294 0.10031 0.14816 0.0049969 0.68161 0.29024 0.014051 0.069517 -0.7276 0.00013863 -0.020138 0.00083195 0.86295 0.57844 -0.00041585 0.32801 0.042024 -0.059135 -0.42637 0.6392 0.40411 0.036653 0.74157 0 -0.0030475 0.035665 -0.0064367 0.24934 -0.27146 0.42923 -0.0047079 1.3781 0.62224 -0.14477 0.017824 0.024969 0.060794 -0.0073339 -0.01495 0.015002 0.24435 0.021183 0.0027745 -0.03286 0.74956 -0.0013858 -0.0018014 -0.23325 0.0085064 -0.043466 0.0051359 -0.3856 0.45564 0.046133 -0.076945 -0.074558 -0.46408 -0.69296 -0.025072 -0.038442 0.061523 0.0043021 0.010424 0.0044411 0.18672 0.01189 0.013074 -0.0055375 0.028481 0.071966 0.0093098 -0.14515 -0.0094046 0.42234 -0.043331 -0.37065 -0.0030475 -0.0085766 0.0084743 0.017544 -0.030647 -0.4404 0.0022193 0.02539 0.051387 0.0093098 -0.51032 0.0022193 -0.005261 -0.0077482 0.012097 0.0054139 -0.41999 0 0.021043 0.43665 0.0037465 0.45803 0.0029133 0.014609 0.48148 0.0020805 0.34421 0.36936 0.35773 0.016006 0.46314 0.11829 0.0033299 0.083342 0.00458 0.0022193 0.0043021 0.19725 0.3104 0.0072217 0.010424 0.021784 -0.41089 0.061111 -0.0063668 -0.028553 0.73332 -0.55387 0.56472 0.025443 -0.41871 1.4882 0.94647 -0.011749 0.001747 -0.53104 0.2697 0.066086 0.023426 -0.00013862 Amplification Peak 16 - CN values 19q13.11 chr19:32351550-33019554(probes 1405138:1405612) chr19:32672695-32682474(probes 1405401:1405408) chr19:31637135-33022356(probes 1404653:1405614) 0.0075046 0.0075046 Actual Copy Change Given 0.13878 0.032422 0.50896 -0.090777 0.020771 -0.015604 0.020483 0.74261 0.23783 -0.0012473 0.025952 0.25386 -0.030404 -0.024935 -0.06652 -0.030131 -0.00013862 0.35888 -0.0123 0.31514 -0.027808 -0.013264 0.83864 2.403 -0.049695 0.20366 0.28323 0.014749 0.032986 0.28089 -0.028901 -0.015886 -0.011887 0.06208 -0.036674 -0.019452 0.024408 0.46127 -0.0059522 0.054091 -0.041024 -0.005814 0.20335 0.21422 0.021488 0.0022193 0.25755 0.018209 -0.0083005 0.3206 -0.024203 -0.020138 0.011261 -0.012438 -0.012927 0.1492 0.39015 0.0059157 -0.06067 0.012237 -0.031632 -0.061286 -0.012162 -0.022469 1.6665 0.60322 -0.043466 0.03011 -0.0060904 -0.018216 -0.014503 -0.036045 -0.021784 0.04954 0.4828 1.0136 -0.0094046 -0.028901 -0.021373 -0.0085766 -0.02603 -0.021098 0 -0.066698 0.022024 -0.13264 0.61471 -0.020824 0.033059 -0.031157 0 0.56859 -0.0088115 -0.015054 -0.021235 -0.10815 -0.0047079 0.046417 0.01306 -0.14181 -0.056173 -0.0083005 -0.0076465 -0.027398 -0.03817 -0.14811 0.029297 -0.024798 0.0043516 -0.032041 -0.014366 0.01539 -0.025209 -0.013264 -0.0024938 0.41262 0 -0.22779 0.16715 -0.00069303 0.0097138 -0.091023 -0.017885 0.49027 -0.0044312 0.0032 -0.011865 0.3395 0.40928 0.61371 0.006919 -0.082633 -0.020687 -0.012713 0 -0.060837 0.55283 -0.073986 -0.046583 -0.09342 0.013213 -0.006505 0.42385 -0.0096922 0.43226 0.018943 -0.067925 0.027835 -0.075596 -0.033132 -0.30815 -0.16866 -0.040043 0.022343 -0.13652 -0.042381 -0.017353 0.001683 0.42957 -0.5442 -0.0020784 0.0097276 -0.0069195 -0.7077 0.0013868 -0.027671 -0.24399 -0.060201 0.015688 0.11949 0.11239 0.049786 0.092349 -0.032605 -0.021647 -0.030677 -0.028625 -0.0040162 -0.010232 0.044287 -0.12099 -0.022058 0.06069 -0.017529 0.038913 0.040044 0.80092 0.029389 -0.011247 0.5516 0.17784 -0.012851 0.042732 -0.029448 2.5184 -0.039394 0.026795 -0.051534 -0.046854 -0.00011563 1.5638 0.022024 -0.010646 -0.018902 0.011121 -0.021493 -0.051856 -0.29037 -0.014778 -0.43333 0.033408 0.002715 -0.0012473 0.75846 0.029044 1.0669 0.048235 0.0025724 0.67297 -0.039122 -0.37861 -0.01904 -0.010877 0.0056919 -0.00013862 0.0011093 3.0034 -0.012713 -0.020549 -0.02889 0.17905 0.24202 -0.024737 -0.016841 0.072396 -0.017941 0.64378 -0.69369 0.0041632 2.5457 0.00041593 -0.030851 -0.02384 0.042024 0.14712 0.0049969 -0.011611 -0.081738 0.73511 -0.038714 0.31398 -0.022881 -0.020138 -0.034768 0.074265 0.0059165 -0.01645 -0.12291 -0.097967 0.033127 -0.16739 -0.011198 3.0901 0.032726 -0.020149 0.026373 -0.0068358 0.17802 -0.025893 0.37644 -0.016567 0.073402 -0.061 0.19938 0.060365 0.028481 -0.0092008 0.0096688 0.078871 -0.01106 0.0053364 0.25339 0.017404 -0.088242 0.40861 -0.013677 -0.06719 -0.79154 -0.0029091 0.36068 0.22407 -0.02151 0.006109 -0.022058 0.10249 -0.026851 -0.025107 0.058229 0.6403 0.47135 -0.028628 -0.082934 0.054803 0.19239 0.22582 -0.011611 0.048554 0.021463 0.68533 0.017684 0.46228 0.14791 -0.028159 0.025531 0.51089 -0.017814 0.21945 0.11023 -0.028218 0.5539 -0.010646 0.0062481 0.018095 0.055738 -0.010508 -0.054016 -0.0087146 -0.11926 0.17272 -0.023977 0.04259 -0.080541 -0.057116 -0.39908 0.017963 0.27222 -0.024388 0.045991 0.07369 -0.020542 -0.033195 -0.045297 -0.23374 0.024627 0.31883 0 1.28 0.032704 0.0083351 0.0077783 0.024829 0.021183 -0.02384 -0.014124 -0.012713 -0.022606 -0.0029091 -0.021784 0.47049 0.44799 -0.023429 0.39944 0.20457 -0.006505 1.5818 -0.048342 -0.015741 0.048404 0.028481 0.015745 -0.031632 0.044715 0.041741 -0.026652 -0.1109 0.0094617 -0.027124 0.0069435 -0.032371 -0.10265 -0.011816 -0.016007 0.0016642 0.011121 0.49372 0.0058309 -0.050776 -0.023155 -0.024251 0.63591 0.072396 -0.020275 0.47529 0.00597 0.018523 0.024158 -0.21704 -0.017529 0.029044 0.0069435 -0.38078 0.053237 -0.016979 0.40094 -0.025622 0.017404 0.010285 -0.39363 0.28277 -0.0011087 0.45428 0.0041632 0.0062481 0.0058309 0.016146 0.016705 -0.042381 0.21837 0.30873 -0.025346 -0.0036011 -0.30463 0.29421 -0.0045695 0.018243 -0.007472 -0.0030475 -0.027029 0 0.071535 0.13228 0.0079175 -0.0085363 -0.47112 0.051988 -0.014228 -0.0042929 -0.047801 0.018663 0.34795 -0.030216 -0.041838 0.41881 -0.021558 -0.049965 -0.012989 0.34648 -0.20772 0.034818 -0.014228 0.0023581 Amplification Peak 17 - CN values 20p12.1 chr20:14111361-15879423(probes 1425603:1426494) chr20:14245839-14352640(probes 1425673:1425729) chr20:14245839-14454728(probes 1425673:1425761) 0.10459 0.16298 Actual Copy Change Given 0.71476 0.84909 -0.00056965 -0.047666 -0.8126 -0.006505 -0.061555 2.3974 0.71152 -0.00069303 0.26702 0.93956 0.017963 -0.24667 0.018523 1.5749 0.84337 0.62806 0.52223 0.88786 -0.0037024 0.043582 0.31145 0.35932 -0.011611 1.3413 -0.36377 0.46874 0.83864 0.0034687 2.4719 -0.4316 0.0041632 -0.66485 0.012934 0.0072217 -0.84683 -0.49235 0.66567 0.056655 -0.73976 0.0015255 1.4534 -0.3543 0.27871 -0.11124 -0.25201 0.68491 0.031014 0.038489 0.023426 -0.00041585 0.36428 -0.0011087 0.0029385 0.90875 -0.066118 1.8696 1.062 0.41446 0.0015255 1.9914 0.017544 -0.69938 -0.013677 0.67783 -0.79928 0.35162 0.65387 0.0062481 -1.2716 -0.010975 -0.79628 0.70157 -0.39723 -0.0059522 -0.015191 0.0034687 -0.046718 -0.014228 0.52888 0.64543 -0.84499 0.82777 0.70795 -0.69135 -0.70724 0.0068044 0.77714 -0.094397 0.97791 0.58377 -0.46931 -0.0044312 0 0.75261 0.93976 0.0090312 -0.42484 1.2644 -0.01409 0.0084743 0.52551 -0.0059522 0.011852 0.73303 0.76609 0.0077783 0.88291 0.71622 0.0040243 0.70956 0.0040243 -0.55457 0.28074 3.6569 1.602 0.77743 -0.80931 0.88546 0.77949 -0.75676 0.0053312 1.5504 0.0079175 0.057796 0.43851 -0.5293 -0.019726 0.71697 -0.68325 -0.019314 0.0024969 -0.0037395 0.040751 -0.48592 0.74746 0.81926 0.56472 1.2987 0.11038 0.0087528 0.52118 -0.0017429 -0.00013862 -0.59549 1.36 1.074 -0.10434 0.018243 1.0143 -0.59341 -0.013096 0.033165 0.74803 0.21776 0.025569 0.064387 0.50811 0.96681 0.021323 0.01447 0.019083 -0.70984 0.00027728 1.0323 -0.263 1.6341 -0.099999 0.11052 1.9523 1.9533 1.6976 0.0073421 0.98928 0.84814 0.7406 0.60124 0.75127 0.060508 1.9188 -0.011473 -0.6295 0.0081413 -0.40119 0.0041632 0.85838 1.1064 0.12029 -0.032587 -0.72013 -0.016841 1.0538 0.74956 1.3978 -0.005814 0.0081959 1.8636 0.31257 -0.69821 0.67048 0.90392 -0.57002 -0.0044312 0.036935 0.018803 0.013772 0.92411 0.0013868 0.4844 -0.79978 0.013293 0 0.80344 0.51961 -0.98541 0.62839 1.6363 0.81697 0.0054139 1.1905 0.80344 0.0014323 -0.37595 0.51978 -0.034359 -0.018765 -0.005814 0.35904 0.20427 0.81845 0.74176 0.28255 -0.52542 -0.062495 0.0024969 2.9526 -0.057116 0.014609 -0.41597 0.0087528 0.9674 0.38138 -0.65538 0.067805 -0.00055444 0.010842 1.2971 0.85561 0.13865 0.76883 -0.69541 -0.005261 -0.0060904 0.30873 0.063454 0.030873 0.29899 0.78485 0.0066653 0.26954 -0.15195 0.015447 0.81848 -0.006505 0.44935 0 2.4531 -0.22539 -0.55066 0.68757 -0.61556 0.51403 0.27222 1.4259 0.0086298 0.98535 1.7019 -0.35818 0.00458 0.072971 1.5509 0.22808 -0.40852 0.47238 0.0030522 0.0057066 0.8246 -0.0018014 -0.46993 1.2188 -0.00069303 0.0072217 0.034818 -0.50921 0.00027728 -0.0015599 0.44953 -0.022195 0.94078 -0.0016629 -0.19087 0.036794 0.92109 0.85336 -0.36624 0.49649 -0.52757 -0.04428 -0.0029091 1.0998 0.12113 1.3272 0.99987 0.98618 -0.0023656 0.7982 -0.12043 0.75269 1.3515 0.010842 -0.3592 -0.62485 -0.72265 0.25402 0.24171 0.0022193 -0.032587 -0.35922 1.386 0.27963 0.03214 0.039195 0.84356 0.27521 0.4326 -0.18005 -0.80202 0.2958 -0.005261 0.63956 -0.0047778 -0.23655 -0.29762 0.031999 0.0043021 0.0069435 -0.049424 0.47255 -0.0012473 0.016286 -0.28144 0.34518 1.2975 -0.59973 -0.039529 0.51211 0.00041593 0.24793 0.15681 0.0037465 -0.0053992 -0.23875 0.52817 1.9239 -0.56793 -0.58882 -0.66681 -0.78648 -0.84979 -0.39853 0.95161 0.057226 0.72678 0.70738 -0.89227 0.0070826 0.0043021 1.3003 0.33996 0.53775 0.062651 0.0019418 -0.85757 1.0727 0.068235 0.64561 -0.018216 0.44257 0.50307 0.058367 -0.0019399 0.00097064 0.40544 0.23938 0.037531 0.26306 0.00427 -0.27224 -0.25067 -0.14824 -0.51921 -0.58823 0.4463 -0.013677 0.62133 1.3557 -0.46844 1.2003 -0.53632 -0.034223 -0.0027707 -0.035312 0.00097064 -0.042517 0.45547 0.0067004 1.5127 1.4056 0.75356 -0.51835 0.98597 -0.25152 0.00597 0.24684 0.19725 0.0044411 -0.00055444 0.30825 1.039 0.45207 0.0036076 1.5547 0.080572 -0.65134 0.00055459 0.024127 0.35708 0.53432 2.2129 -0.69184 0.8689 0.47787 0.89554 -0.83962 0.0080567 -0.082934 -0.66365 -0.8635 0.038347 0.0012481 Amplification Peak 18 - CN values 20p11.23 chr20:19045837-20680922(probes 1429090:1430435) chr20:19563866-19571580(probes 1429560:1429567) chr20:19046760-40360025(probes 1429091:1439416) 0.0087612 0.15466 Actual Copy Change Given 0.71476 0.82001 -0.00056965 0.80772 1.2574 -0.006505 -0.061555 2.3974 0.71152 -0.00069303 0.26702 1.4649 0.017963 0.80442 0.019923 1.5749 0.84337 0.72112 0.52223 0.87428 -0.0037024 0.043582 0.31145 0.85833 -0.011611 1.5394 1.052 0.46874 0.021603 0.0034687 2.4719 -0.44146 0.0041632 -0.66485 0.030029 0.0072217 -0.83801 2.2 0.66567 0.056655 -0.73976 0.0015255 1.4502 0.32834 0.27871 -0.094988 -0.25201 1.4166 0.010564 0.72773 0.0048579 -0.0060904 0.46724 -0.0011087 0.018446 0.90875 -0.057385 1.8696 1.062 0.41446 0.0015255 1.9914 0.017544 0.67771 -0.013677 0.67783 -0.016979 0.35162 0.65387 -0.005261 -0.81745 -0.010975 -0.80252 0.047694 -0.023886 -0.0059522 -0.015191 0.0034687 -0.046718 -0.014228 0.53432 0.64543 -0.84499 0.8221 0.70795 -0.68469 -0.70724 0.001803 0.77714 -0.094397 0.97791 0.58377 -0.46931 -0.0044312 0 0.75261 0.93976 0.0090312 -0.42484 1.2644 -0.01409 -0.71693 0.52551 -0.0059522 0.024829 0.73303 1.4359 0.0077783 0.88291 0.71622 0.0029133 0.73049 0.0040243 -0.54361 0.28074 0.22391 1.6138 0.77743 -0.80931 0.88546 0.77949 -0.75676 0.0053312 1.5504 0.0079175 0.069525 0.52083 0.038065 -0.019726 0.71697 -0.68325 -0.034768 0.0024969 -0.0037395 0.36477 -0.48592 0.74746 0.81926 0.54541 1.2987 0.11697 0.059651 0.52118 -0.0017429 -0.00013862 -0.59549 1.36 1.2401 -0.039529 0.0024969 1.01 -0.59283 1.5707 0.033165 0.74803 0.21776 -0.0017632 0.064387 0.50811 0.96681 0.012934 0.01447 0.019083 -0.70984 -0.54492 1.0684 0.34517 1.6341 1.664 0.11052 1.9983 0.039016 1.6976 0.0073421 0.98928 0.84814 0.77618 0.60124 0.75127 0.059937 1.9188 -0.011473 -0.6295 0.0081413 -0.411 0.0028955 0.85838 1.1367 0.12029 -0.032587 -0.72013 -0.016841 0.10351 0.74956 1.3978 -0.005814 0.0081959 1.8636 0.31257 -0.69821 1.7503 0.90392 -0.57002 -0.0044312 0.034113 -0.00073463 3.2539 0.92411 0.0013868 0.4844 -0.78866 -0.00033671 0 0.80344 1.6652 1.1401 0.62839 1.6363 0.79809 0.0054139 1.1905 0.80344 0.0014323 -0.38018 0.51978 0.57273 -0.018765 -0.005814 0.35904 0.20427 0.82686 0.7372 0.28255 -0.0070576 0.71246 0.0024969 3.6569 -0.017391 0.014609 0.97028 0.0087528 0.96124 -0.47162 -0.39363 0.067805 -0.00055444 0.010842 1.2971 0.85363 0.13865 0.75505 -0.28893 -0.005261 -0.0060904 0.30873 0.063454 0.030873 0.29899 0.78485 0.0066653 0.26954 0.1489 0.015447 0.81848 -0.006505 0.43986 0 2.4531 -0.22539 -0.38605 0.67289 1.6627 0.51786 0.27222 1.4259 0.0086298 0.98535 1.7173 0.80967 0.00458 0.072971 1.5509 0.22808 -0.40241 0.46092 0.0030522 0.0057066 0.77607 -0.0018014 -0.46584 1.2188 -0.00069303 0.0038854 0.034818 -0.50921 0.00027728 -0.0015599 0.44953 -0.022195 0.96637 -0.0016629 0.97378 0.040185 0.96927 0.86918 -0.36624 0.49649 -0.52757 -0.039122 -0.0029091 1.065 0.12113 1.3272 0.99987 0.98618 -0.0023656 0.7982 0.50307 0.75269 1.3515 0.010842 -0.3592 -0.62751 -0.72265 0.25402 0.23876 0.0022193 -0.032587 -0.35922 1.386 0.29345 0.03214 0.039195 0.84356 0.31835 0.4326 -0.18005 0.95099 0.27995 -0.005261 0.63956 -0.01416 -0.23533 -0.29762 0.021884 0.73511 0.0069435 -0.042788 0.47255 -0.0012473 0.016286 0.18694 0.34518 1.2975 -0.59731 -0.039529 1.2625 0.00041593 0.24793 0.15293 0.00055459 -0.0053992 -0.23875 0.56596 1.2736 0.68009 -0.58882 0.63226 -0.78883 -0.83954 -0.39853 0.93589 0.057226 0.76274 -0.038034 0.97113 0.0070826 0.0043021 1.2612 0.32663 0.53389 0.0084743 0.0019418 1.9485 1.2607 0.068235 0.60377 -0.018216 0.43665 0.75223 1.8182 -0.0019399 0.00097064 0.40544 0.23938 0.037531 0.26306 0.00427 -0.27224 0.043865 -0.92077 -0.53966 -0.58823 0.4463 -0.013677 0.62133 1.3708 -0.47849 1.2003 -0.53632 -0.034223 -0.0027707 -0.035312 0.00097064 -0.042517 0.99488 0.0067004 1.5127 1.3846 0.75356 1.1689 -0.75892 -0.25152 0.00597 0.24684 0.19725 0.0044411 -0.00055444 0.90815 1.2123 0.45207 0.0036076 1.5547 0.080572 -0.65134 0.00055459 0.024127 0.37594 0.53432 -0.62941 -0.69691 1.8982 0.47787 0.89554 -0.85445 0.0080567 -0.082934 -0.66365 -0.85273 0.43817 0.0012481 Amplification Peak 19 - CN values 20p11.21 chr20:25355954-25483163(probes 1433396:1433410) chr20:25447476-25481665(probes 1433397:1433409) chr20:19046760-40360025(probes 1429091:1439416) 3.951e-17 0.010424 Actual Copy Change Given 0.71476 0.82001 -0.00056965 0.80772 1.2574 -0.006505 -0.081696 2.3974 0.71152 -0.00069303 0.26702 2.0519 0.017963 0.80442 0.068808 1.5749 0.84337 0.72112 0.52223 0.87428 -0.0037024 0.043582 0.31145 0.85833 -0.011611 1.5394 1.8407 0.47392 0.82862 0.0034687 2.4719 1.0241 0.0041632 -0.66485 0.00083195 0.0072217 -0.83801 2.2035 0.66567 1.1905 1.5421 0.0015255 1.4502 0.32834 0.27871 -0.094988 -0.25201 1.4166 0.010564 0.096525 0.0048579 -0.0060904 0.46724 -0.0011087 0 0.90875 -0.057385 1.8696 1.062 0.41446 -0.026988 1.9914 0.017544 1.9359 -0.013677 0.67783 -0.016979 0.35162 0.65387 -0.005261 2.5754 -0.010975 -0.80252 0.047694 2.4536 -0.0059522 -0.015191 0.0034687 -0.046718 -0.014228 0.53432 0.64543 -0.79945 0.8221 0.70795 -0.72922 3.1619 0.001803 0.77714 -0.094397 0.97791 0.58377 -0.4874 -0.0044312 0 0.75261 0.93976 0.0090312 -0.42484 1.2644 -0.01409 0.6642 0.52551 -0.0059522 0.024829 0.73303 2.3276 0.0077783 0.88291 0.71622 0.0029133 0.73049 0.0040243 -0.54361 0.28074 0.69372 1.6138 0.77743 1.8721 0.88546 0.77949 1.8496 0.0053312 1.5504 0.0079175 0.069525 0.52083 0.038065 -0.019726 0.71697 0.89624 -0.034768 0.0024969 -0.0037395 0.36477 -0.48592 1.1172 0.81926 0.54541 3.6569 0.11697 0.032986 0.52118 -0.0017429 -0.00013862 -0.59549 1.36 1.2401 -0.039529 0.0024969 1.01 -0.59283 0.5118 0.033165 0.74803 0.21776 -0.0017632 0.064387 0.50811 0.96681 0.012934 0.01447 0.019083 0.035165 1.6349 1.0684 0.34517 1.6341 1.664 0.11052 1.9983 1.9877 1.6976 0.0073421 0.91764 1.1848 0.6992 0.60124 0.75127 0.059937 1.9188 -0.011473 -0.6295 0.0081413 -0.45155 0.0028955 0.85838 1.1367 0.12029 -0.032587 -0.72013 -0.016841 0.10351 0.74956 1.3978 -0.005814 3.6569 1.8636 0.31257 -0.71857 1.7503 0.90392 -0.57002 -0.0044312 0.034113 -0.00073463 -0.030404 0.92411 0.0013868 0.4844 -0.78866 -0.00033671 0 0.80344 0.53465 1.1401 0.60127 1.6363 0.79809 0.0054139 1.1905 0.80344 0.0014323 2.5659 0.51978 0.57273 -0.018765 -0.005814 0.35904 0.2032 0.82686 0.7372 0.28255 -0.0070576 0.71528 0.0024969 0.67419 0.010006 0.014609 1.9182 -0.0080684 1.1325 2.2047 -0.39363 0.37084 -0.00055444 0.010842 1.2971 0.80459 0.13865 0.75505 -0.28893 -0.005261 -0.0060904 0.30873 0.063454 0.030873 0.29899 0.78485 0.0066653 0.26954 1.0708 0.015447 0.8069 -0.006505 0.43986 0 2.4531 -0.22539 0.020623 0.67289 1.6627 0.51786 0.27222 1.4259 0.0086298 0.98535 1.7173 0.80967 0.00458 0.072971 1.5509 0.22808 -0.40241 0.46092 0.0030522 0.0057066 0.77607 -0.0018014 1.072 1.2188 -0.00069303 0.0038854 0.034818 0.076998 0.00027728 -0.0015599 0.44953 -0.022195 0.96637 -0.0016629 2.0264 0.040185 1.6331 0.86918 0.65369 0.49649 0.0051359 1.6366 -0.0029091 1.065 0.12113 1.3272 0.99987 0.98618 -0.0023656 0.7982 1.2659 0.75269 1.3515 0.010842 -0.3592 1.992 1.5439 0.25402 0.23876 0.0022193 -0.032587 -0.3217 1.386 0.29345 0.8122 0.039195 0.84356 0.31835 0.4326 -0.18005 2.7456 0.27995 -0.005261 0.63956 0.89417 1.3353 0.29192 0.021884 0.015028 0.0069435 -0.042788 0.47255 -0.0012473 0.016286 1.5692 0.34518 1.2975 -0.59731 -0.039529 1.2625 0.00041593 0.24793 0.15293 0.00055459 -0.0053992 -0.23875 0.56596 1.2736 0.68009 -0.58882 0.70139 -0.78883 -0.57625 -0.40661 0.93589 0.057226 0.76274 -0.038034 0.93307 0.0070826 0.0043021 1.2612 0.32663 0.53389 0.0084743 0.0019418 1.9485 1.2607 0.068235 0.60377 -0.018216 0.43665 0.75223 1.2259 -0.0019399 0.00097064 0.40544 0.23938 0.037531 3.6569 0.00427 -0.27224 -0.29343 2.5429 0.45156 -0.58823 0.4463 -0.013677 0.62133 1.3708 1.704 1.2003 0.51577 -0.034223 -0.0027707 1.8844 0.00097064 2.0928 0.99488 0.0067004 1.5127 1.3846 0.75356 1.1689 -0.75892 -0.25152 0.00597 0.22854 0.19725 0.0044411 -0.00055444 0.90815 1.2123 0.45207 0.0036076 1.5093 0.080572 -0.65134 0.00055459 -0.00055444 1.7197 0.53432 2.097 -0.69691 0.83726 0.47787 0.84126 1.4994 -0.0033243 0.81435 -0.66365 -0.85273 0.43817 0.0012481 Amplification Peak 20 - CN values 20q11.21 chr20:26197900-30582729(probes 1433673:1434008) chr20:30165128-30229254(probes 1433827:1433843) chr20:19046760-40360025(probes 1429091:1439416) 1.1561e-39 5.0703e-24 Actual Copy Change Given 0.71476 0.82001 -0.00056965 0.80772 1.2574 -0.006505 1.008 2.3974 1.5181 -0.00069303 0.26702 2.8326 0.017963 0.80442 0.068808 1.5749 0.84337 0.72112 0.52223 0.87428 -0.0037024 0.68403 0.31145 0.85833 -0.011611 1.5394 1.8407 0.47392 2.5849 0.0034687 2.4719 2.8875 0.0041632 2.2528 0.00083195 0.0072217 1.2445 2.2035 0.66567 1.1905 2.4949 0.0015255 1.4502 1.5303 0.27871 2.3181 1.6869 1.4166 0.010564 1.2293 0.0048579 -0.0060904 1.2644 -0.0011087 0 0.90875 0.39197 1.8696 1.062 0.41446 -0.023566 1.9914 1.4875 1.9359 -0.033814 0.67783 -0.016979 2.9742 0.65387 -0.005261 2.5754 -0.010975 1.9895 0.047694 2.4536 -0.0059522 1.398 0.0034687 1.2668 -0.014228 1.1523 0.64543 1.8198 0.8221 0.70795 2.5168 3.1619 0.001803 0.77714 0.35177 0.97791 0.58377 2.793 -0.0044312 0 0.75261 0.93976 1.0966 2.3457 1.2644 -0.01409 0.20239 0.52551 -0.0059522 0.024829 0.74918 2.3276 0.0077783 0.88291 0.71622 0.96083 0.73049 0.0040243 0.53415 0.28074 1.5975 1.6138 0.77743 1.8721 0.88546 0.78331 1.8496 0.0053312 1.5504 0.0079175 0.069525 0.52083 0.80247 1.8482 0.71697 0.89624 -0.034768 0.0024969 -0.0037395 0.36477 1.5489 1.1172 0.81926 0.54541 1.2268 0.81747 0.032986 0.52118 -0.0017429 -0.00013862 1.5509 1.36 1.2401 1.0757 0.0024969 1.01 1.6078 0.5118 0.033165 0.74803 1.0891 -0.0017632 0.064387 0.50811 0.96681 0.012934 0.01447 0.019083 0.035165 2.0915 1.0684 0.34517 1.6341 3.6569 2.039 1.9983 1.9877 1.6976 0.0073421 0.91764 1.1848 0.6992 0.60124 0.75127 0.059937 1.9188 -0.011473 0.7922 0.0081413 1.2483 0.0028955 0.85838 1.1367 0.12029 2.3857 1.4229 -0.016841 1.1203 0.74956 1.3978 -0.005814 2.5913 1.8636 0.31257 2.4881 1.7503 0.90392 0.63481 -0.0044312 0.034113 -0.00073463 3.3856 0.92411 0.0013868 0.4844 0.9363 -0.00033671 0 0.80344 0.53465 1.1401 2.4226 1.6363 0.79809 0.0054139 1.1905 0.80344 0.0014323 2.5659 0.51978 0.57273 3.1206 -0.005814 0.35904 0.2032 0.82686 0.7372 1.363 -0.0070576 0.59278 0.0024969 2.3073 0.60214 0.014609 1.2346 -0.0080684 1.1325 2.2047 0.66863 0.37084 -0.00055444 0.010842 1.3882 0.80459 0.13865 1.7533 2.0497 -0.005261 -0.0060904 0.30873 0.063454 0.030873 0.29899 0.78485 1.5821 0.26954 1.0363 0.015447 0.8069 -0.006505 0.43986 0 2.4531 1.3489 0.020623 0.67289 3.1655 0.51786 0.27222 1.4259 0.0086298 0.98535 1.676 0.80967 0.00458 0.072971 1.5509 0.22808 0.80967 0.46092 0.0030522 0.0057066 1.5034 -0.0018014 3.4106 1.2188 -0.00069303 0.0038854 0.034818 1.5863 0.00027728 -0.0015599 0.44953 1.3589 0.96637 -0.0016629 2.0264 0.040185 1.6331 0.86918 0.65369 0.49649 0.99634 1.5033 -0.0029091 1.065 0.12113 1.3272 0.99987 0.98618 -0.0023656 0.7982 1.3863 0.75269 1.3515 1.1193 0.34356 1.992 1.5439 0.25402 0.6898 0.0022193 -0.032587 1.6359 1.386 0.29345 2.1079 0.039195 0.84356 0.31835 0.4326 1.2174 2.7456 0.27995 -0.005261 1.2666 2.1798 1.4198 0.29192 0.87149 0.68589 1.3622 1.1394 0.47255 -0.0012473 0.016286 1.5692 0.34518 1.2975 1.5953 1.2992 1.2625 0.00041593 0.24793 0.78369 0.00055459 -0.0053992 1.2748 0.56596 1.2736 0.68009 1.1468 0.70139 0.8349 0.91036 0.37282 0.93589 0.057226 0.76274 1.1699 0.95798 0.0070826 0.0043021 1.2612 0.32663 0.53389 0.7072 0.0019418 1.9485 1.2607 0.068235 0.60377 -0.018216 0.43665 1.3947 1.2259 -0.0019399 0.51124 0.40544 0.23938 0.037531 0.49766 0.00427 0.353 0.51444 2.5429 1.762 1.416 0.4294 -0.013677 0.62133 1.3708 1.704 1.2003 0.51577 -0.034223 -0.0027707 1.8844 0.00097064 2.0928 2.4577 0.0067004 1.5127 1.3846 0.75356 1.1689 1.8026 0.6805 0.00597 0.22854 0.19725 0.0044411 -0.00055444 1.5394 1.5652 0.45207 0.0036076 1.5093 0.080572 0.7743 0.00055459 -0.00055444 1.7197 1.0174 2.667 1.6952 0.83726 0.47787 0.84126 1.4994 -0.0033243 0.81435 1.0429 0.80519 2.3172 0.0012481 Amplification Peak 21 - CN values 20q12 chr20:37145354-40360023(probes 1437349:1439414) chr20:40214882-40356900(probes 1439321:1439395) chr20:19046760-40360025(probes 1429091:1439416) 1.2657e-35 4.3064e-12 Actual Copy Change Given 0.71476 0.82001 -0.00056965 0.80772 1.2574 -0.006505 0.47009 2.3974 1.5181 -0.00069303 0.26702 2.0287 0.017963 0.80442 0.068808 1.5749 0.84337 0.72112 0.52223 0.87428 -0.0037024 0.68403 0.31145 0.85833 -0.011611 1.5394 2.0074 0.47392 2.5849 0.0034687 2.4719 1.6366 0.0041632 2.2425 0.00083195 0.0072217 1.2877 2.2035 0.66567 1.2113 2.4949 0.0015255 1.4641 1.5303 0.27871 2.3181 1.7143 1.4138 0.010564 1.2966 0.0048579 -0.0060904 1.3203 -0.0011087 0 0.90875 2.0119 1.8696 1.062 0.41446 -0.023566 1.9914 1.4875 1.9496 -0.033814 0.67783 -0.016979 2.2247 0.65387 -0.005261 2.6194 -0.010975 1.9895 0.047694 2.4262 -0.0059522 1.3844 -0.022332 1.2668 -0.014228 0.52319 0.64543 1.7982 0.8221 0.70795 2.5168 3.0558 0.001803 0.77714 0.35177 0.97191 0.58377 2.7879 -0.0044312 0 0.75261 0.93976 1.0966 1.2284 1.2644 -0.01409 0.18223 0.52582 -0.0059522 -0.82162 1.2405 2.3276 0.0077783 1.073 0.69297 1.3408 1.7388 0.0040243 -0.55296 0.28074 1.5181 1.6138 0.77743 1.8721 0.88546 0.78331 2.4217 0.0053312 1.5191 0.0079175 0.069525 0.69204 0.8048 1.8482 0.71697 1.414 -0.034768 0.0024969 -0.0037395 0.36477 1.5489 1.1172 0.81926 0.5267 3.6569 0.81747 0.061222 0.52118 -0.0017429 -0.00013862 1.5509 1.3039 1.2703 1.1716 0.0024969 1.01 1.514 2.5062 0.033165 0.74803 1.0891 -0.0017632 0.064387 0.50811 0.96681 0.012934 0.01447 0.019083 0.035165 3.5593 1.0684 0.34517 1.6341 1.6444 1.9658 1.9994 1.9877 1.655 0.0073421 0.91764 1.1848 0.71302 0.60124 0.72565 0.060936 1.5866 -0.011473 0.7922 0.0081413 1.2483 0.0028955 0.85838 1.1215 0.12029 2.3857 1.4229 -0.016841 1.1203 2.3763 1.3978 -0.005814 2.4177 1.8636 -0.40407 2.48 1.7503 0.90392 0.65627 -0.0044312 0.034113 -0.00073463 0.90351 1.6972 0.0013868 0.4844 0.91299 0.0082754 0 0.80344 0.53465 1.1401 2.4226 1.6079 0.78074 0.0054139 1.1905 0.80344 0.0014323 2.5659 0.51978 0.57273 2.0542 -0.005814 0.35904 0.19223 0.82686 0.7372 1.3082 -0.0070576 0.51263 0.0024969 1.561 0.63737 0.014609 1.0891 -0.0018014 1.1325 2.0982 0.66863 0.80753 -0.00055444 0.010842 1.3882 0.80459 0.13865 1.7533 2.0497 -0.005261 -0.0060904 0.30873 1.7622 0.030873 0.279 1.5741 1.3417 0.26954 1.0363 0.015447 0.82787 -0.006505 0.42503 0 2.3627 1.2743 0.020623 0.67289 1.7053 0.51786 0.27222 1.4259 0.0086298 0.94509 1.676 0.80967 0.00458 0.072971 1.5509 0.22808 0.81727 0.46092 0.0030522 0.0057066 1.3805 -0.0018014 2.2534 1.2188 -0.00069303 0.0038854 0.034818 1.5863 0.00027728 -0.0015599 0.44953 1.3589 0.96637 -0.0016629 2.0264 0.040185 1.6331 0.91105 0.65369 0.49649 0.99634 1.5436 -0.0029091 1.065 0.12113 1.332 0.99987 0.98618 -0.0023656 0.76753 1.3327 0.75269 1.3515 1.1082 0.34356 1.9486 1.5341 0.25402 0.70513 0.0022193 -0.032587 1.6818 1.386 0.29345 2.0643 0.039195 0.84356 0.31835 0.42049 1.2174 2.7456 0.27995 -0.005261 0.63153 1.4804 1.3697 0.29192 0.87149 0.68589 1.3622 1.1394 0.68105 -0.0012473 0.016286 1.5692 0.34518 1.1887 1.5953 1.2992 1.2277 0.00041593 0.24793 0.56525 0.00055459 -0.0053992 0.89066 0.56596 1.2736 0.66808 1.6984 0.76293 0.8349 0.88546 0.42873 0.93081 0.057226 0.76274 1.1699 0.92664 0.0070826 0.0043021 1.2612 0.92641 0.53389 0.7072 0.0019418 1.8842 1.2607 0.068235 0.60377 -0.018216 0.43665 1.3947 1.2259 -0.0019399 0.51124 0.40544 0.23938 0.037531 0.49766 0.50151 0.353 0.40361 2.3585 1.0738 1.416 0.4294 -0.013677 0.62133 1.3708 1.6657 1.2003 0.51577 0.49199 -0.0027707 2.6965 0.00097064 2.0928 1.4395 0.0067004 2.2534 1.3846 0.75356 1.0844 1.6402 0.6805 0.00597 0.23411 0.19725 0.0044411 -0.00055444 1.2736 1.5652 0.45207 0.0036076 1.5093 0.080572 0.7534 0.00055459 -0.00055444 1.7197 1.0174 2.667 1.6798 1.7643 0.44135 0.84126 0.80928 -0.0033243 1.6566 1.0767 0.80519 0.84514 0.0012481 Amplification Peak 22 - CN values 20q13.12 chr20:42493784-43357898(probes 1440939:1441506) chr20:42732001-42772249(probes 1441148:1441180) chr20:40360028-63025520(probes 1439419:1453977) 1.1593e-13 3.7541e-08 Actual Copy Change Given 0.71476 0.82001 -0.00056965 0.80772 1.2338 -0.006505 0.4844 2.3531 1.5791 -0.00069303 0.26702 3.4816 0.017963 0.80442 0.068808 1.5749 0.84337 0.72112 0.52223 0.87428 -0.0037024 0.68403 0.31145 0.85833 -0.011611 1.5394 1.9032 0.47392 2.5849 0.0034687 2.4719 2.84 0.0041632 2.2403 0.00083195 0.0072217 1.2877 2.4454 0.66567 1.2113 2.5643 0.0015255 1.4641 1.6063 0.27871 2.3181 1.7492 1.4138 0.010564 1.2966 0.0048579 -0.0060904 1.3203 -0.0011087 0 0.90875 2.0119 1.8696 0.99625 0.41446 -0.023566 2.7387 2.1433 1.9864 -0.033814 0.67783 -0.016979 2.2397 0.65387 -0.005261 2.6803 -0.010975 2.0795 0.047694 2.5346 -0.0059522 1.3844 -0.022332 1.2994 -0.014228 0.52319 0.64543 1.8453 0.81019 0.70795 2.5161 3.1253 0.001803 0.77714 0.35177 0.97191 0.58377 2.8227 -0.0044312 0 0.72525 0.93976 1.0966 1.2646 1.2644 -0.01409 1.4674 0.52582 -0.0059522 0.66364 1.3147 2.3478 0.0077783 1.073 0.69297 1.3408 3.6569 -0.0087566 -0.55296 0.28074 1.5786 1.608 0.77743 1.8721 0.88546 0.78331 2.952 0.0053312 1.5448 0.0079175 0.069525 0.69204 2.0826 1.8482 0.71697 1.4672 -0.034768 0.0024969 -0.0037395 0.36477 1.5489 1.1172 0.81926 0.5267 3.6569 0.81747 -0.013953 0.52118 -0.0093305 -0.00013862 1.5509 1.3039 1.2703 1.149 0.0024969 1.01 1.5335 3.3871 0.033165 0.74803 1.0891 -0.0017632 0.064387 0.50811 0.96681 0.012934 0.01447 0.019083 0.035165 3.6569 1.0684 0.34517 1.6341 1.6444 1.9658 2.0113 2.0238 1.7123 0.0073421 0.91764 1.0548 0.71302 0.60124 0.72565 0.060936 1.59 -0.011473 0.7922 0.0081413 1.2483 0.0028955 0.85838 1.1215 0.12029 2.4481 1.4229 -0.016841 1.1203 2.3763 1.3978 -0.005814 2.4868 1.8269 2.9225 2.48 1.7503 0.90392 0.65627 -0.0044312 0.034113 -0.00073463 0.90351 1.721 0.0013868 0.4844 0.91299 0.0082754 0 0.80344 0.53465 1.1401 2.4226 1.6079 0.78074 0.0054139 1.1905 0.80344 0.0014323 2.5567 0.51978 0.57273 2.0542 -0.005814 0.35904 0.19223 0.82686 0.7372 1.3317 -0.0070576 1.2344 0.0024969 3.3912 0.63737 0.014609 1.0891 -0.0018014 1.1325 2.1777 0.66863 0.80753 -0.00055444 0.010842 1.3882 0.80459 -0.25164 1.7533 2.0097 -0.005261 -0.0060904 0.30873 3.6569 0.030873 0.279 1.5741 1.3417 0.26954 1.0363 0.015447 0.82787 -0.006505 0.42503 0 2.4874 2.4441 0.82412 0.67289 1.7053 0.51786 0.27222 1.4259 0.019643 1.32 1.6924 0.80967 0.00458 0.072971 1.5509 0.22808 0.81727 0.46092 0.0030522 0.0057066 1.4619 -0.0018014 2.2942 1.2188 -0.00069303 0.0038854 0.034818 1.8209 0.00027728 -0.0015599 0.44953 1.3589 0.96637 -0.0016629 1.932 0.040185 1.6551 0.91105 0.65369 0.49649 0.99634 1.5436 -0.0029091 1.065 0.12113 1.332 0.99987 0.98618 -0.0023656 0.76753 1.3828 0.75269 1.3515 1.1082 0.34356 1.9486 1.5649 0.21822 0.70513 0.0022193 -0.032587 1.6818 1.386 0.29345 2.0984 0.039195 0.84356 0.31835 0.42049 1.2174 3.1637 0.27995 -0.005261 0.63153 1.4804 1.4155 0.29192 0.87149 0.71999 1.3622 1.1394 0.68105 -0.0012473 0.016286 1.5692 0.34518 1.1887 1.5953 1.3327 1.2277 0.00041593 0.24793 0.56525 0.00055459 -0.0053992 0.89066 0.56596 1.2736 0.66808 1.4615 0.76293 0.8349 0.93712 1.7748 0.93081 0.057226 0.76274 1.1699 0.92664 0.0070826 0.0043021 1.2612 0.92641 0.53389 2.3448 0.0019418 1.9592 1.2607 0.068235 0.60377 -0.018216 0.43665 1.3947 1.2259 -0.0019399 0.51124 0.40544 0.23938 0.037531 0.4558 0.50151 0.353 0.40361 2.5492 1.0738 1.416 0.4294 -0.013677 0.62133 1.3513 1.7002 1.2003 0.51577 1.4846 -0.0027707 3.6569 0.00097064 2.0928 1.4395 0.0067004 2.7676 1.3846 0.75356 1.1349 1.7061 0.6805 0.00597 0.23411 0.19725 0.0044411 -0.00055444 2.8943 1.6005 0.45207 0.0036076 1.5093 0.080572 0.7534 0.00055459 -0.00055444 1.7213 1.0174 2.6737 1.6798 1.7643 0.44135 0.84126 1.563 -0.0033243 1.6639 1.0767 0.80519 0.84514 0.0012481 Deletion Peak 1 - CN values 1p36.11 chr1:26527443-27650365(probes 12465:12848) chr1:27089269-27150821(probes 12676:12687) chr1:1-37000884(probes 1:17551) 4.7302e-24 5.5492e-20 Actual Copy Change Given -0.034976 -0.81435 -0.0043081 -0.49277 -0.80591 0.0058309 0.017264 -0.073545 0.18859 0.015168 -0.21997 -0.013402 0.0016803 -0.78207 0.004719 -0.27117 -0.41586 -0.076545 -0.48796 -0.41069 -0.0051227 0.001803 -0.018353 0.023274 -0.027535 -0.20124 -0.46358 -0.39964 0.0065262 0.00027728 -0.076615 -0.45287 0.0034687 -0.81991 -0.012024 0.0029702 -0.83954 -0.50474 -0.04211 -0.15988 -0.70917 0.00083195 0.012376 -0.43214 -0.027784 0 -0.26191 0.010643 0.0058309 -0.21934 0.0114 -0.0080822 -0.075612 -0.005131 -7.5957e-05 0.048522 -0.5427 0.0055529 -0.53199 -0.07921 -0.018353 -0.044903 -0.0036011 -0.0062286 -0.044009 -0.043873 -0.039665 0.095884 -0.00055444 0 -0.8211 -0.023207 -0.37538 0.062794 -0.4861 -0.41904 0.0062481 -0.016017 -0.70406 -0.022852 -0.0055375 -0.76475 -0.85051 -0.0029543 -0.017665 -0.011749 0.014259 -0.028081 -0.7353 0.002147 0.060369 -0.49666 -0.46756 0.0038854 -0.0014465 -0.78032 0 0.024829 0.055658 -0.10815 -0.033132 -0.0037395 0.033653 -0.014228 -0.011887 -0.36431 -0.76323 0.00041593 -0.17887 -0.012576 -0.59039 0 -0.015191 0.0018549 -0.0029091 -0.26492 -0.36771 -0.73683 0.0083049 -0.47409 0.024689 -0.27552 0.0013042 -0.4867 0.0037465 -0.00203 -0.24832 -0.010948 0 -0.030131 -0.68971 -0.044959 -0.024524 -0.0088526 -0.38376 -0.46457 -0.21763 -0.019014 -0.026988 -0.078029 -0.53642 -0.02151 -0.53747 0.0014453 0.078699 -0.321 -0.15764 -0.97029 -0.75078 -0.0024938 -0.52102 -0.15515 -0.01103 -0.6163 -0.20099 -0.026167 -0.0050216 -0.46556 -0.29189 0.0051519 0.0098669 0.0068044 0.018103 -0.70213 0.0097276 0.00097064 -0.20526 -0.51516 0.011539 -0.34721 -0.89368 0.015829 -0.53703 0.0090125 0.025812 0.010564 0.013775 0.0016642 -0.36226 -0.011198 -0.052231 -0.0069195 0.020343 0.0058309 -0.40307 0.0065262 -0.00436 0.016908 0 -0.094196 -0.56388 0.0024969 0.013632 0.027076 -0.097232 -0.0031859 -0.57506 -0.46935 0.16265 -0.68979 -0.026167 0.0026357 -0.59474 0 0.013765 0.0012481 -0.034089 -0.2965 0.0051359 -0.45811 0.0090312 -0.0079455 -0.010232 -0.037762 -0.33699 -0.93304 -0.56716 -0.80902 -0.026928 -0.010232 -0.33997 0.012934 0.00038964 -0.36839 0.0040243 0.008892 -0.00041585 0.0021453 -0.42506 -0.0077482 -0.10597 -0.22268 0.0028363 -0.0026322 -0.26312 0.0054139 -0.13432 -0.74499 0.022585 -0.36306 0.0041632 -0.18458 -0.016429 0.071535 -0.020549 0.031859 0.0086874 -0.053611 -0.38627 -0.028885 -0.01354 -0.0099565 0 -0.0059072 0.065513 -0.86345 0.0078033 -0.3575 0.026935 -0.75513 -0.54149 0.0030522 0 0.026957 0.0044411 -0.3178 0.0024969 -0.22193 -0.21082 0.014609 -0.35236 0.052525 -0.58656 -0.20149 -0.34847 -0.0011087 -0.43409 -0.89706 -0.32193 -0.017492 0 -0.50975 0.0083583 -0.033132 -0.0020784 0.011261 -0.028901 0.26223 0.006109 -0.45768 -0.22416 -0.00069303 0.02539 -0.0083005 -0.47226 0.0016642 0.0014899 -0.0088476 -0.016979 -0.47607 -0.0045695 -0.17778 0.054233 -0.40748 -0.098931 -0.35213 -0.0026322 -0.51835 -0.026714 0.010424 -0.13126 0.094826 -0.10132 0 0 -0.0013961 -0.33641 -0.11803 0.034818 -0.037354 -0.01846 0.0066653 -0.15132 -0.73411 -0.007472 -0.79312 -0.00058129 -0.041626 -0.11652 -0.036401 -0.075654 -0.19633 -0.70693 -0.95406 0.022444 -0.020001 -0.81367 0 -0.2939 -0.0019399 -0.30004 -0.0099126 -0.65155 -0.37092 -0.458 -0.73967 -0.016979 0.051103 0.023066 0.0058309 -0.54007 0.11624 0 -0.072307 -0.58461 -0.21441 0 0.0027745 0.0282 -0.19637 0.0016642 -0.0042929 -0.15733 0.021043 -0.041431 -0.0020784 0.019363 0.10716 -0.73556 -0.75469 0.00083195 0.032563 0.048972 0 -0.78378 0.088273 0.0011093 0.0087528 -0.73134 -0.2479 0.0067369 -0.78252 -0.0033243 0.013353 -0.053881 0.0022193 -0.65947 -0.005261 -0.47395 -0.027398 -0.3773 -0.62389 -0.0040162 0.0043021 0.013772 -0.068366 -0.32243 -0.0013858 -0.65873 0.053237 0.016985 -0.32588 -0.037815 -0.45168 -0.0081624 0.0094491 0.010424 -0.4065 -0.13995 -0.52621 -0.018765 0.0026357 -0.43861 0.00013863 0.026935 0.0024969 0.0021213 -0.033534 -0.037626 -0.39107 -0.24277 -0.32344 0.033549 0.0033299 0.021603 -0.014978 0.0055529 -0.00027261 -0.15452 -0.41606 -0.013815 0.0022193 -0.40912 -0.47683 0.051354 0.0034687 -0.75167 0.0090312 0 -0.031671 -0.67652 -0.43815 -0.027896 0.058652 0.010146 0.0043021 -0.042517 0.25573 -0.35635 -0.37066 0.072971 Deletion Peak 2 - CN values 1p33 chr1:49615826-50514967(probes 24525:24818) chr1:48998362-50492467(probes 24067:24812) chr1:49197569-50591564(probes 24248:24863) 2.2676e-36 1.0923e-32 Actual Copy Change Given -0.034976 -0.80708 -0.0043081 -0.49277 0.085357 0.0058309 0.017264 -0.073545 0.18859 0.015168 -0.21997 -0.013402 0.0016803 0.032563 0.004719 0.15233 -0.41586 -0.076545 0.010146 -0.37234 -0.0051227 -0.34828 -0.85146 0.023274 -0.027535 -0.20124 -0.46358 -0.15384 0.0065262 0.00027728 -0.063788 -0.45287 0.0034687 -0.81991 -0.012024 0.0029702 -0.00069303 -0.50474 -0.04211 -0.15988 0.013074 0.00083195 0.012376 0.0055529 -0.027784 0 -0.24532 0.010643 0.0058309 -0.21934 0.0114 -0.0080822 -0.075612 -0.005131 -7.5957e-05 0.048522 0.43547 0.0114 -1.1277 -0.07921 -0.018353 0.0058309 -0.0036011 -0.0062286 -0.0018014 -0.0055633 -0.00055444 0.078522 -0.00055444 0 -0.8211 -0.023207 -0.36997 0.062794 0.02745 -0.41904 0.0062481 -0.74011 0.0075 0.00027728 -0.015025 0.050392 0.047978 -0.0029543 -0.017665 -0.011749 0.014259 0.016565 -0.0033243 0.002147 -0.71897 0.30246 0.020384 0.0038854 -0.0014465 0.017404 0 0.024829 0.013772 -0.10815 0.0058309 -0.0037395 0.033653 0.0076392 -0.011887 0.15935 0.059052 0.00041593 -0.17887 -0.012576 -0.038578 0 -0.015191 0.0018549 -0.00097017 -0.26492 -0.36771 0.05231 0.0083049 -0.47409 -0.005261 -0.27552 0.0013042 -0.4867 0.0037465 -0.00041585 -0.24832 -0.010948 0 -0.030131 0.010818 0.0024908 0.015308 -0.0088526 -0.37932 -0.44615 -0.21224 -0.019014 -0.7037 -0.0033669 -0.50125 -0.02151 -0.51096 0.0014453 0.078699 -0.321 7.0885e-05 -0.094671 -0.7306 -0.0024938 -0.52102 -0.15515 -0.013234 0.66887 -0.20099 -0.026167 -0.0050216 -0.51423 -0.28275 0.0051519 0.0098669 0.0068044 0.018103 0.051453 0.021323 0.00097064 -0.20526 -0.51516 -0.0052794 0.1795 -0.89368 0.015829 0.054091 0.0090125 0.025812 0.010564 0.013775 0.0016642 -0.36226 0.0030522 -0.052231 -0.0069195 0.020343 -0.012121 -0.40307 0.0065262 -0.00436 0.016908 0 -0.094196 -0.56388 0.0024969 0.013632 0.027076 -0.097232 -0.0031859 0.0063871 -0.46935 0.16265 -0.68979 -0.026167 0.0026357 -0.57101 0 0.013765 0.0012481 -0.0020784 -0.2965 0.0051359 -0.45811 0.0090312 -0.0079455 -0.010232 -0.037762 -0.33699 0.11638 -0.56716 0.0036831 -0.026928 -0.7559 -0.33997 0.0024969 0.00038964 0.030591 0.0040243 0.008892 -0.00041585 0.0021453 -0.21861 -0.0077482 -0.10597 -0.22268 0.0084434 -0.0026322 -0.26846 0.0054139 -0.13432 0.017264 0.022585 -0.36306 0.0041632 -0.67104 -0.016429 -0.071873 -0.020549 0.021132 0.0086874 -0.053611 -0.38627 -0.028885 -0.01354 -0.0099565 0 -0.0059072 0.065513 -0.12694 -0.0029113 -0.3575 0.026935 0.78871 1.0709 -0.31176 0 0.026957 0.0044411 -0.55035 0.0024969 -0.22193 -0.21082 0.014609 -0.35654 0.052525 -0.54472 -0.20149 -0.34847 -0.0011087 -0.074678 0.00077338 -0.32193 -0.017492 0 0.83569 0.0083583 -0.033132 -0.0020784 0.011261 -0.028901 0.25941 0.006109 0.0097276 -0.22416 -0.00069303 0.02539 0.00097064 -0.47226 0.0016642 0.0014899 -0.0088476 -0.016979 0.023426 -0.0045695 -0.17778 0.054233 -0.37954 -0.098931 -0.35213 -0.01904 0.027076 -0.026714 0 -0.19815 0.094826 -0.10132 0 0 0.0020702 -0.3764 -0.11803 0.034818 -0.037354 -0.01846 0.0066653 -0.15132 -0.24672 -0.007472 0.0093098 -0.00058129 -0.041626 -0.11652 -0.27296 -0.075654 -0.19675 0.015727 0.013213 0.022444 -0.020001 -0.81367 0 0.017684 -0.0019399 0.38072 -0.0099126 -0.65155 0.015107 -0.99256 -0.73573 -0.016979 -0.0012473 0.11067 0.0058309 0.00597 0.11624 0 0.36506 0.015022 -0.19082 0 0.0027745 0.0282 -0.19637 0.0016642 0 -0.16841 0.012237 -0.041431 -0.0036011 -0.58951 0.089706 -0.73556 -0.75469 0.00083195 -0.0013858 0.048972 0 -0.040345 0.088273 0.0036076 0.0087528 -0.00027724 -0.0041764 -0.55141 -0.7826 -0.0033243 0.013353 -0.64038 0.0022193 -0.011611 -0.005261 0.41028 -0.027398 -0.35442 0.0029133 -0.0040162 0.0043021 0.013772 -0.068366 -0.32243 -0.0013858 0.018243 0.053237 0.050961 0.050108 -0.037815 -0.45168 -0.0081624 0.0094491 0.010424 -0.4065 -0.18735 -0.52621 -0.018765 0.0026357 -0.43861 0.00013863 0.0013199 0.0024969 0.0021213 -0.020362 -0.037626 -0.39107 -0.24277 -0.32344 0.033549 0.0033299 0.021603 -0.014978 0.0055529 -0.00027261 -0.15452 -0.41606 -0.013815 0.0022193 -0.40912 -0.47683 0.051354 0.0034687 -0.75167 -0.0018346 0 -0.031671 -0.67652 -0.43815 -0.027896 0.072253 0.010146 0.0043021 -0.069734 0.26467 -0.35635 -0.37066 0.072971 Deletion Peak 3 - CN values 1p13.1 chr1:55527989-149898950(probes 27409:67528) chr1:116182955-116245149(probes 64826:64876) chr1:55274811-118633238(probes 27203:66405) 0.00038973 0.11059 Actual Copy Change Given -0.034976 -0.83857 -0.0043081 -0.51671 -0.80699 0.0058309 0.017264 -0.053141 -0.601 0.0081959 -0.21997 -0.013402 0.0041632 0.032563 0.004719 -0.0026322 -0.41586 -0.076545 0.0070086 -0.37187 0.0044411 -0.36153 -0.0044076 0.070636 0.0052749 -0.20124 -0.38675 -0.23199 0.0065262 0.00027728 -0.037626 -0.48481 0.00041593 -0.81991 -0.012024 0.0029702 -0.00069303 0.0097276 -0.04211 -0.16663 0.013074 0.00083195 0 -0.0040963 -0.027784 -0.036108 -0.24241 -0.013711 0.0077783 -0.15411 0.0090312 -0.0080822 -0.075612 0.0025302 -7.5957e-05 0.031731 -0.4985 0.020483 -0.4973 -0.07921 0.00055459 -0.0033243 -0.0036011 -0.0062286 -0.0018014 -0.0055633 -0.00055444 0.078522 -0.00055444 0 -0.80101 0.00029907 -0.37492 0.040044 -0.0036211 -0.41904 0.0062481 -0.0049844 0.0075 0.00027728 -0.0019399 0.050392 0.0033299 -0.0029543 -0.017665 0.09333 -0.010765 0.0080567 0.0040243 0.002147 -0.73055 0.2807 0 0.0038854 -0.0014465 0.066372 0 -0.016859 -0.8997 -0.10697 0.0058309 -0.006505 0.021437 0.0076392 -0.0019399 0.12461 0.036861 0.00097064 -0.13544 -0.012576 -0.038578 0.026597 -0.0013858 0.010986 -0.00097017 -0.26492 -0.36771 0.052118 0.0083049 -0.47236 -0.0066063 0.06537 -0.0016643 -0.4867 0.0037465 0.0093098 -0.1409 -0.0036011 0 -0.0015243 0.010818 0.017388 -0.0049844 0.0051359 -0.36249 0.063288 -0.18546 0 0.0040243 0.00053643 -0.50991 0.0027745 0.49822 0.0014453 0.078699 -0.321 7.0885e-05 -0.094533 -0.69911 0.0076392 -0.53368 -0.5795 -0.029691 0.0085125 -0.25007 0.0052749 0.0090696 -0.51423 -0.29011 0.027654 0.051662 0.0068044 0.0093098 -0.67256 0.013213 0.022843 -0.20526 -0.51516 -0.0052794 0.089821 -0.95804 0.011972 0.018624 0.014171 0.025812 0 0.0008795 0.0016642 -0.35635 0.0030522 0 -0.92986 0.020343 0.0073609 0.028341 0.0065262 -0.00436 0.0096515 0 0.0871 -0.56388 0.0024969 0.013632 0.027076 -0.01849 -0.0031859 0.0018693 -0.42491 0.16265 -0.68979 0.045849 0.0026357 -0.56988 0.0036076 -1.0054 -0.0033243 -0.010009 -0.2965 0.0051359 -0.47311 0.0090312 -0.0079455 -0.0023553 -0.037762 -0.38123 0.034395 -0.54403 0.0036831 -0.026928 0.0033299 -0.27104 0.0024969 0.00038964 -0.38425 -0.00045021 0 0.3938 0.0022193 -0.10197 -0.013587 0.17392 -0.2435 0.0084434 0.00013863 -0.26846 0.0054139 -0.13432 0.030664 -0.3559 -0.36306 0.0041632 -0.076864 0.00027728 0.031577 -0.029721 0.0051548 0.0073609 0 -0.38627 0.0055529 -0.0065389 0.00013863 0 -0.00055444 0.065513 0.043527 -0.69487 -0.25176 0.026935 0.75528 -0.4959 0.0066653 0 0.020224 0.0044411 -0.30897 0.0024969 -0.22193 -0.21082 0.014609 -0.35567 0.0025783 -0.5403 -0.25148 -0.34847 -0.0011087 0 0.00077338 -0.32193 0.00041593 0 -0.068716 0.0083583 -0.033132 -0.0020784 0.0051802 0.0072217 0.25831 0.006109 -0.0078863 -0.22416 -0.00069303 0.0069435 0.00097064 -0.47226 0.0016642 0.0014899 0.0050019 -0.016979 0.0077783 -0.0045695 -0.15797 0.016146 -0.38066 -0.098931 -0.35213 0.50776 0 -0.026714 0 0.48698 0.094826 0.34925 0 0 0 -0.3764 -0.11803 0.0065262 -0.037354 -0.0042929 0.0066653 -0.15132 -0.24672 0 0.0093098 0.0040243 0.0095862 -0.11652 0.060508 -0.075654 -0.18848 0.015727 0.004719 0.0091705 -0.021098 -0.83308 0 0.012516 -0.0019399 -0.28691 0.0071513 -0.65576 -0.0039383 -0.45206 0.036935 -0.016979 -0.010646 0.11067 0.0058309 0.00597 0.11624 0 0.36506 0.12138 -0.19036 0 0.0027745 -0.0069195 -0.19637 0.0016642 -0.0023553 -0.20784 0.0020479 0.0066653 0.0027745 0.0090312 0.0082991 -0.73556 -0.75469 0.00083195 -0.0013858 0.020203 -0.068127 0.0095883 -0.89748 0.0036076 -0.00069303 0.00097064 -0.10346 -0.55141 -0.7826 -0.0070576 -5.1799e-05 -0.016154 0.0022193 0.009249 -0.005261 0.41028 0.54524 -0.82936 0.14019 -0.0040162 -0.0037395 0.0020805 0.0030623 -0.10713 -0.0013858 0.018243 -0.52971 -0.061823 -0.087894 0.0030522 -0.45168 0.0089151 0.0094491 0.010424 -0.44257 -0.18735 -0.52358 -0.018765 0.0011897 -0.43861 0.00013863 0.0013199 0.0024969 0.0091394 0.0048579 0.0015255 -0.0084385 -0.24277 -0.32971 0.033549 0.0033299 -0.89112 -0.014978 0.0034687 0.0034687 -0.15452 -0.466 -0.013815 0.0022193 -0.40912 -0.47683 0.0083662 0.0034687 -0.74203 -0.0018346 0 0.006109 -0.10652 -0.43091 -0.019943 0.072253 0.010146 0.0043021 -0.068529 0.26467 -0.38419 -0.3551 0.072971 Deletion Peak 4 - CN values 2p21 chr2:40835958-45880121(probes 152297:155403) chr2:43447767-43457271(probes 153920:153921) chr2:43408218-43468744(probes 153895:153928) 0.15521 0.15543 Actual Copy Change Given 0.30058 -0.00028959 0.00036559 -0.57467 0.043023 0.0016642 0.046559 0.36419 0.23117 -0.0015243 -0.007256 0.018934 0.00055459 0.062937 -0.72526 -0.0068856 0.016013 -0.050815 -0.0095426 -0.0071958 -0.0031859 0.0026357 0.32016 0.2151 0.0056187 0.23814 0.1514 0 -0.025346 -0.0023553 0.30213 0.033401 -0.0014212 -0.015879 -0.00027724 -0.010784 0.34636 0.33011 -0.0032145 0.020203 0.081177 -0.00041585 -0.0020784 -0.017254 0.21963 -0.035993 0 0.65273 -0.0008614 0.15786 0.0013868 0.0077783 0.044999 0.00097064 0.0035315 -0.0015243 0.0010509 0.035665 0.0028557 0.039478 -0.0082271 0.016286 0.068378 -1.2929 0.00041593 0.0022193 -0.0016629 -0.24392 0.011539 0.0012481 0.0066653 -0.0054523 0.38459 0.012097 0.4139 0.021603 0.0011947 0 -0.007671 0.00041593 0.0056919 -0.0013858 0.33752 0.14083 0.6653 -0.021195 -0.017323 -0.013127 0.11829 -0.021444 -0.031629 0.010808 -0.0033345 -0.012162 0.00041593 -0.023018 -0.0073339 -0.29792 -0.0027707 0.10322 -0.005261 -0.0088797 0.014572 0 -0.00033706 0.20993 -0.012052 -0.00055444 0.13953 0.0012481 0 0.66652 -0.0059522 0.0040243 0.22746 0.19147 0.023566 0.083991 -0.04983 0 -0.043737 0.070817 0.071162 -0.00027724 -0.0066432 -0.0089906 0.12487 0.36821 0.48639 0.0058309 0.023121 0.0054491 0.010703 0.00013863 -0.015329 0.003474 -0.23973 -0.012677 0.0020805 -0.012318 -0.042245 -0.030642 0.42402 -0.00063452 0.0040243 0 -0.0040838 0.022641 0 -0.0083005 0.020203 0.1996 -0.0038476 0.02473 0.081711 -0.0024129 -0.0016247 0.015885 -0.22304 0.018119 -0.0011087 -0.0059522 0.0080567 -1.2929 -0.011887 -0.0038779 0.15382 0.010017 0.50585 0.077862 0.010807 0.0013747 -0.094592 -0.0034814 -0.0056757 -0.0081624 0 0.074939 0 -0.0035273 -0.0099565 -0.011335 0.014888 -0.0123 0.0065262 -0.014503 -0.0071958 0.15808 -0.012625 -0.013677 0 -0.026441 0.026373 -0.019589 -0.0098185 -0.0081061 -0.018765 0.047815 -0.01849 0 -0.00027724 0.57737 -0.60864 0.00027728 -0.018628 0.010703 -0.97324 0 -0.0051227 0.31675 -0.0049247 0 -0.013264 0.051666 0 0.0073609 0.018357 -0.019767 0 -0.0036011 -0.0087985 0 -0.0049391 0 0.0043021 0.11991 0.35675 0.001803 0.01708 0.0040243 0.15517 0.15591 0.2408 -0.0029537 0.10614 0.008892 0.55443 0.013701 0.0022193 0.077862 0.00458 0.042226 0.0015255 -0.004034 0.363 0.0033299 -0.0033243 -0.043331 0.0065262 -0.0070576 0.070689 0 -0.52942 0.00083195 0.06494 0.0074465 0 0.24513 -0.005172 -0.0092666 -0.016154 -0.00013862 0.004719 -0.00053283 -0.0047079 0.022865 0.0044411 -0.0095218 0 0.0068044 0.15159 -0.0019399 0.0033608 0 0.087969 0.015168 0.0098669 0.76975 0.28881 -0.00027724 0.4168 0 -0.0067106 -0.016292 0.43361 -0.0040963 0.0063871 -0.024803 -0.0048461 0.39824 0.11286 0 0.0062851 -0.0053008 0.0038854 -0.00055444 0.0064906 -0.0043481 -0.85876 0.0023581 0 0.24202 -0.0095426 0.014899 -0.16174 0.033127 0.38667 0.0054139 -0.02384 0.00013863 0.3913 0 -0.0013858 0.1434 0.48053 0.00082162 0.12226 0.14801 0.014609 0.58417 -0.0078928 -0.0016629 0.08088 0.016644 -0.0040162 0.0043021 0.00013863 -0.0013858 0.050392 0.024127 0 0.017124 9.3538e-05 0.29231 0.011539 -0.0080244 -0.0123 0.64708 0.0024969 -0.0023553 0.034113 -0.0080942 0.015308 -0.30515 -0.0070909 0 0.68217 0.49614 -0.0077482 -0.0027236 0 -0.020961 -0.00055444 -0.0019738 -0.0081624 0.33027 0.051814 0 0.0011093 0.52625 0.00097064 0.0015255 -0.72137 0.00069327 0.0084743 0.00083195 -0.00069303 -0.013337 0 0.0375 -0.084528 -0.00055444 0.0052749 0.93936 0 0.019237 -0.0027707 0.12108 -0.0013858 0.047388 0.12705 0.041458 0.00047715 -0.0044312 -0.028491 -0.001294 0.017264 0.0063871 -0.014503 0.37891 0 -0.5977 -0.00069303 -0.0016629 0 0.028652 0.059332 0 -0.0087146 0.0038565 0.019257 -0.0037395 -0.0042929 0 0 0.0041632 -0.014916 0.41228 -0.053746 -0.00061359 0.49545 0.0030522 0.0080567 0.0016642 0.00069327 -0.019726 0.030591 0.11448 -0.0024938 0.0026357 0.0097276 0.025531 0.0013868 0.0013002 0.0015255 -0.0088526 0.00055459 0 0.0044411 -0.061689 0.12518 0.50077 0.18686 -0.044542 -0.67194 -0.0020784 0 0.042024 0.47547 0.3692 -0.0092148 0.0036076 0.45467 0.84899 -0.0026139 0 -0.046719 0.23562 0.16115 0.0056919 -0.00013862 Deletion Peak 5 - CN values 2q22.1 chr2:122037434-168815541(probes 192142:217210) chr2:140976294-142894275(probes 201264:202535) chr2:142042799-142047443(probes 201900:201901) 0.13394 0.13215 Actual Copy Change Given 0.28992 -0.0091286 -2.6792e-05 0.14935 0.043023 0.0016642 0.046559 0.3251 0.16805 -0.010386 0.043022 0.032563 -0.018683 0.051956 -0.71364 -0.0068856 -0.0044286 -0.011855 -0.0095426 -0.01061 -0.0031859 0.0026357 0.15876 0.2151 0.0056187 -0.72048 0.1511 0 -0.025346 0 0.23736 0.018936 -0.0014915 -0.015879 -0.00027724 -0.0040162 0.33124 0.30394 -0.0032145 0.012376 0.075128 -0.0027707 -0.0084385 -0.017602 0.21963 -0.057881 -0.13745 0.60541 -0.0008614 0.15786 0.0013868 0.0077783 -0.024365 0.00097064 -0.42861 -0.0015243 0.0010509 0.035665 0.00049704 0.039478 -0.012722 0.016286 0.068378 0.6078 0.00041593 0.0022193 0.00597 -0.24392 0.011539 0.0012481 0.0055529 8.5394e-05 0 -0.0087146 0.41056 -0.41135 0.0011947 0 -0.007671 -0.011198 -0.0077482 -0.0013858 0.33752 0.23118 0.64972 -0.0067813 -0.044522 -0.013127 0.033127 -0.021444 -0.031629 0.0046283 -0.0033345 -0.012162 0.00041593 -0.023018 -0.0073339 -0.32459 -0.01106 0.10322 0.010006 -0.016567 -0.00015526 0 0.012237 -0.42374 -0.012052 -0.0072592 0.13953 0.0012481 0 -0.19204 -0.012362 -0.034619 0.22176 0.17293 0.016176 0.083991 -0.1382 -0.00041585 0.71991 0.070817 0.071162 0.0084743 -0.0066432 -0.0089906 -0.61566 0.35888 0.48639 0.010002 0.023121 0.011261 0.010703 0 -0.011335 0.010627 -0.38405 -0.04467 0.0020805 -0.020874 -0.16688 -0.056712 0.42402 -0.00063452 0 -0.0054758 0 0.0073092 0.0015255 -0.0011087 0.015587 0.15856 -0.013831 -0.038405 0.071678 0.0012481 -0.0016247 0.0020993 -0.23055 -0.14454 -0.01354 -0.0011554 0.0080567 -0.036145 -0.0019399 -0.0038779 0.07096 0.010017 -0.026988 0.0483 -0.03698 -0.019974 -0.094592 -0.0034814 -0.04418 -0.033405 0 0.074939 0 0 -0.0099565 -0.019177 -0.023772 -0.0123 -0.014584 -0.014503 -0.0071958 -0.031533 -0.012625 0.0077783 0 -0.057558 -0.03095 -0.019589 0.0027745 -0.0081061 -0.018765 0.047815 -0.01849 0 0.017544 0.57273 -0.0091286 0.00027728 -0.050303 0.00027728 0.85047 0 -0.0051227 0.31675 -0.024114 0 -0.013264 0.057192 0 -0.0066432 0.022138 -0.018553 0 -0.0036011 -0.036062 0 -0.0010633 0 0.0043021 0.11991 0.35964 0.00458 0.01708 0.00068159 0.15517 0.15591 0.25081 -0.0029537 0.085221 0.008892 0.50707 -0.034359 0 0.077862 0.00458 0.18086 0.0015255 -0.012351 0 0.0033299 -0.0016265 -0.03817 0.0065262 0.0027745 -0.086682 -0.72367 0.0058309 0.00083195 0.06494 -0.010596 0 0.24513 0.0094056 -0.0092666 -0.016154 -0.00013862 0.004719 -0.0044547 0.0022193 0.022865 0.0044411 -0.0095218 0 -0.0013858 0.15159 -0.013677 -0.5351 0 0.087969 0.015168 -0.41992 0.70624 0.28881 -0.00027724 0.42116 0 -0.0067106 -0.041442 0.44105 -0.0040963 0.0011493 -0.024803 -0.0048461 0.39824 0.11286 0 -0.023187 -0.0053008 0.0038854 -0.00055444 0.0057953 0.0056969 0.00069327 -0.0040162 0 0.24202 -0.0095426 0.014899 0.19184 0.033127 0 -0.014458 -0.03976 0.00013863 0.3913 0 -0.0013858 0.1434 0.48053 0.00082162 0.12226 0.14801 -0.01037 0.58417 0.25533 -0.0033243 0.067873 0.016644 0.0027745 0.0043021 0.00013863 -0.0013858 0.050392 0.024127 0 0.017124 9.3538e-05 0.27947 0.0043021 -0.0066432 -0.0123 0.62661 0.0024969 0.0055529 0.034113 0.003954 0 -0.017039 -0.0070909 0 0.68569 0.48057 -0.0087146 0 -0.0076101 -0.020961 0.0062481 -0.0019738 -0.019253 -0.026304 0.051814 0 0.0011093 0.055515 0.00097064 0.0015255 -0.016017 0.00069327 0.013772 0.0072217 -0.00069303 -0.013337 -0.020549 -0.10132 -0.084528 -0.013955 -0.013953 0.42867 -0.74994 -0.93111 -0.0027707 0.12108 -0.0013858 -0.0014038 0.60765 0.037217 0.0015255 -0.011473 0.56312 -0.001294 -0.68451 0.0063871 -0.019925 0.37891 0.13835 0.0051359 -0.00069303 -0.0016629 0 0.028652 -0.15672 0 -0.0087146 0.0038565 0.019257 -0.0037395 -0.0042929 0 0 0.0041632 -0.020687 0.32608 -0.053746 -0.00061359 -0.047395 0.0030522 -0.0012473 0.0016642 0.00069327 -0.021921 0.013213 0.53713 0.36117 0.0026357 0.0097276 0.025531 0.0013868 0.003191 -0.018508 -0.03184 0.00055459 0 0.0044411 -0.98414 0.11976 0.50077 0.19364 -0.026187 -0.011684 -0.0020784 0 -0.074625 0.47101 0.36529 -0.0039643 0.017932 0.45467 0.84899 0.00597 0 -0.048478 0.23562 0.15965 0 -0.00013862 Deletion Peak 6 - CN values 3p26.1 chr3:1-21472074(probes 259399:270706) chr3:5215017-5277098(probes 261083:261098) chr3:1-7646729(probes 259399:262224) 0.010931 0.18021 Actual Copy Change Given -0.022332 0.014246 0.32864 -0.3311 -0.18344 -0.00027724 0.072971 0.016494 0.26184 -0.0011087 0.014051 -0.37921 -0.0066432 -0.00055444 -0.0029091 -0.006505 0.0052749 -0.074811 -0.005814 -0.3231 0.013772 -0.0015243 -0.04565 -0.45128 -0.0033243 -0.35761 -0.34171 -0.14013 0 0.00055459 0 -0.023846 -0.0011087 0.00027728 -0.0042929 -0.0019399 0 -0.21849 -0.39953 -0.58206 0.56685 0.0019521 -0.40097 0 -0.00025303 0.22746 -0.25769 -0.0097146 -0.0069195 -0.096572 -0.005261 0.0044411 0.1679 0.0016642 -0.0038153 0.023566 0 -0.38033 -0.52996 0.0080567 -0.0080308 -0.015329 0.0062481 0.016006 -0.0044312 -0.0033243 -0.0015243 -0.35868 -0.0077482 0.00027728 -0.3694 0.46923 -0.3894 0.005061 -0.021144 -0.012162 0 -0.0055375 -0.0089511 0 -0.0038779 -0.0038205 0.015447 -0.32069 -0.037353 0.017703 0.018732 0 -0.012851 0.0047856 0.021467 0.0094147 -0.016388 0 0.0026759 0.026891 0.0070826 0.26608 -0.0042929 0.24093 0.0093024 0.09188 -0.53481 -0.012126 -0.0041546 0.15891 0.70491 -0.003725 0.019972 0.0020805 0.011539 -0.80314 -0.35396 -0.0096806 -0.00048683 0.20932 0.02882 -0.027331 0.44511 0.017963 -0.0035181 -0.26733 0.00061076 -0.48334 0.00097064 -0.0089906 -0.29366 -0.0024938 -0.0041546 -0.0062286 -0.024087 0.0055529 -0.006505 -0.0011087 0.016985 0.014649 0.019886 -0.055878 -0.0029635 0.0015073 -0.018078 -0.072274 -0.014778 -0.0072756 0.016006 -0.33219 -0.0055638 0.01299 -0.72084 -0.0029091 -0.13316 0.21837 -0.00080131 -0.65143 0.012237 -0.0031859 -0.0043931 -0.65162 -0.30298 -0.048749 0.024268 0 -0.0069195 -0.0046442 0.0044411 -0.014058 -0.25721 -0.27403 0.54947 -0.92518 0.027321 -0.00059126 0.36299 -0.049272 -0.99085 0.25019 -0.0042899 -0.0056757 -0.35847 0.00075894 -0.61552 -0.012576 -0.015713 -0.0013858 0.2003 -0.0022992 0.0048579 -0.017192 0.022674 -0.66087 0.081755 0.0027745 0.0016642 0.016845 -0.011611 0.00597 -0.016292 0.016619 -0.0055375 -0.68551 -0.0038779 -0.019314 -0.58038 -0.0023301 -0.013586 -0.010922 0.013118 0.22391 0 0.0083351 0.0019418 -0.0096018 -0.00097017 -0.012951 0.015727 0.0069435 -0.56099 0.025467 0.0018636 -0.0011087 0.095654 -0.0094046 -0.0057687 0.008892 0.0094491 0.00597 0.0015255 -0.0022924 -0.0076101 0.0019855 0.23985 0.18722 -0.038925 0.0015255 0.10249 -0.0048461 -0.14747 0.0055108 0.0019418 0.099433 -0.0019399 -0.03749 0.30953 0.011539 -0.1637 -0.0069195 -0.0012473 0.045708 0.41178 0 0 0.018383 0.00059071 -0.0031253 0.062556 -0.86321 0.0019418 -0.3904 0.0065401 0.0052749 0.010842 0.0036076 -0.0016629 -0.0070361 0.0030522 -0.32785 0.0022193 0.22317 0.066802 -0.0085766 -0.18194 0.55496 0.52048 0.0044411 -0.0045695 0.027216 -0.42702 0.0046603 -0.32832 0.035806 -0.011198 -0.093272 -0.0051227 -0.032178 0.014749 -0.0020784 -0.012713 0.011046 0.0036076 0 0.29374 -0.00027724 -0.02587 0.00097064 -0.49757 -0.0030551 -0.0025293 -0.00027223 0.0083351 -0.0016629 0.0070826 -0.62535 0 -0.41684 -0.76155 -0.29177 -0.024798 0.00055459 0 0.00055459 -0.86508 -0.052221 0.016576 0.29358 0.5156 0.00012831 -0.22047 0.13288 0.0023581 0.05523 0 -0.0022901 -0.087322 0.072621 -0.014503 0.010703 0 0.03214 -0.094328 -0.31073 -0.21057 0.2642 0.018103 0.0089611 -0.021469 0 0.029888 -0.020412 -0.28905 -0.013815 -0.67534 0.014259 -0.24703 -0.43479 -0.39096 -0.21404 -0.012848 -0.025243 0.1607 -0.0027707 -0.0089906 0.096089 0.0049969 0.0030182 0.03031 0.10002 0.057083 0 -0.0036011 -0.21107 -0.0008316 -0.0073339 -0.6509 0 -0.0053992 0 0.0036076 0.019128 0.0076392 0.037782 0.012237 -0.045364 -0.044144 -0.10841 0.0090312 -0.015865 0.0024969 -0.0008316 0.010842 0.16578 0.1129 -0.020035 -0.0019399 0.010006 -0.017116 -0.0020784 0 0.0069435 -0.02384 0 -0.33777 -0.0067813 -0.0008316 0.0012481 -0.042014 -0.063272 0.42066 0.053521 -0.0016629 0.0097276 0.025626 0.00023054 0.018803 0.0020805 -0.0084385 -0.000812 0.0015255 0.010703 0.049966 0.010006 0.012795 -0.0008316 0.17905 -0.0016629 -0.0013858 0 -0.015851 -0.016292 -0.014503 0.35626 0.024969 -0.073209 -0.038578 0 0.011121 0.1076 -0.0044848 -0.0056081 0.031718 -0.076412 -0.0044253 -0.00097017 0 0.054774 0.00086292 -0.0051227 -0.75054 -0.0008316 0.51316 -0.057789 0.02404 -0.4076 -0.0098185 0.066086 0.057939 -0.00091118 0.083054 -0.18181 -0.011624 -0.37121 0.0041632 Deletion Peak 7 - CN values 3p14.2 chr3:59701447-61547330(probes 292622:293005) chr3:59701447-61238217(probes 292622:292819) chr3:46617312-61287139(probes 285666:292859) 4.0204e-33 2.1148e-32 Actual Copy Change Given -0.022332 0.040044 -0.29946 -0.80749 -0.18344 -0.00027724 0.072971 0.016494 0.26028 -0.0011087 0.014051 0 -0.01365 -0.00055444 0.0048579 -0.006505 0.0052749 -0.074811 -0.005814 -0.32646 0.013772 -0.0015243 -0.40992 -0.93779 -0.0033243 -0.2624 -0.3461 -0.14013 -0.016181 -0.0023083 0 -0.026858 0 0.00027728 0.0052749 -0.0019399 0 -0.15911 0.033127 -0.5714 0.56685 0.0019521 -0.38465 0.015447 -0.00025303 0.22746 -0.25261 -0.0097146 -0.0023553 -0.096572 -0.56166 0.0044411 0.1679 0.0016642 -0.0038153 0.023566 -0.50857 -0.38033 -1.1376 0.0080567 -0.0080308 -0.015329 0.0062481 0 -0.0044312 -0.0085982 0.0068044 0.0441 -0.01055 0.00027728 -0.3694 -0.49417 -0.3894 0.0068044 -0.027307 0.013353 0 -0.0076101 0.0062481 0 -0.0099565 0.0030522 0.015447 -0.0057209 -0.034086 0.00069327 0 0 -0.029096 0.0047856 0.021467 0.010095 -0.016388 0 0.00076802 0.037101 0.0049969 0.24591 -0.0042929 0.24218 0.0093024 0.62242 -0.53481 0.0013868 -0.81112 0.10887 0.68981 -0.69812 0.019972 0.0020805 0.011539 -0.020606 -0.35613 -0.020549 -0.00048683 -0.33894 0.041179 -0.049743 0.44511 0.023886 -0.018701 -0.27428 0.0064435 -0.48334 -0.007472 -0.014109 -0.27012 -0.0012473 -0.0041546 -0.019314 -0.008877 0.0055529 -0.0024938 -0.0011087 0.016985 0.021247 0.019886 -0.0049588 -0.0029635 0.0015073 0 -0.00055444 -0.014778 -0.0072756 -0.0019399 -0.33219 0.010078 0.027554 -0.71004 -0.0042948 -0.13316 0.26058 -0.00080131 0.00073129 -0.49093 -0.020824 -0.0043931 -0.61852 -0.30298 -0.0037235 0.024268 0.00061825 -0.0041546 0.025876 0.0044411 0.0033918 -0.25721 -0.25913 0.54947 0.060222 0.027321 -0.0091653 0.422 0.015568 -0.98315 -0.31307 -0.64809 -0.0056757 -0.35847 0.00075894 -0.5791 0.0053476 -0.014206 0.046842 0.2003 -0.95275 0.0048579 -0.94945 0.022674 -0.58274 0.081755 -1.1766 0.056228 0.0078797 0.0043988 0.00597 0.020343 0.052789 -0.0055375 -0.68141 -0.0038779 -0.007472 -0.58038 0.0034687 -0.028201 -0.0087483 0.016845 0.22391 0 0.0083351 0.0019418 -0.017313 0.0011093 0 0.027919 0.072827 0.060624 0.014925 0.0018636 0.016286 -0.47395 -0.0020784 -0.0057687 -0.0041681 0.001803 -0.55156 -0.0020784 -0.0022924 -0.47554 0.0019855 -0.72057 0.18722 -0.038925 0.0015255 0.10253 -0.0048461 -0.15464 -0.73731 -0.01409 -0.37047 -0.0019399 -0.15431 0.30756 -0.0016629 -0.20759 -0.019126 -0.0012473 0.045708 0.44342 0 -0.0084709 -0.64659 0.00059071 -0.0031253 0.056228 -0.84966 -0.0022292 -0.078943 0.026092 -0.012989 0 0.0036076 -0.0016629 -0.020665 0.0030522 -0.32785 0.0022193 0.22201 0.066802 -0.0085766 -0.068529 0.55107 0.49718 0.0044411 -0.0045695 0.027216 -0.92696 0.0046603 -0.34113 0.035806 0.0037465 0.092605 -0.0051227 -0.028901 0.0078489 -0.005677 -0.0013858 0.011046 0 0 0.33415 -0.00027724 -0.0037395 0.00097064 -0.49757 0.0023581 -0.0025293 -0.00027223 0.0083351 -0.00023171 -0.0030475 -0.62169 -0.017047 -0.0020679 0 0 -0.024798 0.00055459 0 0.00055459 -0.82741 -0.052221 0.021899 0.30034 0.50866 0.00012831 -0.22047 0.13288 0 0.05523 0 -0.0022901 -0.078152 0.067886 -0.84395 0.035242 0 -0.96035 -0.094328 -0.95616 -0.21057 0.2642 0.0094491 0.0089611 0 0 0.029888 -0.020412 -0.28287 0.0044411 -0.66309 0.010911 -1.175 -0.10137 0.48268 -0.21404 -0.00069303 -0.033867 0.17136 -0.0027707 -0.0089906 0.096089 0.0049969 0.0030182 0.03031 0.10002 0.057083 0 0.00027728 -0.198 -0.0008316 0.0020805 -0.22355 0 -1.033 0 0.0036076 0.052383 -0.014366 0.071678 0.012237 -0.017803 0.012237 -1.0066 0.036512 0.059951 0.0024969 -0.0008316 0.010842 -0.038288 0.11851 -0.0016629 -0.0019399 0.010006 -0.71924 -0.0020784 -0.68342 0.012237 -0.02384 0 -0.33777 -0.085059 -0.0008316 0.00021342 -0.005261 -0.063272 0.46586 0.0097276 -0.0016629 0.0097276 0.025626 0.00023054 0.018803 0.0020805 0.0066653 -0.000812 0.669 0.010703 0.049966 0.010006 -0.023429 -0.0008316 0.18298 -0.0016629 -0.0013858 -0.011897 -0.00072293 -0.020478 -0.014503 0.35626 0.017418 -0.46972 -0.038578 0 0.017264 0.1076 -0.0084437 -0.0056081 0.038913 0.35381 0 -0.00097017 0.011998 0.054774 -0.0014934 -0.0051227 -0.75054 -0.0008316 0.51316 -0.057789 -0.68101 -0.4076 -0.0098185 0.066086 0.057939 -0.00091118 0.13354 -0.18181 0.031859 -0.36986 -0.3885 Deletion Peak 8 - CN values 3q26.31 chr3:174345545-175760559(probes 353555:354084) chr3:174148679-175760559(probes 353465:354084) chr3:174652143-174990763(probes 353753:353993) 1.8013e-23 1.8013e-23 Actual Copy Change Given -0.022332 0.039195 0.3141 0.27616 -0.19286 -0.00027724 0.063366 0 0.24875 -0.0011087 0.014051 0 0.0034687 -0.00055444 0.0048579 -0.0088281 0.0052749 -0.074811 -0.005814 -0.38425 0.013772 -0.32612 0.32205 -0.9955 -0.0033243 0.3348 -0.27789 -0.14013 -0.018628 0.00083195 0 -0.041288 0 0.00027728 0.0098669 0.019783 -0.045906 0.25849 0.20916 0.0060126 -0.046177 0.0027745 0.30202 0.008892 0 0.22746 0.26341 -0.017975 0.0027745 -0.096572 -0.0034627 0.0044411 0.1679 0.0066653 -0.0038153 0.023566 0.091155 0.38 -0.021292 0.0062481 0.010285 -0.0024938 -0.0056757 0 -0.0044312 0.0034687 0.0068044 -0.090417 0.017264 0.00027728 -0.3694 0.0066119 0.022024 -0.0015243 0.78324 0.013353 0.0066653 0.0068044 0.0062481 0 -0.62083 0.0030522 0.015447 0.31495 -0.034086 0.05025 0.022514 0.0040243 -0.029096 0.0047856 0.025113 0.40648 -0.016388 0.0065262 0.00076802 0.051245 0.0049969 0.24793 -0.0008316 0.28311 0.026935 0.62242 -0.53481 0.0013868 0.68738 0.63445 0.70528 0 0.019972 0.0020805 0.011539 0.48881 0.023426 -0.020549 0.0069435 0.19482 -0.035513 -0.096044 0.45428 0.022724 -0.018701 -0.26312 -0.0027146 0.015447 0 -0.0063668 -0.25455 -0.0012473 -0.0041546 -0.0024938 0.63664 0.0055529 -0.0024938 0.011261 0.025671 0.015511 0.35023 0.0131 0.00055459 0.013195 0.010424 -0.041388 0 -0.0072756 0.0020805 -0.32986 0.010078 0.033465 0.054376 0.0027745 0.56525 0.2187 0.007113 0.00073129 0.019923 0.0056919 0.0046183 -0.0046892 -0.30298 0.025687 0.024268 0.0013868 -0.0041546 0.68318 0.0076392 0.010717 -0.24082 -0.25913 0.54947 0.050279 -0.016849 -0.011212 0.44765 0.013194 1.0111 -0.023292 0.018526 0.0055529 -0.36079 -0.010094 -0.57977 0.014051 -0.016334 0.0066653 0.2003 0.043723 0.0098669 0.017188 0.022674 -0.58863 0.070817 0.017544 -0.024876 0.0078797 0.02525 0.00597 -0.0067813 0.052789 0 -0.68141 0.010424 -0.007472 -0.020001 0.0034687 1.0677 0.012655 0.0094491 -0.38951 0 0.0083351 -0.0078863 -0.0088435 0.0011093 0 0.056798 0.021744 0.060624 0.062443 0.0018636 0.027638 0.088114 -0.0020784 -0.0057687 -0.0084385 0.001803 -0.5203 0.39811 0.0077783 0.00458 0.011539 -0.23936 0.18722 -0.038925 0.0015255 0.10482 -0.0048461 -0.15464 0.001803 -0.012989 0.10716 -0.00013433 -0.034631 0.3227 -0.75331 0.23504 -0.0027707 0.0080567 0.045708 0.40911 0.013492 -0.0084709 0.0087528 0.014051 -0.029311 0 0.84113 0.008892 0 0.018372 -0.012989 0.00027728 0.015028 -0.0016629 -0.020665 -5.7129e-05 -0.30039 0.0022193 0.21286 0.0002588 -0.0019399 -0.03885 0.55107 0.49165 0.0044411 0 0.026918 0.04954 -0.004628 -0.34308 0.035806 -0.0017588 0.092605 -0.0051227 -0.022469 0.0078489 0.0049969 0.040326 0.016769 0 0 0.31049 -0.00027724 -0.0036011 0.00097064 -0.0015111 0.0023581 -0.0025293 -0.00027223 0.0083351 0.0033299 0.011261 0.14028 -0.015938 -0.23911 0.030647 0 -0.030677 0.00055459 0 -0.71533 -0.11235 -0.052221 0 0.30034 0.51107 0.00012831 0.14756 0.1431 0 0.05523 0 0.0019418 -0.081795 0.067886 0.0022193 0.014749 0 0.38353 -0.094328 -0.21032 -0.21057 0.2642 0.0094491 0.0089611 0 -0.0088853 -0.85242 -0.030267 -0.28263 0.0044411 0.027216 0.017054 -0.26709 -0.10137 0.39928 -0.24995 -0.00069303 -0.033867 0.16726 -0.0027707 -0.0089906 0.096089 0.0049969 -0.0021123 0.014609 0.10002 0.057083 0 0.00027728 -0.19669 0.0027745 0.0091705 -0.22863 0 0.0080567 0.010842 0.0036076 0.74689 -0.014366 0 0.012237 0.020623 0 -0.56376 0.042307 -0.92896 0.0024969 -0.0008316 0.010842 0.34093 0.93457 0.010285 -0.0019399 0.010006 -0.45372 -0.0020784 0.026106 0.012237 -0.028594 -0.0029091 0.043015 0.0044411 0.52013 -0.0060904 0.0065262 -0.063272 0.53323 0.0038854 -0.0049108 0.0097276 0.023706 0.0029133 0.018803 0.0020805 0.0066653 0.00055459 0.68719 0.010703 -0.78665 0.010006 0 -0.001466 0.16941 -0.0016629 -0.0013858 -0.011897 0.0282 -0.0051227 0.3633 0.35626 0.017418 -0.10854 -0.038578 0 0 0.1076 -0.0013858 0.008892 0.038913 0.69223 0 0.010146 0.0051376 0.052692 -0.00070688 0.0070826 0.037924 -0.31841 0.51316 -0.062226 0.019555 -0.4076 -0.0041546 0.15915 0.060651 0.012655 0.53344 -0.18181 0.024969 -0.74603 0 Deletion Peak 9 - CN values 4p16.2 chr4:1-10442121(probes 365353:370213) chr4:5953007-5996103(probes 367839:367883) chr4:5974229-5975173(probes 367862:367863) 0.14844 0.14841 Actual Copy Change Given 0.31001 -0.85733 -0.015344 -0.20809 -0.44983 -0.013225 -0.24009 -0.33634 -0.63623 0.0052749 -0.24216 -0.049154 0 -0.095912 0.0039046 -0.40191 -0.44607 0.1592 -0.13355 -0.89189 -0.64156 0.0011093 -0.87813 -0.010913 0.00027728 -0.11743 -0.42585 -0.15055 -0.025209 -0.01126 -0.73055 -0.050242 0.0066653 -0.0022494 0.0038854 0.0012481 0.013074 -0.48092 0.011679 -0.041567 0.99634 0.0026357 -0.090096 -0.37679 -0.053318 -0.078943 -0.26516 -0.019485 -0.013127 -0.14901 -0.0041546 -0.04577 -0.11835 0.00027728 0.0028373 -0.82697 -0.5096 -0.31314 -0.53565 -0.13685 0.013213 0 -0.0084385 -0.0053992 0 0.0066653 -0.0008316 0.022385 0 0.0069435 -0.38973 0.010789 0.013412 -0.013953 0 -0.42386 -0.00055444 -0.00055444 0.0084743 -0.00025735 -0.00027724 0.012655 -0.22194 0.2886 -0.030403 0.87288 -0.10667 0.0076392 -0.028901 0.041951 -0.63117 -0.45621 -0.034849 0.0036076 -0.0054173 0.0019418 -0.025209 0.23241 -0.0091286 -0.14888 0.0048579 -0.0099565 -0.5509 0.0043021 -0.80865 -0.4847 -0.015906 5.8334e-05 -0.11908 0.0062481 0.004719 -0.78979 0.0084743 -0.0034627 -0.0041546 0.086088 0.021621 -0.12934 -0.88735 -0.48355 0.0049969 -0.69518 0.0183 -0.52328 0.0022193 -0.025964 0.025646 -0.0031556 -0.0053426 -0.020825 0.0099817 0.0022398 -0.0055375 -0.0059522 -0.38312 -0.47379 -0.54831 -0.023129 -0.0089906 -0.49145 -0.11339 -0.0078785 -0.14515 -0.0038361 0.010006 -0.68013 -0.40744 -0.3506 -0.70717 -0.80551 -0.2991 -0.64274 -0.027231 -0.64956 -0.37095 0.00597 0.00198 -0.6641 -0.29963 -0.022591 -0.0045908 -0.0060904 -0.013766 -0.73604 -0.12628 -0.0069195 -0.25237 -0.51093 -0.024661 -0.43908 -0.010956 -0.022369 -0.42658 -0.011078 0.012163 0.1679 -0.021716 -0.0099565 0.0081959 -0.00037458 0.0080567 -0.024576 -0.0083005 0.0098669 -0.42003 -0.010094 0.014051 -0.0078237 0.023235 0.032422 -0.3044 0.0037465 -0.00069303 0.00055459 0.014051 -0.0092848 -0.019314 -0.4586 0.074688 -0.69131 -0.083775 -0.011335 -0.5795 -0.0012473 -0.0033243 0.0006194 0.016146 -0.36789 -0.0008316 -0.47184 0.00097064 -0.018961 0.0018973 -0.025756 -0.49736 -1.0127 -0.56407 -0.012225 -0.00077112 0 -0.49809 -0.0064415 -0.0027253 -0.0084952 -0.00041585 -0.030677 -0.013815 -0.0081385 -0.0062286 0.0041632 -0.6122 -0.25584 -0.0086532 0.0024969 -0.35281 -0.0033528 0.58704 0.023566 -0.011473 -0.33535 -0.010904 -0.075078 -0.45632 -0.67924 -0.19237 -0.0044312 -0.0081624 -0.096308 -0.39219 0.016985 0.76174 0.0065262 -0.0033045 -0.0012473 -0.0080244 -0.85599 -0.0059522 -0.25479 0.021463 0.0033299 -0.48586 -0.014228 -0.039665 -0.018606 0.00069327 -0.34802 -0.014778 -0.29684 0.0056919 0.023286 -0.507 -0.039529 -0.0088526 -0.0040156 -0.3463 0.020893 -0.43257 -0.02335 0.0026357 -0.0026322 -0.0037395 -0.035448 -0.016979 -0.044822 -0.0019724 -0.0016629 0.019083 -0.37263 -0.0053992 -0.055229 -0.22461 0.00097064 -0.0123 0 0.050392 0 0.00038039 -0.0046073 0.0057403 -0.0071958 0.0094491 -0.19087 -0.013685 -0.022733 -0.265 -0.34354 -0.24021 -0.0015243 -0.043466 0.0026357 0.37429 -0.091379 -0.10682 -0.21701 -0.012851 0.0024865 -0.40141 -0.14047 -0.027531 0 -0.016017 -0.012851 -0.16167 -0.71596 0.0043021 -0.015645 -0.015169 -0.055095 -0.053071 -0.31821 -0.21784 -0.52481 0.020343 -0.45847 -0.0071958 -0.023238 -0.56555 -0.050089 -0.2881 0.0036076 -0.29367 -0.017925 0.21131 0 -0.017116 -0.012024 0 -0.04211 -0.015191 -0.012191 -0.0081624 -0.0018014 -0.01067 -0.038203 -0.021784 -0.34664 -0.22675 0.00013863 0 -0.22465 -0.0029091 -0.0098185 -0.66855 -0.014228 0.0020805 -0.0071958 -0.00055444 0.0094491 -0.0044312 -0.045499 -0.077878 -0.52307 -0.012024 -0.1431 0.019223 0.060094 0.00055459 0 0.0040926 -0.36058 -0.5581 -0.33825 -0.0024938 -0.0040162 -0.012386 -0.00027724 -0.015741 0 0.016565 -0.064151 0.013492 0.0012481 0.00027728 -0.012438 -0.0067813 -0.066491 -0.5061 -0.0076101 -0.0123 -0.1143 -0.73354 -0.021373 -0.02151 -0.44943 0.010006 0.0054139 -0.015054 -0.47046 -0.090361 -0.5304 -0.032723 -0.0011087 -0.021647 -0.0015243 -0.018765 0.40612 -0.04586 -0.29756 -0.020957 -0.021689 -0.2429 0.018663 -0.07361 -0.0030475 0.020763 0.0016642 -0.0060904 -0.0018014 -0.23826 -0.48323 -0.005261 -0.011611 -0.34512 -0.52227 -0.048853 0.00055459 0.029747 -0.044763 -0.016704 0.0070826 -0.6663 -0.41787 -0.51177 -0.0026322 0.0019418 -0.00013862 -0.1281 1.0812 -0.47385 -0.39742 -0.0041546 Deletion Peak 10 - CN values 4q22.1 chr4:91271445-93240505(probes 415178:416110) chr4:91035787-92525194(probes 415016:415797) chr4:91177072-92486642(probes 415095:415778) 8.2698e-48 3.7685e-45 Actual Copy Change Given -0.020126 -0.84511 -0.021662 -0.86255 -0.4477 -0.00097017 -0.24119 -0.57363 0.16535 -0.0032766 -0.24216 -0.35099 0.0027745 0.20549 0.012934 -0.38414 -0.42942 0.14548 -0.13355 -0.9254 -0.60487 -0.0008316 0.35643 -0.65195 0.00027728 -0.35225 -0.042281 -0.39475 -0.025209 -0.01126 0.30202 -0.10776 -0.0047079 -0.05496 0.0038854 0.0012481 0.013074 -0.48092 0.015866 -0.041567 -0.070536 0.0026357 -0.090096 0.018243 -0.10996 -0.10631 -0.24655 -0.020721 -0.0029091 -0.14901 -0.0041546 -0.04577 -0.13339 0.00027728 -0.0052553 -0.78925 -0.48649 -0.29957 -0.52792 -0.13685 0.013213 0 -0.0084385 0.010285 0 0.018663 -0.74273 -0.6021 0 0.0069435 -0.38973 0.01749 0.0039641 -0.048748 -0.01276 -0.42386 -0.00055444 0.014749 0.0084743 0.015587 -1.1042 0.0114 -0.21255 -0.31474 -0.030403 1.0538 -0.080475 0.0076392 -0.043466 -0.5763 -0.60805 -0.45621 -0.016938 0.0087528 0.00597 0.023987 -0.0020784 0.21167 -0.027216 -0.50173 0.020063 -0.017666 -0.53979 0.0043021 0.013632 -0.4847 -0.0367 0.0016642 -0.11908 0.0062481 0.022585 -0.05542 -0.01037 -0.032131 -0.0041546 -0.81876 0.021621 -0.12934 0.61172 -0.48355 -0.013184 0.46451 5.6147e-05 -0.0064289 0.00055459 -0.66929 -0.10552 -0.00055444 -0.0053426 0.011679 0.0099817 0.036935 -0.0055375 0.0062481 -0.36782 -0.44443 -0.49746 -0.0078719 0.0040243 -0.45331 -0.81104 -0.0078785 -0.23887 0 0.013213 -0.0095426 -0.40744 -0.047882 -0.68278 0.012376 -0.31494 0.27758 -0.027231 -0.044514 -0.20573 0.019643 0.00198 -0.66565 0.41312 -0.019516 -0.0015243 -0.0060904 -0.013766 -0.69147 -0.10385 -0.19593 -0.25237 -0.51093 -0.024661 -0.43908 -0.015856 0.15155 -0.42658 0.0028946 -0.89404 -0.701 -0.016426 0.0026357 0.042166 0.0027745 0.0080567 0.013492 -0.042245 0.0098669 -0.42003 0 0.014051 -0.050039 0.023235 0.032422 -0.3065 0.0075 -0.88426 -0.00027724 0.055515 0.0095883 -0.019314 -0.4586 0.083342 -0.67564 0.012097 -0.011335 0.021884 -0.0012473 -0.0033243 0.0006194 0.024268 0.044432 -0.0008316 -0.47184 -0.029721 -0.0098777 0.0052749 -0.025756 -0.86978 -1.004 0.054634 -0.012225 0.014531 0 -0.49204 -0.0047079 -0.0027253 -0.014641 -0.00041585 -0.018078 -0.013815 0.0015255 -0.0062286 -0.0089906 -0.20809 -0.25584 -0.0056142 0.0024969 -0.35099 0.00027728 0.54048 -0.012162 -0.016154 -0.33535 0 -0.18345 -0.4244 -0.020412 -0.19237 -0.0044312 -0.0081624 -0.084262 -0.38649 0.016985 -0.88381 0.010703 0.015168 0.010424 -0.0080244 0.49158 -0.0059522 -0.25479 -0.49538 -0.042808 -0.50739 -0.0048461 -0.039665 -0.025735 0.0055529 -0.33156 -0.014778 -0.25948 -0.050641 -0.015837 0.12432 -0.039529 0 0.0063871 -0.3463 0.020893 -0.60003 -0.018122 0.0026357 -0.0026322 -0.0037395 -0.44351 -0.016979 -0.3617 0.012276 -0.0016629 0.019083 -0.37263 -0.0053992 -0.041024 -0.22461 0.00097064 0.029747 0 -0.012024 0 0.00038039 -0.51393 0.013772 -0.0045695 0.0094491 -0.14644 -0.027398 -0.37594 -0.25692 -0.34354 -0.047936 -0.012162 -0.043466 -0.0041546 -0.24546 -0.091379 -0.105 -0.21701 -0.012851 0.0024865 -0.35965 -0.11082 -0.0323 0 -0.006826 -0.014366 -0.15925 -0.68828 0.0043021 -0.57209 0.00097064 -0.90586 -0.053071 -0.29438 -0.21441 0.010006 0 -0.45847 -0.012989 -0.018765 -0.56555 -0.035721 -0.55387 0.0036076 -0.29367 0.0038151 -0.69866 -0.29632 -0.45886 -0.0096806 0 -0.03885 0.0041632 0.73758 -0.014228 -0.0018014 0.010285 -0.023873 -0.024524 -0.33121 -0.20311 0.00013863 0 -0.19956 0.0022193 -0.48187 -0.63462 -0.0035243 0.0020805 -1.0395 0.0016642 -0.073476 -0.023429 -0.045499 -0.077878 -0.6523 -0.070937 -0.11561 -0.70777 0.0072362 0.0093098 0 0.0040926 -0.36058 -0.5581 0.074265 -0.0024938 -0.0040162 -0.38235 -0.00027724 0.0022193 0 -0.028331 -0.014228 -1.2929 0.0081959 0.00027728 -0.0081921 -0.010526 -0.066491 -0.031118 -0.043264 -0.0123 -0.1143 -0.68113 -0.021373 -0.025893 -0.44943 0.010006 -0.0015243 -0.74872 -0.47046 -0.50505 -0.5304 -0.027945 -0.0011087 -0.022332 -0.0015243 -0.018765 0.41881 0.013492 -0.29756 -0.0078863 -0.021689 -0.2429 0.74651 -0.07361 -0.0030475 0.0027745 0.0016642 -0.0029091 0.020903 -0.23826 -0.48323 -0.005261 0.018383 -0.3255 -0.5283 -0.048853 0.00055459 -0.72994 0.0093098 -0.016704 0.010424 -0.6663 -0.41787 -0.51177 -0.0026322 0.0019418 -0.00013862 -0.14431 -0.64975 -0.4748 -0.38224 -0.0041546 Deletion Peak 11 - CN values 4q35.1 chr4:179280062-186507186(probes 463142:466104) chr4:184549518-185142643(probes 465631:465675) chr4:152665525-191154276(probes 448212:467482) 9.6913e-19 4.6363e-15 Actual Copy Change Given -0.011473 -0.86049 -0.00056965 -0.37323 -0.39541 -0.00097017 -0.24985 -0.28198 0.15188 -0.005814 -0.24216 -0.38078 0.0068269 0.10178 -0.011749 -0.0069195 -0.42942 -0.482 -0.13355 -0.52023 -0.60119 -0.35168 0.0097866 -0.92131 -0.00013862 -0.031768 -0.042281 -0.14939 -0.025209 -0.01126 0.27423 -0.11783 0.0081959 -0.096401 0.0038854 -0.00069303 -0.010094 -0.4595 0.008892 -0.063032 -0.76501 -0.0047079 -0.10675 0.011679 -0.10996 -0.63566 -0.27691 -0.039056 -0.018893 -0.14901 0.00013863 -0.04577 -0.14759 0.00027728 -0.0052553 -0.79261 -0.48187 -0.30792 -0.54616 -0.0063027 0.015028 0.0064907 0.00027728 -0.0040265 0 0.020483 0.0098669 -0.60916 0.0041632 -0.036265 -0.39625 0.01749 0.0039641 -0.048748 -0.030859 -0.40562 -0.00085196 0.0077783 0.0084743 0.0033299 0.015447 0.018943 -0.22833 -0.32475 -0.030403 -0.66139 -0.096903 -0.0070576 -0.81729 -0.58226 -0.60805 -0.45621 -0.016938 0.0087528 0.00597 0.012655 -0.0020784 0.20641 -0.027216 -0.50173 0.020063 -0.74968 -0.57365 0.0051359 -0.79836 -0.5912 -0.0367 0.0016642 -0.1213 0.0062481 0.019783 0.57801 -0.0024938 -0.0501 -0.26745 -0.29627 0.016006 -0.12934 0.61172 -0.49475 -0.026978 -0.34228 -0.0022992 -0.00027724 -0.012713 -0.014503 -0.86531 -0.00055444 -0.01562 0.0055756 -0.00044029 0.036935 -0.0055375 0.00458 -0.36839 -0.50615 -0.51434 0.0082217 0.0038637 -0.4616 -0.10724 0.10103 -0.23887 0.0008905 -0.44156 -0.0095426 -0.40744 -0.051651 -0.69405 0.012376 -0.31494 0.17558 -0.027231 -0.044514 -0.78707 0.019223 0.0029516 -0.66565 0.45632 -0.0099405 -0.020565 -0.0060904 -0.0095426 -0.0078227 -0.10385 -0.56853 -0.25189 -0.52726 -0.61518 -0.44759 -0.044992 -0.049595 -0.43104 -0.023995 -0.89504 0.31554 -0.0135 -0.0023553 -0.31799 0.0027745 -0.00069303 0.021463 -0.042245 -0.039496 -0.4256 -0.0048461 0.014051 -1.2929 0.023235 0.020071 -0.3065 0.02539 -0.042652 -0.008557 0.027142 0.0095883 -0.027398 -0.4586 0.045566 -0.69758 0.026386 -0.021097 -0.57989 -0.0012473 -0.020138 -0.67756 -0.93931 0.023938 -0.0008316 -0.47184 -0.022881 -0.02472 -0.01037 -0.033759 -0.56296 -1.0134 -1.1434 -0.025076 0.014531 -0.0088526 -0.51352 -0.010458 -0.0054922 -0.014641 -0.00041585 -0.015329 -0.013815 -0.0086989 -0.0038779 0.0087528 0.45905 -0.25697 -0.0056142 0.0044411 -0.35099 0.00027728 0.54495 -0.051451 -0.023292 -0.84803 -0.010451 -0.18345 -0.45351 -0.020749 -0.083333 -0.013677 -0.0081624 -0.084262 -0.39953 0.0011093 -0.050132 -0.70765 0.0054139 0.0094491 -0.0080244 -0.69137 -0.0059522 -0.37448 0 -0.034086 -0.50739 -0.0048461 -0.039665 -0.050146 0.0033299 -0.36181 -0.014778 -0.26468 -0.083598 -0.028901 0.12432 -0.044921 -1.1017 0.0027745 -0.34822 0.010006 -0.064643 -0.042981 0.0026357 -0.0026322 -0.47978 -0.46952 -0.016979 -0.028081 0.0074323 -0.0031859 0.015727 -0.37263 -0.0090703 -0.049019 -0.21438 0.00097064 -0.012908 0 -0.026566 0 -0.0080598 0.014056 0.013772 -0.014369 0.0094491 -0.63007 -0.027398 -0.42548 -0.25921 -0.34354 -0.057436 -0.53368 -0.043466 -0.0041546 -0.29993 -0.10361 -0.105 -0.21701 -0.012851 0.012645 -0.75386 -0.11752 -0.033132 0 -0.006826 -0.0081624 -0.15925 -0.70275 -0.011897 -0.57209 0.00097064 -0.0832 -0.053071 -0.30979 -0.21441 0.004719 0 -0.45847 0.013911 -0.037218 -0.56724 -0.035721 -0.28703 0.0049969 -0.30357 0.0096572 -0.69866 -0.30808 -0.090361 -0.36839 0 -0.046718 -0.028901 -0.0048461 -0.014228 -0.40986 0.010285 -0.010818 -0.014228 0.004719 -0.19337 0.00041593 -0.0067813 -0.19956 0.0022193 0 0.038898 -0.0071651 0.015447 0.024408 -0.0077482 -0.093271 -0.041024 -0.074628 -0.25152 -0.07067 -0.79076 -0.1653 -0.73553 -0.93392 -0.010922 0 0.013307 -0.36058 -0.44679 -0.79519 -0.0024938 -0.0040162 0.00083195 -0.00027724 -0.0024938 0 -0.035835 -0.046583 -0.70352 -0.0038779 0.00027728 -0.018216 -0.010526 -0.066491 -0.21691 -0.043264 -0.0123 -0.12845 -0.73091 -0.021373 -0.025893 -0.46589 0.0072217 -0.0079122 -0.013402 -1.0059 -0.10342 -0.53348 -0.041702 -0.0011087 -0.052961 -0.0015243 -0.018765 0.41479 0.0037809 -0.75477 -0.0078863 -0.012162 -0.2429 0.001803 -0.07361 -0.0030475 0.0114 0.0016642 -0.0029091 0 -0.23826 -0.93975 -0.005261 -0.0057338 -0.32725 -0.5283 -0.048853 -0.01825 -0.73784 -0.044957 -0.58304 0.010424 -0.6663 -0.46156 -0.50577 -0.0033243 0.0019418 -0.00013862 -0.14721 -0.65146 -0.48218 -0.36329 -0.0041546 Deletion Peak 12 - CN values 5q12.1 chr5:58998410-59780946(probes 498964:499350) chr5:58260298-59818245(probes 498419:499375) chr5:50968997-134247063(probes 493742:539383) 8.0336e-27 1.5702e-24 Actual Copy Change Given 0.30729 0.01433 -0.02029 -0.28658 0.32931 -0.0024938 -0.2463 -0.15905 -0.22392 -0.0062286 -0.2445 -0.37719 -0.66207 -0.035808 0.0052749 0.31932 0 0.15876 -0.12311 -0.51918 0.00458 0.32995 -0.37482 -0.62896 -0.0042929 -0.38022 -0.71185 0.13125 -0.027945 -0.0076101 -0.46419 -0.5226 -0.0013858 -0.018765 0.0036076 -0.0063345 -0.014916 -0.029465 -0.23904 0 -0.0083005 0 -0.13511 -0.36159 -0.27066 0.4294 -0.26504 -0.8178 0 -0.15873 -0.0048461 0 -0.014916 -0.00027724 0.0035315 0.0079175 -0.069085 -0.27476 -0.58141 -0.0048461 -0.012162 -0.0087146 -0.0056757 -0.0029091 -0.88411 0 0.0040243 0.057593 0.0027745 0.0034687 -0.037082 -0.00031826 0.0053724 -0.023566 -0.020047 0.011539 -0.011701 -0.0021787 -0.0011087 -0.0092666 -0.0056757 0.00027728 -0.021647 -0.023654 -0.040402 -0.66124 -0.70939 0.0055923 -0.038714 0.00020508 -0.036398 -0.57232 -0.49065 -0.0040162 -0.0044312 0.048546 -0.014366 -0.044144 -0.047124 -0.51445 0.016845 -0.022332 -0.038886 -0.010508 -0.0042929 0.10133 -0.0030748 -0.0026767 -0.2251 -0.0083005 -0.57674 -0.067647 0.00027728 0.50329 0.19269 -0.28655 -0.4197 -0.00090235 -0.045364 0.0015293 -0.027808 -0.34125 -0.0013297 -0.013815 -0.016567 0.23272 -0.41805 -0.010508 0.021183 0.020343 -0.0029335 -0.0091286 0.00041593 0.0011093 0.0075 -0.43849 -0.11609 0.84104 -0.0036011 -0.016848 0.26341 0.0022193 -0.53873 -0.015546 -0.01409 0 -0.28257 -0.60251 -0.69902 0 0.28707 -0.64293 -0.047983 -0.01047 -0.3133 0.0079175 -0.013364 -0.026279 0.10424 -0.092598 0.005844 -0.0051227 -0.0077482 -0.72646 -0.032041 -0.012396 -0.68296 -0.50939 -0.023703 0.094782 -0.018937 -0.034804 0.37686 -0.0012659 0.0076045 0.031718 -0.014913 -0.0078863 0.012207 -0.0051227 0.00013863 0.0049969 -0.015191 -0.0037395 -0.42648 -0.017598 0.022865 -0.020622 0.019032 -0.60274 -0.29662 -0.0096328 -0.029994 -0.00069303 0.0022193 -0.0063668 -0.019863 0.025725 -0.34905 0.029044 0.0062481 -0.011335 0.032845 -0.00069303 -0.0030475 -0.0064719 -0.00055444 -0.35909 -0.0084385 0.0022193 -0.026714 0.003548 -0.00013862 0.01059 -0.40948 -0.0123 -0.49492 -0.070167 -0.013066 0.034959 -0.50272 -0.013731 0.042779 0.36428 -0.0023553 -0.012438 -0.014602 -0.0081517 -0.0040162 0 0.10833 -0.18219 -0.29798 -0.00055444 -0.36289 -0.0050056 0.65921 -0.0092666 0.00072791 0.042024 -0.0029091 -0.22601 -0.01409 0.60047 -0.22478 -0.013677 -0.0036011 -0.10079 0.016324 -0.82765 -0.03861 -0.029448 0.0027745 0.0097324 -0.077478 -0.86989 -0.0070062 0.049114 -0.016292 -0.031632 -0.86814 -0.32693 -0.0066432 0.75627 -0.0044312 -0.0098185 -0.00079525 -0.28166 -0.2049 0.55443 0 -0.15464 -0.007472 -0.013953 0.06537 -0.012713 -1.2929 -0.022664 0 0.016565 -0.010094 -0.3634 -0.011473 0.00097064 -0.0027707 0 0.0057503 -0.8255 -0.016208 -0.029311 -0.23643 -0.0060904 0.0013868 0.017404 -0.0066432 -0.0016629 -0.0052964 -0.014105 -0.0055375 -0.50069 0.00458 -0.17929 -0.017666 -0.44209 -0.29964 -0.31961 -0.01354 -0.0087146 0.36723 -0.0051227 -0.26288 -0.096004 -0.13458 -0.022469 0.50377 -0.0020887 -0.37786 -0.28453 0.017824 -0.024251 0.25683 -0.0099565 -0.15989 0.056308 -0.0060904 0.018803 -0.0008316 0.089416 0.052436 0 0.36166 -0.065581 -0.088109 0 -0.0098185 0.40878 -0.029311 -0.051046 0.015866 -0.0001229 -0.43691 -0.0031176 0.049114 0.0020199 -0.026714 -0.10946 0.034536 0.51717 -0.036354 0 -0.01205 -0.3282 0.0024969 -0.44967 -0.18509 -0.026441 -0.46174 0.0011093 -0.00013862 0.33658 0.0027745 0.010006 0.11653 -0.021954 -0.021784 -0.0053992 0.0068044 -0.0091286 -0.0098185 0.0027745 0.019223 0.35218 0.00083195 -0.0047079 -1.2929 -0.9079 -0.0094046 -0.0123 -0.0052509 -0.19764 -0.00436 0.031718 -0.0085766 -0.005814 -0.00013862 -0.0029091 0.0043021 -0.0013858 0.42043 -0.17516 0.13998 0.0063871 -0.00055444 -0.0089906 -0.0080244 -0.037597 -0.5335 -0.0051227 -0.0031859 -0.050641 -0.70648 0 -0.021784 0.013213 0.0013396 -0.0041546 -0.01409 -0.47712 -0.17967 -0.020138 -0.040345 0 0.081177 -0.0029091 -0.02562 -0.017116 -0.021921 -0.10592 -0.021921 -0.017803 0.0040243 -0.38509 -0.0081624 -0.0022168 -0.020836 -0.0016629 -0.0059522 0.00013863 -0.19149 0.66919 0.1492 -0.0018014 -0.11439 -0.52074 -0.0075793 -0.0027707 0.006861 0.059223 -0.11168 -0.0083005 0.0026878 -0.43767 -0.031632 -0.017666 -0.84915 -0.0024938 -0.11848 -0.16179 0.021323 0.0054139 -0.0042929 Deletion Peak 13 - CN values 5q21.1 chr5:90456284-108085742(probes 515629:524071) chr5:100135051-100243110(probes 519945:519993) chr5:50968997-134247063(probes 493742:539383) 1.1167e-13 0.00017919 Actual Copy Change Given 0.30729 0.01433 -0.02029 -0.27118 0.32931 -0.0024938 -0.2463 -0.16307 -0.22392 -0.0062286 -0.24764 -0.0033343 -0.011473 -0.035808 0 0.31932 0 0.15876 -0.12311 -0.84331 0.00458 0.32995 -0.3847 0.19721 -0.0042929 -0.38022 -0.37255 0.11228 -0.027945 -0.0076101 -0.46419 -0.5226 -0.0013858 -0.018765 0.0036076 -0.0037395 -0.020549 -0.029465 -0.23904 0 -0.70917 0 -0.14914 -0.36159 -0.33658 0.4294 -0.26504 -0.021269 0 -0.14129 -0.0048461 0 -0.025408 -0.00027724 -0.0053009 0.0079175 -0.036674 -0.27476 -0.5629 -0.0012473 0.0034687 -0.021921 -0.0056757 -0.68942 -0.012851 0 0.0040243 0.057593 0.0027745 0.0034687 -0.027211 -0.76519 0.0053724 -0.023566 -0.036856 -0.41432 -0.011701 -0.0021787 -0.0011087 -0.0092666 -0.0069195 -0.74673 -0.021647 -0.028792 -0.040402 -0.66124 -0.68392 0.00091648 -0.038714 0.00020508 -0.036398 -0.43899 -0.49065 0.00041593 -0.0044312 -0.79235 -0.014366 -0.044144 -0.019589 -0.52404 -0.90896 -0.022332 -0.050243 -0.010508 -0.0042929 0.06413 -0.0030748 -0.0026767 -0.18768 -0.0083005 -0.57674 -0.12057 -0.75141 0.47233 0.19269 0 -0.4197 -0.00090235 -0.072814 -0.0012473 -0.027808 -0.35927 -0.0013297 -0.013815 -0.0027707 0.23272 -0.45713 -0.016567 -0.014085 0.020343 -0.0029335 -0.0091286 0.00041593 0.0062481 0.0075 -0.43849 -0.1092 0.78836 -0.0036011 -0.016848 -0.10066 0.0022193 -0.53873 -0.015546 -0.018071 0 -0.28257 -0.58522 -0.69902 0 -0.75875 -0.64293 -0.040315 -0.01047 -0.31949 0.0079175 0.0028128 -0.026279 0.10424 -0.11943 -0.0090483 -0.0051227 -0.0077482 0.0029038 -0.049541 0 -0.26745 -0.50939 -0.015191 0.057973 -0.018937 -0.055265 0.37686 -0.0012659 -0.0042128 -0.016841 -0.01874 -0.0078863 0.0077783 -0.6237 0.00013863 0.0049969 -0.015191 -0.0094046 -0.42648 -0.021784 0.022865 -0.020622 0.019032 -0.60274 -0.29662 -0.0096328 -0.029994 -0.00069303 0.004102 0.0015255 -0.019863 -0.4793 -0.34905 0.029044 0.0062481 -0.011335 0.0052749 -0.00069303 -0.0019399 -0.0022168 -0.00055444 -0.35909 0.0026357 0.0022193 -0.026714 0.003548 -0.0054977 0.01059 -0.40948 -0.0123 -0.46272 -0.22733 -0.013066 0.0023581 -0.50272 -0.013731 0.042779 0.36428 -0.0023553 0.0084743 -0.014602 0 -0.0040162 0 0.10833 -0.18219 -0.29501 -0.00055444 -0.36289 0 0.57418 -0.0023169 0.00072791 0.042024 -0.0029091 -0.22601 -0.0013858 0.60214 -0.52634 -0.013677 -0.0036011 -0.091287 0.016324 -0.98541 -0.036157 -0.029448 0.0027745 0.0080567 -0.077478 -0.88545 -0.0070062 0.049114 -0.88341 -0.039937 -0.19324 -0.32461 -0.0066432 0.76288 -0.0044312 -0.0098185 -0.00079525 -0.27199 -0.2049 0.55443 0 -0.16141 -0.007472 -0.013953 0.06537 -0.012713 -0.42549 -0.062432 0 0.015395 -0.010094 -0.3634 -0.011473 0.00097064 -0.0027707 0 -0.00088456 -0.8255 -0.016208 -0.029311 -0.23643 -0.0060904 -0.00043903 0.017404 -0.0066432 -0.0016629 -0.0052964 0 -0.0055375 -0.50919 -0.64996 -0.63339 -0.017666 -0.39924 -0.35182 -0.31961 0.098415 -0.0067813 0.36723 -0.0051227 -0.25092 -0.096004 -0.14245 -0.022469 0.47921 -0.0020887 -0.37786 -0.28453 0.017824 -0.024251 0.13095 -0.0099565 -0.15989 0.03984 -0.0049844 0.018803 -0.0008316 -0.93045 0.052436 0.015587 0.36936 -0.065581 -0.093667 0 -0.0098185 -0.46579 -0.023429 -0.051046 0.015866 -0.77507 0.12977 -0.0031176 0.011121 0.0020199 -0.4984 -0.10946 0.034536 -0.06786 -0.036354 0 -0.01205 0.063271 0.0024969 -0.44967 -0.18509 -0.026441 -0.46174 0.0011093 -0.00013862 -0.20945 0.0027745 0.010006 -0.68104 -0.021954 0 0.0066653 0.005186 -0.071205 -0.82391 0.0027745 0.088548 0.35218 -0.7788 0.0016642 -0.74808 -0.0089763 -0.0024938 -0.3963 0.0063871 -0.20199 -1.2929 -0.78729 -0.0085766 -0.005814 -0.00013862 -0.0029091 -0.66892 -0.8548 0.42043 -0.17516 -0.48691 -0.0026322 -0.00063293 -0.014916 -0.0080244 -0.037597 -0.5335 -0.0051227 -0.0031859 -0.078544 -0.69983 0 -0.021784 0.013213 0.023706 -0.0041546 -0.01409 -0.47712 -0.16558 -0.014366 -0.040345 0 0.05272 -0.0029091 -0.02562 -0.032241 -0.0018014 -0.14091 -0.021921 -0.017803 0.0040243 -0.38509 -0.0081624 -0.0022168 -0.020836 -0.0016629 -0.0059522 0.00013863 -0.19149 0.56496 0.1492 -0.0018014 -0.11439 -1.1481 -0.0075793 -0.0027707 0.006861 0.0075 -0.12681 -0.0083005 -0.0002252 -0.43767 -0.97594 -0.038578 -0.84915 -0.0024938 -0.11848 -0.17031 -0.018627 0.0054139 -0.0042929 Deletion Peak 14 - CN values 5q22.2 chr5:109202065-114915080(probes 524653:528356) chr5:112222695-112230268(probes 526656:526657) chr5:50968997-134247063(probes 493742:539383) 9.3993e-19 5.8551e-07 Actual Copy Change Given 0.30729 0.01433 -0.018368 -0.30814 0.32931 -0.0024938 -0.89389 -0.16307 -0.22392 -0.0062286 -0.25067 -0.0033343 -0.011473 -0.035808 0 0.31932 0 0.15876 -0.12311 -0.9096 0.00458 0.32995 -0.3847 0.19584 -0.0042929 -0.38022 -0.37255 0.11228 -0.027945 -0.0076101 -0.46419 -0.5226 -0.0013858 -0.051096 0.0036076 -0.0037395 -0.020549 -0.056846 -0.23904 -0.0076101 -0.74687 0 -0.14914 -0.36159 -0.33658 0.4294 -0.26504 -0.021269 -0.00097017 -0.14129 -0.0048461 0 -0.0026322 -0.0027707 -0.0053009 0.0079175 -0.041738 -0.27476 -0.59343 -0.0012473 0.0023581 -0.55737 -0.0056757 -0.68942 -0.012851 0 0.0040243 0.057593 0.016286 0.0034687 -0.027211 0.010789 0.0053724 -0.023566 -0.53909 -0.41432 -0.011701 0.0011093 -0.0011087 -0.011737 -0.0069195 -0.74673 -0.021647 -0.028792 -0.040402 -0.66124 -0.70357 0.00091648 -0.038714 0.00020508 -0.036398 -0.33908 -0.49065 0.00041593 -0.0044312 -0.0038779 -0.014366 -0.044144 -0.019589 -0.52404 -0.90896 -0.022332 -0.060515 -0.010508 -0.0042929 0.06413 -0.0030748 -0.0026767 -0.18768 -0.0083005 -0.57674 -0.12057 0.0013868 0.48332 0.19269 0 -0.4197 0.0058194 -0.072814 -0.52072 -0.027808 -0.35927 -0.0013297 -0.48472 -0.57575 0.23272 -0.45713 -0.010508 -0.014085 0.020343 -0.0029335 -0.0091286 0.00041593 0.0062481 0.0075 -0.43849 -0.1092 0.78836 -0.0036011 0.00053643 -0.9748 0.0086135 -0.53873 -0.015546 -0.018071 0 -0.28257 -0.58522 0.049824 0 -0.74438 -0.64293 -0.040315 -0.01047 -0.30663 0.0079175 0.0028128 -0.011179 0.10424 -0.14617 -0.0090483 -0.0051227 -0.0077482 0.0029038 -0.049541 0 -0.27882 -0.50939 -0.027671 0.057973 -0.024011 -0.055265 0.37686 -0.0012659 -0.0042128 -0.016841 -0.01874 -0.63434 0.0077783 0.73113 0.00013863 0.0049969 -0.015191 -0.0094046 -0.42648 -0.021784 -0.0023553 -0.020622 0.019032 -0.60274 -0.30808 -0.0096328 -0.077078 -0.00069303 0.004102 0.0015255 -0.019863 -0.4793 -0.34905 0.021603 0.0062481 -0.034904 0.0052749 -0.00069303 -0.0019399 -0.0022168 -0.00055444 -0.35909 -0.0011182 0.0022193 -0.026714 0.003548 -0.0054977 0.01059 -0.40948 -0.0123 -0.46272 -0.22733 -0.013066 0.0023581 -0.49592 -0.013731 0.042779 0.36428 -0.0023553 -0.034636 -0.014602 0 -0.0040162 0 0.10833 -0.23264 -0.29501 -0.55477 -0.35544 0 0.57418 0.00041593 0.00072791 0.042024 -0.00041585 -0.22601 -0.0013858 0.60214 -0.22071 -0.8848 0 -0.091287 0.016324 -0.98541 -0.036157 -0.029448 0.0027745 0.0080567 -0.077478 -0.86755 -0.0070062 0.037415 -0.91001 -0.039937 -0.19324 -0.32461 -0.0066432 0.76288 -0.85074 -0.0098185 -0.00079525 -0.27199 -0.2049 0.55443 0 -0.16141 -0.0022168 -0.013953 -0.80923 -0.012713 -0.42549 -0.062432 0 0.027638 -0.010094 -0.88974 -0.011473 0.00097064 -0.0027707 0 0.0094491 -0.8255 -0.016208 -0.029311 -0.23643 0.0019418 -0.00043903 0.017404 -0.0066432 -0.66615 0.0069078 0 -0.0055375 -0.50919 -0.64996 -0.64249 -0.017666 -0.39924 0.04704 -0.31961 0.098415 -0.0067813 0.36723 -0.0051227 -0.25092 -0.096004 -0.14245 -0.022469 0.47921 -0.0020887 -0.37786 -0.28453 0.017824 -0.024251 0.13095 -0.0099565 -0.15989 0.03984 -0.0049844 0.027919 -0.0008316 0.071535 0.052436 -0.33941 0.36936 -0.065581 -0.093667 0 -0.024251 -0.46579 -0.023429 -0.051046 0.015866 0.00071262 0.11917 -0.0031176 0.011121 0.0020199 -0.4984 -0.10946 0.03214 -0.06786 -0.036354 0 -0.01205 0.063271 0.0024969 -0.44967 -0.18509 -0.026441 -0.46174 0.0011093 -0.00013862 -0.20945 0.0027745 -0.00069303 -0.68104 -0.016429 0 0.0066653 0.005186 -0.071205 -0.82391 -0.03817 0.081755 0.35218 -0.80468 -0.023977 -0.74808 -0.0089763 -0.0024938 -0.3963 0.0063871 -0.20199 -0.0082294 -0.78729 -0.0085766 -0.005814 -0.00013862 -0.77507 -0.66892 -0.8548 0.42043 -0.17516 -0.48691 -0.0040162 -0.00063293 -0.014916 -0.0080244 -0.037597 -0.5335 -0.0051227 -0.0031859 -0.078544 -0.70845 0 -0.021784 0.0052749 0.0015663 -0.0041546 -0.01409 -0.47712 -0.16558 -0.023566 -0.040345 0 0.05272 -0.0029091 -0.02562 -0.022744 -0.0018014 -0.14091 -0.021921 -0.017803 0.0040243 -0.37358 -0.0081624 -0.0022168 -0.020836 -0.0016629 -0.0059522 0.00013863 -0.19149 0.56496 0.1492 -0.0018014 -0.11439 -1.1481 -0.0075793 -0.0027707 0.006861 0.0075 -0.12108 -0.0083005 -0.0002252 -0.43767 -0.04983 -0.038578 -0.84915 -0.0024938 -0.11848 -0.17031 -0.018627 0.0054139 -0.0042929 Deletion Peak 15 - CN values 6p25.3 chr6:1608837-2624052(probes 568026:568718) chr6:1621405-2252425(probes 568029:568445) chr6:1684657-2344621(probes 568071:568488) 7.1067e-19 7.0658e-19 Actual Copy Change Given -0.0098185 0 -0.022896 -0.0093769 0.086675 -0.0056757 -0.23704 0.010296 -0.11639 -0.0022168 0.096089 0.20488 0.0056919 -0.030813 -0.012576 0.26483 0.0097276 -0.051451 -0.010646 -0.40473 0.013213 -0.0089906 -0.44059 0.0085768 0.00055459 0.57143 0.030836 0.21352 0.0015255 -0.0051227 0.2355 0.11081 0.0011093 0.0051359 0.0052749 0.013772 0.0081959 0.0075256 0.0072217 0.032704 0.00083195 -0.00055444 0.26122 -0.37999 -0.16457 0.39645 0.085943 -0.019211 0.0034687 0.14266 -0.017529 0.0034687 -0.10053 0.0026357 -0.0038153 0 1.8424 -0.00068857 0.026315 -0.0041546 -0.049695 -0.0095426 -0.0030475 -0.0034278 0.026514 -0.012438 -0.023977 0.027914 0.0083351 0.0019418 0.0416 -0.34863 0.02525 -0.00041585 -0.017438 0.018803 -0.00069303 -0.006505 -0.012885 0.0040243 0.00021201 -0.0030475 0.024689 0.42593 0.7042 0.013632 0.55257 0.0049969 -0.039937 -0.011269 0.017687 0.28735 0.44771 0.0026357 0.0011093 -0.064432 -0.0047223 0.051672 -0.43214 0.17242 -0.93644 -0.0096806 0.017507 -0.95254 -0.01072 -0.12148 -0.0076373 -0.0026322 -0.005903 0.0024969 0.0068509 0.63912 0.0011696 -0.019177 -0.00041585 -0.52747 -0.014916 -0.26667 -0.035176 0.024829 -0.023292 0.59512 -0.0022992 -0.0091286 0.012795 -0.14875 0.079015 0.39263 0.52836 -0.031487 0 -0.046871 -0.014916 0.0012481 -0.38179 -0.43957 0.092895 0.016591 -0.0063668 0.4372 0.10804 0.024829 -0.044009 -0.0065737 -0.012438 -0.0094046 -0.049373 -0.1165 0.033127 -0.43116 -0.06585 0.074408 0.51232 -0.65311 0.19299 -0.23924 -0.0093666 0.34829 -0.30674 -0.51351 0.014051 -0.0091271 -0.0081624 0.047759 0.5455 0.00079852 -0.2812 0.58508 -0.023703 -0.040616 0.050783 -0.014953 -0.0045695 0.0035603 0.030591 0.34844 0.47581 -0.0094705 0.16445 -0.047395 -0.61383 0.011261 -0.010232 -0.71764 0.47564 -0.16548 -0.013953 0.018027 -0.0080741 -0.70615 0.098997 0.001803 0.085076 0.0043021 -0.0089906 0.0066653 0.016845 0.046755 0.0070869 0.037782 0.019923 0.5649 0 -0.45843 -0.017254 0.64579 0.0040243 0.058224 -0.0022168 -0.47986 -0.013402 0.10447 0.00048284 -0.036946 0.45652 0.031718 0.59958 -0.011123 -0.11464 0.00597 0.096816 -0.0063668 0 0.40344 0.019643 0.0019418 -0.0030475 0.017124 -0.0063668 -0.54583 -0.15183 0.19269 0.082974 -0.38951 0.10731 -0.085488 -0.15029 0.045141 0.031859 0.10482 0.0012481 0.099433 0.13924 0.031999 1.4364 -0.00017532 0.00069327 0.27363 -0.0053992 0.0013868 -0.028933 0.020903 0.0041632 -0.010646 0.021043 -0.12556 -0.0018014 -0.016908 0.0024969 0.54877 0.14266 0.0062481 -0.012851 -0.014619 0 0.085799 0.0052749 0.0012689 0.019643 -0.0042929 -0.48502 0.55107 -0.56992 -0.24216 -0.28964 -0.013127 0.0030522 -0.0091869 0.029044 -0.00013862 0.00083195 0.77272 0.045424 -0.022469 -0.0020784 -0.0015243 0.72603 0.0096524 0.036088 0.39994 -0.23264 0.0034687 0.040892 0.0029133 0.010982 0.0029133 0.0039887 -0.0089857 -0.024388 -0.0056757 -0.010784 0.25043 -0.011198 0.27055 -0.30047 0.05025 -0.56714 0.32286 0.39463 -0.0047079 0.23906 0.093389 0.24965 -0.017116 -0.011611 0.018792 -0.041702 -0.082137 -0.018353 0.0030522 -0.0030012 -0.0036011 0.19999 0.16882 -0.010094 -0.0092666 -0.00055444 0.046275 -0.17436 0.02539 -0.21849 -0.0084385 0.0075 -0.4794 0.0079175 0.41212 0.0049969 0.12948 -0.21392 0.011539 -0.29236 0.0052045 0.21131 -0.0047683 0.067088 -0.76115 -0.041702 0.54859 0.44494 0.0024969 -0.0027707 -0.21193 -0.00069388 0.34449 0.0058309 -0.016979 0.14816 0.0033299 -0.024114 0.16325 0.039902 0.0016642 0.17754 -0.0067813 -0.0071958 -0.006505 0.0065262 0.0012481 -0.01179 -0.0040023 -0.16777 0.011539 0.011539 0.7005 0.029044 -0.0081481 0 -0.0049844 0.00041593 0.11475 0.83422 -0.82773 -0.0056757 0 1.1033 -0.0034627 -0.69024 1.5389 0.41061 0.50794 0.24809 -0.0051227 -0.005261 0.42099 -0.0073339 0.035695 0.45645 0.033972 0.013632 0.034536 -0.12092 0.0056919 0.024408 -0.010094 -0.0023553 -0.00097017 0.0051359 0.028763 0.57487 0 -0.021373 -0.00055444 -0.013402 0.010006 -0.0094046 -0.014641 0.004719 0.25699 0.34182 -0.0048461 0.010982 -0.34044 -0.0020784 -0.0023918 0.0054139 -0.0026322 0.0351 0.0037465 0.35169 0.54153 -0.053206 -0.0027707 0.0011498 0.30726 0.028513 0.00089005 0.021463 0.024653 0.49268 0.0052749 0.011452 0.042632 0.46111 -0.00085861 -0.01409 0.0062481 0.45037 0.26954 0.023847 -0.82788 0.0040243 Deletion Peak 16 - CN values 6q26 chr6:161693099-163153207(probes 659115:659758) chr6:161767520-163153207(probes 659156:659758) chr6:162128544-162136391(probes 659458:659459) 3.0351e-42 3.0351e-42 Actual Copy Change Given -0.023018 0 -0.022896 0.019503 0.056896 -0.0056757 -0.24277 0.041952 -0.15694 0.0020805 -0.0019399 0.20451 0.61371 -0.030813 -0.73214 -0.087844 -0.0019399 -0.10594 -0.005261 0.06308 0.013213 0.32963 0.13421 -0.025382 0.00055459 0.063939 0.030836 -0.16548 -0.042788 -0.0051227 0.2355 0.12152 0.0011093 -0.028565 -0.013127 0.0051359 -0.00013862 0.0055299 0.013074 -0.28655 -0.011257 -0.00055444 0.26122 -0.0022168 -0.16457 0.39645 0.033477 -0.025763 -0.0018014 0.096879 -0.012989 0.0034687 -0.10053 -0.0033303 -0.010032 0 0.019223 0.0029133 -0.60462 -0.0041546 0.006109 -0.046989 -0.010508 -0.0041546 0.010757 0.0037465 0.0033839 0.044089 0.0083351 0.0058546 0.0416 -0.0042077 0.021647 -0.0083005 -0.32581 0.43834 -0.00069303 0.0084743 -0.0047082 0.0091705 0.00597 0.013772 0.010251 0.55437 0.7042 0.14593 0.49761 0.0048579 -0.046854 -0.011269 0.017687 -0.13616 0.44771 0.0026357 -0.0034381 -0.0027707 -0.0013362 -0.06142 0.80364 0.19801 -0.92436 -0.025893 0.017507 -0.015173 -0.81005 -0.21144 -0.024278 -0.0029605 -0.005903 -0.0044312 0.016985 0.62617 -0.75952 -0.01089 -0.00041585 -0.32577 -0.0077482 -0.26931 -0.055634 0.024268 -0.027628 -0.17828 0.0051922 -0.0091286 -0.0036205 -0.15285 0.43651 0.387 0.50967 -0.0072202 -0.017779 0.017124 0 -0.0087146 -0.38179 -0.47715 0.52269 0.0010634 -0.0063668 0.45256 0.080312 0.066802 -0.026486 -0.016783 -0.27953 -0.0094046 -0.057393 -0.014998 -0.70073 0.0083351 -0.076945 -0.064777 0.49964 -0.011711 0.1792 -0.25688 -0.0084005 0.25232 -0.31307 -0.53278 -0.0087146 -0.0088526 -0.0063668 -0.77876 0.53178 0.0060222 0.43581 0.034688 -0.018902 -0.088904 -0.004051 -0.014953 -0.05158 -0.017685 0.010982 0.012934 0.41346 -0.0083005 0.027357 -0.0038779 0.0056919 -0.0016629 -0.021373 -0.0031859 0.44088 -0.16548 0.010982 -0.0047835 -0.031818 -0.031821 0.098997 0.001803 -0.99569 -0.04577 0.00097064 0.0066653 -0.019314 0.046755 -0.33929 0.023566 0.003191 0.54647 0 0.0087528 -0.052544 -0.031905 -0.00041585 -0.40771 -0.0022168 -0.47986 -0.013402 0.12381 0.00048284 -0.039801 -0.42724 -0.0029091 -0.54251 -0.033194 -0.0079641 -0.023018 0.056639 -0.012438 -0.0089454 0.37907 0.019643 -0.056846 0.41396 0.0029133 -0.0063668 -0.00013862 -0.15707 0.13362 0.082003 0.0013868 0.095746 -0.0031859 -0.16714 -0.76826 -0.0031859 0.090575 -0.0008316 -0.35795 0.14799 -0.0026322 -0.16459 -0.0026007 -0.015741 0.27363 -0.046041 -0.0045695 -0.95001 0.023005 0.0041632 -0.00097017 0.021043 0.38926 -0.0018014 -0.34458 -0.012341 0.49666 0.14995 -0.039468 -0.012851 -0.10143 0 0.099433 -0.011611 0.0091915 0.022585 -0.023703 -0.48079 -0.072839 -0.55267 -0.23227 -0.26913 -0.013127 0.020118 -0.004213 0.032986 -0.00013862 0.32237 0.58739 -0.017212 -0.040345 0.0027745 -0.0083005 0.76044 0 -0.021098 0.3837 -0.26408 0.0034687 0.0019418 0.0029133 0.010982 -0.018359 -0.0012828 0.0073659 -0.010633 -0.0011087 0.011261 0.26279 -0.011198 0.25857 0.013408 0.05025 -0.033269 -0.015054 0.41061 -0.0038779 0.26325 0.10297 0.25293 -0.010922 -0.013064 0.018792 -0.041702 -0.081339 -0.048058 0.0030522 -0.029857 -0.0083005 0.18459 0.17476 0.0094491 -0.31984 -0.00055444 -0.98015 -0.17436 0.02539 -0.21849 -0.0084385 0.0052749 -0.46696 -0.0081624 0.41212 0.02525 -0.043466 -0.21627 0.0086135 -0.32785 0.0084039 0.19878 -0.0047683 -0.24776 0.00597 -0.038034 0.53362 1.0885 -0.0033911 -0.010554 -0.12992 -0.0053992 -0.049593 0.0029133 -0.016979 0.14816 -0.005814 -0.0012473 0.1804 0.00055459 0.00458 0.12594 -0.012162 -0.0069204 -0.019452 0.011958 0.015308 -0.01179 -0.041431 -0.16853 -0.0099565 -0.014503 0.59721 0.029044 -0.92569 -0.0038779 -0.0049844 0.00041593 0.09321 1.2835 0.049238 -0.0056757 0 -0.044144 -0.0034627 -0.01106 -0.040416 0.41061 -0.033677 0.11242 0.0069435 -0.005261 0.35104 0.00013863 0.035695 -0.46102 0 0.0065262 0.01433 -0.14952 -0.0057522 -0.032587 -0.010094 -0.016139 -0.00097017 -0.0097916 0.012097 -0.14747 0 -0.029721 -0.00055444 -0.01849 -0.0016083 -0.0094046 -0.014641 0.00053338 0.092315 0.34616 -0.01106 0.010982 0.029044 0.0020805 -0.00055444 0.0075 -0.015879 0.0087528 0.0024969 0.28913 0.014609 -0.053206 -0.01037 -0.0238 0.28656 -0.013339 0.0012481 -0.76643 0.023145 0.47169 -0.0016629 0.012847 -0.010508 0.4657 -0.0026322 0.00027728 0.0022193 -0.097627 0.27789 0.019503 -0.0056955 -0.0034123 Deletion Peak 17 - CN values 7q31.1 chr7:110746146-111366370(probes 719616:719643) chr7:110236682-111354928(probes 719358:719637) chr7:110535012-110544716(probes 719498:719499) 4.5193e-05 4.44e-05 Actual Copy Change Given 0.68645 0.012237 0.54469 -0.48428 0.0084338 0.0065262 -0.011611 0.84327 0.18874 -0.0047079 0.016312 0.33755 -0.0081624 0.064797 -0.0020784 0.73891 0.42863 0.37948 0.20167 0.055373 0.018523 0.33011 0.70251 -0.86289 0.001803 0 0.088364 0.36308 0.75242 0.30393 1.1242 0.53625 0.0079175 0.00083195 0.0038854 0.0016642 -0.0098185 0.50116 -0.0087146 0.54524 0.63335 0.0033299 0.3923 0.3486 0.15788 0.78871 0.063652 0.70296 -0.0184 0.31803 -0.0018182 0.0037465 0.47358 0.14295 0.43723 0.032747 -0.0036011 1.1121 0.57462 0.22422 0.00013863 0.544 0.50724 0.67641 0.89748 0.70991 -0.0010703 0.28304 0.0038854 0.012097 0.35993 -0.0036543 0.38168 -0.0018014 0.45065 0.0041632 0.7317 -0.0056757 0 -0.005814 -0.0041546 0.0027745 0.0044411 -0.007379 0.68917 0.70949 0.61072 -0.0022168 0.71509 0.11983 0.017827 0.23067 0.43366 -0.0044312 -0.0024938 0.027216 0.024865 0.67511 -0.019726 0.30282 0.84601 0.30921 0.5333 -0.0091286 0.0043021 0.62588 0.81841 -0.0059522 0.033177 0.0080567 -0.013677 1.2659 0 0.47157 0.30154 0.40077 -0.01106 0.2226 0.72112 0.47255 0.73834 0.39081 0.01062 0.834 -0.0070576 0.012376 0.19451 0.38866 0.97317 1.197 -0.0047322 0 0.0050759 0.0036076 0.016006 0.45738 0.021043 0.8375 0 0.0027563 0.11917 -0.035295 0.051103 0.58048 0.99613 0.77272 0.34987 0.12129 0.04812 -0.0032126 0.05623 0.23457 0.51877 0.5809 0.62063 0.24435 0.62102 0.017458 0.08132 0.53241 -0.0045695 -0.0013858 0.43114 0.62269 0.00013863 0.020879 0.08551 0.60631 0.54242 0.074284 0.010342 0.77704 -0.0099565 0.0039335 0.031014 0.31235 -0.68897 -0.0099565 0.019223 0.68273 0.64616 0.010285 0.29533 0.73967 0.92701 0.005036 -0.00055444 -0.81995 0.086036 0.0058309 0.57755 0.0015255 0.0012481 0 -0.00080919 0.0019009 0.62733 0.49085 -0.0024938 1.6442 -0.0066432 -0.0059522 0.019783 0.0073609 -0.0098185 -0.66263 -0.0045695 0.50481 -0.0013858 0.49061 -0.021784 0.002715 0.0022193 0.93801 0.054945 0.016425 0.63514 0.7954 0.82638 0.018523 0.071619 0.80694 0.0012935 0.35283 -0.00055444 -0.54663 0.80228 -0.0053442 0.41764 0.00013863 0 0.31388 0.31409 0.00027728 0.10249 0.0040243 0.51037 0.69562 -0.00027724 -0.36208 -0.0019399 0.22576 0.42419 -0.0037395 0.14206 -0.0031859 0.72263 0.8015 -0.0092666 0.028481 0.33363 0.020343 0.49987 0.015866 -0.05634 0.015952 0.021463 -0.0010265 0.80538 0.7549 0.54139 0.59554 0.79433 0.73523 0.00027728 -0.019177 -0.0048461 0.038369 0.28364 -0.0089906 0.87428 -0.061286 -0.031632 0.482 0.52748 0.7173 0.035524 -0.023624 0.0036042 0.0015255 -0.005814 0.36854 0.15393 0.35398 0.46234 0.0044411 0 0.086733 0.01433 0.40327 0.29453 -0.0049844 0.0087528 0.019223 0.0035799 0.015447 0.0037109 0.50707 0 -0.0501 0.0114 0.70645 0.48406 0.66115 -0.26449 -0.19099 0.38344 -0.0024938 0.93122 -0.0049844 -0.12772 0.131 0.53029 0.0040243 0.51089 0.0094387 0.34145 0.17178 0.26106 0.0029133 0.47773 0.38122 0.077377 -0.72389 0.085076 0.14474 0.012655 0.038638 0.40127 0.3928 0.38568 0.51333 0.022164 0.0015255 -0.010646 0.4168 0.0076392 0.80947 0.016845 0.0038854 0.66087 -0.00039408 0.59242 0.28732 -0.088904 0.0041632 0.7353 1.0857 0.51664 -0.0018014 -0.0056716 0.38358 0.0037465 0.43881 0.30697 0.2904 0.055943 -0.00041585 -0.0034627 0.16355 -0.0013035 -0.0061788 -0.23283 0.55038 -0.005814 -0.72039 0.11389 -0.01615 0.73967 0.85146 0.35871 0.51281 0.040892 0.69409 0.71867 0.51352 -0.00021655 0.36805 0.003191 0.5789 1.1038 -0.047067 -0.0011485 -0.0011087 -0.020138 -0.00027724 0.015308 -0.005261 0.42095 0.31177 0.90479 0.0072217 0.00027728 0.38667 -0.0018014 -0.066357 0.52639 0.0052749 0.025671 0 0.57113 0.0048579 0.53011 0.44469 0.0019418 0.60394 -0.025275 0.017264 0.16055 0.48234 -0.032723 0.0040243 0.10599 -0.0024938 0.65885 0.41672 -0.0059224 1.105 0.40928 0.3592 0.14627 0.40482 0.90774 0.013353 -0.010094 0.10982 -0.00013862 -0.0040162 0.21653 0.46144 0.26404 -0.0036011 0.52298 0.043768 0.018974 -0.0011087 0.70382 0.3973 0.52485 0.79452 0.026145 0.064082 0.033408 -0.0088526 0.44596 -0.0059522 0.1601 0.27837 -0.049559 0.026233 0.25683 Deletion Peak 18 - CN values 8p23.2 chr8:1-4985851(probes 744494:746820) chr8:2784419-4854274(probes 745262:746674) chr8:1-35258655(probes 744494:764977) 4.4343e-09 4.189e-05 Actual Copy Change Given 0.32882 -0.8646 1.278 -0.54905 -0.82675 -0.32704 -0.76411 0.11805 -1.174 -0.013815 -0.25247 -0.77158 -0.034086 -0.84624 -0.72888 -0.42265 -0.6531 -0.49497 0.22283 -0.69124 0.0016041 0.0052749 -0.006505 -0.64933 0 -0.44534 -0.041467 0.22667 -0.83041 -0.31494 0.00097064 -1.1842 -0.0067813 -1.0086 0 -0.0037395 0.42755 -0.52082 -0.67573 0.016985 -0.75418 -0.0037382 -0.41291 -0.76231 0.32553 -0.65305 0.032845 -0.83585 -0.0061024 -0.18572 -0.0099565 -0.0040162 -0.25564 -0.0019399 0.0035315 -0.81417 -1.1039 -0.80391 -1.1702 -0.013953 -0.0016629 -1.1171 -0.58667 -0.71826 0.8296 -0.0081624 0.00071221 0.13888 0.68124 -0.0016629 -0.38403 -0.002506 0.013719 -0.70684 0.43254 0.3669 0.72225 -0.025346 0.61118 0.00041593 -0.62169 0.0054139 -0.39886 -0.35286 0.70759 -0.89955 -0.91482 -0.99539 -0.7926 -0.78003 -0.77651 -0.96619 -0.50564 -0.006488 -0.0048461 -0.87204 0.87468 -1.0708 0.11067 -1.0159 -0.0037395 -0.74412 -0.57173 0.757 -0.013066 -1.0744 -0.62635 -0.0041546 0.8656 0.00031563 -0.59283 -0.80924 -0.0034627 -0.58868 -0.22955 -0.84147 -0.88193 -0.77239 -0.013815 0.41346 0.74575 -0.81359 -0.0042369 0.39728 0.53485 0.23878 0.31691 -0.010094 0.25507 -0.016292 -0.004179 -0.00055444 -0.0041752 0.0030522 0.018243 0.010348 -0.65025 -0.019056 0.00597 0.36754 0.052383 0.044007 -0.59391 0.57816 -0.38929 -0.027124 -0.5145 -0.21943 -0.72712 -0.0022168 -0.46089 -1.0734 -0.57701 -0.64834 -0.34527 0.21755 0.0010089 -0.59125 0.47907 0.50969 -0.0099007 -0.0031859 -0.0019399 -0.7518 -0.027124 -0.58451 0.060365 0.00070366 -0.60022 0.055658 -0.010756 -0.88251 -0.59935 -0.062782 -1.0014 -0.66541 -0.025519 -0.012156 -0.34676 -0.00027724 -0.045228 -0.009764 -0.28418 -0.044415 -0.84363 0.015447 0.86295 1.0475 0.016602 0.022865 0.09638 0.64268 -0.90373 -0.078106 0.099198 -0.022456 -0.6314 -0.020908 0.2573 0.016845 -0.86636 -0.015054 -0.57654 -0.0011087 -0.0048461 -0.01409 -0.97461 -1.2494 -0.006505 -0.0031859 -0.89151 0.015527 0.0027745 0.7001 -0.82301 -1.0961 0.011792 -0.84671 0.81834 -0.014503 -1.0608 -0.015879 0.05371 -0.40274 0.6898 -0.016567 -0.89051 -0.0045695 -0.0091286 -0.0012572 -0.70015 -0.72128 0.2555 0.062937 -0.78376 -0.015466 0.55673 0.033408 -0.09578 0.097252 0.47667 -0.43561 -0.0059522 -0.67371 -0.59721 0.80208 -0.0080244 0.60539 -0.39063 -0.00041585 -0.51515 -0.73143 -0.0080244 0.00097064 -0.0070576 -0.86029 0.75605 0.2369 -0.90069 0.51472 -0.23202 -0.68232 0.44477 0.78469 -0.010784 -0.48271 -0.019589 -0.75813 -0.43963 -0.77005 -0.13833 -1.2929 0.5088 0.25012 0.53483 -0.019274 -0.96742 -0.93835 0.012237 0.016146 -0.016017 -0.936 0.0368 0.18722 -0.0023553 -0.039529 -0.90768 -0.89615 0.62879 -0.049019 0.28074 -0.0016629 0.85677 -0.0040162 0.51403 0.00083195 0.0013512 0.47727 0.76226 0.46109 0.010006 0.52625 -0.49611 -0.7902 0.062994 -0.78345 -0.58157 -0.53815 -0.95507 0.70026 -1.011 0.33631 0.67771 -0.81137 0.5039 -0.016714 -0.61393 0.13806 -0.014778 -0.7715 0.18283 0.3407 -0.62646 -0.77383 -0.0036011 0.03369 -0.0047079 -1.0018 -0.36465 0.29932 0.010146 -0.56406 -0.089169 -0.0067813 -0.6875 0.88246 -0.90949 -0.44351 0.2974 -0.0026322 -1.0529 -0.015811 -0.73503 -0.30268 -0.99311 0.0086135 0.72319 1.5816 -0.2341 0.73151 -0.59019 -0.50277 -0.0049844 -0.99209 -0.61499 0.40044 -0.55156 -0.0030475 0.012934 -0.24506 -0.0080244 -0.015741 -0.29863 0.43733 0.69764 -0.14055 -0.60786 -0.83025 -0.016292 -0.85377 -0.33237 -0.063032 -0.7853 1.0394 -0.068261 -0.94889 -0.02517 -0.0089906 -0.0066432 -0.69334 -0.021988 -0.83962 0.008892 -0.017666 -0.66679 -0.79954 -0.69703 0.77579 -0.028218 -0.0832 -0.27057 0.0114 -0.56296 0.38684 0.22299 0.052983 -0.23829 -0.50216 0 0.12609 -0.026299 0.011958 -0.61365 -0.0068954 -0.0024938 -0.022332 -0.0091286 -1.0279 0.046275 -0.54037 -0.58547 0.14503 -1.0177 0.14667 -0.7627 -0.053874 -0.031325 0.13421 -0.42811 -0.8201 -0.52869 -0.80642 -0.40722 -0.0040162 0.014888 -0.011198 -0.6926 -0.0047079 -0.19119 0.75242 0.21852 -0.0059522 0.25782 -0.541 -0.674 -0.0087146 -0.78853 -0.76527 -0.015466 -0.0026322 -0.70196 -0.014641 0.49078 0.93447 -0.89266 -0.0015243 -0.12095 -1.1664 0.027497 0.00458 0.25386 Deletion Peak 19 - CN values 8p22 chr8:15092726-16722285(probes 751473:752476) chr8:15273726-15624424(probes 751591:751813) chr8:1-35258655(probes 744494:764977) 6.2829e-14 3.5237e-10 Actual Copy Change Given 0.32882 -0.8646 1.278 -0.54905 -0.82675 -0.31156 -0.75046 0.11805 -1.174 0.00013863 -0.23851 -0.77158 -0.034086 -0.84624 -0.71826 -0.39493 -0.6531 -0.49497 0.22283 -0.69124 0.0016041 0.0052749 -0.022881 -0.64933 0 -0.44534 -0.041467 0.23798 -0.81925 -0.31494 -1.0008 -1.1842 -0.0067813 -0.93245 0 -0.0037395 0.42755 -0.52082 -0.67573 0.016985 -0.75418 -0.0037382 -0.41291 -0.75878 0.32553 -0.65305 0.032845 -0.83585 -0.0061024 -0.18572 -0.0099565 -0.0040162 -0.24265 -0.0019399 0.0035315 -0.81046 -1.0484 -0.79832 -1.1702 -0.013953 -0.0016629 -1.1024 -0.58667 -0.71826 0.8296 -0.0081624 0.00071221 0.13888 0.68124 -0.0016629 -0.38392 -0.002506 0.013719 -0.70684 0.43254 0.36969 0.72225 0.00089284 0.61118 0.00041593 -0.62169 -0.001304 -0.39886 -0.35286 0.70759 -0.89955 -0.91482 -0.0063668 -0.7926 -0.78003 -0.74855 -0.96619 -0.50564 -0.006488 -0.0048461 -0.87204 0.87468 -1.0769 0.11067 -0.98794 -0.0037395 -0.74412 -0.57173 0.757 -0.84615 -1.0744 -0.62635 -0.0041546 0.8656 0.00031563 -0.59283 -0.79356 -0.76945 -0.57338 -0.22955 -0.84147 -0.83341 -0.77239 -0.03245 0.41346 0.74575 -0.81359 -0.0042369 0.39728 0.53485 0.23878 0.31691 -0.010094 0.28101 -0.016292 -0.004179 -0.00055444 -0.0041752 0.0030522 0.018243 0.035729 -0.65025 -0.019056 0.00597 0.36754 -0.79111 0.0558 -0.56843 0.57816 -0.38929 -0.034495 -0.49209 -0.21943 -0.72712 -0.0022168 -0.46089 -1.0734 -0.57701 -0.64834 -0.33664 0.23365 0.0010089 -0.59125 0.47907 0.58993 -0.0099007 -0.0031859 -0.0019399 -0.010858 -0.027124 -0.58451 0.090518 0.00070366 -0.60022 0.05694 -0.010756 -0.86399 -0.59935 -0.012043 -1.0014 -0.66541 -0.025519 -0.012156 -0.34676 -0.00027724 -0.045228 -0.009764 -0.29005 -0.0055414 -0.84363 0.015447 0.86295 -0.96184 0.026182 0.022865 0.09638 0.64268 -0.90373 -0.024524 0.099198 -0.022456 -0.6314 -0.020908 0.32576 0.016845 -0.8103 -0.015054 -0.57654 -0.0011087 -0.0048461 -0.01409 -0.96498 -1.2272 -0.006505 -0.0031859 -0.89151 0.015527 0.0027745 0.72527 -0.82301 0.020063 0.011792 -0.83029 0.81834 -0.0078863 -1.0608 -0.015879 0.05371 -0.40274 0.6898 -0.016567 -0.41377 -0.0045695 -0.0091286 -0.0012572 -0.70015 -0.72128 0.2555 0.062937 -0.76436 -0.015466 0.55673 -0.7756 -0.09578 0.097252 0.47667 -0.43561 -0.0059522 -0.67371 -0.22699 0.80733 -0.0080244 0.60539 -0.39063 -0.99646 -0.47281 -0.73143 -0.0080244 0.00097064 -0.0070576 -0.86582 0.75605 0.2369 -0.90069 -0.83106 -0.23202 -0.66652 0.93122 0.78469 -0.010784 -0.48271 -0.019589 -0.75813 -0.43963 -0.77005 -0.13833 -1.2929 0.5088 0.25012 0.58505 -0.019274 -0.93371 -0.9011 0.012237 0.016146 -0.016017 -0.936 0.0368 -0.41751 -0.0023553 -0.0094046 -0.85551 -0.89615 0.62879 -0.038714 0.28074 -0.0016629 0.85677 -0.0040162 0.51403 0.00083195 0.0013512 0.47727 0.78813 -0.090361 0.010006 0.52625 -0.49611 -0.77879 0.062994 -0.78345 -0.58157 -0.53815 -0.95507 0.70026 -0.97098 0.33631 0.67771 -0.81137 0.50672 -1.0326e-05 -0.61393 0.13806 -0.014778 -0.7715 0.18283 0.3407 -0.62646 -0.77383 -0.0036011 -0.77141 -0.0047079 -0.96121 -0.36465 0.37957 0.010146 -0.014366 -0.089169 -0.0067813 -0.67196 -0.95087 -0.85845 -0.81794 0.2974 -0.0026322 -0.31506 -0.015811 -0.73503 -0.30268 -0.99311 0.0086135 0.72319 1.5816 -0.2341 0.73151 -0.59019 -0.50277 -0.0049844 -0.96989 -0.61499 0.40044 -0.55156 -0.0030475 0.012934 -0.22441 -0.0080244 -0.015741 -0.29863 0.43733 0.69764 -0.14055 -0.60786 -0.83025 -0.016292 -0.85377 -0.33237 -0.063032 -0.7853 1.0394 -0.78286 -0.91784 -0.01106 -0.0089906 -0.0066432 -0.67416 -0.021988 -0.83962 0.0067 -0.017666 -0.66679 -0.79954 -0.69703 0.77579 -0.028218 -0.62169 -0.27057 -0.39797 -0.56296 0.38684 0.22299 0.052983 -0.23829 -0.50216 0 0.12609 -0.026299 -0.54007 -0.61365 -0.0068954 -0.0024938 -0.0082934 -0.0091286 -1.0279 0.046275 -0.54037 -0.5713 0.14503 -1.0177 0.14667 -0.7627 -0.041159 -0.031325 0.13421 -0.42811 -0.8201 -0.52869 -0.78518 -0.3203 -0.0040162 -0.20162 -0.011198 -0.6926 -0.0047079 -0.19119 -0.93907 0.21852 -0.0059522 0.25782 -0.541 -0.674 -0.0087146 -0.77209 -0.76527 -0.0037395 -0.0026322 -0.70196 -0.014641 0.49078 0.93447 -0.8657 -0.0015243 -0.12095 -1.1664 0.027497 0.00458 0.25386 Deletion Peak 20 - CN values 8q11.1 chr8:42883855-47750537(probes 769084:769209) chr8:42932479-47463861(probes 769100:769101) chr8:42933373-47464064(probes 769101:769102) 0.062382 0.065041 Actual Copy Change Given 0.32882 -0.0064794 1.278 1.1318 0.27553 0.72964 1.0205 0.14064 1.0072 0.00013863 0.20427 0.6299 -0.013285 -0.79193 -0.71826 -0.39493 0.19923 0.22407 0.22283 -0.39834 0.010703 0.33189 -0.022881 0.21825 0 -0.4097 -0.041467 0.21693 0.80733 0.80422 0.01363 1.5694 -0.0067813 -0.062495 0 -0.0037395 0.40761 1.337 0.74778 0.00029531 0.60435 -0.0037382 1.1578 0.54612 0.32553 -0.15108 0.032845 -0.01206 0 -0.18572 -0.0099565 -0.0040162 0.12918 -0.0019399 0.0010333 0.075415 -0.01106 0.81981 1.3338 -0.013953 -0.0016629 2.0818 1.4834 0.68999 0.8296 -0.0081624 0.00071221 0.13888 0.68124 -0.0016629 -0.38392 -0.002506 0.013719 -0.011198 0.41988 0.0016642 0.72225 0.00089284 0.61118 0.00041593 1.2567 -0.001304 -0.39886 0.8137 0.67963 1.2791 0.39272 -0.0063668 -0.76398 0.29477 -0.0039965 0.46327 2.3272 -0.006488 -0.0024085 -0.0092666 0.87468 -0.046718 0.096884 0.65093 -0.0037395 0.61734 1.0337 0.77349 -0.041702 -0.50058 0.7627 -0.0041546 0.8656 0.0036076 0.48664 0.60243 -0.0049398 -0.55246 0.10264 0.18646 -0.051451 0.95115 -0.03245 0.41346 0.74575 0.083776 -0.0042369 0.38245 0.53485 0.23878 0.31842 -0.010094 0.28101 -0.016292 -0.004179 -0.00055444 0.00055459 0.0030522 0.018243 0.42612 -0.47131 -0.013877 0.00597 0.38891 0.089416 0.042449 0.46133 0.57816 0.024127 -0.0011261 1.0709 1.0826 0.016292 0.0021919 0.22253 1.4269 0.51459 0.57706 0.61154 0.22403 0.0010089 0.5603 0.47907 0.55011 -0.0099007 -0.0031859 -0.0019399 0.011464 -0.027124 1.445 0.090518 0.00070366 0.53458 0.05694 -0.010756 1.1097 0.4402 -0.012226 2.6767 1.2868 -0.018075 -0.012156 -0.33017 -0.00027724 1.1624 -0.009764 2.1736 -0.0055414 0.029466 0.015447 0.86295 -0.027473 0.026182 0.037924 0.08673 0.64268 1.0241 -0.031275 0.15472 -0.0023553 -0.024661 -0.020908 -0.3551 0.016845 0.83215 -0.015054 -0.58096 -0.0011087 -0.0048461 -0.01409 2.6248 0.071898 -0.006505 -0.0031859 -0.032041 0.020843 0.0027745 0.72305 0.88946 -0.99395 0.011792 2.3483 0.83263 -0.0078863 1.4305 -0.015879 0.05371 -0.0091286 0.6898 -0.016567 0.0097276 0.006109 -0.0091286 -0.0012572 0.69465 0.56934 0.24081 0.062937 0.83687 -0.015466 0.55673 0.022725 0.54541 0.097252 0.47667 0.0467 -0.0059522 -0.014503 -0.23277 0.80733 -0.0080244 0.60539 -0.39063 0.0097276 -0.47281 0.01419 -0.0080244 0.00097064 -0.0070576 0.047781 0.75605 0.2369 0.87787 0.47055 1.8076 1.1718 0.45343 0.77166 -0.0019399 0.26796 -0.0076637 0.42404 0.42755 0.51472 0.17392 1.0277 0.48871 0.25012 0.59845 -0.018078 0.30154 -0.049076 0.012237 0.016146 -0.016017 0.79142 0.0368 0.18419 -0.0023553 -0.0094046 1.0918 0.13235 0.6267 -0.038714 0.28074 -0.0016629 0.85677 -0.0040162 0.51403 0.00083195 0.0013512 0.47727 -0.85098 0.41747 0.010006 0.52625 0.45632 0.821 1.6575 0.052668 0.91554 0.87528 0.74802 0.69494 0.49014 0.33631 0.65466 -0.25866 0.49701 -1.0326e-05 0.074265 0.13806 -0.014778 0.68962 0.18283 0.3407 1.204 0 -0.0036011 3.6569 -0.0047079 -0.92398 2.3433 0.37957 0.010146 0.20947 -0.089169 -0.0067813 0.63445 -0.012851 -0.82684 2.0657 0.29278 -0.0026322 -0.31506 -0.015811 0.15402 0.1194 0.38601 -0.010989 0.72319 1.5485 -0.023292 0.73151 0.66315 1.503 -0.0049844 0.86826 1.42 0.40044 0.75091 -0.0030475 0.012934 0.26812 -0.0080244 -0.015741 0.10103 0.43733 0.69764 -0.054857 0.99136 0.72962 -0.016292 -0.85377 0.017684 -0.018902 0.21945 0.97443 0.66272 -0.91784 -0.01106 -0.0089906 -0.0066432 0.87265 -0.031289 0.02511 -0.0013124 -0.017666 0.49493 0.069095 1.1416 0.77579 -0.028218 0.58059 0.034959 0 0.53309 0.38684 0.22299 0.052983 -0.23829 0.71888 0 0.25777 -0.069466 -0.012525 0.022164 -0.0062286 -0.0024938 -0.0082934 -0.0091286 1.2445 0.046275 -0.54037 0.98121 0.14503 1.6984 0.14667 1.8635 2.1422 -0.013087 0.13421 0.7808 0.70626 0 1.3065 0.11081 -0.0040162 -0.062361 -0.011198 -0.0067813 -0.0047079 -0.19119 0.24669 0.21852 -0.010784 0.26035 0.48162 -0.017773 -0.0087146 0.72168 1.3806 -0.013402 -0.0026322 -0.015827 0.0070826 0.49493 0.93447 0.77579 -0.0015243 -0.096968 1.0703 0.027497 0.00458 0.25386 Deletion Peak 21 - CN values 9p21.3 chr9:21524354-22448737(probes 838793:839333) chr9:21959052-21977193(probes 839020:839021) chr9:21720944-22293598(probes 838867:839244) 0.037327 0.038253 Actual Copy Change Given -0.0056134 0.035665 -0.0015395 0.37331 -0.19624 0.003191 0 -0.21274 0.34616 -0.0013858 -0.095648 -0.13846 0.0063871 0.073115 0.040609 0.27096 0.014608 -0.011478 0.17498 0.034959 0.0029133 -0.0037774 0.3499 0.0077417 -0.0022168 -0.3519 -0.36638 -0.020549 0.012795 0.13246 -0.07067 0.071815 0.0027745 0.0045596 0.0029133 0.0073609 0.0035838 -0.49736 0.010424 0.038571 -0.022881 -0.0008316 0.29917 0.075415 -0.14924 -0.086518 -0.2624 0 0.0084743 -0.095912 0.012097 0.0037465 0.73038 0.13954 0.0015882 -0.16764 0.51664 -0.044144 0.55542 0.043582 -0.011198 0.01807 0.0036076 0.0063871 -0.0011087 -1.2929 -0.007472 -0.25774 -0.0081624 -0.005261 -1.2929 -0.0021315 0.0017007 0.65516 -0.00073974 0.0052749 0.0056919 -0.0040992 0.0012481 -0.72826 -0.0075783 0.0013868 0.010703 0.30021 0.70065 -0.12187 -0.030679 0.0076392 0.68257 0.31169 0.016289 -0.013298 -0.46117 0.0016642 0.0075 0.020903 0.84988 -0.023851 0.023847 -0.10224 0.0098669 0.61317 0.0085718 0.59854 0.013213 0.12592 0.0076118 0.0055529 0.66777 -0.0045695 -0.010232 -0.006398 -0.00041585 -0.01224 0.19744 -0.27021 0.029606 0.049376 0 0.021043 0.00051842 -0.30792 0.0039416 -0.48502 0.00013863 -0.0008316 0 0.0024921 -0.00013862 0.0013592 0.013607 0.0070377 0.0014294 -0.0008316 0.033127 0.039118 -0.52849 0.90738 -0.0059522 0.029025 0.13007 0.011755 -0.016841 0.58442 0.9595 -0.64029 0.36076 0.067719 0.028622 0.012097 0.040609 -0.20255 0.50051 0.62684 -0.27892 0.011818 0.0044794 0.0054326 -0.29213 -0.55986 -0.0076101 0.0049969 0.0049969 0.019147 -0.57249 -0.010351 0.063509 0.039489 0.00041593 -0.37763 0.039867 0.050135 0.44206 -0.0085709 0.047836 -0.0081624 0.0095914 0.00041593 0.025567 0.62624 -0.11391 0.0052749 0.016286 0.0063871 0.051814 0.0033299 0.0019418 0.01216 -0.0065548 0.021603 0.10789 0.0077783 0.030873 0.048972 0.0051359 0.016772 0.00013863 0.45401 0.278 -0.68651 -0.012438 0.0030964 -0.25648 0.0024969 0.010146 -0.0087146 -0.92331 0.040185 0.0062481 -0.0027707 0.0057353 1.1623 -0.0016629 0.50811 0.013772 0.03369 -0.093031 0.007235 -0.0072736 -0.0020784 0.062331 0.003283 0.001571 -0.37964 -0.0037395 -0.072274 -0.40451 0.0051359 0.011679 -0.00027724 0.17136 0.94058 -0.066058 -0.0016629 -0.57467 0.0081959 0.69521 0.015109 -0.0047079 0.31643 0.0040243 -0.2217 0.0037465 0.16295 0.19299 -0.0062789 0.0066653 0.11462 -1.2929 0.015168 -0.013434 0.0056919 0.48613 0 -0.021784 -0.86227 0.057368 0.069095 0.055088 -0.0016629 0.07254 -0.0067813 0.0075 0.0002989 0.00041593 0.17633 0.00027728 0.63228 -0.20261 0.010285 -0.60642 -0.60371 -1.0468 0.0033299 0.094056 0.74651 -0.43072 0.0067456 -0.32577 0.0020805 0.011121 -0.01037 -0.0079911 0.011539 -0.0012473 0.0062481 -0.0069195 0.047475 0.00013863 0.39446 -0.22416 0.0026357 -0.0044312 -0.00013862 0 0.00083195 -0.0014213 -0.014223 0.0043021 0 0.003191 -0.61556 0.015727 0.57953 0.071432 0.40477 -0.55757 0.006109 -0.020412 -0.0045172 0.48233 0.10239 0.47221 0.2708 -0.005261 0.00096031 1.1288 0.1388 0.0076392 -0.011335 0.25871 0.0024969 -0.11737 -0.25085 -0.0033243 0.020343 -0.0056757 -0.94474 -0.17145 0.017963 -0.196 -0.21392 0.022725 0.010842 0.0080567 0.84652 0.026795 -0.055634 -0.28917 -0.00069303 0.3592 0.0095179 0.28453 -0.31791 0.0083351 0.00069327 0.0025563 -0.023018 0.34437 0.00069327 0.0052749 -0.37403 0.013353 0.019048 0 0 0.031436 0.0030522 0.21002 0.15487 -0.00041585 -0.0076101 0.047966 -0.021378 -0.01663 0.00097064 -0.58147 0.050819 0.012516 0.088837 0.016845 0.49372 0.03369 0.75452 0.039902 -0.0038509 -0.0078022 0.003191 0.0030522 0.66823 -0.40699 0.32157 0 0.003943 0.56721 0.00027728 0.023005 0.758 0.42704 0.36707 0.099325 0.0068044 0.0015255 -0.0027707 -0.01354 0.0022494 1.8158 0.046417 0.011261 0.016351 -0.33676 0.015587 0.0086135 0.0093098 -0.0030475 0.0058309 0.010424 -0.45902 -0.38638 0.017963 -0.037354 -0.0030475 0 0.00055459 0 -0.015494 0.0114 -0.027322 -0.016154 0 0.016006 0.068665 -0.0026322 0.0091705 0.016565 0.10417 0.0040243 0.0093098 0.29929 0.76331 -0.0018014 0.0013868 0.05798 0.42541 0.029919 0.00027728 -0.75374 -0.059538 1.1764 0.52818 0.71121 1.0274 -0.017941 0.016705 0 0.0062481 0.37298 -0.05037 1.0274 -0.36295 0.25746 Deletion Peak 22 - CN values 10p15.3 chr10:1-5407870(probes 893272:896462) chr10:1-484158(probes 893272:893318) chr10:1-645915(probes 893272:893326) 0.12928 0.13215 Actual Copy Change Given -0.0076101 -0.018353 0.556 -0.026561 -0.17865 -0.013816 -0.57051 0.6236 0.26797 0.0027745 -0.10542 -0.02701 -0.014228 -0.16026 -0.039394 -0.0083005 -0.1877 -0.46248 0.0022193 0.042645 0 0.00458 0.95795 0.26024 -0.023213 0.057653 0.0023212 0.27616 0.0094491 -0.0037395 -0.2061 -0.0053689 -0.0058263 0.014749 -0.010508 -0.0020784 -0.20796 -0.50453 -0.046226 -0.22638 -0.073743 -0.0023553 -0.026988 -0.37653 0.1874 0.29167 0.045849 -0.0033585 -0.070105 -0.17183 0 -0.0024938 0.21131 -0.0026322 -0.013064 -0.13665 -0.013677 -0.36822 -0.01594 0.012516 -0.022058 -0.54733 -0.0053992 -0.00069303 -0.024935 -0.020138 -0.027241 -0.26418 -0.010922 -0.011198 0.026654 -0.013593 -0.054151 0.0036076 -0.0080709 -0.0016629 -0.010232 -0.013402 -0.01037 -0.017803 -0.017529 -0.0066432 0.0073609 -0.010415 -0.049073 -0.059 -0.06148 -0.0067813 -0.0045695 0.67094 -0.012021 -0.11942 -0.0082594 -0.005261 -0.010508 0.015727 -0.013402 0 0.013986 -0.11848 -0.021218 -0.0071958 0.00051808 -0.018597 -0.79636 0.16025 1.3014 -0.019694 -0.16391 -0.0084385 -0.0019399 -0.021241 -0.0094046 -0.013402 -0.0099565 -0.29945 0.0093098 -0.76214 0.011818 -0.49465 -0.019863 -0.3529 -0.0099006 0.42032 -0.0077482 -0.0089906 0.21442 -0.017529 -0.016704 -0.032723 0.0045555 -0.024965 -0.015741 -0.013433 0.0076392 -0.02323 0.073115 -0.016816 0.59034 -0.036283 -0.11521 0.058081 0.46144 -0.019119 -0.018902 -0.0088526 -0.084327 -0.14703 0.0073609 -0.018628 -0.31844 -0.18081 0.36579 0.062262 0.7549 -0.011887 -0.011711 0.011558 0.091155 0.084948 -0.0027707 -0.0034627 -0.0027707 -0.75707 -0.019589 -0.0087025 0.0093098 0 -0.019314 -0.38839 0.033373 -0.0018055 -0.022469 -0.020705 -0.99304 -0.00055444 -0.042921 -0.0077482 -0.23753 -0.0080244 -0.021107 -0.0065422 0.013632 -0.01037 -0.41979 -0.23141 -0.033789 -0.0028384 -0.012763 0.0063871 -0.29697 -0.010094 -0.0063668 -0.044686 -0.75892 0.021183 0.0063871 0.0081104 -0.34148 0.021603 -0.022553 0 0.015727 -0.0016629 -0.00041585 -0.011105 -0.0016796 0.22653 -0.0051227 -0.46536 0.062508 -0.01167 0.0044611 -0.019177 0.01447 0.0082904 0.0078915 -0.0098815 -0.012102 -0.0011087 -0.48007 -0.005261 -0.003279 -0.0011087 -0.015694 -0.0069195 -0.0042929 -0.014949 -0.0099565 -0.0022168 0.24887 -0.24448 0 -0.0051227 0.060342 -0.0060904 -0.14901 -0.72632 0.031436 -0.21528 -0.0019399 0.84179 -0.0073339 0.020763 -0.17681 -0.0068376 -0.0020784 0.40561 0.018243 -0.021777 0.3471 -0.006505 -0.013815 -0.0063668 -0.1021 -0.85467 -0.0048461 -0.38179 -0.020961 0 -0.15936 -0.31716 -0.0042746 -0.01756 -0.0076101 0.024689 -0.0011087 -0.24833 0.0015937 0.0063871 -0.22342 -0.052126 0.31916 -0.0055375 0.080601 -0.0036011 -0.10289 -0.012358 -0.32948 -0.00097017 -0.029721 -0.24754 -0.016841 -0.027535 -0.0056255 -0.0013858 -0.040616 0.033755 -0.0070576 -0.01037 0.28097 -0.020412 -0.015604 -0.0027707 0.023847 -0.00027724 -0.0065404 -0.041969 -0.017116 -0.0027707 -0.014407 -0.18678 0.0033724 -0.023555 -0.2656 -0.28645 -0.04428 0.0048579 0.35724 -0.00055444 0.76752 -0.13441 -0.15213 -0.025756 -0.021235 -0.0012576 0.32366 -0.1071 0.0091705 -0.021098 -0.014503 -0.0062286 -0.13821 -0.25113 -0.0089906 -0.005734 -0.011346 0.01433 -0.13036 -0.33198 0.33238 -0.010922 -0.081605 0.0084743 0.0069435 0.3923 0.11822 -0.032996 0.010424 0.0015255 -0.31818 -0.0060221 0.099624 0.24024 -0.99493 0.018663 -0.028489 -0.038442 -0.010784 -0.0015243 0.0044411 -0.16434 -0.0069195 -0.43499 -0.0083005 0.11946 -0.22059 -0.00027724 -0.014778 -0.71906 -0.00041585 -0.012162 0.054091 -0.023018 -0.018078 -0.029994 0 0.051672 0.011496 0.0092538 0.00597 0.37117 0.044432 0.65504 -0.019452 0.037373 -0.0084385 -0.0016629 0 -0.096857 -0.033833 0.018243 -0.0057483 0.0068044 -0.029994 -0.00041585 -0.0055375 -0.0091286 -0.028558 0.36526 0.006109 -0.0026322 -0.00055444 -0.0034627 -0.0050246 0.036401 0.10829 -0.0063668 0.0027745 -0.053476 0.021183 -0.083598 0.0087528 0.00040785 -0.010743 -0.0012473 0.0051359 0.019363 -0.21169 0.012097 0.53555 -0.0012473 -0.48693 0 -0.0083005 -0.48428 -0.041295 -0.05752 -0.021647 -0.40506 -0.24608 0.45547 -0.00097017 -0.0013858 -0.86208 -0.0092666 0.0013868 -0.018477 0.28216 -0.47229 -0.0026322 0 -0.031765 -0.00082619 0.0096194 -0.00097017 0.024689 -0.043466 -0.57417 0.61444 0.0049101 0.0051454 -0.0015879 -0.025893 0.011958 0.00055459 0.35578 -0.18609 -0.39969 0.021075 0.00069327 Deletion Peak 23 - CN values 10q21.1 chr10:53057593-53461574(probes 923090:923392) chr10:52739810-54061437(probes 922838:923861) chr10:52828172-53946013(probes 922896:923783) 1.2521e-13 6.7884e-12 Actual Copy Change Given -0.0076101 -0.018353 0.556 -0.38929 -0.20858 0 -0.069064 -0.24418 -0.62665 -0.0073659 -0.087639 -0.02701 -0.014228 -0.16026 -0.039394 -0.019726 -0.16663 -0.26516 0.0022193 0.059651 0 -0.009975 -0.044144 -0.47335 -0.0081624 0.057653 0.0023212 -0.14824 0.0094491 -0.0037395 -0.20903 -0.0053689 -0.0058263 0.019363 -0.0246 -0.0080244 -0.22945 -0.50453 -0.046226 -0.22638 -0.073743 -0.0023553 -0.023977 -0.35248 0.1874 -0.64377 0.045849 -0.0033585 -0.070105 -0.17183 0 -0.0024938 0.21131 -0.0026322 -0.004507 -0.80099 -0.49256 -0.36822 0 0.0075702 -0.023292 -0.53997 -0.0053992 -0.00069303 -0.024935 -0.020138 -0.011967 -0.25835 -0.012383 -0.0029091 -0.8041 -0.0044744 -0.051046 0.0036076 -0.003371 -0.0016629 -0.0084385 -0.013402 -0.01037 -0.017803 -0.017529 -0.0066432 0.049398 -0.010415 -0.03054 -0.059 -0.0415 -0.01193 -0.009013 -0.77462 -0.73687 -0.13436 -0.0082594 -0.005261 -0.00055444 0.016006 -0.013402 -0.019802 0.0051359 -0.11848 -0.021218 -0.0071958 -0.53989 -0.018597 -0.010128 0.10453 -0.024825 -0.0059522 -0.18651 -0.0084385 -0.0019399 -0.010289 -0.0094046 -0.011198 -0.0099565 -0.3071 -0.0027592 -0.75931 -0.0015243 -0.49465 -0.019863 -0.3529 -0.020906 0.44765 -0.0012473 -0.0089906 0.082807 -0.017529 -0.016704 -0.017529 -0.0026566 -0.051335 -0.015741 -0.0091103 0.0056919 -0.02323 0.080601 -0.016816 0.026373 -0.036283 -0.10233 0.0030522 0.46144 -0.019119 -0.018902 0.0020805 -0.084327 -0.11137 0.031718 -0.018628 -0.3186 -0.19487 0.16393 0.062262 -0.26095 -0.011887 -0.004808 0.011558 0.091155 -0.012162 -0.0027707 -0.0034627 -0.0027707 -0.30833 -0.019589 -0.0087025 0 -0.50877 -0.019314 -0.38929 0.033373 -0.0018055 -0.022469 -0.020705 0.013074 -0.074028 -0.042921 -0.0077482 -0.23753 -0.0080244 -0.018216 -0.0065422 -0.030492 -0.0013858 -0.41682 -0.040894 -0.0057936 -0.0028384 -0.0043288 0.0063871 -0.29697 -0.014778 -0.00069303 -0.044686 -0.0094046 0.0033299 0.0041632 0 -0.34148 0.021603 -0.022553 0 0.015727 -0.0016629 -0.94635 -0.011105 0.0015313 0.067232 -0.0051227 -0.46536 0.010393 -0.010567 0.0044611 -0.019177 0.0098364 -1.003 0.030002 -0.80264 -0.023369 -0.0011087 -0.47437 -0.005261 -0.003279 -0.0011087 -0.0030475 -0.0069195 -0.0042929 -0.0035969 -0.46982 -0.0022168 -0.02251 -0.24448 0 -0.0051227 0.060342 -0.0060904 -0.14901 0.034254 -0.010646 -0.21528 -0.0019399 -0.29556 -0.0073339 0.017887 -0.10447 -0.0068376 -0.0020784 0.40561 0.018243 -0.017529 -0.45428 -0.0033243 -0.013815 -0.0063668 -0.089964 -0.14296 -0.0048461 0.050677 -0.020961 0 -0.15936 -0.31716 -0.0042746 -0.01756 -0.0076101 0.006035 -0.0011087 -0.23812 0.0015937 -0.013051 -0.22342 -0.052126 -0.21404 -0.0055375 0.080601 -0.0036011 -0.11691 -0.013337 -0.32948 -0.00097017 -0.0059529 -0.19712 0 -0.027535 -0.0056255 -0.0013858 -0.0095426 0.033755 -0.0070576 -0.01037 0.28097 0.001998 -0.015604 -0.0027707 0.023847 -0.00027724 0.0001031 -0.027119 -0.017116 -0.0027707 -0.0056757 -0.18678 0.0033724 -0.023555 -0.2656 -0.27882 -0.04428 0.0048579 0.3558 -0.00055444 -0.20063 -0.13441 -0.14091 -0.025756 -0.010784 -0.0012576 0.32366 -0.11819 0.0091705 -0.021098 -0.014503 -0.0062286 -0.13821 -0.24781 -0.0089906 -0.005734 -0.0095426 0.016146 -0.13036 -0.33198 0.33238 -0.010922 -0.081605 0.0084743 0.0069435 0.3923 0.0051359 -0.032996 0.010424 0.0015255 -0.30098 0.0021491 0.099624 -0.29028 -1.2929 -0.7402 -0.028489 -0.038442 -0.010784 -0.0015243 0.0044411 -0.16434 -0.0011526 0.079556 -0.011695 0.11946 -0.22059 -0.00027724 -0.014778 -0.1965 -0.00041585 -0.47776 -0.6846 -0.0056757 -0.018078 -0.015587 0 0.047687 0.011496 0.0092538 0.00597 0.37117 0.018757 0.65504 -0.019452 0.036244 -0.010646 -0.0016629 0 -0.096857 -0.033833 0.018243 0.0022193 0.0068044 -0.57318 -0.00041585 -0.65342 -0.0091286 -0.028558 0.36526 0.0055529 -0.39163 0 -0.0034627 -0.0050246 0.036401 0.10829 0.0027745 0.0027745 -0.053476 0.021183 -0.083598 0.0087528 0.00040785 0.00055459 -0.0012473 0.0055529 0 0.00498 0.012097 0.48923 -0.0012473 -0.020887 0 -0.0083005 -0.48428 0.0073609 -0.042788 -0.021647 -0.39797 -0.24608 0.012655 -0.00097017 -0.0013858 -0.85002 -0.0092666 0.0013868 -0.00013862 -0.17714 -0.90008 -0.0026322 0 -0.015701 -0.00082619 0.0096194 -0.00097017 0.024689 -0.052592 -0.57417 -0.62379 0.0079698 0.0051454 0.0075 -0.029546 -0.011811 0.00027728 0.3395 -0.18169 -0.3983 0.0070046 0.00069327 Deletion Peak 24 - CN values 10q23.31 chr10:89313008-90348818(probes 944994:945780) chr10:89574877-89611620(probes 945180:945201) chr10:82660017-135534747(probes 940722:973762) 1.3301e-14 7.0964e-10 Actual Copy Change Given -0.017803 -0.018353 0.556 0.20285 -0.80815 0 -0.069064 -0.21497 -0.62665 -0.0026322 -0.094948 -0.020275 -0.026157 -0.16026 -0.82717 -0.0123 -0.16663 -0.83672 -0.49931 0.059651 0 -0.0078863 -0.084161 -0.009027 -0.0081624 0.057653 0.0015697 -0.14824 0.0094491 -0.0037395 -0.22076 0.0088689 0.0069435 0.019363 -0.0246 -0.0022168 -0.20335 -0.50453 -0.046226 -0.22638 -0.073743 -0.0023553 -0.023977 -0.36793 -0.78579 -0.05442 0.045849 0.0005204 -0.053206 -0.17183 0 -0.0024938 0.00013863 -0.0026322 -0.004507 -0.80721 -0.019177 -0.36426 0.01176 0.0075702 -0.0059522 -0.53997 -0.0053992 -0.00069303 -0.01354 -0.020138 -0.0081624 -0.25835 -0.012383 -0.0036845 0.031295 -0.0044744 -0.14978 0 -0.003371 -0.0016629 -0.0018014 -0.013402 -0.68997 -0.017803 -0.011749 -0.0066432 0.049398 -0.010415 -0.03054 -0.059 -0.0415 -0.010094 0.001803 -0.77214 -0.0025625 -0.12606 -0.0082594 -0.005261 -0.00055444 -0.80236 -0.013402 -0.019802 0.017824 -0.11848 -0.012488 -0.0041546 -0.53989 -0.013578 -0.77829 0.10906 -0.018655 -0.0059522 -0.18651 -0.0084385 -0.0019399 -0.010289 -0.74794 -0.011198 -0.0099565 -0.27989 0.0073609 -0.75223 -0.0015243 -0.49465 -0.0042371 -0.33779 -0.005205 -0.0016629 -0.0012473 -0.0089906 -0.053611 -0.0051227 -0.016704 -0.017529 -0.00071747 -0.020138 -0.0092666 0.00013863 0.015447 -0.24138 0.080601 0.011565 0.026373 -0.036283 -0.095384 0.0030522 -0.50525 -0.019119 -0.018902 0.0020805 -0.088307 -0.11137 -0.69405 0.021884 -0.30545 -0.19487 0.16393 0.0010382 -0.26095 0.0016642 -0.004808 0.011558 0.091155 0 -0.0027707 -0.0034627 -0.0027707 -1.2929 -0.0087146 0.0086135 0 0.039065 -0.019314 -0.38929 0.035206 0.005794 -0.022469 0.009291 0.013074 0.12064 0.0015286 -0.0077482 -0.35544 -0.00013862 -0.018216 -0.0065422 -0.0080244 -0.0029091 -0.41146 -0.040894 0.0029133 0.014114 -0.0019846 -0.0092666 -0.29697 -0.0023553 0.023498 -0.044686 -0.0094046 0.0033299 0.0041632 0 -0.34148 0.043865 -0.012359 0 0.0087528 -0.0016629 0.002385 0.65075 0.0076392 -0.73617 0.004719 -0.46536 0.010393 -0.0068187 0.0044611 -0.019177 0.0098364 -1.2929 0.0070299 0.001046 -0.023369 -0.0011087 -0.47437 -0.005261 -0.003279 0.0077524 -0.0030475 -0.0069195 -0.0042929 0.001803 0.010842 -0.0022168 -0.02251 -0.2435 0.008397 -0.0051227 0.060342 -0.0060904 -0.15451 -1.2929 0.0033299 -0.21528 -0.0019399 -0.21651 -0.0073339 0.017887 0.038065 -0.0068376 0.013911 -1.0711 -0.38474 -0.017529 -0.020856 -0.0033243 -0.013815 -0.0063668 -0.089964 -0.15777 -0.0048461 0.050677 -0.011198 0 -0.15579 -0.31716 0.00458 -0.01756 -0.0076101 0.0012565 -0.0011087 -0.23812 0.0015937 0.015308 -0.22342 -0.032496 -0.19487 -0.0055375 0.10205 -0.0036011 -0.1203 0.00049603 -0.33158 -0.00097017 -0.0059529 -0.19712 0 -0.027535 0 -0.0013858 -0.0095426 0.033755 -0.0070576 -0.0091286 0.29565 0.001998 0.0092661 -0.0027707 0.023847 -0.00027724 0.0001031 -0.020819 -0.017116 -0.0027707 -0.0056757 -0.17677 0.0065262 -0.023555 -0.2656 -0.27882 -0.04428 -0.53144 0.3558 -0.00055444 -0.20063 -0.13441 -0.14091 -0.025756 -0.010784 -0.0012576 0 -0.12361 0.0091705 -0.021098 -0.014503 -0.0045695 -0.13821 -0.24781 -0.0089906 -0.0077482 0.0013868 -0.95254 -0.11208 -0.32959 0.23442 -0.21478 -0.080674 0.0084743 0.0023581 -0.44889 -0.031768 -0.032996 0.010424 0.0015255 -0.29346 -0.83426 0.099624 -0.29028 0.019083 -0.74264 -0.0033243 -0.018216 -0.44631 -0.0015243 0.0044411 -0.16434 -0.0011526 -0.42104 -0.011695 0.11946 -0.22059 -0.00027724 -0.014778 -0.1965 -0.00041585 0.00266 0.07536 -0.0056757 -0.018078 0.010982 0 -1.2929 0.011496 0.0092538 -0.10026 0.20901 -1.2929 0.72094 -0.013402 0.034974 0.0033299 -0.0016629 0 -0.65259 -0.033833 0.018243 0.0022193 0.0068044 -0.016154 -0.00041585 -0.00055444 -0.0091286 -0.0085766 -0.027124 -0.019726 -0.51989 0 -0.0023553 -0.0050246 0.036401 0.094413 0.0027745 0.0027745 -0.13742 -0.73617 0.028481 0.0087528 0.0054139 0.00055459 -0.0012473 0.0055529 0.034935 -0.063703 0.012097 0.99841 -0.0012473 -0.0039875 0 -0.0083005 -0.48428 0.0073609 -0.042788 -0.018765 -0.007472 -0.5201 -0.33821 -0.00097017 -0.0013858 -1.2929 -0.54744 0.0013868 -0.00013862 -0.0696 -0.45747 -0.0026322 0 -0.0018995 0.004552 0.0037583 -0.00097017 0.024689 -0.052592 -0.57615 -0.62379 0.022357 0.0051454 -0.98723 -0.0123 -0.011811 0.00027728 0.32398 -0.18169 -0.3983 0.018103 0.00069327 Deletion Peak 25 - CN values 10q25.2 chr10:94837472-135534747(probes 948342:973762) chr10:114706629-114933610(probes 960510:960640) chr10:82660017-135534747(probes 940722:973762) 9.4741e-07 0.056768 Actual Copy Change Given -0.7139 -0.018353 0.556 0.20285 -0.16654 0 -0.069064 -0.22293 -0.62665 -0.0026322 -0.074144 -0.0080244 0.022865 -0.16026 -0.82611 -0.0123 -0.16663 -0.11443 0.018803 0.059651 0 -0.0078863 -0.084161 -0.009027 -0.0081624 -0.0010067 0.011737 -0.14824 0.0094491 -0.0037395 -0.23554 0.0088689 0.0069435 0.019363 -0.0246 0.001803 -0.20335 -0.50453 -0.046226 -0.56684 -0.073743 -0.0023553 -0.023977 -0.36793 -0.054127 -0.56823 0.045849 0.0005204 -0.053206 -0.17183 0 -0.0024938 0.00013863 -0.0026322 -0.004507 -0.8098 -0.51085 -0.36374 -0.54637 0.0075702 -0.0059522 -0.53997 -0.0053992 -0.00097017 -0.01354 -0.020138 -0.0081624 -0.25835 -0.012383 -0.0036845 0.031295 0.011904 -0.22236 0 -0.003371 -0.4421 -0.0018014 -0.013402 -0.013402 -0.017803 0.011958 -0.0066432 0.049398 -0.32627 -0.03054 -0.059 -0.0415 -0.010094 -0.007184 -0.77214 0.0059733 -0.13564 -0.0097658 -0.005261 -0.00055444 0.022304 -0.013402 -0.019802 0.017824 -0.11848 -0.0027707 -0.0041546 -0.53989 0.0026357 0 -0.46706 -0.018655 0.039478 -0.19899 -0.0067813 -0.0019399 -0.010289 -0.74794 -0.011198 -0.0099565 -0.27989 0.0073609 -0.75223 -0.0015243 -0.49465 -0.85955 -0.33952 -0.005205 -0.0016629 -0.0012473 -0.0089906 -0.10066 -0.0051227 -0.016704 -0.56256 -0.00071747 -0.028346 -0.0092666 0.00013863 0.015447 -0.2574 0.12255 0.01296 0.026373 -0.048631 -0.075745 0.034818 -0.53236 -0.0087944 -0.018902 0.0020805 -0.12609 -0.095067 0.026654 0.017824 -0.30545 -0.16166 0.15879 0.0010382 -0.26095 -0.013264 -0.004808 0.011558 0.091155 0 -0.0027707 -0.0034627 -0.0027707 -0.73341 -0.0083005 -0.0025886 0 0.012143 -0.035993 -0.38929 0.027794 0.014293 -0.022469 0.009291 0.013074 0.12064 -0.0042887 -0.0077482 -1.1309 -0.00013862 -0.018216 -0.005261 -0.0080244 -0.0029091 -0.41308 -0.040894 0.0029133 -0.0021541 -0.0019846 -0.017839 -0.29697 -0.0023553 0.04429 -0.044686 -0.017666 0.0033299 0.0041632 -0.022965 -0.34148 0.043865 0.0066653 0 0.0087528 -0.0016629 0.028481 0.65369 0.0076392 -0.31143 0.004719 -0.46536 0.010393 -0.0068187 -0.77498 -0.019177 0.0098364 0.07484 0.0070299 0.001046 -0.86173 -0.0011087 -0.47437 0.0063871 -0.003279 0.0077524 -0.0030475 -0.0069195 0.0052749 0.001803 0.0065381 -0.0022168 -0.02251 -0.2435 -0.0050672 -0.0051227 -0.70253 -0.0060904 -0.15451 0.033267 0.0033299 -0.21528 -0.0019399 -0.21651 -0.0042929 0.017887 0.038065 0.057939 -0.00089824 0.40344 -0.37921 -0.017529 -0.02442 -0.0073533 -0.013815 -0.0063668 -0.089964 -0.12387 -0.0048461 0.49199 -0.011198 0 -0.15579 -0.31716 0.00458 -0.01756 -0.0076101 -0.013926 -0.0011087 -0.23812 0.010424 0.015308 -0.22342 -0.0056757 0.37509 -0.0016629 0.10205 -0.0036011 -0.1203 -0.0029676 -0.33158 -0.00097017 0.00027728 -0.19712 0 -0.027535 0 -0.0013858 -0.0095426 0.033755 -0.0070576 -0.0091286 0.29565 0.001998 0.0092661 -0.0027707 -1.0405 -0.00027724 0.0001031 -0.020819 -0.017116 -0.4889 -0.0056757 -0.17677 0.0065262 -0.023555 -0.2656 -0.27882 0.77368 0.015866 0.37019 -0.00055444 -0.20063 -0.13441 -0.14091 -0.025756 -0.010784 -0.0012576 -0.019165 -0.12361 0.0091705 -0.021098 -0.014503 -0.0045695 -0.13821 -0.25036 -0.0089906 -0.0077482 0.0013868 0.033445 -0.12213 -0.32959 0.23442 -0.21478 -0.066788 0.0084743 0.0023581 0.41028 -0.031768 -0.03054 0.010424 0.0015255 -0.29346 0.0065949 0.099624 -0.29028 0.026062 -0.74028 0.00083195 -0.018216 -0.0026322 -0.0087897 0.0044411 -0.17094 -0.0011526 -0.42104 0.0114 0.11946 -0.22059 -0.00027724 -0.014778 -0.1965 -0.00041585 0.0032602 0.082188 -0.0045695 -0.018078 0.0075509 0.011121 0.097833 0.011496 0.0092538 -0.10026 0.20901 -0.78069 0.73682 -0.013402 -0.90585 0.0033299 -0.0016629 0 -0.40243 -0.01787 0.011261 0.0022193 0.0068044 -0.59283 -0.00041585 0.0037465 -0.0091286 -0.0085766 -0.027124 -0.019726 -0.57427 0 -0.0023553 -0.0050246 0.04248 0.10173 0.0018946 0.0027745 -0.13742 -0.73617 0.028481 0.0087528 0.0054139 0.00055459 -0.0012473 0.0055529 0.012655 -0.063703 0.012097 0.99841 -0.0012473 -0.0039875 0 -0.0083005 -0.48428 0.0073609 -0.042788 -0.018765 0.010703 -0.24472 -0.32356 -0.00097017 -0.0013858 -0.83873 -0.0034627 0.0013868 0.0040243 -0.19024 -0.45747 -0.0026322 0 -0.0018995 0.015593 0.0062641 -0.00097017 0.024689 -0.028973 -0.57615 -0.62379 0.022357 0.031295 0.0027745 -0.0123 -0.011811 0.00027728 0.32125 -0.14901 -0.3983 0.043157 0.00069327 Deletion Peak 26 - CN values 12p13.2 chr12:6885077-18235892(probes 1054268:1060354) chr12:10158904-10242160(probes 1055563:1055609) chr12:10164843-10169939(probes 1055567:1055568) 0.087189 0.085979 Actual Copy Change Given 0.31223 -0.58588 0.55264 -0.035585 0 0.0044411 0.032986 -0.072432 -0.1779 0.0055529 0.015308 -0.018078 0.018523 -0.91409 -0.0034627 0.26577 -0.039529 -0.45426 0.1492 0.018555 0.0024969 -0.0027707 0.31901 -0.44484 0.54224 -0.30616 0.4307 0.077718 -0.0029091 -0.0023553 -0.13949 -0.050107 0.0040243 0.05523 0.42603 0.0015255 -0.0078863 -0.014916 -0.026714 0.025952 -0.027945 0.0062481 0.13791 -0.010508 0.013656 0.48045 0.076422 -0.80627 0.00083195 0.025222 0.63827 0.0055529 -0.10079 0.0022193 0.41236 -0.16154 -0.0048461 -0.34021 -0.0054566 -0.016841 0.0051359 0.39878 0 0.0062481 0.062508 0.7042 -0.0011087 -0.070726 0.0012481 0.008892 0.010424 0.003971 0.019938 0.0058309 1.0765 0.015447 0.013772 0.0012481 0.0052749 -0.0038779 0.53854 0.00458 0.0012481 0.12199 0.68928 -0.23361 0.53578 0.0076392 -0.0012473 -0.32861 0.011682 -0.14698 -0.0093635 0.0026357 -0.0018034 -0.034045 0.039619 0.10979 0.00597 -0.024114 0.012934 -0.75917 -0.005349 0.0027745 0.0076392 -0.46653 -0.011638 0.57434 -0.14819 -0.0045695 0.0095883 -0.019963 0.67771 0.49424 0 0.69447 -0.79511 0.017333 0.030591 0.020483 0.7593 0 0.49517 0.46024 0.0052749 0.64341 -0.094592 0.38089 0.47135 0.70964 -0.0069438 -0.01037 0.0052749 -0.0037395 0.011539 0.03714 0.12889 0.84045 0.59768 -0.014659 0.070099 -0.0044312 0.49338 0.57298 -0.070135 0.022304 -0.012058 -0.10337 0.031859 0.0019418 -0.3031 -0.16764 -0.065418 0.0096265 0.049114 -0.0011087 -0.0010705 0.029344 0.81884 0.25482 0.0064358 0.2087 0.42519 -0.70033 0.00069327 -0.0083005 0.08392 0.042884 0 -0.36022 0 0 0.0066653 0.011242 -0.074678 -0.018216 0.67441 -0.0027707 0.015727 0.0070826 0.0058309 0.011679 0.022865 0.0097276 0.0020805 0.017963 0.87707 0.00089481 0.051905 0.00041593 0.094927 -0.0040162 0.013772 0.013213 0.018243 0.0081959 0 -0.0087994 -0.0023553 -0.66328 0.8033 0.60196 0.017963 0.0013868 0.017264 0.013632 0.0043021 -0.30745 0.00027728 0.0079175 0.030591 0.71294 -0.002178 0.86712 -0.35339 0.031155 0.0027486 0.0067409 0.81154 0.82764 0.089852 0.78678 0.062698 0.14295 0.50724 0.0037465 -0.0024938 0.001803 0.0069613 0.0072217 -0.10447 -0.15298 0.4983 0.0020805 -0.023292 0.0076392 -0.14361 -0.0089906 0.54647 0.097979 0.0048579 -0.11521 -0.0051227 0 0.19959 0.015587 0.0041632 -0.075345 0.029888 -0.032771 0.39409 0.00055459 -0.0031859 -0.0015243 0.13806 -0.017673 0.065656 0.23194 -0.0083005 -0.0056757 0.025671 -0.014424 0.027778 0.8177 0.16505 0.036383 0.0036076 0.029487 0.012795 -0.77787 0.63719 0.5788 -0.036946 0.25261 -0.3463 -0.0043517 0.00023173 -0.84455 -0.027261 0 0.00458 -0.036129 -0.00013862 0.30489 0.45981 0.0056919 0.7425 -0.35585 0.6403 -0.0042929 0.29024 0.0023581 0.017684 0.0034687 0.036653 0.0015255 -0.0039863 0.78578 -0.010508 0.016425 -0.0056757 -0.1701 0.00013863 -0.053736 -0.00049957 0.032422 0.00041593 0.5135 0.34502 -0.0016629 -0.202 0.10556 0.4895 -0.024935 -0.0024938 0.0019314 -0.2217 -0.10985 -0.01409 0.60611 0.0094491 0.0020805 0.12431 -0.25133 0.74537 -0.74325 0.0072217 -0.0239 0.054233 -0.35533 0.36559 -0.46398 -0.079343 -0.0060904 0.0097276 -0.025756 0.013911 0.012934 0.86473 0.0073609 0.52136 0.0027043 -0.23006 -0.0041778 -0.41509 0.0022859 0.73663 -0.013127 0.0026357 0.0058309 -0.0024938 -0.39018 0.0073609 0.00024333 -0.0071958 0.11448 -0.026304 0.00597 0.25683 -0.22022 0.0044411 0.43142 -0.25455 0.56845 0.71382 0.657 0.0033299 0 0.0040243 0.046417 -0.67512 -0.31143 0.016985 -0.067993 0.65461 -0.0078602 0.0026357 -0.00027724 0.00597 -0.044916 -0.04299 0.0026357 -0.0027707 0.0080567 -0.0059522 0.07096 0.017684 0.00055459 0.40911 1.0203 -0.20124 -0.57002 -0.0030475 0.0020805 0.0043021 0.12789 0.014157 -0.044822 0.0066653 -0.24472 0.015028 0.034959 0.0020805 -0.0008316 0.0020805 -0.0044312 -0.017051 0.00458 0.0098669 0.010424 -0.026791 0.0037465 -0.11273 0.0068044 0.65222 0.065761 0.010006 -0.047531 0.0012698 0.34808 -0.23618 -0.33779 0.0048579 0.0068044 0.0075 0.30985 0.010146 0.0062481 -0.030618 -0.025483 0.12219 0.0020805 -0.023252 -0.51169 0 0.0055529 -0.0031859 0.30761 -0.0061299 -0.62331 0.0079698 0.028734 -0.061823 -0.032041 0.077286 0.0015255 -0.61343 -0.17289 -0.38448 0.034395 0.0040243 Deletion Peak 27 - CN values 13q14.13 chr13:34674944-71590578(probes 1133346:1153220) chr13:46524840-46627479(probes 1141006:1141046) chr13:46288869-46594021(probes 1140817:1141033) 0.24773 0.24516 Actual Copy Change Given 0.34261 0.82373 1.0859 0.067948 1.3581 0.28726 0.041741 1.2879 1.0319 0.89989 0.80539 0.37166 -0.010922 0.025812 0.12594 0.7528 1.6419 0.86136 0.25548 0.79103 0.018346 -0.35179 -0.01354 1.7468 -0.01037 2.48 0.1398 0.67816 1.044 0.040609 0.63627 1.3129 0.41346 2.5065 -0.046583 -0.00653 0.76236 0.4321 0.39031 1.0504 0.70046 0.00055459 1.3399 0.53889 0.29043 2.2531 0.31274 1.3357 0.0049969 0.44654 -0.0088526 -0.00013862 1.4629 0 -0.0090979 1.1134 0.93162 2.8851 1.4993 0.27916 0.0024969 0.050819 0.44729 0.67289 0.00041593 0.6508 0.001803 1.041 -0.0068264 -0.0008316 1.5308 0.0083943 0.38457 0.67548 2.7765 0.023847 -0.79545 0.0020805 -0.0019399 0.6954 -0.020961 0.0051359 1.0814 0.90749 0.67678 0.75356 1.6761 0.99011 1.5605 -0.77324 2.3542 0.27312 0.47947 -0.0022168 0 -0.23429 1.0344 0.25326 1.9704 1.0319 0.073402 0.64066 1.6002 -0.0047079 -0.79394 1.7096 1.3911 -0.0053992 0.32533 0 -0.001435 1.8687 0.0048579 1.3055 0.17875 0.69521 0.85363 0.021963 1.4243 0.26066 -0.0040162 1.0464 -0.010452 0.42121 -0.0037395 0.14176 0.63098 0.77252 1.3954 0.72476 -0.0079106 -0.016154 -0.0045695 0 0.0058309 1.3192 0.69381 0.82807 -0.012163 1.3322 0.20259 0.0033997 -0.027189 -0.0074137 -0.0095426 0.81659 0.38246 0.65966 0.056655 -0.0048461 0.31161 1.4882 0.59426 0.60887 0.96555 -0.41827 -0.0099184 0.74943 0.85047 1.0066 0.020203 0.24031 -0.017391 -0.020623 0.97546 0.56199 -0.0015243 -0.53377 0.53169 2.667 1.8373 3.3224 1.0057 0.0013681 0 0.25449 -0.031356 0.59314 0.66722 0.6818 0.3206 -0.01037 1.4245 -0.0011087 2.0538 0.052099 -0.017575 2.0473 -0.0015743 0.057653 0.62843 -0.022469 0.0079175 1.0477 0 0 1.2294 0.92075 1.1903 1.5876 1.1593 0.60278 0.018243 -0.0037395 -0.0033087 0.011679 -0.012989 0.47272 -0.0065898 0 -0.012851 0.051184 -0.0034627 0.0058309 1.4136 0.99654 1.1685 -0.024861 0.010067 0.062794 0.64048 0.78446 0.046889 0.59116 -0.01889 0.1317 -0.026441 -0.0033243 0.19778 -0.0053992 0.59027 1.0898 0.77376 -0.0030475 0.78687 -0.0087146 0.60826 -0.006505 -0.010646 0.38551 -0.027261 0.54206 1.0243 0.59332 -0.14862 0.7982 -0.012024 0.38466 0.01419 0.013353 1.4853 1.4467 0.48135 -0.74046 0.27237 0 -0.011887 0.19147 -0.88062 1.4822 0.55673 0.61705 0.039012 0.57401 0.0023581 0.66715 -0.0089906 1.1232 0.90835 2.5634 -0.41014 1.1742 0.22947 0.17332 0.09188 -0.0078863 -0.41564 0.75807 0.027076 -0.0008316 -0.01106 0.44274 1.2335 0.40361 0.00076727 -0.0029091 -0.016704 1.1034 -0.015191 1.4491 -1.2929 -0.0038636 -0.012089 0.026092 1.6238 -0.011335 0.0072113 0.49386 0.077142 0.047731 0.015866 0.51839 -0.023703 1.3203 0.37535 0.61189 0.5649 0.30702 1.1327 -0.0049844 2.471 -0.0157 1.2793 0.71453 0.49735 -0.010267 0.92545 0.41647 0.92411 -0.019314 0.28048 0.55726 0.54876 0.79385 0.00069327 0.73173 -0.0018014 -0.95486 0.30761 0.62879 1.1562 0.8015 0.0083351 -0.0049844 0.71536 1.2522 0.82118 0.69914 0.027076 -0.00069303 0.6063 1.4635 1.1879 1.066 0.53977 0.6766 0.72697 1.5635 0.33772 -0.010508 0.070817 0.42116 0.0024969 0.62462 0.37282 0.31466 0.4669 -0.0044312 0.02806 0.4789 -0.010232 0.42688 1.968 0.54773 0.674 -0.0016629 -0.0098185 1.7383 0.71208 0.12472 0.37168 -0.95261 -0.0070576 1.4123 0.024268 1.5883 0.00013863 0.36117 -0.0060904 1.1168 0.58175 0.61665 0.0043021 2.0192 0.57934 0.061937 -0.012024 0.078727 -0.033525 -0.0076101 1.4288 -0.62087 0.008892 -0.0042929 0.7951 0.025561 -0.15422 -0.00013862 0.3056 0.51507 0.39944 0.51751 0.55779 0.44054 0.0022193 1.0827 2.4529 0.45241 1.7693 0.48045 0.95161 -0.0030475 0.86235 -0.0020784 1.4111 -0.035312 -0.0078592 1.4699 0.33052 1.0642 0.057368 0.19451 0.83294 0.0041632 0.02511 0.0011093 0.58908 -0.00055444 0.39181 -0.19036 0.24981 -0.016704 1.5089 0.025893 0.6769 0 0.041458 1.9682 -0.01409 0.8703 0.66722 0.7911 0.3473 0.90875 1.5652 -0.0049844 1.6829 -0.16497 0.81806 0.7862 -0.0041546 Deletion Peak 28 - CN values 14q31.1 chr14:58447798-107349540(probes 1200791:1229478) chr14:80940241-81428563(probes 1214479:1214760) chr14:81089876-81272421(probes 1214576:1214677) 0.050084 0.050533 Actual Copy Change Given -0.011611 -1.2929 -0.012591 -0.029805 -0.80996 -0.0080244 -0.54047 -0.41548 -0.62817 0.018803 0.23365 -0.018765 -0.0037395 -0.016979 -0.83344 -0.035585 -0.43138 -0.46925 0.022024 -0.38775 -0.037626 0 0.18121 -0.44051 -0.011887 -0.3668 -0.34001 -0.22256 -0.80377 -0.0008316 -0.15541 -0.04103 -0.00041585 -0.8947 -0.0026322 0.0041632 0.0054139 0.13243 0.00458 -0.56684 -0.7089 0.0015255 -0.3764 0.52993 -0.18179 -0.60012 -0.18748 -0.83103 0.00083195 -0.18559 0.035018 -0.017125 -0.57071 0.0029133 0.0093727 -0.7977 0.001803 0.01447 -0.57575 0.0027745 -0.0095426 0.012655 -0.0047079 -0.0033243 -0.0078863 -0.0030475 -0.0071958 -0.60617 -0.011335 -0.0019399 -0.37538 -0.0082155 -0.80659 -0.6993 -0.51726 0.015866 -0.013127 -0.010094 -0.68314 -0.007472 -0.0042929 -0.50194 -0.57031 -0.0019851 -0.030676 0.17407 -0.695 -0.0011087 0 -0.02528 -0.01835 -0.13965 0.007771 -0.0040162 0.0026357 -0.22034 0.28327 -0.069507 -0.47438 -0.53911 0.0033299 0.40294 0.0053801 -0.0019399 -0.005814 -0.51692 -0.80436 -0.00013862 -0.10153 -0.0049844 -0.57595 -0.77196 -0.010081 -0.016076 -0.0095426 -0.30293 -0.79686 0.032795 -0.85742 0.010118 -0.026851 -0.67315 -0.0082446 -0.47512 -0.005814 -0.0044312 -0.37673 -0.0034627 -0.022469 -0.021921 -0.6984 -0.024661 -0.0038779 0 0.010424 -0.48655 -0.15324 -0.026266 -0.011335 -0.51878 0.050961 0.0093098 0.46724 0.57142 -0.0029091 0.0028828 -0.0075395 -0.036347 -0.71729 -0.0029933 -0.17284 -0.24764 0.011012 -0.027224 -0.10224 -0.25201 -0.022203 -0.63612 -0.29343 0.3643 0.0036076 -0.013881 0 -0.70583 -0.022968 0.0068194 0.10074 -0.51475 -0.57704 -0.88727 0.02704 -0.82628 -0.57021 -0.029793 -0.9924 -0.01409 -0.026781 0.0021 -0.36442 -0.012713 -0.03823 -0.0099565 0.39297 -0.015958 0.029568 -0.0092666 0.00041593 -0.94748 0.027868 -0.69126 -0.51331 0.010564 0.020343 -0.92518 -0.47765 0.0040243 -0.62655 -0.0027173 0.32173 -0.69599 -0.0244 -0.014916 -0.57467 -0.0036011 0.0020805 -0.010784 -0.017706 -0.74621 0 -0.4694 0.010424 0.0050762 -0.018029 0.006109 -0.79444 0.010703 -0.54846 -0.0074035 0.7195 -0.024481 0.063528 -0.0038779 -0.0045242 -0.38862 -0.0036011 -0.010727 -0.0060904 0.0095883 0.18102 -0.010006 -0.13768 -0.25648 -0.29787 0 0.10964 -0.0034627 -0.14592 0 0.001803 -0.87215 -0.0042929 0.0012481 -0.45404 -0.66189 -0.23439 0.0034673 0.0015552 -0.069653 -0.39642 -0.0041546 -0.47455 -0.66901 -0.018766 0.0033299 -0.10263 -0.20378 0.020461 0.034113 -0.0078863 -0.23214 0.052668 -0.015787 -0.0041546 -0.0031644 -0.00097017 -0.053881 0.00083195 -0.69114 -0.21898 0 0.13524 -0.61662 0.15338 -0.26276 -0.3543 -0.00041585 0.0081959 -0.87786 -0.33225 -0.0019399 -0.0066432 0.26145 -0.0015243 0.0083351 -0.0056222 0.0047886 -0.018078 -0.80902 -0.0046402 -0.031905 0.29183 0.0012481 -0.011788 -0.0026322 -0.47765 -0.0037395 -0.0083359 -0.012984 -0.013032 -0.47944 0.00055459 -0.16536 -0.6367 -0.0071854 0.077055 0.013911 -0.021933 0.004501 -0.046448 -0.0048737 0 0.065271 0.26043 -0.39786 -0.0040162 -0.0033346 -0.38448 -0.22108 -0.0008316 -0.04726 -0.021819 -0.0058586 -0.1364 -0.58808 -0.0012473 -0.02787 -0.0019399 -0.97991 -0.16472 0.023847 0.26938 -0.47035 -0.081206 -0.46727 -0.65761 0.37545 -0.73967 -0.023018 -0.0077482 0.00069327 -0.021921 -0.83313 -0.68723 0.010085 -0.4748 -0.0078863 -0.016704 0.56863 -0.013677 -0.009223 -0.0029091 -0.067458 -0.00027724 0 0.0013868 -0.3511 0.030029 -0.0015243 -0.013953 -0.22236 -0.0040162 0.0065262 -0.64048 -0.0045695 -0.011749 -0.014366 -0.59997 -0.0079308 0.01433 0.049966 -0.10074 0.010982 -0.43279 -0.10845 -0.015741 -0.88726 0.0015255 0.0058309 -0.0029091 0.15305 -0.55241 0 0.0034687 -0.86562 -0.61326 0 -0.023018 -0.005814 0.42183 -0.017941 -0.35624 -0.00041585 0.00041593 0.00093894 0.0065262 -0.0685 0.38415 0.00097064 -0.3011 0.0024969 -0.20099 -0.52716 -0.5898 0.0056919 -0.005814 0.004719 -0.020687 -0.45029 -0.21852 0.0016642 -0.028628 0.00097064 0.0034687 -0.00041585 0.00597 0.69391 -0.0015243 -0.051451 -0.019589 -0.010646 -0.2595 0.097542 -0.0040162 -0.0017657 0.012537 -0.00013862 -0.0008316 0.00083195 -0.26504 0.72168 0.13288 -0.018216 -0.4296 0.048091 -0.66094 -0.0012473 0.01195 -0.67343 0.52171 -0.63475 -0.65609 0.014749 0.47838 -0.0012473 -0.010508 0.0049969 -0.094856 -0.1794 -0.75564 -0.80638 0.00013863 Deletion Peak 29 - CN values 15q11.2 chr15:1-40245778(probes 1229479:1237668) chr15:25576904-25691367(probes 1230350:1230394) chr15:1-48091682(probes 1229479:1241613) 1.0065e-06 0.026776 Actual Copy Change Given 0.29931 -0.84299 0.009991 -0.52542 -0.17549 0.0041632 -0.050506 -0.65552 0.31274 -0.0055375 -0.22084 -0.36895 -0.096089 -0.73048 -0.82782 -0.39429 -0.00097017 -0.43983 0 -0.50099 -0.01409 -0.0069195 0 -0.42923 -0.014916 -0.33676 0.0014712 -0.42101 -0.80302 0.0087528 -0.22871 -0.51167 0.0030522 0.052668 0.001803 -0.0049795 0.023706 -0.25092 0.010285 -0.55067 -0.00013862 -0.0021179 -0.37887 -0.014778 0.33273 -0.54613 -0.187 0.0004348 -0.022332 0.013492 -0.63036 -0.0019399 -0.39922 -0.00027724 0.0081196 -0.78437 -1.0308 -0.038578 -1.1946 -0.27655 -0.014778 -0.54219 0.0097276 0.0036076 -0.039122 -0.056607 -0.018765 -0.60394 -0.014503 -0.0029091 0.041741 -0.028271 0.0076392 0.038489 -0.008781 -0.42757 0.013074 -0.0044312 -0.0063373 -0.020687 -0.0123 0.00027728 -0.042859 -0.33102 0.71716 0.058081 -0.67984 -0.030333 -0.80922 -0.77324 -0.71889 -0.48517 -0.47966 -0.0029091 0.0016642 -0.24204 -0.010922 -0.7287 0.04429 -0.12291 -0.0053992 0.011121 -0.074846 -0.0066432 -0.0034392 -0.49788 -0.027835 -0.046127 -0.69892 -0.0081624 -0.57822 0.023789 0 0.0015427 0.29183 -0.25938 -0.32774 -0.26231 -0.73143 -0.47342 0.010703 -0.53806 -0.055199 -0.53865 0.00597 0.0026357 -0.068261 0.0058309 -0.007472 -0.027671 0.013607 -0.10038 -0.016841 -0.0056757 -0.36147 -0.56688 -0.4786 -0.051396 -0.013815 -0.55248 -0.64355 0.029783 -0.080541 -0.012104 -0.39074 -0.018628 -0.45656 -0.12559 0.03031 0.0114 -0.2939 -0.2595 -0.54832 -0.67341 -0.35358 -0.052396 -0.0032862 0.042185 -0.29552 0.22763 0.021323 0.014442 0.022585 0.067727 -0.093931 0.0034687 -0.2435 -0.58028 0.013632 -0.5897 -0.92458 -0.84773 -0.28623 0.015339 -0.95645 -0.31572 -0.086066 -0.0023553 0.018243 0 0.010982 0.00055459 -0.60487 0.015447 -0.39554 0.028763 0.003191 0.021807 -0.0043428 -0.020687 -0.26396 0.013074 -0.88 -0.38448 -0.0053992 0.0041632 -0.60593 -0.42239 -0.065999 -0.69913 -0.015466 0.0076392 -0.26576 0.0058309 0.031014 -0.016857 0.0068044 -0.73003 0.0030522 -0.46323 0.017824 -0.75723 0.00083195 -0.038442 -0.41084 0.05637 -0.02674 0.013568 -0.021385 0.0079175 -0.45918 0.0047358 0.0030977 0.025531 0 -0.078077 0.0080522 0.0027745 0.0083351 -0.005261 -0.31574 -0.23704 -0.29042 -0.0033243 -0.034086 0.001803 -0.13051 -0.73266 -0.0087146 -0.24946 0.0076392 -0.44261 -0.60873 -0.63244 0.64689 0.015308 0.01447 -0.078144 -0.37414 -0.022469 -0.51035 0.0080567 -0.025268 -0.0055375 0.010424 0.19978 0.032422 -0.027945 -0.67177 0.0080567 -0.52542 -0.30827 -0.2196 0.0089137 -0.0034627 0.031999 -0.0066432 -0.24093 -0.20672 0.025531 -0.35501 -0.0062286 0.13273 -0.0042929 -0.39208 0.00069327 0.00058035 0.016366 -0.31377 0.0016642 0.00013863 -0.46547 0.010842 -0.1609 -0.0045695 0.011121 -0.045086 -0.1738 0.0033299 0.0029133 -0.29445 0.0062481 -0.0061797 -0.0024938 -0.46217 0.00013863 -0.003083 -0.075679 -0.024524 -0.49222 -0.015329 0.035267 -0.46387 -0.30744 -0.90507 0.052099 -0.071071 0.018943 -0.034904 0.0011093 -0.20586 0.026556 -0.13858 -0.3856 0.53749 -0.00028756 -0.38616 -0.14824 -0.74156 -0.05186 -0.019314 0.0093098 0.021875 -0.65601 0.0016642 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0.0048984 -0.30461 -0.67607 0.0084743 0.034754 -0.015054 -0.56336 0 -0.017065 -0.051383 -0.53154 0.0011093 0.10278 0.0073609 -0.57654 -0.65557 0.057368 -0.78471 -0.0061257 Deletion Peak 30 - CN values 15q15.2 chr15:37383162-44164004(probes 1235730:1239430) chr15:42825889-42850446(probes 1238930:1238935) chr15:1-48091682(probes 1229479:1241613) 2.3878e-07 0.017793 Actual Copy Change Given -0.38593 -0.83041 0.009991 -0.52542 -0.17549 0.0041632 -0.050506 -0.65552 -0.60719 -0.0055375 -0.22084 -0.36895 0.011121 -0.70457 -0.82782 -0.37966 -0.00097017 -0.43983 0 -0.48428 -0.01409 -0.0069195 0 -0.42923 -0.014916 -0.33676 0.020586 -0.42101 -0.78437 0.0087528 -0.61278 -0.51167 0.0030522 0.052668 0.001803 0.049824 0.023706 -0.25092 0.010285 -0.55067 -0.00013862 -0.0021179 -0.29331 -0.014778 0.33273 -0.54613 -0.187 0.0004348 0.00027728 0.013492 -0.63036 -0.0019399 -0.31482 -0.00027724 0.0081196 -0.78437 -1.0377 -0.006505 -0.53067 -0.27655 -0.014778 -0.54663 0.0043029 0.0036076 -0.007472 -0.021098 -0.018765 -0.60394 -0.014503 -0.0029091 0.041741 -0.0078012 -0.36691 0.038489 0.013445 -0.42757 0.013074 -0.0044312 -0.0063373 -0.020687 -0.0123 0.00027728 -0.024251 -0.037262 0.71716 0.058081 -0.67984 -0.0033721 -0.75365 -0.76873 -0.71889 -0.44396 -0.44993 -0.0029091 0.0016642 -0.24204 -0.010922 -0.7287 0.04429 -0.12291 -0.0053992 0.011121 -0.074846 -0.0066432 0.018663 -0.44491 -0.027835 0.0087528 -0.62823 -0.0081624 -0.57822 0.023789 -0.74159 0.0015427 0.29183 -0.25938 -0.32774 -0.26231 -0.71417 -0.47342 0.010703 -0.88557 -0.019259 0.013213 0.00597 0.0026357 -0.068261 0.0058309 -0.007472 -0.027671 0.020178 -0.020138 -0.016841 -0.0056757 -0.36147 -0.46233 -0.4786 0.0061348 -0.013815 -0.50641 -0.61911 -0.001515 -1.0305 -0.012104 -0.39074 -0.018628 -0.45656 -0.12559 0.03031 0.017264 -0.2939 -0.14652 0.012128 -0.62042 -0.29815 -0.0059522 0.003507 0.042185 -0.29552 0.20291 0.021323 0.014442 0.022585 0.067727 -0.093931 0.0034687 -0.23753 -0.4395 0.013632 -0.50764 -0.92458 -0.79087 -0.058866 0.015339 -0.95645 -0.28204 0.032143 0.0093098 0.018243 0 0.010982 0.00055459 -0.60487 0.015447 -0.39554 0.028763 0.003191 0.021807 -0.0043428 -0.020687 -0.26396 0.013074 -0.88 -0.38448 -0.0053992 0.0041632 -0.60593 -0.42239 0.0041632 0.027216 -0.015466 0.0076392 -0.26576 0.0058309 0.031014 -0.016857 0.0068044 -0.73003 0.0030522 -0.46323 0.020483 -0.75723 0.00083195 -0.038442 -0.41084 0.05637 -0.020987 0.013568 -0.021385 0.0079175 -0.45918 0.0047358 0.0030977 0.025531 0 0.013911 0.0080522 0.0027745 0.0083351 -0.005261 -0.30991 -0.23704 -0.29042 -0.0033243 -0.034086 0.001803 -0.13051 0.017124 0.013632 -0.24946 0.0076392 -0.20267 -0.60873 -0.63244 -0.23374 0.015308 0.01447 -0.078144 -0.37414 -0.83946 -0.44364 7.6177e-05 -0.025268 -0.0055375 0.010424 0.19978 0.032422 -0.027945 -0.67177 0.0080567 -0.52542 -0.30827 -0.2196 0.0089137 -0.0034627 0.031999 0.0012999 -0.24093 -0.20672 0.025531 -0.31634 -0.0062286 0.13273 -0.0042929 -0.34655 0.00069327 0.00058035 0.016366 -0.31377 0.0016642 0.00013863 -0.045228 0.010842 -0.1609 -0.0045695 0.011121 -0.0070552 -0.1738 0.0033299 0.0029133 -0.23116 0.0062481 0.0098615 -0.0024938 -0.46217 0.00013863 -0.003083 -0.022602 -0.024524 -0.46823 -0.015329 0.035267 -0.46387 -0.30744 -0.90507 0.052099 -0.0123 0.018943 -0.034904 0.0011093 -0.17366 0.026556 -1.1471 -0.3856 0.53749 -0.00028756 -0.38616 -0.14824 -0.74156 -0.030813 -0.019314 0.0093098 0.021875 -0.57422 0.0016642 -0.0034627 0.0012481 -0.9602 -0.27679 -0.60352 -0.20411 -0.20187 -0.17056 0.010285 -0.64846 -0.044957 0.010703 -0.032587 -0.28976 0 0.33399 0.0042318 -0.67598 0.045079 -0.40866 -0.043737 -0.014228 0.59188 0.10716 0.0091705 -0.054286 -0.36442 -0.005261 -0.47006 -0.066922 -0.027439 -0.22896 0.0019418 -0.023429 -0.20672 0.0027745 -0.0062286 -0.61997 0.0038854 -0.024251 -0.0015243 -0.031905 -0.74525 -0.77158 0.085943 -0.25322 -0.48144 -0.75728 -0.063301 0.63372 -0.87883 -0.0018014 0.0037465 -0.0015243 -0.2874 0.5508 -0.063972 -0.0033243 0.021884 -0.6368 0.0056919 0.0055529 -0.0069195 -0.4867 -0.024935 -0.37369 0.00027728 0.0034687 0.0065262 0.0029133 -0.17488 -0.37912 0.0040243 0.010285 -0.53073 -0.35442 -0.50546 -0.58033 -0.45276 -0.0023553 0.012097 -0.75262 -0.43648 0.11976 0.016985 -0.021098 -0.010922 -0.45383 0.0062481 -0.0096672 -0.46769 -0.0014266 -0.17006 0 -0.0073339 -0.22797 -0.74487 0.012097 0.0020805 -0.8719 0.00013863 0.0095883 0.0051359 -0.26396 -0.42637 -0.028218 0.01419 0.0048984 -0.27968 -0.6381 0.0084743 0.034754 -0.015054 -0.56336 0 0.016059 0 -0.53154 0.0011093 0.10278 0.0073609 -0.55286 -0.63595 0.057368 -0.78471 -0.0018046 Deletion Peak 31 - CN values 15q21.1 chr15:44953604-45299932(probes 1239764:1239847) chr15:45001788-45013397(probes 1239778:1239787) chr15:1-48091682(probes 1229479:1241613) 2.5735e-07 0.010419 Actual Copy Change Given 0.29803 -0.83041 0.009991 -0.52542 -0.17549 0.0041632 -0.050506 -0.65552 -0.60719 -0.0055375 -0.22084 -0.36895 -0.6726 -0.70457 -0.041702 -0.37966 -0.00097017 -0.43983 0 -0.48428 -0.01409 -0.0069195 0 -0.42923 -0.014916 -0.33676 0.020586 -0.42101 -0.78437 0.0087528 -0.61278 -0.51167 0.0030522 0.052668 0.001803 0.049824 0.023706 -0.25092 0.010285 -0.55067 -0.00013862 -0.0021179 -0.29331 -0.014778 0.33273 -0.54613 -0.187 0.0004348 0.00027728 0.013492 -0.63036 -0.0019399 -0.31482 -0.00027724 0.0081196 -0.78437 -0.0030475 -0.006505 -0.53067 -0.27655 -0.014778 -0.54663 0.0043029 0.0036076 -0.007472 -0.021098 -0.018765 -0.58622 -0.014503 -0.0029091 0.041741 -0.0078012 -0.36691 0.038489 0.013445 -0.42757 0.013074 -0.0044312 -0.0063373 -0.020687 -0.0123 0.00027728 -0.024251 -0.9874 0.71716 0.058081 -0.67984 -0.0033721 -0.75365 -0.76873 -0.71889 -0.44396 -0.44993 -0.0029091 0.0016642 -0.24204 -0.010922 -0.7287 0.04429 -0.12291 -0.0053992 0.011121 -0.074846 -0.0066432 0.018663 -0.44491 -0.027835 0.0087528 -0.62823 -0.0081624 -0.57822 0.023789 -0.74159 0.0015427 0.29183 -0.25938 -0.32774 -0.26231 -0.71417 -0.47342 0.010703 -0.48691 -0.019259 0.013213 0.00597 0.0026357 -0.068261 0.0058309 -0.007472 -0.027671 0.020178 -0.020138 -0.016841 -0.0056757 -0.36147 -0.46233 -0.4786 0.0061348 -0.67325 -0.50641 -0.61911 -0.001515 -1.0305 -0.012104 -0.39074 -0.018628 -0.45656 -0.12559 0.03031 0.017264 -0.2939 -0.14652 0.012128 -0.62042 -0.29815 -0.0059522 0.003507 0.042185 -0.29552 0.20291 0.021323 0.014442 0.022585 0.067727 -0.093931 0.0034687 -0.23753 -0.4395 0.013632 -0.50764 -0.92458 -0.79087 -0.058866 0.015339 -0.95645 -0.28204 0.032143 0.0093098 0.018243 0 0.010982 0.00055459 -0.60487 -1.1911 -0.39554 0.028763 0.003191 0.021807 -0.0043428 -0.020687 -0.26396 0.013074 -0.88 -0.38448 -0.0053992 0.0041632 -0.60593 -0.42239 0.0041632 0.027216 -0.025756 0.0076392 -0.26576 0.0058309 0.031014 -0.016857 0.0068044 -0.73003 0.0030522 -0.46323 0.020483 -0.75723 0.00083195 -0.038442 -0.41084 0.05637 -0.020987 0.013568 -0.021385 0.0079175 -0.45918 0.0047358 0.0030977 0.025531 0 0.013911 0.0080522 0.0027745 0.0083351 0.0090312 -0.30991 -0.23704 -0.29042 -0.0033243 -0.034086 0.001803 -0.13051 0.017124 0.013632 -0.24946 0.0076392 0.19603 0.30122 -0.63244 -0.23374 0.015308 0.01447 -0.078144 -0.37414 -0.0083005 -0.44364 7.6177e-05 -0.025268 -0.0055375 0.010424 0.19978 0.032422 -0.027945 -0.67177 0.0080567 -0.52542 -0.30827 -0.2196 0.0089137 -0.0034627 0.031999 0.0012999 -0.24093 -0.20672 0.025531 -0.31634 -0.0062286 0.13273 -0.0042929 -0.34655 0.00069327 0.00058035 0.016366 -0.31377 0.0016642 0.00013863 -0.045228 0.010842 -0.1609 -0.0045695 0.011121 -0.0070552 -0.1738 0.0033299 0.0029133 -0.23116 0.0062481 0.0098615 -0.0024938 -0.46217 0.00013863 -0.003083 -0.022602 -0.024524 -0.46823 -0.015329 0.035267 -0.46387 -0.30744 -0.90507 0.052099 -0.0123 0.018943 -0.034904 0.0011093 -0.17366 0.026556 -0.11861 -0.3856 0.53749 -0.00028756 -0.38616 -0.14824 -0.74156 -0.030813 -0.019314 0.0093098 0.021875 -0.57422 0.0016642 -0.0034627 0.0012481 -0.9602 -0.27679 -0.60352 -0.20411 -0.20187 -0.17056 0.010285 -1.2929 -0.044957 0.010703 -0.032587 -0.28976 0 0.33399 0.0042318 -0.67598 0.045079 -0.40866 -0.043737 -0.014228 0.59188 0.10716 0.0091705 -0.054286 -0.36442 -0.005261 -0.47006 -0.066922 -0.027439 -0.22896 0.0019418 -0.023429 -0.20672 0.0027745 -0.0062286 -1.2929 0.0038854 -0.024251 -0.0015243 -0.031905 -0.74525 -0.77158 0.085943 -0.25322 -0.48144 -0.75728 -0.063301 0.63372 -0.87883 -0.0018014 0.0037465 -0.0015243 -0.2874 0.5508 -0.063972 -0.0033243 0.021884 -0.6368 0.0056919 0.0055529 -0.0069195 -0.4867 -0.024935 -0.37369 0.00027728 0.0034687 0.0065262 0.0029133 -0.17488 -0.37912 0.0040243 0.010285 -0.53073 -0.35442 -0.50546 -0.58033 -0.45276 -0.0023553 0.012097 0.0070826 -0.43648 0.11976 0.016985 -0.021098 -0.010922 -0.45383 0.0062481 -0.0096672 -0.46769 -0.0014266 -0.17006 0 -0.0073339 -0.22797 -0.74487 0.012097 0.0020805 -0.8719 0.00013863 0.0095883 0.0051359 -0.26396 -0.42637 -0.028218 0.01419 0.0048984 -0.27968 -0.6381 0.0084743 0.034754 -0.015054 -0.56336 0 0.016059 0 -0.53154 0.0011093 0.10278 0.0073609 -1.0902 -0.63595 0.057368 -0.78471 -0.0018046 Deletion Peak 32 - CN values 15q22.33 chr15:67067796-67494822(probes 1253684:1254024) chr15:67350488-67491246(probes 1253909:1254022) chr15:67347687-67520673(probes 1253908:1254037) 0.00010434 0.00024982 Actual Copy Change Given 0.29803 -0.83041 0.009991 -0.52235 -0.17549 0.0041632 -0.050506 -0.65552 -0.60719 -0.0055375 -0.20697 -0.7732 0.013213 -0.70457 -0.063607 -0.38733 -0.00097017 -0.43756 0 -0.48428 -0.01409 -0.0069195 0 -0.42923 -0.014916 -0.33676 0.020586 -0.41663 0.041741 0.0087528 -0.24683 -0.51167 0.0030522 0.052668 0.001803 0.040326 0.023706 -0.25092 0.010285 -0.53378 -0.00013862 0.00458 -0.29331 -0.014778 0.33273 -0.54532 -0.187 0.014435 -0.0001985 0 0.016565 -0.0019399 -0.31482 -0.00027724 0.0050597 -0.78437 -0.013953 -0.0026322 -0.53399 -0.27655 -0.014778 -0.54663 0.006109 0.0036076 -0.007472 -0.021098 -0.018765 -0.60752 -0.014503 0.0043021 0.041741 -0.0078012 -0.36691 0.038489 0.013445 -0.42757 0.013074 -0.0044312 0.0023581 -0.020687 -0.0123 0.00027728 -0.024251 -0.311 0.71716 0.058081 -1.2929 -0.0033721 0.043299 -0.76873 -0.71131 -0.44396 0.010466 -0.0029091 0.0016642 -0.25176 -0.010922 -0.7037 0.04429 -0.12291 -0.0053992 0.011121 -0.074846 -0.0066432 0.016565 -0.45375 -0.027835 0.0087528 -0.62823 -0.0081624 0.010842 0.023789 -0.0076101 0.030169 0.29183 -0.25938 -0.32774 -0.24952 -0.71417 -0.47342 0.010703 -0.48722 -0.019259 0.013213 0.00597 0.0026357 -0.080141 0.0058309 -0.007472 -0.027671 0.011097 -0.020138 -0.016841 -0.0092362 -0.36147 -0.47017 -0.4786 0.0061348 -0.0099565 -0.50641 -0.14451 0.016146 -0.054616 0.0056116 0.56917 -0.016154 -0.4587 -0.12559 0.03031 0.0051465 -0.2939 -0.14652 0 -0.62042 -0.29485 -0.0092666 0.0017039 0.042185 -0.28513 0.21993 0.021323 0.013008 0.022585 0.067727 -0.093931 0.0034687 -0.23753 -0.4395 0.013632 -0.50639 -0.88837 -0.79087 0.048546 0.03198 -0.96713 -0.29638 0.032143 0.0093098 0.018243 0 0.010982 0.00055459 -0.60487 0.016286 -0.38224 0.028763 0.003191 0.021807 -0.0043428 -0.048478 -0.26396 0.013074 -0.88256 -0.38448 -0.0053992 0.0041632 -0.60448 -0.42239 0.0041632 0.027216 -0.025756 0.0076392 -1.1564 0.0058309 0.031014 -0.0048276 0.0068044 -0.73003 0.0030522 -0.46323 0.034113 -0.0013067 0.00083195 -0.033814 -0.40174 0.05637 -0.046473 0.013568 -0.026244 0.0079175 -0.45918 0.0047358 0.0030977 0.025531 0 0.013911 0.0073609 0.0027745 0.0083351 0.0090312 -0.31281 -0.23704 -0.2935 -0.0033243 -0.034086 0.001803 -0.10365 -1.2929 0.013632 -0.24946 0.0076392 -0.2 -0.46493 -0.63244 -0.22748 0.015308 0.01447 -0.078144 -0.37414 -0.0083005 -0.44364 7.6177e-05 -0.0055375 -0.0055375 0.010424 0.19978 0.032422 -0.027945 -0.67177 0.0080567 -0.52542 -0.30909 -0.2196 0.0089137 -0.0034627 0.031999 0.0012999 -0.24093 -0.20672 0.025531 -0.31634 -0.0062286 0.13273 -0.0042929 -0.35651 0.00069327 0.0069435 0.016366 -0.31377 0.0016642 0.00013863 -0.045228 0.010842 -0.1609 -0.0045695 0.011121 -0.0070552 -0.1738 0.0033299 0.0029133 -0.23116 0.0062481 0.015866 -0.0024938 -0.46217 0.00013863 -0.003083 -0.022602 -0.024524 -0.47192 -0.015329 0.04883 -0.46387 -0.30744 -0.55423 0.047978 -0.013992 0.0084743 -0.034904 0.0027745 -0.16994 0.026556 -0.11861 -0.3856 0.5176 -0.00028756 -0.38616 -0.14824 -0.74654 -0.030813 -0.019314 0.0093098 0.021875 -0.57422 0.0016642 -0.0034627 0.0012481 -0.022469 -0.2823 -0.60352 -0.20411 -0.2061 -0.17056 0.010285 0.024408 -0.044957 0.010703 -0.032587 -0.28976 0 0.33399 0.0042318 -0.66068 0.045079 -0.40866 -0.043737 -0.014228 -0.61076 -0.2051 0.0091705 -0.054286 -0.36442 -0.005261 -0.47006 -0.0096806 -0.027439 -0.22896 0.0019418 -0.023429 -0.20672 0.0027745 0.0036076 -0.59643 0.0038854 -0.024251 -0.0015243 -0.033814 -0.74525 -0.77158 -0.83106 -0.25821 -0.49248 -0.75728 -0.063301 0.63372 -0.87883 -0.0018014 0.0037465 -0.0046944 -0.28265 -0.54668 0.3421 -0.0033243 0.021884 -0.013127 0.0056919 0.0055529 -0.0069195 -0.4867 -0.024935 -0.37369 0.00027728 0.0034687 0.0065262 0.0029133 -0.17104 -0.37912 0.0040243 0.010285 -0.53073 -0.3592 -0.50546 -0.58033 -0.45276 -0.0023553 0.012097 0.0070826 -0.43648 0.11976 0.016985 0.52048 -0.010922 -0.45426 0.0062481 -0.0096672 -0.46664 0.0055529 -0.19149 0 -0.0073339 -0.22797 -0.73941 0.012097 0.0020805 0.029606 0.00013863 0.0095883 0.0051359 -0.26396 -0.42637 -0.028218 0.01419 0.0048984 -1.2929 -0.64497 0.0084743 0.036512 -0.015054 -0.56336 0 0.016059 0 -0.53154 0.0011093 -1.2929 0.0057893 -0.52338 -0.66395 0.057368 -0.78471 0.0080567 Deletion Peak 33 - CN values 16p13.3 chr16:5144019-7780235(probes 1275346:1276822) chr16:6066397-7771745(probes 1275977:1276810) chr16:5410372-7683849(probes 1275520:1276692) 2.8781e-123 2.8781e-123 Actual Copy Change Given -0.0044312 0.057796 0.0062328 0.012097 0.074848 -0.0059522 -0.53195 0.28319 0.46314 0.0056346 0.012934 0.33383 -0.75167 -0.23496 0.0015255 -0.26841 0.38105 -0.28742 -0.005261 -0.036538 -0.0076101 0.68403 -0.038306 -0.41248 -0.024661 -0.03095 -0.10424 0.34551 0.041741 0.0037063 0.61625 0.51756 -0.010094 0.072684 -0.01357 -0.014916 0.040751 0.35414 0.0052749 0.062508 0.28834 -0.0060904 -0.0059522 -0.012576 -0.087158 -0.0055375 -0.25991 0.021569 0.0015255 0.34724 0.0054139 -0.0045695 0.042732 -0.052261 0.0021433 -0.13199 -0.037082 0.024489 -0.64362 0 -0.025072 0.004719 0.0054139 0.0066653 -0.028218 -0.03857 -0.018216 0.054885 -0.027398 -0.01354 0.042307 -0.02154 0.015727 0.053521 -1.1551 -0.0047079 -0.0092666 -0.014228 -0.010508 0.46024 -0.018628 -0.011511 0.023987 0.49764 -0.019314 0.31835 1.6342 -0.0008316 0.033972 0.13694 0.075275 -0.22825 0.46695 -0.0085766 -0.0099565 -0.029448 0.060382 0.30999 0.035524 0.5135 -0.032824 0.015447 0.013215 -0.019314 -0.8527 -0.095342 0.046247 -0.0016629 0.20275 -0.0089906 -0.0023553 0.72123 0.0016642 -0.0056908 0.23628 -0.25491 0.33723 0.063865 0.086892 0.0091705 0.020343 0.044007 -0.0053433 0.4153 -0.0070576 0 0.03031 -0.0020784 0.5142 -0.029857 0.018638 -0.045919 -0.0087146 -0.012433 -0.38739 -0.84239 0.10103 0.67292 -0.018628 0.82018 0.078438 -0.029448 0.49822 -0.010726 -0.0067813 0.018383 0.29632 0.00019456 -0.73766 -0.0060904 0.3771 0.25793 0.53876 0.53384 0.50985 -0.052224 -0.01116 -0.62158 0.13909 0.44869 -0.44275 -0.00069303 0.010703 -0.63278 0.5865 0.23969 -0.28144 0.0013972 0.56561 0 0.091408 0.057421 0.46939 0.0027558 0.031718 -0.2201 -0.0030445 -0.0062286 0.013772 -0.0030475 -0.062764 -0.0092666 0.060651 -0.0029091 -0.36827 -0.010542 -0.032996 0.033754 -0.0083502 -0.72075 0.22437 -0.010646 0.072971 0.058224 -0.032996 -0.020824 0.029606 0.55822 -0.017391 0.018803 0.39795 0.01419 0.030451 -0.0067813 0.029044 -0.013127 0.0013937 0.90653 -0.0049844 0.040468 0.072253 -0.025268 0.0016642 -0.027261 0.095798 -1.0458 -0.011775 0.00076866 -0.082076 -0.0051227 0.18283 -0.8351 -0.0072886 0.41479 -0.011473 -0.0040162 0 -0.013264 0 -0.0096806 -0.030267 0.19984 0.15449 -0.0095426 0.12432 -0.010508 -0.13005 -0.70845 0.010842 -0.39726 -0.010508 -0.10753 0.33966 0.69951 -0.26997 0.010703 -0.0016629 0.24187 -0.38107 -0.017666 0.81196 0.0073609 -0.017391 -0.014916 0.016286 -0.12841 -0.0031859 0.1628 -0.020549 0.024969 -0.0060904 0.0052749 -0.0073339 -0.00039423 0.0048579 0 -0.0094046 0.036533 0.43969 0.037217 -0.25031 0.79355 0.4424 -0.013402 0.066372 0.0068044 0.20641 0.010087 0.050961 -0.005261 -0.013127 0.34713 0.00013863 -0.068931 -0.014916 -0.0026322 -0.027398 0.76359 -0.0048461 0.45888 -0.2514 -0.012162 -0.059404 -0.0049844 0.087824 -0.0123 -0.016602 0.44195 -0.03095 0.019503 -0.01409 0.23766 0.030451 -0.6313 0.075472 -0.32484 -1.2929 0.027919 0.36821 0.0048579 -0.90419 -0.10062 -0.04211 0.29056 -0.0063668 -0.010794 0.13332 0.13509 -0.13738 -0.04048 0.27143 -0.0015243 -0.11365 0.19886 -0.015741 -0.6333 -0.0059522 -0.065447 0.018943 -0.00041585 -0.18118 0.54735 0.03863 0.021183 0.033831 0.40294 0.032281 0.027357 -0.30051 -0.013569 -0.2744 -0.018422 0.20289 0.025329 0.027216 0.039761 -0.035993 -0.0092863 0.44884 -0.0058363 0.015587 0 -0.014228 0.01039 0.0036076 -0.041159 0.042024 -0.0055375 -0.03395 0.15427 -0.0024938 -0.013677 0.20595 -0.014916 -0.044822 -0.018902 0.35496 0.071391 0.044148 -0.72332 -0.070536 -0.51918 0.037359 -0.087844 -0.81925 0.073992 -0.014366 0.0029133 -0.0085766 -0.004868 0.014402 -0.0099565 0.011958 0.011958 -0.01409 0.0051359 -0.017941 -0.018353 0 -0.63434 1.1104 0.0024969 -0.0012473 0.00083195 0.0024969 0.033721 0.21066 -0.0023553 0.014051 0.039761 0 -0.03095 0.019223 0.0033299 -0.016292 0.0044411 -0.80393 0.063509 0.12064 0.015727 -0.028218 -0.0031859 0.17347 -0.005261 0.68943 0.46878 -0.02562 1.0393 0.34119 0.022304 0.011539 0.085943 0.22901 -0.0008316 0.04741 0.10701 -0.0040162 -0.010922 0.087969 -0.37403 -0.0059522 0.0058309 -0.33369 -0.47841 0.078182 -0.015329 0.0005292 0.10994 0.88492 -0.0040162 0.023058 -0.19224 -0.040616 0 -0.014778 -0.0015243 0.76025 -0.17082 0.05908 -0.39196 -0.005814 Deletion Peak 34 - CN values 16q23.1 chr16:78098006-79031486(probes 1306649:1307398) chr16:78129058-79247026(probes 1306680:1307684) chr16:78407568-79170918(probes 1306924:1307580) 6.439e-33 6.439e-33 Actual Copy Change Given -0.0044312 0.048155 -0.0085917 -0.16115 0.074848 -0.0059522 -0.5427 0.28319 -0.35385 -0.0038779 0.012934 0.33193 -1.2547 0.5345 -0.71435 0.36149 0.38105 -0.51486 -0.005261 0.65461 -0.0076101 0.36137 -0.02562 0.037886 -0.037744 -0.02614 -0.087349 0.34551 0.041741 0.0037063 0.61625 -0.28061 -0.76911 0.072684 -0.048476 -0.81745 0.040751 0.35414 0.0052749 -0.48596 0.28834 -0.0060904 -0.016429 -0.032996 -0.094667 0.0017481 -0.24082 0.021569 -0.34549 0.3692 -0.0058631 0.0034687 0.042732 -0.14952 -0.00063038 0.057083 -0.020412 0.020699 -0.016486 0 -0.057385 -0.52624 0.0054139 0.0066653 -0.028218 -0.03857 -0.018216 -0.55441 -0.027398 -0.6691 0.042307 -0.42935 0.035383 0.034202 0.02059 -0.0047079 -0.0092666 -0.0012473 -0.010508 0.46024 -0.019726 -0.0055375 0.037359 0.49764 -0.022743 0.31835 0.57287 -1.0851 0.011723 0.13694 -0.75295 0.24945 0.46695 -0.0085766 -0.0099565 -0.029448 0.063223 0.3129 0.035524 0 -0.027808 0.015447 0.035628 -0.019314 -0.086133 0.072684 0.05008 -0.69739 0.20275 -0.0089906 0.52258 0.72123 0.0016642 -0.0056908 0.23628 -0.26191 0.33723 0.063865 0.053664 0.0091705 0.0055092 0.044007 -0.074624 0.41647 -0.0070576 -0.068395 0.047552 -0.0098185 0.5142 -0.029857 0.018638 -0.032041 -0.64518 -0.01409 -0.38739 0.18608 -0.055499 0.67292 -0.018628 0.82018 0.078438 -0.022606 0.49822 -0.015271 -0.56704 0.018383 0.33197 0 -0.72367 -0.88101 0.26954 0.25793 0.53876 -0.0099186 0.50985 -0.016429 0.57653 -0.072271 0.11946 0.48615 -0.15311 -0.00069303 0.0056919 0.0053389 0.54418 0.23969 -0.6103 -0.58891 0.56561 0 0.074516 0.030836 0.54559 -0.024352 0.049682 0.28026 -0.023974 -0.0062286 -0.0096806 -0.0030475 -0.062764 -0.018902 0.060651 -0.75917 0.53309 -1.2929 -0.041024 0.026076 -0.0083502 -0.044144 0.20305 -0.010646 0.031594 0.058224 -0.069278 -0.020824 0.029606 0.55822 -0.017391 0.043299 0.39795 0.01419 0.035242 -0.47406 -1.0693 -0.013127 0.0013937 0.37166 -0.0049844 0.040468 0.034959 -0.025268 0.0015255 -0.027261 -0.38772 0.044398 -0.034142 0.00076866 -0.05571 -0.90487 -0.47353 0.0049969 -0.0072886 0.41479 -0.028628 -0.0040162 0 -0.013264 0 -0.0098185 -0.030267 0.19984 0.15449 -0.031359 0.12432 -0.010508 -0.14258 0.042874 0.00083195 0.086956 -0.063972 -0.082155 0.33966 0.054945 0.19406 -0.016841 -0.0016629 0.24187 -0.37966 -0.017666 0.48307 0.0073609 -0.016979 -0.056307 0.012934 -0.10872 -0.024979 -0.49475 -0.007472 0.023286 -0.044144 0.31257 -0.0073339 -0.97714 -0.0094332 -0.44749 -0.0094046 0.43837 0.43969 0.037217 -0.25031 0.74302 -0.10775 -0.013402 0.066372 0.0068044 -0.12836 0.0086939 0.050961 -0.005261 -0.013127 -0.05496 0.00013863 0.26294 -0.014916 -0.0026322 -0.027398 0.76359 -0.019804 -0.089434 -0.2514 -0.012162 -0.0094618 0.0063871 0.070099 -0.0123 -0.016602 0.026659 -0.03095 0.019503 -0.01409 0.25027 0.030451 0.010295 0.075472 -0.29296 0.26954 0.027919 0.37084 -0.0011285 -0.10973 -0.10062 -0.039801 0.29056 -0.0063668 -0.010794 0.13332 0.13509 -0.018857 -0.026441 0.27143 -0.0015243 -0.11365 0.11178 -0.025893 0.47512 -0.0059522 -0.030404 0.018943 -0.00041585 -0.18118 0.54531 0.03863 0.021183 0.02511 0.41195 0.032281 0.027357 -0.29307 -0.010784 -0.2744 0.78051 0.20289 0.012315 -0.51793 0.039761 -0.017116 1.1364 -0.0022168 -0.015191 0.015587 0 -0.012162 0.43323 0.0026357 -0.041159 0.042166 -0.0055375 -0.03395 0.15427 -0.0098185 -0.015749 0.1682 -0.025756 -0.044822 -0.70675 0.37759 0.071391 0.032281 0.076854 0 0.0072217 0.037359 -0.15982 -0.033814 0.065098 -0.014366 0.0029133 -0.0085766 -0.004868 0.014402 -0.044509 0.011958 0.011958 -0.050235 0.0039813 -0.010508 -0.027398 -0.0091286 1.3362 0.55018 0.0040253 -0.0012473 0.0048579 -0.015191 0.033721 0.24902 -0.0023553 0.014051 0.039761 0 0.5433 0.019223 0.0079175 -0.016292 0.0044411 0.016286 0.063509 0.13974 0.015727 -0.025209 -0.0031859 0.017404 -0.005261 0.68943 0.46981 -0.02562 0.33918 0.35463 0.0063871 0.011539 0.085943 0.22901 -0.0008316 0.035524 0.10701 -0.0040162 -0.025346 0.079303 -0.046989 -0.0059522 0.0058309 -0.33014 -0.47841 0.044889 -0.096044 0.014355 0.10994 0.80714 -0.0038779 0.014649 -0.071205 -0.040616 0 -0.014778 -0.71702 0.35251 -0.17082 0.015812 -0.3864 -0.005814 Deletion Peak 35 - CN values 17p12 chr17:11060240-12456081(probes 1319361:1320375) chr17:11868808-11904146(probes 1320009:1320017) chr17:11434765-12032068(probes 1319705:1320088) 5.2506e-05 5.3312e-05 Actual Copy Change Given -0.32971 -0.83502 0.55335 -0.54763 -0.81268 0.0049969 -0.5294 -0.86141 -0.11639 0.0044411 -0.21565 -0.413 0.004445 -0.83873 -0.82362 -0.023292 -0.44491 -0.43799 -0.0092666 -0.71871 -0.65239 -0.37561 0.35953 -0.41655 -0.020275 0.13022 -0.46411 -0.26167 -0.7874 -0.30557 -0.73073 -0.18547 0.0054139 0.065923 -0.007472 0.00597 -0.8177 -0.50908 -0.44717 -0.55317 -0.7295 0.0012481 0.32818 -0.41388 -0.16673 -0.54844 0.052099 -0.79246 0.0094491 -0.22465 0.0079175 -0.0062286 -0.61431 -0.00013862 -0.0056132 -0.78151 -0.030131 0.012934 -0.57095 -0.27822 -0.028691 -0.5792 -0.5713 -0.70334 -0.03504 -0.075078 -0.029857 -0.62383 -0.77558 -0.0037395 -0.83788 -0.012215 -0.81515 -0.66008 -0.49416 -0.43691 -0.81087 -0.020525 -0.010508 -0.024503 -0.031905 -0.0037395 -0.0084385 -0.31766 0 -0.087447 -0.6941 -0.0073339 -0.76724 -0.77409 -1.1153 -0.50869 -0.45423 0.001803 -0.0091155 -0.82391 -0.0042929 -0.74606 -0.89442 -0.54027 -0.9463 -0.71239 -0.53442 0.00097064 -0.010508 -0.44297 -0.79187 0.00083195 -0.6352 -0.018353 -0.58755 -6.0758e-05 -0.017254 -0.55587 -0.00027724 -0.25612 -0.79336 -0.74164 -0.79928 -0.48817 0.016705 -0.79034 -0.0027146 -0.5242 0.011261 0.0037139 -0.23323 -0.029038 -0.55597 -0.054825 -0.68744 0.10235 -0.016154 -0.0098185 -0.38011 -0.49856 -0.53836 -0.018877 -0.02562 0.36033 -0.78774 -0.03095 -0.57021 0.0017228 -0.039665 -0.67168 -0.48738 -0.75569 -0.029175 -0.00055444 -0.64593 -0.6041 -0.54055 -0.62976 -0.69532 -0.52839 -0.00089686 -0.63139 0.10351 -0.15437 0.037782 0.011539 0.010285 -0.67837 -0.57625 -0.57478 0.10468 -1.2929 -0.56266 -0.84323 0.10114 -0.79722 -0.43843 0.01166 -0.98259 -0.32449 0.011542 0.011818 -0.36618 -0.026988 -0.026304 -0.0014349 -0.60404 0.019643 -0.3933 0.0041632 -0.038488 -0.95395 -0.010912 -0.72491 -0.26384 0.0114 -1.2929 -0.97046 -0.81104 -0.0013858 0.026795 -0.54629 -0.33017 -0.71051 -0.83381 0.021323 -0.60051 0.00027728 0.031999 0.0044644 -0.95927 -0.28323 0.0019418 0.038913 -0.84923 -0.0089118 0.00027728 -0.059269 -0.75504 -0.95057 -0.61673 -0.81231 -0.098888 -0.0040162 -0.43897 0.0012481 0.0024036 -0.37853 0.0013868 -0.58274 -0.41399 -0.00097017 -1.2929 -0.0073339 -0.19149 -0.23496 -0.32011 -0.009831 -0.61133 0.0026357 -0.93622 -0.73152 0.012237 -0.40571 0.0048259 -0.26372 -0.13113 -0.62467 -0.24934 0.025952 0.010006 -0.064508 -0.37651 -0.023292 -0.025788 -0.71953 -0.03395 -0.020138 -0.14695 -0.84631 -0.00055444 -0.40926 -0.89787 -0.78117 -0.53855 -0.0012473 -0.344 0.023728 -0.0087234 -0.39196 -0.041974 -0.71937 -0.46982 0.033127 -0.47986 -0.6263 -0.59263 -0.0008316 -0.82847 0.0034687 -0.4342 -0.87762 -0.29568 0.0072217 0.0040243 -0.25176 0.018279 -0.23814 -0.021373 0.00069327 -0.029584 -0.82753 0.0076392 -0.4644 -0.23692 0.0027745 0.020623 -0.0080244 -0.45683 -0.0071958 -0.014126 -0.02753 -0.096125 -0.48697 -0.023429 -0.6508 -0.47152 -0.47066 -0.62699 -0.37909 -0.017254 0.027919 -0.029994 0.0066653 -0.16155 -0.21771 -0.22355 -0.39664 0.015447 0.00068294 0.10031 -0.41553 0.0049969 -0.7732 -0.58353 0.014051 -0.6147 -0.7238 -0.018466 -0.63989 0.00083195 -1.0116 -0.36386 -0.00041585 0.32801 -0.73888 -0.059135 -0.42637 -0.65351 -0.50722 -0.82578 -0.78883 0 -0.0030475 -0.70046 -0.82989 -0.67609 -0.26148 -0.43127 -0.0047079 -0.067458 -0.62217 -0.14477 0.017824 -0.57565 -0.37898 -0.0073339 -0.48693 -0.11721 -0.37189 -0.53561 0.0027745 -0.03286 -0.23386 -0.0013858 -0.0018014 -0.61594 0.0085064 -0.043466 -0.71346 -0.28513 -0.77583 -0.77821 -0.076945 -0.69378 -0.46408 -0.69296 -0.050212 -0.79394 -0.89801 0.0043021 0.010424 -0.73643 -0.55643 -0.5503 -0.80534 -0.0055375 -0.82489 -0.54764 0.0093098 -1.2929 -0.0094046 0.42234 -0.043331 -0.37065 -0.14155 -0.0085766 0.01185 0.017544 -0.030647 0.18461 -0.49996 0.02539 -0.53835 -0.75874 -0.51404 0.0062481 -0.005261 -0.0077482 0.012097 0.0054139 -0.97821 0 -0.52961 0.41848 0.0037465 -0.48218 0.0029133 -0.73906 -0.47395 0.0020805 -0.49131 -0.43983 -0.40008 -0.52665 -0.74332 -0.28073 0.0033299 0.0013868 -0.041253 0.0022193 0.0043021 -0.29282 -0.43235 0.0072217 0.010424 0.021784 -0.38875 -0.63356 -0.0063668 -0.76407 -0.73743 -0.53601 -0.63519 -0.69224 -0.88774 -0.55937 -0.95297 -0.8575 0.001747 -1.2929 -0.65631 -0.84331 -0.81005 -0.00013862 Deletion Peak 36 - CN values 17q24.3 chr17:68173089-70642789(probes 1344772:1346696) chr17:70315293-70640081(probes 1346455:1346689) chr17:70396116-70499515(probes 1346533:1346596) 0.035214 0.035299 Actual Copy Change Given 0.35023 0.82079 0.55335 0.2858 0.087109 0.0049969 0.067375 0.35569 -0.11639 0.0044411 -0.19537 0.23055 0.038206 1.0201 0.59278 -0.023292 0.023706 -0.03504 -0.0092666 0.075991 -0.66281 -0.007472 0.27836 0.050781 -0.020275 0.13022 0.42448 -0.26167 0.024268 -0.29886 0.12314 0.32333 0.0054139 0.079159 -0.007472 0.00597 0.56952 0.17226 -0.019177 -0.54169 0 0.0012481 0.32818 -0.7374 -0.16673 0.031577 0.052099 0.77286 0.0094491 0.09304 0.0079175 -0.0062286 0.11173 -0.00013862 -0.0056132 0.052383 -0.026304 0.012236 0.038148 0.010703 -0.011861 0.48716 0.55248 0.68459 -0.03504 0.68273 -0.029857 0.017624 -0.014778 -0.0037395 0.038065 -0.012215 0.046984 -0.56724 0.50267 -0.014245 -0.014503 0.74975 -0.010508 -0.024503 -0.036401 -0.0037395 -0.0084385 0.0033081 -0.00096957 -0.087447 -0.66147 -0.0073339 0.043621 0.0082626 -0.32379 0.0083008 0.43349 0.001803 0.0083351 1.4861 -0.0042929 -0.70926 0.051103 0.019083 -0.0084385 0.012516 -0.53442 0.00097064 -0.010508 -0.4505 0.021996 0.00083195 -0.54104 -0.016704 0.0081959 0.68842 -0.017254 0.029466 -0.00027724 -0.25612 -0.79043 0.22615 0.13406 0.049824 0.016705 0.1345 -0.0027146 0.010842 0.011261 0.0037139 -0.1211 0.73151 0.45615 -0.054825 0.02242 0.10235 -0.016154 -0.0098185 0.098706 0.012997 -0.52481 -0.0077226 -0.02562 0.36033 0.10599 -0.067458 0.063939 0.0017228 -0.045499 0.058224 0.32197 -0.11997 -0.00041585 -0.00055444 0.069525 0.28913 -0.45488 0.042913 0 0.036794 -0.00089686 0.048281 0.11668 -0.52009 0.018622 0.011539 0.019503 0.088904 -0.06585 0.54249 0.10468 0.25231 0.023145 0.15935 0.10114 0.83642 -0.43843 0.01166 0.0282 0.26334 0.030595 0.010703 -0.36558 -0.0012473 0.044715 0.0072294 0.080601 0.019643 -0.79578 0.023005 -0.017529 1.1509 -0.010912 -0.074544 -0.26384 0.018383 0.074919 0.054376 0.74423 -0.0013858 0.026795 0.037554 -0.33017 -0.68779 0.7984 0.021323 0.015028 0.00027728 0.033408 0.0079175 0.91909 -0.29467 0.0019418 0.028279 0.086233 -0.0089118 0.00027728 -0.059269 -0.7559 -0.9329 -0.016455 0.034754 -0.065389 -0.0040162 0.14073 0.0012481 0.0024036 0.029044 0.0013868 0.030451 0.42957 -0.00097017 0.42133 -0.0073339 -0.19149 -0.23496 0.241 -0.0051227 -0.16013 0.0026357 0.39811 0.010703 0.012237 0.50273 0.0048259 0.11985 -0.038015 0.075894 -0.23312 0.022202 0.010006 -0.064508 -0.37651 -0.020412 -0.93136 -0.0045695 -0.014641 -0.020138 -0.053881 0.47043 0.018243 0.47204 -0.0053992 0.034254 -0.091949 -0.0012473 0.24373 0.023728 -0.0056757 -0.30979 0.0086135 0.21118 0.083342 0.033127 -0.098155 0.064225 -0.022606 -0.0008316 0.094637 0.0034687 -0.4342 0.88958 -0.30768 0.0072217 0.0040243 -0.070001 0.027778 0.37149 -0.037122 0.00069327 -0.029584 -0.34119 0.0076392 0.020203 -0.22924 0.0027745 0.020623 -0.0080244 0.089561 -0.0071958 -0.014126 -0.02753 -0.05496 -0.48481 -0.023429 0.21745 -0.46717 0.28803 0.17436 0.39197 -0.017254 0.027919 -0.028355 0.0029133 -0.1841 0.036554 -0.22355 0.17513 0.0025622 0.00068294 0.10031 0.14816 0.0049969 -0.00041585 0.29024 0.014051 0.069517 -0.25109 0.00013863 -0.020138 0.00083195 0.86295 0.57844 -0.00041585 0.32801 0.042024 -0.059135 -0.42637 0.6392 0.40411 0.036653 0.74157 0 -0.0030475 0.035665 0.75061 0.24934 -0.26858 0.42923 -0.0047079 1.3781 0.62224 -0.14477 0.017824 0.024969 0.060794 -0.0073339 -0.01495 0.015002 0.24435 0.021183 0.0027745 -0.03286 -0.22846 -0.0013858 -0.0018014 -0.23325 0.0085064 -0.043466 0.0051359 -0.3856 -0.24667 0.04954 -0.076945 -0.074558 -0.46408 -0.69296 -0.025072 -0.78782 0.061523 0.0043021 -0.82064 0.0044411 0.18672 0.01189 0.013074 -0.0055375 0.028481 0.071966 0.0093098 -1.2929 -0.0094046 0.42234 -0.043331 -0.37065 -0.0030475 -0.0085766 -0.40274 0.017544 -0.030647 -0.4404 0.0022193 0.02539 0.051387 0.0093098 -0.51032 0.0022193 -0.005261 -0.0077482 0.012097 0.0054139 -0.4076 0 0.021043 0.43665 0.0037465 0.45803 0.0029133 0.014609 0.48148 0.0020805 0.34421 0.36936 0.35773 0.016006 0.46314 0.11829 0.0033299 0.048688 0.00458 0.0022193 0.0043021 0.19725 0.32898 0.0072217 0.010424 0.021784 -0.41089 0.061111 -0.0063668 -0.7553 0.77406 -0.55387 0.56472 0.025443 -0.41871 1.4637 0.94647 -0.011749 0.001747 -0.53104 0.2825 0.066086 0.023426 -0.00013862 Deletion Peak 37 - CN values 18p11.31 chr18:3277692-5145388(probes 1352040:1353286) chr18:3569835-3575803(probes 1352212:1352214) chr18:3394680-3706587(probes 1352116:1352301) 0.041611 0.041729 Actual Copy Change Given -0.3566 -0.84339 -0.59508 -0.49287 -0.80484 -0.013127 0.030732 -0.64945 -0.62547 0.0015255 -0.22699 -0.76398 0.0077783 -0.8283 -0.81597 -0.38806 -0.44827 -0.44124 -0.49036 -0.82497 -0.65557 -0.3559 0.060936 -0.42879 0.0012481 -0.36295 -0.39556 -0.50484 -0.79995 -0.0094046 -0.7288 -0.53612 -0.021592 -0.89534 -0.43061 -0.0084385 -0.84931 -0.56982 -0.44297 0.04429 -0.71871 0.0011093 -0.55377 -0.37324 0.26281 -0.57417 -0.24946 -0.81804 0.19757 -0.16665 0.0016642 -0.010094 -0.60999 -0.0012473 0.0047818 -0.78488 -0.49204 -0.37797 -0.5115 -0.28215 0.0039075 -0.52614 -0.55807 -0.68997 0.010749 0.0010211 0.0051359 -0.60694 -0.011611 0.43125 -0.79411 0 -0.79151 0.014609 -0.49885 -0.4044 0.073402 0.00069327 -0.67884 0.0029133 -0.0016629 -0.73177 -0.83575 -0.61971 -0.023154 -0.65938 0.012143 0.011958 -0.74636 -0.76529 0.041603 -0.52851 -0.4735 0.00055459 -0.0013858 -0.33179 -0.021647 -0.7242 -0.9051 -0.52849 0.061365 -0.66883 -0.53442 -0.0042929 -0.010922 -0.40108 -0.80335 0.0029018 -0.66842 0.0040243 -0.56952 -0.77043 0.022406 0.56472 -0.0083005 -0.266 -0.8041 -0.74807 -0.84235 -0.48921 0 -0.48649 -0.00035971 -0.48701 -0.0047079 0.075991 0.33885 0.015727 -0.0020784 0.00013863 -0.68962 -0.019863 0.018663 -0.0043556 -0.36488 -0.47433 -0.52205 -0.83662 -0.0022168 -0.5059 -0.74508 0.029747 -0.21317 -0.00063452 0.018663 0.021463 -0.43349 -0.12922 -0.70585 -0.0020784 -0.65799 -0.6122 -0.53254 -0.62013 -0.198 -0.49996 -0.00093199 -0.085041 -0.68742 -0.48826 0.00013863 0.034254 0.0013868 0.011743 -0.57269 -0.56555 0.069095 -0.53021 -0.58157 -0.86484 -0.94943 -0.81682 -0.57486 0.010545 -0.92719 -0.29745 0.0056949 0 -0.73328 -0.0095426 -0.61892 0.0034687 -0.60022 -0.012024 -0.40473 -0.006505 0.0029133 -0.96039 -0.010282 -0.66633 -0.72668 0.023426 0.042449 -0.96767 -0.73722 -0.0040162 -0.61834 -0.91497 0.31755 -0.68906 -0.0073339 -0.0036011 -0.56186 0.006109 0.0077783 -0.0013858 0.058224 -0.75167 -0.0015243 -0.46759 0.10628 0.79153 -0.0033243 -0.046312 -0.45394 -1.0046 -0.56904 -0.80662 -0.0024333 -0.0022168 -0.49641 0.0027961 0.003792 -0.38201 0.17392 -0.54975 -0.40628 -0.013677 -0.42462 -0.0091286 -0.6643 -0.71221 -0.29893 -0.0095426 -0.66133 0.0084743 -0.92867 0.010424 -0.0062286 -0.33618 -0.0042929 0.45564 -0.46642 -0.64621 0.57791 -0.0026322 -0.0044312 -0.42774 -0.78513 0.0020885 -0.45493 -0.70585 -0.0069195 0.0048579 -0.0089906 -0.84559 -0.0056757 -0.3953 -0.86955 -0.78389 -0.13329 -0.31937 -0.071873 -0.0099349 -0.0029091 -0.34205 -0.046718 -0.70423 -0.4341 0.019503 0.3395 -0.62655 -0.011611 -0.020824 -0.82171 -0.0096806 -0.44559 -0.87723 -0.34962 -0.0036011 -0.0083005 -0.42495 -0.019863 0.076422 0.0052749 0.00027728 -0.011198 -0.84879 -0.012162 -0.47666 -0.23398 -0.0023553 -0.0056757 -0.0059522 -0.48533 -0.007472 -0.00072855 -0.0042879 0.81884 -0.47141 -1.2838 -0.61825 0.50863 -0.39868 -0.62499 -0.35601 -0.039394 -0.52154 -0.093403 -0.0077482 -0.13446 0.020105 -0.7257 -0.77998 -0.0033243 -0.0048565 -0.71506 -0.41729 -0.73082 -0.51496 -0.011473 0 -0.60642 -0.72096 0.34258 -0.75253 -0.0038779 1.0604 1.6482 -0.68387 -0.2097 -0.73941 -0.71479 -0.96889 -0.63121 -0.023299 -0.34194 -0.77277 -0.28798 -0.00055444 0.33631 -0.81823 -0.65165 0.00021672 -0.45554 -0.41014 -0.014778 -0.65267 -0.23435 0.45564 0.0034687 -0.21862 -0.0041546 0.37146 -0.57447 -0.38246 -0.47416 -0.0036011 0.26671 -0.59087 -0.00069303 -0.0062286 -0.64734 -0.015741 -0.010922 -0.14026 -0.59617 -0.80401 0.80714 -0.052159 -0.10592 -0.51146 -0.7692 0.70345 -0.74734 0.014763 -0.00097017 -0.0049844 -0.73923 0.73527 0.11711 -0.80443 0.0094491 -0.85464 -0.65491 0.0013868 -0.6783 0.68068 -0.49308 -0.034359 -0.84787 0.0063871 0.00597 -0.40771 0.034254 -0.066089 -0.56019 -0.48239 -0.30897 -0.53523 -0.74438 -0.5293 -0.58373 -0.45608 -0.0069537 -0.0077482 -0.76604 -0.4312 -0.21775 -0.52726 0.47426 -0.0063668 -0.47857 -0.0037395 0.0058309 -0.48323 -0.0012473 -0.88217 -0.031223 0.027357 -0.51825 -0.76398 -0.011749 -0.0012473 -0.013127 -0.0019399 0 -0.0019399 -0.55777 -0.47059 -0.136 -0.0077482 -0.40558 -1.127 -0.63574 -0.0013858 0.49545 0.013772 -0.49319 -0.6257 -0.6883 -0.84555 -0.030813 -0.97814 -0.84411 -0.0027707 -0.56077 -0.63368 -0.85496 -0.78697 -0.0097876 Deletion Peak 38 - CN values 18q12.2 chr18:36593175-39537209(probes 1369936:1371635) chr18:36783539-37388942(probes 1370026:1370280) chr18:34571738-78077248(probes 1368632:1393267) 1.7033e-16 7.2764e-06 Actual Copy Change Given -0.35544 -0.84657 -0.59508 -0.56435 -0.80484 -0.013127 -1.2275 -0.15176 -0.62547 0.0015255 -0.22913 -0.35293 0.016985 -0.82236 -0.81597 -0.38806 -0.43366 -0.44124 -0.49036 -0.82497 -0.65557 -0.35316 -0.38716 -0.44594 0.0012481 -0.36295 -0.39556 -0.50484 -0.79995 -0.3044 -0.70118 -0.53612 -0.0019399 -0.90284 -0.01212 0 -0.84931 -0.56982 -0.44297 -0.58579 -0.71871 0.0011093 0.030169 -0.34733 0.031602 -1.0588 -0.24946 -0.004327 0.20188 -0.16665 0.0016642 -0.010094 -1.0281 -0.0012473 0.0047818 -0.78488 -0.50287 -0.37797 -0.55551 -0.28215 0.0039075 -0.52614 -0.55847 -0.68997 0.010749 0.0010211 0.0051359 -0.60694 -0.011611 -0.00041585 -0.79411 0.0060118 -0.79234 -0.68888 -0.51108 -0.4044 -0.79519 -0.005814 -0.67884 0.0029133 -0.0016629 -0.73177 -0.83575 -0.30291 -0.023154 -0.65938 -0.72459 0.013312 -0.75248 -0.75991 -0.73389 -0.52851 -0.4735 0.00055459 -0.0013858 -0.33179 -0.022898 -0.75572 -0.90426 -0.52849 -0.89775 -0.66883 -1.1133 -0.0042929 0.68309 -1.13 -0.81057 0.0037465 -0.66842 0.0066653 -0.57312 -0.77145 0.025531 -0.55653 -0.014916 -0.277 -0.8041 -0.74807 -0.85955 -0.48921 0 -1.1469 -0.00035971 -0.48701 -0.0123 0.075991 0.25527 0.015727 -0.0020784 0.00013863 -0.68962 -0.019863 0.0039353 0.0041632 -0.36488 -0.47433 -0.52205 -0.87303 -0.0022168 -0.4804 -0.76058 -0.08413 -0.89235 -0.00063452 0.012795 0.0084422 -0.43349 -0.73876 -0.70585 -0.0020784 -0.65799 -0.6122 -0.53527 -0.66935 -0.7302 -0.49996 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-0.30287 -0.0099349 -0.0029091 -0.34205 -0.046718 -0.70423 -0.42506 0.019503 0.32624 -0.62655 -1.0847 -0.020824 -0.7977 -0.0096806 -0.43036 -0.87723 -0.34962 -0.0036011 -0.0083005 -0.42495 -0.019863 -0.40052 0.0052749 0.00027728 -0.011198 -0.84879 -0.012162 -0.4627 -0.23398 -0.0023553 -0.021352 -0.0059522 -1.0149 -0.007472 -0.00072855 -0.0042879 0.0055529 -0.47184 -0.0030475 -0.61825 -0.48491 -0.3923 -0.62499 -0.35718 -0.039394 -0.52154 -0.093403 0.0013868 -0.89366 -0.085953 -0.7257 -0.40418 -0.0035123 -0.0048565 -0.71506 -0.42231 -0.73082 -0.51496 -0.011473 0 -0.60642 -0.72096 0.34258 -0.75253 -0.0038779 -0.089037 -0.42309 -1.2929 -0.2097 -0.46887 -0.71479 -0.96136 -0.63121 -0.91687 -0.84074 -0.77277 -0.28798 -0.00055444 0.33755 -0.81823 -0.70226 0.00021672 0.0093385 -0.41014 -0.014778 -0.65267 -0.23435 0.45564 -0.5712 -0.60361 -0.0041546 -0.92802 -0.57447 -0.38246 -0.47416 -0.0036011 0.26671 -0.14592 -0.0059522 -0.0062286 -1.2929 -0.015741 -0.010922 -0.68483 -0.57705 -0.80401 -0.80476 -0.50235 -0.76475 -0.71577 -0.7692 -0.18216 -0.74734 -0.90114 -0.0099565 -0.0049844 -0.73923 -0.80295 -0.98727 -0.80443 0.0094491 -0.85464 -0.0048461 0.0013868 -0.66605 2.0722 -0.49308 -0.58078 -0.85488 -0.55377 0.00597 -0.39419 0.034254 -0.066089 -0.56019 -0.48239 -0.30897 -0.53523 0.042166 -0.5293 -0.58373 -0.45608 -0.0029091 -0.0077482 -0.75687 -0.44102 -0.21775 -0.52726 0.90674 -0.0063668 -0.47857 -0.0037395 -0.73345 -0.48323 -0.0052985 -0.44588 -0.38929 -0.79561 -0.51825 -0.77388 -0.0076101 -0.0012473 0.0023581 -0.0019399 0 -0.0019399 -0.27308 -0.47923 -0.136 -0.0091399 -0.42476 -1.1162 -0.6601 -0.0013858 0.48773 -0.010922 -1.0949 -0.6257 -0.6883 -0.85837 -0.04442 -0.93364 -0.84411 -0.0027707 -0.83986 -0.64177 -0.85146 -0.78294 -0.0034627 Deletion Peak 39 - CN values 18q21.2 chr18:48472083-48650073(probes 1377277:1377440) chr18:48491525-48616860(probes 1377280:1377435) chr18:34571738-78077248(probes 1368632:1393267) 2.7064e-27 9.3492e-21 Actual Copy Change Given -0.35544 -1.2929 -0.59508 -0.78463 -0.81851 -0.013127 0.031859 -0.15176 -0.62007 0.0015255 -0.69776 -0.36488 0.016985 -0.82611 -0.81597 -0.38806 -0.43366 -0.44124 -0.49036 -0.8309 -0.65557 -0.35316 -0.39096 -0.44594 0.0012481 -0.36295 -0.39556 -0.50484 -0.79995 -0.3044 -0.71039 -0.53612 -0.0019399 -0.90284 -0.4141 0 -0.84931 -0.56982 -0.44297 -0.59 -0.71871 0.0011093 0.031999 -0.36034 0.031602 -0.5896 -0.24946 -0.004327 -0.20821 -0.16665 0.0016642 -0.010094 -0.65165 -0.0012473 0.0033927 -0.78488 -0.48858 -0.37797 -0.54849 -0.29023 0.0039075 -0.52614 -0.56035 -0.68997 0.010749 0.0023581 0.0051359 -0.60694 -0.011611 -0.00041585 -0.79411 0.0060118 -0.79234 -0.68888 -0.51108 -0.4044 -0.79519 -0.0037395 -0.67884 0.0029133 0.0097276 -0.73177 -0.83575 -0.31777 -0.023154 -0.65938 -0.68519 0.013312 -0.75248 -0.75991 -1.2929 -0.52851 -0.4735 0.00055459 -0.0013858 -0.33179 -0.022898 -1.0059 -0.90426 -0.52849 -1.2929 -0.66883 -1.1133 0.0084743 -1.2929 -1.1342 -0.81057 -0.0038779 -0.66842 0.0066653 -0.56902 -0.77145 0.025531 -0.55653 -0.0080244 -0.277 -0.8041 -0.74807 -0.85955 -0.48921 0 -0.52194 -0.00035971 -0.48701 -0.0123 0.075991 0.25527 0.015727 -0.0020784 0 -0.68962 -0.019863 0.00013863 0.0041632 -0.36488 -0.73368 -0.52205 -0.86216 -0.0022168 -0.49362 -0.75124 -0.0067565 -0.89243 0.0038051 0.012795 0.0084422 -0.43349 -0.73052 -0.70585 -0.0020784 -0.65799 -0.61374 -0.53527 -1.2668 -0.7302 -0.49996 -0.00093199 -0.085041 -0.68742 -0.58558 0.00013863 0.01566 0.0013868 -0.73042 -0.58878 -0.56555 0.069095 -0.54087 -0.58157 -0.89511 -0.95663 -0.81682 -0.57486 -0.013696 -0.96236 -0.34491 -0.0082853 0 -0.74072 -0.0095426 -0.015054 -0.01037 -0.63434 0.00077289 -0.42287 -0.006505 -0.81222 -0.0051983 -0.010282 -0.0045695 -0.72668 -0.018725 -0.85122 -0.96767 -0.73722 -0.0044312 -0.61834 -0.50148 -0.36215 -0.68906 -0.016292 -0.0036011 -0.56186 -0.014206 -0.0087146 -0.0013858 -0.93526 -0.75167 -0.0015243 -0.47333 -0.87729 0.78766 -0.0033243 -0.046312 -0.81696 -1.0046 -0.56904 -0.81256 -0.62984 -0.0022168 -0.49641 0.0027961 -0.0014789 -0.38201 0.17392 -0.021784 -0.40628 -0.010719 -0.42462 0.00069327 -0.67265 -0.256 -0.29893 -0.0051227 -0.66133 0.0084743 -1.2929 -0.73199 -0.0012473 -0.85146 -0.0042929 -0.44964 0 -0.66012 0.57791 -0.0088526 -0.62303 -0.42474 -0.79842 0.0020885 -0.45493 -1.1579 -0.0069195 0.00070211 -0.0089906 -0.83731 -0.0056757 -0.40804 -0.85575 -0.7868 -0.5223 -0.31937 -0.30287 -0.0099349 -0.0029091 -0.34033 -0.046718 -0.70423 -0.42506 -0.75935 -0.44081 -0.62655 -0.55096 -0.020824 -1.1208 -0.0096806 -0.43036 -0.87723 -0.34962 -0.0033243 -0.0083005 -0.42495 -0.019863 -0.40052 0.0052749 0.00027728 -0.011198 -0.84879 -0.012162 -0.4681 -0.23398 -0.0023553 -0.0044161 -0.0059522 -0.4847 -0.007472 -0.00072855 -0.0042879 0.0055529 -0.47184 -0.0030475 -0.6193 -0.48491 -0.38257 -0.62499 -0.34698 0.35267 -0.52154 -0.090758 0.0013868 -0.89366 -0.085953 -0.7257 -0.40418 -0.0035123 -0.0048565 -0.71506 -0.42231 -0.73082 -0.51496 -0.011473 0 -0.60642 -0.72096 0.34258 -0.75253 -0.0038779 -0.94408 -0.42309 -0.66901 -0.2097 -0.46887 -0.71479 -0.96136 -0.63121 -0.91687 -0.84074 -0.77277 -0.28976 -0.00055444 -0.62379 -0.81823 -0.70226 0.00021672 0.0093385 -0.41014 -0.014778 -0.65267 -0.23435 0.45564 -0.5712 -0.60361 -0.0041546 -0.94585 -0.57447 -0.38246 -0.47416 -0.0036011 0.26671 -0.57989 -0.0059522 -0.0062286 -1.2034 -0.015741 -0.010922 -0.68675 -0.57705 -0.82189 -0.80476 -0.84106 -0.76475 -0.71577 -0.78007 -0.13056 -0.74734 -0.90114 -0.0099565 -0.0049844 -0.73923 -0.80295 -1.024 -0.80443 0.0094491 -0.85464 -0.64593 0.0013868 -0.66605 -0.86798 -0.49308 -0.80476 -0.85488 -0.56416 0.00597 -0.40196 0.034254 -0.066089 -0.56019 -0.48239 -0.30897 -0.54451 -0.72296 -0.5293 -0.58373 -0.70235 -0.0029091 -0.0073339 -0.75687 -0.44102 -0.21775 -0.52726 -0.12382 -0.0063668 -0.47857 -0.0037395 -0.73345 -0.48323 -0.0052985 -0.8882 -0.38929 -0.78218 -0.52022 -0.77388 -0.0076101 -0.0012473 -0.88789 -0.0019399 0 -0.0019399 -0.27308 -0.47923 -0.136 0.0013868 -0.42476 -1.1135 -0.6601 -0.0013858 -0.15673 -0.022253 -1.0949 -0.6257 -0.6883 -0.85837 -0.043059 -0.95337 -0.84411 -0.0027707 -0.59097 -0.64631 -0.86664 -0.80401 -0.0034627 Deletion Peak 40 - CN values 18q22.1 chr18:63200038-67073349(probes 1386625:1388412) chr18:66338558-66383463(probes 1387956:1387989) chr18:34571738-78077248(probes 1368632:1393267) 8.975e-18 0.0035391 Actual Copy Change Given -0.36206 -0.85231 -0.59508 -0.78463 -0.81851 -0.013127 0.03031 -0.15176 -0.64497 0.0015255 -0.23545 -0.72668 -0.0032212 -0.82611 -0.81597 -0.38806 -0.44976 -0.46637 -0.49036 -0.82342 -0.65557 -0.35407 -0.40857 -0.44594 0.0012481 -0.36295 -0.39556 -0.50484 -0.79995 -0.3044 -0.71039 -0.53612 -0.0019399 -0.95652 -0.4141 0 -0.84931 -0.56982 -0.44297 -0.59 -0.71871 0.0084743 0.031999 -0.36034 0.031602 -0.63197 -0.24946 -0.004327 -0.20821 -0.16917 0.0016642 -0.010094 -0.65165 -0.0012473 0.0033927 -0.78488 -0.48858 -0.37797 -0.58593 -0.29023 0.0039075 -0.52614 -0.56035 -0.68997 0.010749 -0.0088526 0.0051359 -0.60694 -0.011611 -0.00041585 -0.79411 0.0060118 -0.79234 -0.68888 -0.51108 -0.4044 -0.79519 0.00041593 -0.67884 0.0029133 0.0097276 -0.73483 -0.83575 -0.31777 -0.023154 -0.65938 -0.71145 0.013312 -0.74142 -0.7695 -0.76124 -0.52851 -0.4735 0.00055459 -0.0013858 -0.33179 -0.033849 -1.0933 -0.93202 -0.52849 -0.92793 -0.6928 -1.1288 0.0084743 -0.78833 -1.1587 -0.83561 -0.0038779 -0.66842 -0.0088992 -0.56902 -0.77145 0.019643 -0.58048 -0.0080244 -0.277 -0.8041 -0.75576 -0.9157 -0.48921 0 -0.52194 -0.00035971 -0.48701 -0.0123 0.075991 0.25527 0.015727 -0.0020784 0 -0.68962 -0.019863 0.00013863 0.0041632 -0.36488 -0.73368 -0.93437 -0.85914 -0.0076101 -1.2143 -0.76775 0.062794 -0.9038 0.0038051 0.02539 0.0084422 -0.43349 -0.74582 -0.70585 -0.72694 -0.65799 -0.64142 -0.55725 -1.27 -0.7302 -0.49996 -0.00093199 -0.085041 -0.68742 -0.58283 0.00013863 -0.013402 0.0013868 -0.73042 -0.6351 -0.56555 0.061508 -0.54087 -0.58157 -0.89511 -0.95663 -0.81682 -0.57486 -0.013696 -0.96236 -0.30345 -0.0082853 0 -1.2389 -0.0095426 -0.59682 -0.01037 -0.63434 0.00077289 -0.42287 -0.006505 0.00458 -0.012513 -0.010282 -0.0045695 -0.72668 -0.013264 -0.87215 -0.96767 -0.73722 -0.0044312 -0.61834 -0.88755 -0.36215 -0.69341 -0.016292 -0.0036011 -0.56186 -0.014206 -0.0087146 -0.0013858 -0.93526 -0.75167 -0.0015243 -0.47333 -0.87729 0.78766 -0.0033243 -0.046312 -0.81696 -1.0225 -0.56904 -0.81256 -0.62984 -0.0022168 -0.4767 0.0027961 -0.0014789 -0.38201 0.17392 -0.021784 -0.42676 -0.010719 -0.42462 -0.0081624 -0.67265 -0.27416 -0.29515 -0.0051227 -0.66133 0.0084743 -0.9374 -0.74577 0.0011093 -0.38694 -0.0042929 -0.44964 0 -0.66012 0.57791 -0.0088526 -0.0081624 -0.42474 -0.80358 0.0052749 -0.45493 -0.70289 -0.0069195 0.00070211 -0.0089906 -1.018 -0.0056757 -0.40804 -0.86118 -0.8074 -0.52041 -0.31937 -0.30287 -0.0099349 -0.0029091 -0.34033 -0.046718 -0.70423 -0.42506 -0.75935 -0.44081 -0.62655 -0.55096 -0.020824 -0.47215 -0.0096806 -0.43036 -0.87723 -0.34962 -0.0033243 -0.060614 -0.42495 -0.02151 0.069239 0.0052749 0.00027728 -0.011198 -0.84879 -0.012162 -0.4681 -0.23398 -0.0023553 -0.0044161 -0.0059522 -0.50629 -0.007472 -0.00072855 -0.0042879 0.0055529 -0.47184 -0.0030475 -0.6193 -0.48491 -0.38257 -0.62499 -0.35822 0.35267 -0.52154 -0.090758 -0.0060904 -0.89366 -0.085953 -0.7257 -0.40418 -0.0035123 -0.0048565 -0.71506 -0.44089 -0.73082 -0.51352 -0.011473 0 -0.60642 -0.72096 0.34258 -0.75253 -0.0038779 -0.94408 -0.42309 -0.9326 -0.2097 -0.46887 -0.71479 -0.96136 -0.63121 -0.91687 -0.84074 -0.78885 -0.28976 -0.00055444 -0.66702 -0.81823 -0.70361 0.00021672 -0.97962 -0.41014 -0.021098 -0.65267 -0.23435 0.45564 -0.5712 -0.60361 -0.0041546 -0.94585 -0.57447 -0.38246 -0.47416 -0.0036011 0.26671 -0.59993 -0.0059522 -0.0062286 -0.65193 -0.039954 -0.010922 -0.68675 -0.60725 -0.82189 -0.80476 -0.84106 -0.76475 -0.72671 -0.78007 -0.13056 -0.74734 -0.91086 -0.0099565 -0.0049844 -0.73923 -0.80295 -1.0136 -0.80443 0.0094491 -0.85464 -0.64593 0.0013868 -0.66605 -0.86798 -0.49308 -0.59575 -0.83276 -0.54199 0.00597 -0.40196 0.034254 -0.066089 -0.58081 -0.49011 -0.30897 -0.54451 -0.72692 -0.5293 -0.58373 -0.45747 -0.0029091 -0.0073339 -0.75687 -0.43804 -0.21775 -0.52726 -0.12382 -0.0063668 -0.47857 -0.0037395 -0.73345 -0.48323 -0.022332 -0.54007 -0.38929 -0.79611 -0.52022 -0.77388 -0.0076101 -0.002574 0.010006 -0.0019399 -0.018742 -0.0019399 -0.27308 -0.47923 -0.136 -0.0056757 -0.42476 -1.1316 -0.6601 -0.0013858 -0.14901 -0.022253 -1.0949 -0.6257 -0.6883 -0.85066 -0.043059 -0.93615 -0.84411 -0.0027707 -0.59097 -0.65731 -0.87256 -0.78937 -0.0034627 Deletion Peak 41 - CN values 19p13.3 chr19:1033227-1907478(probes 1393386:1393547) chr19:1517293-1537245(probes 1393499:1393502) chr19:1-5160912(probes 1393268:1394395) 7.5925e-05 7.3024e-05 Actual Copy Change Given 0.10655 -0.8393 0.48798 0.072827 0.020771 -0.015604 0.022444 -0.052061 0.23783 -0.0012473 0.025952 0.21253 -0.030404 -0.024935 -0.06652 0.27111 -0.00013862 0.35888 -0.0123 0.22823 -0.027808 -0.013264 -0.064374 -0.32371 -0.049695 0.17305 0.25255 0.014749 0.032986 0.24778 -0.028901 -0.015886 -0.0081624 0.06208 -0.045093 0.016705 0.024408 0.46127 -0.0059522 0.065942 -0.041024 -0.005814 -0.33514 0.17121 0.021488 0.0022193 -0.26913 0.018209 -0.0096806 0.3206 -0.072942 -0.0084385 0.011261 -0.012438 -0.012927 -0.75823 0.76044 0.0059157 -0.042437 0.012237 -0.031632 -0.061286 -0.012162 -0.022469 -0.082137 -0.11037 -0.042924 0.03011 -0.0060904 -0.018216 -0.043568 -0.036045 -0.36748 0.089851 0.40838 -0.032178 -0.0094046 -0.028901 -0.021373 -0.0085766 -0.049511 -0.021098 -0.016979 -0.066698 0.033409 -0.13264 -0.66499 -0.020824 0.094346 -0.031157 0.020906 -0.46762 -0.0088115 -0.015054 -0.021235 -0.88943 0.011958 0.045849 0.021884 -0.14181 -0.056173 0.45173 -0.50973 -0.0084385 -0.030267 -0.99834 0.029297 -0.024798 -0.017755 -0.032041 -0.014366 0.01539 -0.025209 -0.013264 0.022024 0.41262 0 -0.22779 0.037359 0.0041632 0.051956 -0.091023 -0.017885 0.25574 -0.0044312 0.024127 -0.011865 0.27854 0.40928 0.61371 0.0071972 -0.082633 -0.020687 -0.012713 0 -0.4855 -0.49902 -0.073986 -0.046583 -0.09342 0.013213 -0.1431 -0.093799 -0.0096922 -0.042517 0.018943 -0.067925 0.73633 -0.10473 -0.040616 -0.30815 -0.16866 -0.50823 0.022343 -0.67866 -0.052261 -0.017353 0.001683 0.055706 -0.5442 -0.0020784 0.0028116 -0.0069195 -0.68784 0.0013868 -0.027671 0.13954 -0.080398 0.015688 -0.47385 0.11239 0.041138 0.18223 -0.032605 -1.0024 -0.030677 -0.028625 -0.0040162 -0.010232 0.58524 0.44037 -0.034704 0.06069 0.00016713 0.038913 0.040044 -0.081605 0.029389 -0.020353 -0.78698 0.17784 0.011539 0.025812 -0.029448 1.0627 -0.039394 0.0088382 -0.017888 -0.3031 -0.00069303 -0.13264 0.023987 -0.010646 -0.026714 0.011121 -0.022827 -0.051856 -0.27356 -0.014778 -0.43333 0.049824 0.002715 -0.0012473 0.75846 -0.083598 -0.8544 0.044186 0.0025724 0.58335 -0.039122 -0.31494 -0.01904 -0.010877 0.026373 -0.00013862 0.0011093 -0.005261 -0.012713 -0.020549 -0.0060904 0.17905 -0.2102 -0.024737 -0.016841 -0.30016 -0.03245 0.64378 0.31466 0.0041632 0.048546 0.00041593 -0.19162 -0.02384 0.042024 -0.22293 0.0049969 -0.011611 -0.081738 -0.022744 -0.038714 0.31398 -0.022881 -0.020138 -0.052936 0.074265 0.025617 0.025812 -0.12291 -0.074945 0.033127 -0.16739 -0.011198 0.71039 0.032726 -0.020149 0.026373 -0.0087146 0.19743 -0.025893 0.23721 -0.016567 0.073402 -0.056442 0.19938 0.060365 0.028481 -0.41289 0.0096688 0.078871 -0.01106 -0.038986 0.26388 0.017404 -0.39986 0.38155 -0.013677 -0.06719 -0.74643 -0.0029091 0.36068 0.20916 -0.02151 0.006109 -0.030404 0.10249 -0.026851 -0.025107 -0.020682 -0.083067 0.47135 -0.028628 -0.082934 0.054803 0.17887 0.14906 -0.011611 -0.069064 0.021463 0.68533 0.017684 0.46228 0.14791 0.0020805 0.025531 0.51089 -0.017814 0.21945 0.11023 -0.028218 0.5539 -0.010646 0.0062481 -0.67132 0.055738 -0.010508 -0.050235 -0.010094 -0.17702 0.17272 -0.023977 0.04259 -0.19825 -0.057116 -0.39908 0.017963 0.27222 0.69914 0.045991 -0.30909 -0.020542 -0.033195 -0.045297 -0.23374 0.024627 0.31883 0 -0.12616 0.023557 0.011539 0.0077783 -0.54593 0.021183 -0.02384 -0.47578 -0.012713 -0.022606 -0.0029091 -0.021784 -0.044009 0.090285 -0.023429 -0.035448 0.20457 -0.006505 -0.10749 -0.048342 -0.015741 0.048404 0.028481 -0.0013858 -0.031632 0.044715 0.041741 -0.026652 -0.11757 -0.87673 -0.034311 0.0069435 -0.0034627 -0.095898 -0.015078 -0.016567 0.0016642 0.011121 0.49372 0.017397 -0.050776 -0.023155 -0.024251 -0.055364 0.072396 -0.62703 -0.037762 0.00597 0.055373 0.024158 -0.030845 -0.017529 0.029044 0.0069435 -0.38078 0.053237 -0.016979 -0.041159 -0.019726 0.022585 0.010285 -0.39363 -0.20958 -0.0011087 0.45428 0.0041632 0.0062481 0.0058309 0.016146 0.016705 -0.015466 0.21837 0.30585 -0.025346 -0.012576 -0.29236 0.29421 -0.0045695 -0.0020784 -0.007472 -0.0030475 -0.022469 0 0.071535 0.13495 0.0079175 -0.0085363 -0.45802 0.081931 -0.014228 -0.0042929 -0.047801 0.018663 0.30825 -0.030216 0.0659 0.41881 -0.0073339 -0.049965 -0.012989 0.34648 -0.20473 -0.81515 -0.014228 0.0023581 Deletion Peak 42 - CN values 20p12.1 chr20:14301156-15274325(probes 1425703:1425930) chr20:13965126-16036135(probes 1425538:1426651) chr20:1-17164920(probes 1416965:1427679) 3.768e-42 3.768e-42 Actual Copy Change Given 0.71476 0.82001 -0.00056965 0.62958 -0.8126 -0.006505 -0.061555 2.3974 0.71152 -0.00069303 0.26702 0.93956 0.017963 -0.25998 0.019923 1.5749 0.84337 0.7149 0.52223 0.87428 -0.0037024 0.043582 0.31145 0.27422 -0.011611 1.5394 -0.34059 0.46874 0.021603 0.0034687 2.4719 -0.44146 0.0041632 -0.66485 0.012934 0.0072217 -0.83801 -0.49235 0.66567 0.056655 -0.73976 0.0015255 0.79413 -0.76132 0.27871 -0.11124 -0.25201 1.4166 0.010564 0.038489 0.0048579 -0.00041585 0.46724 -0.0011087 0.0029385 0.90875 -0.087311 1.8696 1.062 0.41446 0.0015255 1.9914 0.017544 -0.69938 -0.013677 0.67783 -0.016979 0.35162 0.65387 -0.005261 -0.81745 -0.010975 -0.80252 0.047694 -0.023886 -0.0059522 -0.015191 0.0034687 -0.046718 -0.014228 -0.033132 0.64543 -0.84499 0.8221 0.70795 -0.69135 -0.70724 -0.96939 0.77714 -0.094397 0.97791 0.58377 -0.46931 -0.0044312 0 0.75261 0.93976 0.0090312 -0.42484 1.2644 -0.01409 -0.63614 0.52551 -0.0059522 0.011852 0.73303 1.4359 0.0077783 0.88291 0.71622 0.0040243 0.60435 0.0040243 -0.55457 0.28074 2.7374 0.93 0.77743 -0.80931 0.88546 0.77949 -0.75676 0.0053312 1.5504 0.0079175 0.0052284 0.52083 0.038065 -0.019726 0.71697 -0.68325 -0.034768 0.0024969 -0.0037395 0.36477 -0.48592 0.74746 0.81926 0.54541 1.2987 0.11697 0.0087528 0.52118 -0.0017429 -0.00013862 -0.59549 1.36 1.074 -0.039529 0.0024969 0.25308 -0.59283 0.45977 0.033165 0.74803 0.21776 -0.0017632 0.064387 0.50811 0.96681 0.00027728 0.01447 0.019083 -0.70984 -0.54492 1.0684 -0.263 1.6341 1.664 0.11052 1.9523 1.9533 1.6976 0.0073421 0.98928 0.84814 0.77618 0.60124 0.75127 0.059937 1.9188 -0.011473 -0.6295 0.0081413 -0.40119 0.0041632 0.85838 1.1367 0.12029 -0.032587 -0.72013 -0.016841 0.10351 0.74956 1.3978 -0.005814 0.0081959 1.8636 0.31257 -0.69821 1.7503 0.90392 -0.57002 -0.0044312 -0.94371 0.018803 0.013772 0.92411 0.0013868 0.4844 -0.79978 -0.00033671 0 0.80344 0.47856 -0.98541 0.62839 1.6363 -0.063242 0.0054139 1.1905 0.80344 0.0014323 -0.37595 0.51978 0.57273 -0.018765 -0.005814 0.35904 0.20427 0.82686 0.7372 0.28255 -0.0070576 -0.65873 0.0024969 2.0994 -0.057116 0.014609 0.88826 0.0087528 0.90351 0.38138 -0.39363 0.067805 -0.00055444 0.010842 1.2971 0.85363 0.13865 0.75505 -0.33087 -0.005261 -0.0060904 0.30873 0.063454 0.030873 0.29899 0.78485 0.0066653 0.26954 -0.1651 0.015447 0.81848 -0.006505 0.43986 0 2.4531 -0.22539 -0.58373 0.67289 -0.61556 -0.031632 0.27222 1.4259 0.0086298 0.98535 1.581 0.80967 0.00458 0.072971 1.5509 0.22808 -0.40852 0.46092 0.0030522 0.0057066 0.77607 -0.0018014 -1.0292 1.2188 -0.00069303 0.0038854 0.034818 -0.50921 0.00027728 -0.0015599 0.44953 -0.022195 0.94078 -0.0016629 0.23938 0.040185 0.38024 0.85336 -0.36624 0.49649 -0.52757 -0.039122 -0.0029091 1.065 0.12113 1.3272 0.99987 0.98618 -0.0023656 0.7982 -0.12043 0.75269 1.3515 0.010842 -0.3592 -0.62751 -0.72265 0.25402 0.23876 0.0022193 -0.032587 -0.35922 1.386 0.29345 0.03214 0.039195 0.84356 0.31835 0.4326 -0.18005 -0.80202 0.27995 -0.005261 0.63956 -0.01416 -0.23655 -0.29762 0.021884 0.0043021 0.0069435 -0.049424 0.47255 -0.0012473 0.016286 0.19832 0.34518 1.2975 0.72697 -0.039529 1.2625 0.00041593 0.24793 -0.18861 0.00055459 -0.0053992 -0.23875 0.56596 -0.19462 0.15906 -0.58882 -0.66681 -0.78648 -0.84979 -0.39853 0.93589 0.057226 0.76274 0.6513 -0.89227 0.0070826 0.0043021 0.69503 0.33996 0.53389 -0.33468 0.0019418 -0.85757 1.2179 0.068235 -0.050235 -0.018216 0.44257 0.71415 1.8182 -0.0019399 0.00097064 0.40544 0.23938 0.037531 0.26306 0.00427 -0.27224 -0.25067 -1.2929 -0.76381 -0.58823 0.4463 -0.013677 0.62133 0.67067 -0.47923 1.2003 -0.53632 -0.034223 -0.0027707 -0.035312 0.00097064 -0.042517 0.45547 0.0067004 1.5127 1.3846 0.75356 -0.51835 0.98597 -0.25152 0.00597 0.24684 0.19725 0.0044411 -0.00055444 0.30825 0.31402 0.45207 0.0036076 1.5547 0.080572 -0.65134 0.00055459 0.024127 0.35708 0.53432 2.2129 -0.69691 1.8982 0.47787 0.89554 -0.83962 0.0080567 -0.082934 -0.66365 -0.8635 -0.79911 0.0012481 Deletion Peak 43 - CN values 21q11.2 chr21:1-26470028(probes 1453978:1460720) chr21:1-15377835(probes 1453978:1453978) chr21:1-24936912(probes 1453978:1459629) 9.899e-05 0.00010149 Actual Copy Change Given -0.014503 0.010006 0.56559 -0.12655 -0.77549 -0.028355 0.058652 -0.22722 -0.23423 -0.014778 -0.23726 -0.00013862 0.021323 -0.044551 -0.64424 -0.015466 -0.044009 0 -0.089567 -0.052801 -0.6235 0.0054139 -0.022058 0.0017664 -0.014503 0.12064 -0.40796 0.029882 -0.032723 0.00055459 -0.39475 -0.0081692 -0.0088526 0.84475 -0.4292 -0.70172 -0.09089 -0.48397 -0.0023553 0.021884 0.00055459 -0.0076101 -0.045499 -0.029584 -0.06368 -0.19174 -0.2913 -0.030437 -0.80335 -0.17411 0.00041593 -0.0038779 -0.27571 -0.0031859 0.0053377 -0.78883 0.021884 -0.36352 -0.56285 -0.017666 0.0020805 -0.021921 0.0094491 0.0052749 -0.0073339 -0.0012473 -0.013402 -0.11331 -0.007472 -0.0008316 -0.78151 -0.0072488 -0.39536 0.024408 -0.5085 0.033127 -0.0022168 -0.020687 -0.67674 -0.0048461 -0.016567 -0.49371 -0.85923 -0.010002 -0.055991 -0.78437 -0.013747 -0.0042929 -0.76235 0.007845 -0.017663 -0.96533 0.32001 -0.012713 -0.005814 -0.11535 -0.0018014 -0.75279 -0.0026322 0.064368 -0.0029091 -0.8005 -0.041874 -0.024114 -0.0024938 0.084643 -0.054717 -0.0020784 0.1503 -0.0062286 0.49735 -0.0019967 -0.010094 -0.020412 -0.013677 -0.2885 -0.31548 -0.26847 -0.0092666 -0.48712 -0.00227 0.040892 -0.005758 -0.47881 -0.017254 -0.034091 -0.26973 0 0.052241 -0.037082 0.0028889 -0.054555 -0.010094 -0.013264 -0.37324 -0.01884 -0.51897 -0.85796 -0.023018 -0.0048991 -0.75392 -0.0075072 -0.03749 -0.019394 -0.0019399 -0.027945 -0.41814 -0.039067 -0.7106 -0.014447 -0.33629 -0.1508 -0.13584 -0.022295 -0.26091 -0.2531 -0.014465 -0.057681 0.084209 -0.54733 0.0066653 -0.0013858 0 0.0061731 -0.58117 0.027778 -0.35544 -0.53205 -0.0044312 0.094782 0.037464 -0.020037 -0.0083401 -0.0048648 0.023286 -0.06048 -0.0094016 -0.00069303 -0.36102 -0.0041546 -0.68915 -0.0041546 0.018523 -0.0028813 -0.016704 -0.020271 -0.0078813 -0.92126 -0.0065548 -0.16052 -0.29248 0.0055529 -0.015329 0.015028 -0.85496 -0.0047079 0.0030522 -0.49367 -0.10158 -0.69197 -0.0073339 -0.0032522 -0.56037 -0.0060904 0.0098669 -0.00097017 0.013632 0.069956 0.00097064 0.089706 0.87647 -0.56041 0.0036076 -0.27918 -0.00097017 -0.99046 -1.1165 -0.0072588 -0.28994 -0.0013858 -0.4846 -0.0036011 -0.0094974 -0.0038779 -0.0081624 -0.018078 0.0040243 -0.0051227 -0.44102 -0.0013858 0.09333 -0.70792 -0.040692 0.013772 -0.12137 -0.75943 -0.1517 0.024408 -0.0029091 -0.19149 -0.00097017 -0.16103 -0.4643 0.033972 0.11213 -0.0019399 -0.00097017 -0.097167 -0.3847 -0.44695 -0.023187 -0.0044312 -0.0123 -0.0040162 -0.038442 -0.0043461 0.024127 -0.71595 0.070386 0.0040243 -0.1458 -0.022058 0.65812 -0.044665 -0.005261 -0.14631 0.0019418 -0.25828 -0.22379 -0.015191 -0.34079 0.42923 -0.56216 0.15965 -0.35099 0 -0.41992 0.0018832 -0.32542 -0.0008316 -0.081472 -0.011792 0.00027728 -0.048748 -0.0027707 0.0058309 -0.028355 -0.2327 -0.0038779 -0.46238 0.28628 0.0013868 -0.0096806 -0.0059522 -0.58921 -0.0066432 -0.012901 -0.49527 -0.017529 0.010564 -0.0060904 -0.61786 -0.47459 -0.16407 0.06185 -0.33128 0.29326 -0.022058 -0.47491 0.00041593 -0.22466 -0.076105 -0.19937 0.24466 -0.013264 -0.02056 -0.37403 -0.41344 0.00069327 -0.023703 -0.0077482 0.0029133 0.054794 -0.57479 -0.0055375 0.036088 -0.005261 0.016425 -0.062226 -0.53622 -0.20933 0.01447 -0.075478 -0.44652 -0.022469 0.72678 0.0033972 0.0086135 0.0095883 -0.0016629 -0.31447 -0.0090605 -0.65947 -0.012773 -0.0016629 0.011679 -0.027261 -0.026851 -0.0696 -0.020687 0.0044411 0.24747 -0.0048461 -0.41388 -0.5851 -0.71408 -0.49089 -0.005814 -0.023429 -0.2201 0.008892 -0.025072 -0.63746 -0.01106 -0.030131 -0.0041546 -0.016292 -0.039665 0.0073856 -0.84443 -0.27117 -0.07524 -0.5201 -0.11299 -0.030813 -0.89656 -0.0088218 -0.0023553 -0.00055444 0.13848 0.11365 -0.20523 0.0086135 0.0062481 0.55248 0.0011093 0.0080567 -0.012438 0.43311 -0.065313 -0.37909 0.003191 -0.0047079 0 -0.012576 -0.18619 -0.20476 0.0041632 -0.2843 -0.51681 -0.33295 0.0044411 -0.17992 -0.46398 -0.0089906 -0.06936 -0.016567 -0.56137 0.29151 -0.0047813 0.51194 -0.0023553 -0.020275 0.0027745 -0.015329 -0.055903 -0.012851 0.045849 0.003191 -0.38493 -0.51063 -0.37302 -0.16841 -0.0018014 0.00083195 -0.0062286 -0.0062286 -0.0041635 -0.17967 -0.45907 -0.0048461 0.0013868 -0.44031 -0.025237 0.52822 -0.0078863 -0.47141 -0.022606 0.0012481 -0.63693 -0.014452 -0.81737 0.9233 -0.021373 -0.014778 -0.0018014 0.32205 0.27995 -0.86176 0.061222 -0.010714 Deletion Peak 44 - CN values 22q13.32 chr22:48668761-51304566(probes 1490636:1491119) chr22:48883082-49288257(probes 1490825:1491089) chr22:49067526-49108537(probes 1490940:1490961) 0.00060241 0.00057513 Actual Copy Change Given -0.030677 -0.83978 -0.0096309 -0.39063 -0.38906 0.0065437 -0.25067 -0.10007 -0.60371 -0.068313 0.024054 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