Unique Name	Descriptor	Wide Peak Limits	Peak Limits	Region Limits	q values	Residual q values after removing segments shared with higher peaks	Broad or Focal	Amplitude Threshold	TCGA-FA-8693-01A-11D-2389-01	TCGA-FA-A4BB-01A-11D-A31W-01	TCGA-FA-A4XK-01A-11D-A31W-01	TCGA-FA-A6HN-01A-11D-A31W-01	TCGA-FA-A6HO-01A-11D-A31W-01	TCGA-FA-A7DS-01A-11D-A381-01	TCGA-FA-A7Q1-01A-11D-A381-01	TCGA-FA-A82F-01A-11D-A381-01	TCGA-FA-A86F-01A-11D-A381-01	TCGA-FF-8041-01A-11D-2209-01	TCGA-FF-8042-01A-11D-2209-01	TCGA-FF-8043-01A-11D-2209-01	TCGA-FF-8046-01A-11D-2209-01	TCGA-FF-8047-01A-11D-2209-01	TCGA-FF-8061-01A-11D-2209-01	TCGA-FF-8062-01A-11D-2209-01	TCGA-FF-A7CQ-01A-11D-A381-01	TCGA-FF-A7CR-01A-11D-A381-01	TCGA-FF-A7CW-01A-11D-A381-01	TCGA-FF-A7CX-01A-12D-A381-01	TCGA-FM-8000-01A-11D-2209-01	TCGA-G8-6324-01A-11D-2209-01	TCGA-G8-6325-01A-11D-2209-01	TCGA-G8-6326-01A-11D-2209-01	TCGA-G8-6906-01A-11D-2209-01	TCGA-G8-6907-01A-11D-2209-01	TCGA-G8-6909-01A-11D-2209-01	TCGA-G8-6914-01A-11D-2209-01	TCGA-GR-7351-01A-11D-2209-01	TCGA-GR-7353-01A-11D-2209-01	TCGA-GR-A4D4-01A-11D-A31W-01	TCGA-GR-A4D5-01A-11D-A31W-01	TCGA-GR-A4D6-01A-11D-A31W-01	TCGA-GR-A4D9-01B-11D-A31W-01	TCGA-GS-A9TQ-01A-11D-A381-01	TCGA-GS-A9TT-01A-11D-A381-01	TCGA-GS-A9TU-01A-11D-A381-01	TCGA-GS-A9TV-01A-11D-A381-01	TCGA-GS-A9TW-01A-11D-A381-01	TCGA-GS-A9TX-01A-11D-A381-01	TCGA-GS-A9TY-01A-11D-A38W-01	TCGA-GS-A9TZ-01A-11D-A38W-01	TCGA-GS-A9U3-01A-11D-A38W-01	TCGA-GS-A9U4-01A-11D-A38W-01	TCGA-RQ-A68N-01A-11D-A31W-01	TCGA-RQ-A6JB-01A-11D-A31W-01	TCGA-RQ-AAAT-01A-11D-A38W-01	TCGA-VB-A8QN-01A-11D-A381-01	
Amplification Peak  1	1q24.2  	chr1:168767360-169269008(probes 79074:79467)      	chr1:168768709-169268811(probes 79075:79466)      	chr1:120527362-216612109(probes 67535:108867)     	0.00011679	 0.00011679		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	1	0	0	0	0	1	0	1	0	0	0	0	1	0	0	0	0	2	0	1	0	1	0	0	0	0	1	0	1	0	0	1	2	1	0	0	0	0	0	1	0	1	0	0	0	2	1	
Amplification Peak  2	2p16.1  	chr2:61104986-61147244(probes 164103:164119)        	chr2:61105060-61143203(probes 164104:164118)        	chr2:58198363-65710034(probes 162242:166350)        	1.0257e-14	 1.0257e-14		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	1	0	0	0	2	2	0	1	0	2	0	0	2	0	0	0	0	0	2	0	0	0	0	1	2	0	0	0	0	0	0	0	2	0	0	0	0	1	1	1	0	0	0	2	2	1	
Amplification Peak  3	3q27.3  	chr3:187616647-187814476(probes 360382:360523)    	chr3:187616779-187814401(probes 360383:360522)    	chr3:187453980-187914016(probes 360308:360611)    	0.0048479	   0.036969		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	2	0	2	0	0	1	1	0	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	1	0	1	0	2	0	0	0	1	1	0	0	1	0	1	0	0	0	
Amplification Peak  4	3q29    	chr3:195032857-196137763(probes 364927:365135)    	chr3:195039396-196132154(probes 364928:365134)    	chr3:195039396-196144844(probes 364928:365137)    	0.0048479	   0.011003		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	2	0	0	1	1	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	1	0	1	0	2	0	1	0	1	1	2	0	1	0	1	0	0	0	
Amplification Peak  5	5p13.1  	chr5:38366134-39217225(probes 489509:490087)        	chr5:38366531-39216824(probes 489510:490086)        	chr5:38366531-39220054(probes 489510:490089)        	0.13215	    0.13215		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	0	1	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	1	2	1	0	0	0	0	0	0	
Amplification Peak  6	7p22.3  	chr7:1-4925011(probes 663580:665195)                   	chr7:2072089-2100685(probes 663914:663922)            	chr7:2072089-2103667(probes 663914:663925)            	0.13215	    0.13215		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	2	0	1	0	0	2	0	0	1	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	2	1	1	1	0	1	0	1	0	1	0	0	1	2	0	1	0	0	0	0	0	
Amplification Peak  7	7q21.3  	chr7:68184133-126346892(probes 698602:727751)      	chr7:97008474-97016983(probes 712823:712827)        	chr7:97008474-97018233(probes 712823:712830)        	0.13215	    0.13215		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	2	0	1	0	0	1	0	0	2	0	0	0	0	0	2	0	1	0	1	0	0	0	0	0	0	0	0	1	1	0	1	0	2	0	1	0	0	1	1	0	0	0	0	0	1	0	
Amplification Peak  8	8q24.23 	chr8:112651328-146364022(probes 805654:825692)    	chr8:138319450-138390864(probes 822579:822631)    	chr8:126156755-146364022(probes 813935:825692)    	0.018626	   0.018626		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	1	0	2	0	1	1	2	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	2	0	0	0	1	1	0	1	1	1	0	0	0	0	
Amplification Peak  9	12q21.1 	chr12:44411331-78338797(probes 1072913:1092629)    	chr12:72172891-72288761(probes 1088946:1089006)    	chr12:71544675-74257795(probes 1088665:1090029)    	0.085003	   0.085003		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	1	0	0	1	1	1	0	1	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	0	0	1	1	1	0	0	1	0	1	0	
Amplification Peak 10	14q32.31	chr14:100781012-101872298(probes 1227378:1228043)	chr14:100787565-101872186(probes 1227379:1228042)	chr14:100787565-101872685(probes 1227379:1228045)	0.16999	    0.16999		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak 11	16p12.2 	chr16:23898225-23998888(probes 1283952:1284021)    	chr16:23900929-23997987(probes 1283953:1284020)    	chr16:23900929-24006904(probes 1283953:1284023)    	0.24013	    0.24013		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	1	0	0	0	1	2	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	1	1	0	0	1	0	0	0	
Amplification Peak 12	18q21.2 	chr18:48582939-78077248(probes 1377566:1393452)    	chr18:51697049-53379415(probes 1379579:1380475)    	chr18:51425223-53395147(probes 1379410:1380478)    	0.065049	   0.065049		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	2	0	1	1	0	1	0	0	2	1	0	0	0	0	2	1	2	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	2	2	0	1	0	0	0	1	0	0	0	1	0	
Amplification Peak 13	19q13.43	chr19:55709593-57052302(probes 1415559:1416169)    	chr19:56637492-57051286(probes 1415935:1416168)    	chr19:55735221-57052651(probes 1415560:1416171)    	0.017368	   0.017368		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	1	1	0	2	1	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	1	0	0	0	1	0	0	0	0	0	0	0	
Amplification Peak 14	Xq28    	chrX:120527235-155270560(probes 1538814:1553826)  	chrX:149265835-154883300(probes 1552028:1553812)  	chrX:149265835-154883633(probes 1552028:1553815)  	0.24013	    0.24013		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	1	1	0	0	0	0	0	1	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	
Deletion Peak  1	1p36.32 	chr1:1-48649489(probes 1:23925)                  	chr1:1-3821870(probes 1:308)                      	chr1:1-6962930(probes 1:2279)                     	0.011841	   0.056988		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	1	0	0	1	0	0	0	0	1	0	1	0	0	1	0	0	0	0	1	0	0	0	
Deletion Peak  2	1p13.1  	chr1:116959687-117120066(probes 65423:65505)  	chr1:117051820-117120066(probes 65488:65505)  	chr1:116521859-117666590(probes 65126:65856)  	0.00025614	 0.00048456		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	1	0	0	0	1	0	0	1	0	0	1	0	1	0	0	0	0	0	0	0	0	0	1	0	0	1	
Deletion Peak  3	1q43    	chr1:93485263-249250621(probes 51617:128612)   	chr1:242057541-242355431(probes 125801:125914)	chr1:223706994-249250621(probes 113583:128612)	0.0017831	  0.0017831		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	1	1	0	0	0	1	0	1	1	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	1	0	
Deletion Peak  4	2q23.1  	chr2:122489933-168731067(probes 192355:217170)	chr2:148775624-149276576(probes 205711:205929)	chr2:135695300-164375273(probes 198604:214690)	0.01124	   0.010679		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	1	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	1	0	0	0	
Deletion Peak  5	3p21.31 	chr3:42578769-50196417(probes 283394:287020)    	chr3:49500957-49588746(probes 286769:286789)    	chr3:49306893-49555232(probes 286705:286778)    	0.016959	   0.016959		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	1	0	0	0	1	1	0	
Deletion Peak  6	4q35.1  	chr4:167652787-191154276(probes 456799:467531)	chr4:185509761-186421723(probes 465992:466080)	chr4:179868034-191154276(probes 463265:467531)	0.037264	   0.039164		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	1	0	0	0	0	1	0	1	1	0	1	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	
Deletion Peak  7	5q33.3  	chr5:157281809-158744166(probes 553645:554625)	chr5:158121691-158529491(probes 554226:554493)	chr5:157546599-158577287(probes 553819:554521)	0.016959	   0.016959		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	
Deletion Peak  8	6p21.32 	chr6:31167499-33114170(probes 586701:586861)    	chr6:32933223-32955975(probes 586738:586743)    	chr6:30800327-32985198(probes 586530:586783)    	0.011841	   0.011841		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	1	1	0	0	0	
Deletion Peak  9	6q14.1  	chr6:76307902-111139036(probes 609088:628518)  	chr6:79642076-79792746(probes 610855:610914)    	chr6:76424899-140119909(probes 609138:645740)  	0.00024438	  0.0017831		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	1	0	1	0	0	1	0	0	1	0	1	0	0	0	0	0	1	1	0	0	1	0	1	0	0	0	0	0	0	1	0	1	1	0	0	0	1	0	1	0	0	1	1	0	1	0	
Deletion Peak 10	6q22.32 	chr6:96022438-139502638(probes 619569:645385)  	chr6:126175186-126670594(probes 636861:637106)	chr6:76424899-140119909(probes 609138:645740)  	0.00052595	   0.066287		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	1	0	1	0	0	1	0	1	0	1	0	0	0	0	1	0	1	1	1	0	0	0	0	1	0	0	1	1	0	1	1	
Deletion Peak 11	6q23.3  	chr6:137860913-138410514(probes 644311:644674)	chr6:138182417-138214040(probes 644553:644563)	chr6:76424899-140119909(probes 609138:645740)  	3.7765e-07	  0.0004679		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	1	0	1	0	0	0	0	1	0	1	1	1	0	0	1	0	1	0	0	1	1	1	1	1	
Deletion Peak 12	7q33    	chr7:117853365-159138663(probes 723226:744568)	chr7:134125919-134146459(probes 731967:731978)	chr7:134129751-134167132(probes 731970:731990)	0.03486	   0.033699		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	1	0	0	0	0	1	0	0	1	0	
Deletion Peak 13	8p23.2  	chr8:1-33334473(probes 744569:764140)             	chr8:2784419-4854274(probes 745337:746749)        	chr8:3544537-3546519(probes 746044:746045)        	0.15679	    0.15095		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	1	0	1	1	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	1	0	1	1	0	0	1	0	0	1	
Deletion Peak 14	8q12.1  	chr8:54623401-66555817(probes 772864:779999)    	chr8:59713200-60034328(probes 775979:776211)    	chr8:59868656-59872614(probes 776096:776097)    	0.021977	   0.020993		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	1	1	0	0	1	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	1	0	0	0	1	0	0	0	
Deletion Peak 15	9p21.3  	chr9:21931610-22448737(probes 839085:839420)    	chr9:21959052-21997722(probes 839107:839120)    	chr9:21550593-23517122(probes 838894:840080)    	3.3713e-22	 3.3713e-22		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	1	0	0	1	1	0	0	0	1	0	0	1	0	0	1	1	1	0	0	0	1	0	1	0	0	0	0	0	0	0	1	1	1	1	1	0	0	0	0	0	0	0	1	1	0	0	
Deletion Peak 16	10q23.31	chr10:90534760-91090085(probes 945991:946390)  	chr10:90561844-90612222(probes 946019:946071)  	chr10:89531347-91450250(probes 945261:946661)  	0.00048456	 0.00048456		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	1	0	1	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	
Deletion Peak 17	12p13.2 	chr12:1-22595769(probes 1050692:1063137)         	chr12:11795940-12048611(probes 1056389:1056720)	chr12:11712846-13986594(probes 1056344:1058004)	0.11856	    0.11368		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	1	1	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	
Deletion Peak 18	13q14.2 	chr13:48875329-49064807(probes 1142669:1142888)	chr13:48960484-49022512(probes 1142794:1142864)	chr13:48971579-49014333(probes 1142803:1142848)	0.016959	   0.016959		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	1	1	
Deletion Peak 19	15q21.1 	chr15:44953604-45026122(probes 1239903:1239938)	chr15:45001788-45013397(probes 1239917:1239926)	chr15:40473221-45423888(probes 1237931:1240013)	7.1625e-05	 7.1625e-05		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	0	0	1	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	1	0	1	0	1	1	0	0	1	0	0	0	0	0	0	1	0	0	
Deletion Peak 20	16p13.13	chr16:10910547-11030197(probes 1279196:1279292)	chr16:10970628-11030197(probes 1279241:1279292)	chr16:10910547-11010643(probes 1279196:1279274)	0.02587	   0.023682		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	1	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	
Deletion Peak 21	16q23.1 	chr16:78098006-79299841(probes 1306804:1307869)	chr16:78129058-79247026(probes 1306835:1307840)	chr16:78583258-78586506(probes 1307338:1307339)	0.13851	    0.13588		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	1	1	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 22	17p13.1 	chr17:1-62229443(probes 1314333:1341492)         	chr17:7458583-7523773(probes 1317406:1317425)    	chr17:7469079-7473456(probes 1317411:1317412)    	0.18166	    0.18999		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	1	0	0	1	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	1	1	1	1	0	0	1	0	1	1	
Deletion Peak 23	17q24.1 	chr17:62970616-63525081(probes 1341810:1342191)	chr17:63003700-63057650(probes 1341826:1341859)	chr17:62948574-63223948(probes 1341799:1341965)	0.013097	   0.013543		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	1	1	1	
Deletion Peak 24	19p13.2 	chr19:8000602-8118949(probes 1395719:1395756)    	chr19:8017820-8073463(probes 1395723:1395740)    	chr19:8042237-8053104(probes 1395732:1395733)    	0.032222	   0.031741		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	
Deletion Peak 25	19q13.2 	chr19:42567946-42801342(probes 1410632:1410695)	chr19:42634499-42732964(probes 1410655:1410679)	chr19:42598507-42805635(probes 1410641:1410696)	0.069338	   0.071351		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	1	0	0	0	0	0	
Deletion Peak 26	22q13.31	chr22:41635693-51304566(probes 1486323:1491312)	chr22:45585805-45650620(probes 1488710:1488744)	chr22:45613514-45617241(probes 1488728:1488729)	0.21158	    0.21158		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	1	0	1	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	
Amplification Peak  1 - CN values	1q24.2  	chr1:168767360-169269008(probes 79074:79467)      	chr1:168768709-169268811(probes 79075:79466)      	chr1:120527362-216612109(probes 67535:108867)     	0.00011679	 0.00011679		Actual Copy Change Given	0.0024969	0.25266	-0.0038779	-0.00055444	0.0049969	0.028035	0.86789	-0.049734	0.38651	-0.018765	-0.0088526	0.0062481	-0.0011087	0.82902	0.0282	0.01306	0.02539	0.0098669	1.0525	0	0.74255	0.001803	0.20564	0.00027728	-0.0018014	0	0.013213	0.56187	0.0054139	0.58218	0.013911	0.0011093	0.50654	1.5345	0.45912	0.020991	0.0055976	-0.017666	-0.016429	-0.014099	0.61661	-0.0031859	0.37573	0.037359	-0.30815	0.0079175	3.6569	0.51926	
Amplification Peak  2 - CN values	2p16.1  	chr2:61104986-61147244(probes 164103:164119)        	chr2:61105060-61143203(probes 164104:164118)        	chr2:58198363-65710034(probes 162242:166350)        	1.0257e-14	 1.0257e-14		Actual Copy Change Given	0.012516	0.0033299	0.36379	0.00069327	-0.18451	0.030708	0.93079	3.6569	-0.01849	0.37446	0.025671	3.6569	0.0114	-0.0058404	0.91299	0.0037432	0.0051359	0	0.0044411	-0.027808	2.7332	-0.0066432	-0.0012473	0.011121	0.0037465	0.74727	1.9622	0.010006	0.033408	0.0030522	-0.00097017	0.0038854	-0.0016629	0.0038854	0.95353	-0.00013862	0.010051	0	0.0040243	0.31306	0.48889	0.23117	-0.04011	0	0.014609	2.0281	3.6569	0.88046	
Amplification Peak  3 - CN values	3q27.3  	chr3:187616647-187814476(probes 360382:360523)    	chr3:187616779-187814401(probes 360383:360522)    	chr3:187453980-187914016(probes 360308:360611)    	0.0048479	   0.036969		Actual Copy Change Given	0.013632	0.00083195	0.98494	0.0066653	1.1381	0.035596	0.020886	0.26059	0.21115	-0.0026322	3.6569	0.010842	0.00078552	0.028481	0.011539	0.0073576	0.077574	0.014749	0.52748	-0.91845	0.00043911	0.0036076	-0.28834	0.0026357	0.012097	0	0.016985	0.51728	0.019363	0.0015255	0.66882	0.0038854	0.49787	0.026092	1.905	0.062651	0.019828	0.032281	0.19345	0.37397	0.069382	-0.26649	0.76863	0.0075	0.43665	0.019783	-0.30298	0.017264	
Amplification Peak  4 - CN values	3q29    	chr3:195032857-196137763(probes 364927:365135)    	chr3:195039396-196132154(probes 364928:365134)    	chr3:195039396-196144844(probes 364928:365137)    	0.0048479	   0.011003		Actual Copy Change Given	0.013632	0.00083195	0.026795	0.0066653	1.1381	0.035596	0.020886	0.26059	0.21115	-0.0026322	0.70513	0.010842	0.00078552	0.028481	0.011539	0.0073576	0.077574	0.042449	0.52748	0.042449	0.00043911	0.0036076	-0.28834	0.0026357	0.012097	0	0.016985	0.54224	0.019363	0.0015255	0.66882	0.0038854	0.49787	0.026092	1.6847	0.033831	0.53403	0.032281	0.19345	0.37397	3.6569	-0.26649	0.76863	0.0075	0.4158	0.019783	-0.30298	0.017264	
Amplification Peak  5 - CN values	5p13.1  	chr5:38366134-39217225(probes 489509:490087)        	chr5:38366531-39216824(probes 489510:490086)        	chr5:38366531-39220054(probes 489510:490089)        	0.13215	    0.13215		Actual Copy Change Given	-0.00041585	-0.00069303	-0.016017	0.00597	0.0024969	-0.006805	0.88104	3.6569	0.077718	0.36756	-0.028749	-0.01724	0.0026357	-0.0046485	-0.038444	-0.0044685	-0.026975	-0.011473	0	0.014609	-0.0038547	0.0037465	0.074696	0	0.0091705	0.0013868	0.48148	-0.0055375	-0.0022168	-0.01354	-0.02763	0	-0.012438	0.0058309	0.040327	0.014609	-0.012945	0.0049969	0.31626	0.12152	0.95468	0.51089	0.040853	-0.0015243	-0.0078964	0.008892	-0.34694	0.0056919	
Amplification Peak  6 - CN values	7p22.3  	chr7:1-4925011(probes 663580:665195)                   	chr7:2072089-2100685(probes 663914:663922)            	chr7:2072089-2103667(probes 663914:663925)            	0.13215	    0.13215		Actual Copy Change Given	-0.0041546	0.0073609	0.94527	0.00041593	0.76926	0.019199	0.0024805	2.8561	0.026514	0.022304	0.75343	0.013492	0	0.012237	0.05025	0.000274	-0.0071958	-0.0041546	0.5493	0.0095474	0.80231	-0.0027707	0.00027728	0.0024969	0.018794	0.0014235	-0.0018014	1.0298	0.422	0.59674	0.62624	-0.0013858	0.51594	-0.0013858	0.49933	-0.020275	0.52579	-0.035585	-0.66966	0.35953	0.99779	-0.0078863	0.38051	-0.16688	0.0040243	-0.010232	0.088258	0.0043021	
Amplification Peak  7 - CN values	7q21.3  	chr7:68184133-126346892(probes 698602:727751)      	chr7:97008474-97016983(probes 712823:712827)        	chr7:97008474-97018233(probes 712823:712830)        	0.13215	    0.13215		Actual Copy Change Given	-0.0041546	0.077286	0.93508	0.00041593	0.76926	-0.040142	0	0.23303	0.026514	0	1.342	0.0075	0	0.012237	0.05025	0.000274	1.4269	-0.0041546	0.52713	0.0038948	0.74141	-0.0027707	0.00027728	0.0024969	0.006109	0.0030522	-0.0042929	-0.0011087	-0.0087146	0.57291	0.62624	-0.0013858	0.49545	-0.0013858	1.2347	0.023426	0.49649	-0.041326	-0.33756	0.2524	0.47495	-0.0078863	-0.010492	-0.16688	0.010564	-0.0036011	0.82728	0.0043021	
Amplification Peak  8 - CN values	8q24.23 	chr8:112651328-146364022(probes 805654:825692)    	chr8:138319450-138390864(probes 822579:822631)    	chr8:126156755-146364022(probes 813935:825692)    	0.018626	   0.018626		Actual Copy Change Given	0.0027745	-0.0098185	0.019083	-0.0013858	0.35855	0.02242	0.91175	-0.078144	0.11213	0.38584	1.9592	0.72641	-0.0040162	0.0056919	0.024689	-0.0036044	0.49199	-0.038034	-0.0087146	-0.052997	-0.0049613	0	0.0040243	-0.010784	0.058081	0.001803	0.006109	0.0043021	0.016146	0.57184	-0.025483	-0.0030475	-0.01849	0.016146	1.5224	-0.10868	-0.03227	-0.025756	0.86577	0.27868	-0.14811	0.4801	0.10027	0.29326	-0.33018	0.001803	0.026654	-0.010508	
Amplification Peak  9 - CN values	12q21.1 	chr12:44411331-78338797(probes 1072913:1092629)    	chr12:72172891-72288761(probes 1088946:1089006)    	chr12:71544675-74257795(probes 1088665:1090029)    	0.085003	   0.085003		Actual Copy Change Given	0.0072217	0.001803	0.89568	-0.00069303	-0.21317	0.69201	0.84551	0.82764	0.024969	0.39861	-0.0024305	2.2208	0.004719	-0.0051227	-0.0090571	0.0059667	0	0.51194	0.0024969	0.013353	0.00057778	-0.00013862	0.00041593	0.0023581	0.00083195	0	0.056228	0	0.0027745	-0.006505	0.013213	0.161	-0.0012473	0.0084743	0.042223	0.99449	-0.00023266	0.05908	-0.0077482	0.19786	0.49424	0.2573	-0.0070957	-0.00039348	0.43075	0.0086135	0.15218	-0.012024	
Amplification Peak 10 - CN values	14q32.31	chr14:100781012-101872298(probes 1227378:1228043)	chr14:100787565-101872186(probes 1227379:1228042)	chr14:100787565-101872685(probes 1227379:1228045)	0.16999	    0.16999		Actual Copy Change Given	0.015447	0.0012481	-0.032041	0.0015255	0.024127	-0.021894	0.0026193	3.6569	0.023426	-0.017529	-0.018353	0.011261	0.00057533	-0.016292	0.0063542	0.008471	-0.024798	-0.00041585	0.0054583	0.0079175	-0.0013627	-0.0044312	0.0041632	-0.0031859	0.00041593	0.0015255	-0.026441	0.0075	0.03214	0.61262	0.040185	0.00013863	0.0051359	-0.027124	0.030367	-0.053526	-0.003695	0.044168	-0.0087532	-0.0066432	-0.01354	-0.27428	0.00774	-0.00069303	0.036512	0.0049969	-0.33618	-0.034631	
Amplification Peak 11 - CN values	16p12.2 	chr16:23898225-23998888(probes 1283952:1284021)    	chr16:23900929-23997987(probes 1283953:1284020)    	chr16:23900929-24006904(probes 1283953:1284023)    	0.24013	    0.24013		Actual Copy Change Given	-0.013264	-0.0066432	0.4375	0.00069327	-0.18559	-0.025643	0.86929	2.3169	-0.023977	-0.017254	0.0084743	0.77445	-0.0091286	0.0058309	-0.0033243	-0.0099597	-0.017116	-0.012713	-0.0091799	-0.022195	0.74559	-0.0085766	0.0013868	0.0058309	-0.033814	0.001803	0.51594	0.0094347	0.0013868	0.01447	0.73625	-0.0049844	0.014609	-0.015675	-0.021454	-0.060211	0.0047637	-0.0069195	0.0041632	0	0.45922	0.19406	0.019464	-0.014235	0.32511	-0.0026322	-0.00041585	-0.013127	
Amplification Peak 12 - CN values	18q21.2 	chr18:48582939-78077248(probes 1377566:1393452)    	chr18:51697049-53379415(probes 1379579:1380475)    	chr18:51425223-53395147(probes 1379410:1380478)    	0.065049	   0.065049		Actual Copy Change Given	-0.0047079	0.003191	1.9482	0.0058309	0.43817	0.75105	0.0046936	0.86771	0.071966	-0.017666	2.6338	0.80733	-0.0017898	0.01433	-0.011198	-0.011063	1.7871	0.53011	1.0394	0.0066653	0.0039086	0.0029133	-0.28049	-0.012713	0	-0.0018014	-0.0042929	0.52272	0.016845	-0.0089615	0.00097064	0.0027745	0.51368	0.0040243	0.040242	1.012	2.4532	0.089127	0.59332	-0.0123	-0.55699	-0.011225	0.37343	-0.0078863	0.018663	0.0040243	0.44342	0.0024969	
Amplification Peak 13 - CN values	19q13.43	chr19:55709593-57052302(probes 1415559:1416169)    	chr19:56637492-57051286(probes 1415935:1416168)    	chr19:55735221-57052651(probes 1415560:1416171)    	0.017368	   0.017368		Actual Copy Change Given	-0.029857	-0.014228	0.023005	-0.005814	0.12064	0.69089	-0.043482	2.4355	0.55691	0.35545	0.038206	-0.013402	-0.018902	-0.063301	-0.028081	-0.020827	-0.022058	0.47375	-0.014641	-0.044009	-0.0092436	-0.013953	-0.0089906	-0.0040162	-0.04211	-0.0029091	0.40477	-0.0027707	-0.031496	0.012204	-0.62255	-0.023703	0.0065262	-0.074945	-0.085015	0.89287	0.54318	-0.01106	0	0.026935	0.3206	0.018803	0.045527	-0.0077482	0.0011093	-0.018765	-0.03095	-0.04048	
Amplification Peak 14 - CN values	Xq28    	chrX:120527235-155270560(probes 1538814:1553826)  	chrX:149265835-154883300(probes 1552028:1553812)  	chrX:149265835-154883633(probes 1552028:1553815)  	0.24013	    0.24013		Actual Copy Change Given	-0.015879	0.017264	0.14474	0.87287	-0.087181	0.032116	-0.13058	0.084851	0	0.39961	1.1484	0.48113	0.022444	-0.11116	0.037924	-0.012636	0.01176	0.0062481	0.071773	-0.05551	0.065394	-0.011887	-0.0037395	0.0026357	-0.044822	1.0005	0.049256	0.099288	-0.00069303	-0.02562	-0.049559	0.012516	0.022725	0.013911	-0.077557	-0.00778	0.061893	0.012237	-0.062152	0.072253	-0.72225	0.064511	0.09329	0.014609	0.26955	-0.019863	0.97399	-0.013402	
Deletion Peak  1 - CN values	1p36.32 	chr1:1-48649489(probes 1:23925)                  	chr1:1-3821870(probes 1:308)                      	chr1:1-6962930(probes 1:2279)                     	0.011841	   0.056988		Actual Copy Change Given	0.0024969	-0.0045695	-0.022506	-0.0056757	-0.16807	-0.043761	-0.9545	-0.11952	-0.029284	-0.018765	-0.017666	0.015866	-0.0011087	-0.045093	-0.053746	-0.047244	-0.032996	-0.030257	-0.0016629	0	-0.88084	-0.0066432	-0.28236	0.00027728	-0.014916	0	-0.56863	-0.00069303	0.0054139	-0.6215	0.013911	-0.020824	0.0073609	-0.034631	-0.4822	-0.039388	-0.5473	-0.043466	-0.045277	-0.74586	-0.036982	-0.0031859	0.00051637	0.037359	-0.36901	-0.015054	-0.015054	-0.030404	
Deletion Peak  2 - CN values	1p13.1  	chr1:116959687-117120066(probes 65423:65505)  	chr1:117051820-117120066(probes 65488:65505)  	chr1:116521859-117666590(probes 65126:65856)  	0.00025614	 0.00048456		Actual Copy Change Given	0.0024969	-0.0071975	-0.0056757	-0.44566	-0.16807	-1.2929	-0.0047242	-0.049734	0.022113	-0.018765	-0.0091751	0.0066855	-0.0011087	0.01419	0.0282	0.00023136	-0.55377	-0.53165	0.0036076	0	0.0032142	0.001803	-0.27965	0.00027728	-0.0018014	0	-0.44717	-0.0023349	0.0054139	-0.63906	0.013911	0.0011093	-0.50567	0.013353	-0.4373	0.020991	0.0055976	-0.017666	-0.016429	-0.014099	0.5463	-0.0031859	0.00051637	0.037359	-0.30815	0.0079175	0.061651	-1.0642	
Deletion Peak  3 - CN values	1q43    	chr1:93485263-249250621(probes 51617:128612)   	chr1:242057541-242355431(probes 125801:125914)	chr1:223706994-249250621(probes 113583:128612)	0.0017831	  0.0017831		Actual Copy Change Given	0.0024969	-0.0030475	-0.0038779	-0.43854	-0.65975	-0.057812	0.85183	-0.056712	-0.11757	-0.036946	-0.7895	-0.89074	-0.0086619	-0.92852	-0.046312	0.0026324	-0.00055444	0.0098669	-0.55411	-0.02151	0.74255	0.001803	-0.005814	0.00027728	-0.010508	0	-0.00041585	-0.012438	-0.0034627	0.58045	-0.017666	0.0011093	-0.014778	-0.73722	0.42224	-0.055769	0.0055976	-0.017666	-0.014288	-0.014099	0.59224	-0.0031859	-0.012062	0.037359	-0.33202	-0.0095426	-0.32901	0.47306	
Deletion Peak  4 - CN values	2q23.1  	chr2:122489933-168731067(probes 192355:217170)	chr2:148775624-149276576(probes 205711:205929)	chr2:135695300-164375273(probes 198604:214690)	0.01124	   0.010679		Actual Copy Change Given	0.005045	-0.026714	0.36117	0.00069327	-0.18451	0	0.013336	0.05466	-0.01849	0.37263	-0.011611	-0.85265	-0.0022168	-0.88534	0.022058	0.0037432	0.017963	0	0.0070826	-0.027808	0.0065495	-0.33929	-0.0012473	0.00013863	0.0037465	-0.0055917	-0.0049844	0.0028186	-0.53144	0.0044411	-0.00097017	0.0038854	-0.0085766	0.010842	-0.84424	0.028903	0	0	0.021183	-0.36612	0.04812	0.23117	-0.04011	0	-0.29957	0.0013868	0.06573	-0.0011087	
Deletion Peak  5 - CN values	3p21.31 	chr3:42578769-50196417(probes 283394:287020)    	chr3:49500957-49588746(probes 286769:286789)    	chr3:49306893-49555232(probes 286705:286778)    	0.016959	   0.016959		Actual Copy Change Given	-0.38761	0.00083195	-0.057071	-0.0020784	0.90211	0.0037227	-0.00048096	0.26059	-0.13096	-0.0026322	0.6753	0.010842	0.0086135	0	0.011539	0.0073576	0.0090312	-0.40196	0.52748	0.011621	0.00043911	-0.0011113	0.0037465	0.0027745	0.012097	0	-0.043195	0.51333	0.011818	0.0015255	0.00069327	0.0038854	0.47118	0.015158	-0.4023	-1.0197	-0.006046	0.032281	0.1815	0.37397	0.015308	-0.27476	0.75611	0.0075	0.21495	-0.72862	-0.33318	-0.00027724	
Deletion Peak  6 - CN values	4q35.1  	chr4:167652787-191154276(probes 456799:467531)	chr4:185509761-186421723(probes 465992:466080)	chr4:179868034-191154276(probes 463265:467531)	0.037264	   0.039164		Actual Copy Change Given	0	0	-0.018216	-0.45896	-0.028901	-0.016865	-0.0020947	-0.044957	-0.10933	-0.019177	-0.80186	-0.86176	0.061222	-0.93177	-0.039258	-0.0070609	-0.63831	-0.51989	-0.0095426	0.025452	0.0018262	0.0038854	0	-0.0093292	0.017963	-0.024524	0.013074	-0.0033243	0	-0.65482	-0.023566	0.0026357	-0.015466	0	-0.4416	-0.062629	-0.034425	-0.078326	-0.67884	-0.024798	0.49113	-0.077478	-0.035214	0.0070826	0.017124	-0.0048461	0.087245	-0.034223	
Deletion Peak  7 - CN values	5q33.3  	chr5:157281809-158744166(probes 553645:554625)	chr5:158121691-158529491(probes 554226:554493)	chr5:157546599-158577287(probes 553819:554521)	0.016959	   0.016959		Actual Copy Change Given	-0.00041585	-0.00069303	-0.85512	0.00597	0	0.013608	0.88264	-0.039398	-0.057789	0.37783	-0.021235	0.010842	0.0026357	0.010285	0.010285	-0.021928	0.0050146	0.0114	0	-0.013739	-0.0038547	0.0041632	-0.0024938	0	0.0091705	-0.005261	0.015168	-0.0018014	0.013408	-0.67775	0	0	-0.011611	-0.014366	0.04095	0.0048579	0.011445	0.0049969	0.31594	0.12152	0.04954	0.50936	0.040853	-0.0015243	-0.0020784	-0.72782	-1.2142	-0.0059522	
Deletion Peak  8 - CN values	6p21.32 	chr6:31167499-33114170(probes 586701:586861)    	chr6:32933223-32955975(probes 586738:586743)    	chr6:30800327-32985198(probes 586530:586783)    	0.011841	   0.011841		Actual Copy Change Given	-0.0051227	-0.25358	-0.0083005	0.44105	0.45292	-0.85322	-0.0152	0.55531	-0.047124	-0.0096806	0.74024	0.015114	0.003191	-0.004259	-0.010968	-0.0038811	-0.0089906	0.0034965	-0.00041585	0.0094491	-0.011174	0.0022193	0.42974	0.0051359	-0.00025153	0.0040243	0.015866	0	-0.0036011	0.0063871	-0.014641	-0.10552	0	0.0054139	0.87195	0.00086224	0.0064319	0.010006	0.24856	-0.017254	-1.2929	0	-0.0083386	-0.12108	-0.71078	0	0.063505	-0.0053992	
Deletion Peak  9 - CN values	6q14.1  	chr6:76307902-111139036(probes 609088:628518)  	chr6:79642076-79792746(probes 610855:610914)    	chr6:76424899-140119909(probes 609138:645740)  	0.00024438	  0.0017831		Actual Copy Change Given	0.0086135	0.0036436	-0.84755	0.0027745	-0.45447	0.0095645	-0.009145	-0.36895	-0.03681	-0.0096806	-0.77744	0.015114	-0.54179	0.03031	-0.043723	-0.012386	-0.023429	0.0034965	-0.54734	-0.92137	0.0023813	0.0022193	-0.28132	-0.0021823	-0.77252	0.0040243	0.015866	0	0.0030563	-0.00069303	-0.014641	-0.10552	-0.0069195	-0.71444	-0.84808	0.01057	-0.014027	0.010006	-0.3231	-0.017254	-0.48481	0	-0.0083386	-0.12108	-0.64715	0	-0.75167	-0.039122	
Deletion Peak 10 - CN values	6q22.32 	chr6:96022438-139502638(probes 619569:645385)  	chr6:126175186-126670594(probes 636861:637106)	chr6:76424899-140119909(probes 609138:645740)  	0.00052595	   0.066287		Actual Copy Change Given	0.0086135	0.0036436	-0.0090398	0.0010597	-0.45447	0.0095645	-0.011527	-0.36703	-0.03681	-0.0096806	0.71923	0.015114	0.0080567	0.023426	-0.03286	0.014466	-0.0076101	-0.51764	0.012376	-0.92137	0.0023813	0.0022193	-0.28132	-0.0021823	-0.77252	0.0033299	-0.49715	0.010566	0.0030563	-0.00069303	-0.014641	-0.10552	-0.0069195	-0.71444	-0.84808	-1.0054	-0.0089463	0.010006	0.058081	-0.017254	-1.094	0	-0.0083386	-0.12108	-0.64715	0	-0.75167	-0.55226	
Deletion Peak 11 - CN values	6q23.3  	chr6:137860913-138410514(probes 644311:644674)	chr6:138182417-138214040(probes 644553:644563)	chr6:76424899-140119909(probes 609138:645740)  	3.7765e-07	  0.0004679		Actual Copy Change Given	0.0086135	0.0036436	-0.0090398	0.0010597	0.43159	0.0095645	-0.0022332	-0.36703	-0.03681	-0.0096806	0.71923	0.015114	0.0080567	0.023426	-0.010922	0.014466	0.01419	0.036794	0.012376	-0.92137	0.0023813	0.0022193	-0.28132	-0.0021823	-1.2929	0.0033299	-1.0477	0.010566	0.0030563	-0.00069303	0.0043021	-0.10552	-0.0069195	-0.71444	-0.84808	-0.98738	-0.0089463	0.010006	-1.2929	-0.017254	-0.49214	0	-0.0083386	-0.12108	-0.64715	-1.2929	-0.75167	-1.1236	
Deletion Peak 12 - CN values	7q33    	chr7:117853365-159138663(probes 723226:744568)	chr7:134125919-134146459(probes 731967:731978)	chr7:134129751-134167132(probes 731970:731990)	0.03486	   0.033699		Actual Copy Change Given	-0.0041546	0.077286	0.93508	0.00041593	0.76926	-0.005387	0	0.23303	0.026514	0	0.70101	-0.00069303	0	0.012237	0.05025	0.000274	-0.0024938	-0.0041546	0.52713	0.0055529	-0.0095195	0.0019418	0.00027728	0.0024969	0.006109	0.0030522	0.0081959	-0.0011087	-0.0033243	-0.66226	0.63299	-0.0013858	0.46092	-0.0013858	-0.43133	-0.021929	0.52019	-0.041326	-1.0658	0.2524	0.48045	-0.0078863	-0.010492	-0.16688	0.010564	-0.0036011	-0.78387	-0.020138	
Deletion Peak 13 - CN values	8p23.2  	chr8:1-33334473(probes 744569:764140)             	chr8:2784419-4854274(probes 745337:746749)        	chr8:3544537-3546519(probes 746044:746045)        	0.15679	    0.15095		Actual Copy Change Given	0.0027745	-0.0030475	0.019083	-0.0054178	-0.66872	-0.023863	-0.91816	-0.10229	-0.34666	0.36977	-0.0060904	-0.074411	-0.0040162	-0.95301	-0.031496	-0.021568	-0.060076	-0.041159	-0.0087146	-0.017386	0.0026589	0.00069327	0.0040243	-0.010784	0.058081	0.001803	-0.0089906	-0.0054463	-0.001989	0.59386	-0.046177	-0.0030475	-0.50795	-0.023703	-0.49825	-0.091155	-0.03227	-0.025756	-0.39575	0.30617	-0.53408	-0.59536	0.10027	0.27851	-0.32693	0.001803	-0.016828	-0.58853	
Deletion Peak 14 - CN values	8q12.1  	chr8:54623401-66555817(probes 772864:779999)    	chr8:59713200-60034328(probes 775979:776211)    	chr8:59868656-59872614(probes 776096:776097)    	0.021977	   0.020993		Actual Copy Change Given	0.0027745	-0.0098185	0.019083	-0.0013858	-0.16307	-0.76545	0.012081	-0.05725	-0.31202	0.38237	-0.0060904	-0.089434	-0.0040162	-0.91432	0.016286	0.0045767	0.0038854	-0.55817	-0.0087146	0.0029133	-0.0049613	0.0073609	0.0040243	-0.010784	0.058081	0.001803	-0.010508	-0.0054463	-0.001989	-0.66513	-0.011198	-0.0030475	-0.0041546	-0.011022	-0.40502	0.0041632	-0.03227	-0.025756	0.28042	0.28893	-0.15541	0.49493	0.10027	0.29326	-0.32693	0.001803	0.026654	0.0076392	
Deletion Peak 15 - CN values	9p21.3  	chr9:21931610-22448737(probes 839085:839420)    	chr9:21959052-21997722(probes 839107:839120)    	chr9:21550593-23517122(probes 838894:840080)    	3.3713e-22	 3.3713e-22		Actual Copy Change Given	-0.0073339	-0.0014671	-0.42429	0.0033299	0.022865	-1.2929	-0.78523	-0.089037	-0.053717	0.4996	-1.2929	-0.00041585	-0.0069195	-1.2929	-0.020275	-0.0024971	-1.0852	-0.47723	-1.0033	-0.023018	-0.0053761	0.0065262	-0.27643	-0.0030475	-0.7388	0.0038854	-0.0027707	-0.0053992	-0.0060181	0.0070826	0.012376	-0.0027707	-0.50277	-0.6691	-1.2929	-0.84963	-0.8891	0.31017	1.3403	-0.015134	-0.016841	0.75127	-0.016329	-0.010194	-1.2159	-0.69523	0.024199	-0.0059522	
Deletion Peak 16 - CN values	10q23.31	chr10:90534760-91090085(probes 945991:946390)  	chr10:90561844-90612222(probes 946019:946071)  	chr10:89531347-91450250(probes 945261:946661)  	0.00048456	 0.00048456		Actual Copy Change Given	-0.0020784	-0.0008316	-0.021373	-0.0036011	0.2321	-0.00099389	-0.89871	0.2196	0.013632	0.10521	-0.011164	0	-0.0081624	-0.0020651	0.0019418	-0.0081657	-0.0041546	-0.011887	-0.005261	0.0016642	-0.0037164	0.00013863	0.0023581	-0.0015243	-0.0034627	-0.85845	0	-0.013219	-0.006505	-0.63897	-0.62188	-0.0055375	-0.49569	-0.0091499	0.44036	0.95201	-0.003003	-0.0037395	-0.0033243	-0.012989	-1.2929	-0.005814	0.036896	-0.0053992	0.00083195	-0.68961	0.045282	-0.064643	
Deletion Peak 17 - CN values	12p13.2 	chr12:1-22595769(probes 1050692:1063137)         	chr12:11795940-12048611(probes 1056389:1056720)	chr12:11712846-13986594(probes 1056344:1058004)	0.11856	    0.11368		Actual Copy Change Given	0.0072217	0.001803	0.90694	-0.00069303	-0.20436	-0.74844	0.84551	-0.024661	-0.043195	0.40744	-0.007596	-0.88982	0.0044411	-0.018628	-0.0062286	0.0059667	-0.55086	0.011958	0.0024969	0.013353	0.00057778	0.00069327	0.00041593	0.0023581	0.00083195	0	0.0024969	0.00027728	0.0027745	-0.005814	-0.6264	0.161	-0.4984	0.0084743	0.0106	-0.0071958	-0.00023266	0.018098	0.012237	0.0036076	-0.53865	0.2573	-0.0070957	0.0012481	-0.33514	-0.0073339	0.54647	0.0095883	
Deletion Peak 18 - CN values	13q14.2 	chr13:48875329-49064807(probes 1142669:1142888)	chr13:48960484-49022512(probes 1142794:1142864)	chr13:48971579-49014333(probes 1142803:1142848)	0.016959	   0.016959		Actual Copy Change Given	-0.029721	0.0029133	-0.038015	0.0024969	0.13089	0.0171	-0.014244	-0.055499	0.055373	-0.025893	0.027357	-0.8283	0.49666	0.013213	-0.0033243	-0.00083488	-0.016154	0.010006	-0.010646	0.31241	0.00043911	-0.0014307	-0.0022168	-0.007472	0.021744	-0.84995	0.0075	-0.011611	0.5393	-0.013127	-1.1532	-0.0023553	-0.0077482	-0.0026322	0.47074	-0.012989	-0.015835	0.003191	0.0041632	-0.015329	-0.53236	-0.27906	-0.014404	0.17799	0.003191	-0.0056757	-0.33075	-0.52471	
Deletion Peak 19 - CN values	15q21.1 	chr15:44953604-45026122(probes 1239903:1239938)	chr15:45001788-45013397(probes 1239917:1239926)	chr15:40473221-45423888(probes 1237931:1240013)	7.1625e-05	 7.1625e-05		Actual Copy Change Given	-0.37335	0.0041632	-0.0049844	-0.00055444	-0.63491	-0.0039015	0.0049805	0.50264	-0.10316	-0.020138	-0.0011087	-0.87673	0.48251	-0.010303	-0.0037395	0.0056886	-0.0049844	-0.013402	0.0030522	-0.0085766	-0.015581	-0.0037395	0.0043021	0.0013868	-0.012162	-0.84267	0.44664	0.019643	-0.54451	-0.63481	-1.2468	-0.0011087	-0.48858	0.0022193	-0.43546	-1.2929	0.0050416	-0.038088	-0.64067	0.0011093	-0.025072	0.0062481	-0.046079	-0.007472	-0.0029914	-0.72482	0	-0.0022168	
Deletion Peak 20 - CN values	16p13.13	chr16:10910547-11030197(probes 1279196:1279292)	chr16:10970628-11030197(probes 1279241:1279292)	chr16:10910547-11010643(probes 1279196:1279274)	0.02587	   0.023682		Actual Copy Change Given	-0.013264	-0.0066432	0.4375	0.00069327	-0.18559	-0.025643	-0.0036175	-0.053476	-0.023977	-0.94276	0.016146	-0.9156	-0.0091286	0.0058309	-0.0033243	-0.0099597	-0.017116	0.98252	-0.0091799	-0.040876	-0.86804	-0.0085766	0.0013868	0.0058309	-0.033814	0.001803	0.031718	0.0094347	0.0013868	0.01447	0.73625	-0.0049844	0.014609	-0.015675	-0.021454	-0.060211	0.0047637	-0.0069195	0.0041632	0	-0.066386	-0.44609	0.019464	-0.014235	1.0536	-0.0026322	-0.0047079	-0.54502	
Deletion Peak 21 - CN values	16q23.1 	chr16:78098006-79299841(probes 1306804:1307869)	chr16:78129058-79247026(probes 1306835:1307840)	chr16:78583258-78586506(probes 1307338:1307339)	0.13851	    0.13588		Actual Copy Change Given	-0.013264	-0.0029091	0.4375	-0.88109	-0.18559	-0.017505	0.89264	0.11052	-0.023977	-0.017254	-0.0037395	-0.89369	-0.0091286	-0.92658	-0.033541	-0.013956	-0.01354	-0.028765	-0.0091799	-0.022195	0.74559	-0.0085766	0.0013868	0.0058309	-0.020001	0.020763	0.51594	0.024548	-0.06264	0.00013863	-0.59419	-0.0049844	0.014609	-0.015675	-0.021454	-0.061958	-0.0083941	-0.0069195	-0.02151	0	-0.035448	0.19223	0.019464	0.0024969	0.32511	-0.0026322	-0.00041585	0.012197	
Deletion Peak 22 - CN values	17p13.1 	chr17:1-62229443(probes 1314333:1341492)         	chr17:7458583-7523773(probes 1317406:1317425)    	chr17:7469079-7473456(probes 1317411:1317412)    	0.18166	    0.18999		Actual Copy Change Given	-0.00069303	-0.0044312	-0.0019399	-0.0019544	-0.39408	-0.011192	0.8394	-0.42396	0.01447	0.37726	0.023286	-0.90411	-0.0070576	-0.96925	-0.022469	-0.006246	0.0034687	-0.021647	-0.0036011	-0.034905	-0.0019706	-0.0067813	-0.005814	0.00097064	-0.030131	-0.0062286	-0.02151	0.017124	-0.011749	0.021884	-0.62589	-0.0027707	0.017544	-0.019726	-0.49717	-0.046583	0.015073	-0.0023553	-0.31972	-0.32007	-0.63472	-0.12043	0.032591	-0.0034627	-0.69378	0.0033299	-0.81556	-0.67591	
Deletion Peak 23 - CN values	17q24.1 	chr17:62970616-63525081(probes 1341810:1342191)	chr17:63003700-63057650(probes 1341826:1341859)	chr17:62948574-63223948(probes 1341799:1341965)	0.013097	   0.013543		Actual Copy Change Given	-0.00069303	-0.0045695	-0.86003	-0.0044312	0.040185	-0.01067	0.87047	0.21776	0.01447	0.37726	0.023286	-0.0071958	-0.0070576	-0.02384	-0.0018014	0.0038821	0.0034687	-0.021647	-0.0040162	-0.012438	-1.2929	-0.0123	-0.005814	-0.00019371	-0.030131	-0.86578	-0.02151	0.017124	-0.011749	0.021884	0.038489	-0.0027707	0.017544	-0.019726	-0.46116	-0.028218	0.015073	-0.0023553	-0.025335	0.017124	0.38122	-0.12043	0.019184	-0.012277	-0.0067167	-0.76569	-0.17904	-0.55557	
Deletion Peak 24 - CN values	19p13.2 	chr19:8000602-8118949(probes 1395719:1395756)    	chr19:8017820-8073463(probes 1395723:1395740)    	chr19:8042237-8053104(probes 1395732:1395733)    	0.032222	   0.031741		Actual Copy Change Given	-0.029857	-0.014228	0.00458	-0.005814	0.1133	-0.055657	-0.043482	-0.070135	-0.076524	-0.039258	0.036088	-0.035585	-0.011198	-0.074678	-0.038369	-0.020827	-0.029857	-0.049019	0.0026357	-0.99172	-0.0092436	-0.011611	-0.0089906	-0.0040162	-0.04211	-0.0029091	-0.03817	0.0066653	-0.031496	0.025671	-0.62874	-0.023703	0.0065262	-0.072808	-0.080753	-0.090361	0.028105	-0.01106	0	0.026935	0.30729	0.018803	-0.34896	-0.0077482	-0.33387	-0.015054	-0.043873	-0.043466	
Deletion Peak 25 - CN values	19q13.2 	chr19:42567946-42801342(probes 1410632:1410695)	chr19:42634499-42732964(probes 1410655:1410679)	chr19:42598507-42805635(probes 1410641:1410696)	0.069338	   0.071351		Actual Copy Change Given	-0.029857	-0.014228	-0.00075494	-0.005814	0.12064	-0.0088763	-0.043482	-0.081605	0.016705	0.35545	-0.70442	-0.035585	-0.018902	-0.063301	-0.028081	-0.020827	-0.022058	-0.049019	0.0026357	-0.91387	-0.0092436	-0.013953	-0.0089906	-0.0040162	-0.04211	-0.0029091	-0.027535	0.0057383	-0.031496	0.012204	0.029888	-0.023703	0.0065262	-0.75124	-0.085015	1.824	0.5363	-0.01106	0	0.026935	-0.64019	0.018803	-0.32905	-0.0077482	-0.018353	-0.018765	-0.039529	-0.04048	
Deletion Peak 26 - CN values	22q13.31	chr22:41635693-51304566(probes 1486323:1491312)	chr22:45585805-45650620(probes 1488710:1488744)	chr22:45613514-45617241(probes 1488728:1488729)	0.21158	    0.21158		Actual Copy Change Given	-0.0027707	-0.0008316	-0.03245	0.006109	-0.16001	-0.022017	-0.94277	-0.13587	-0.067056	-0.041429	0.0048579	-0.91063	-0.0011087	-0.042245	-0.0098185	-0.027128	-0.030813	-0.037762	-0.012162	-0.036538	0.0029365	-0.013815	-0.10836	-0.0048461	-0.034768	-0.0091286	-0.021098	0.017124	-0.0098185	0.029184	0.028481	-0.0030475	0.017684	-0.016567	-0.49669	-0.060748	0.013816	-0.051046	-0.00055444	-0.35019	-0.0073339	-0.011749	0.0059487	-0.013264	-0.03286	-0.00041585	-0.028765	-0.03681