Unique Name Descriptor Wide Peak Limits Peak Limits Region Limits q values Residual q values after removing segments shared with higher peaks Broad or Focal Amplitude Threshold TCGA-2K-A9WE-01A-11D-A381-01 TCGA-2Z-A9J1-01A-11D-A381-01 TCGA-2Z-A9J2-01A-11D-A381-01 TCGA-2Z-A9J3-01A-12D-A381-01 TCGA-2Z-A9J5-01A-21D-A381-01 TCGA-2Z-A9J6-01A-11D-A381-01 TCGA-2Z-A9J7-01A-11D-A381-01 TCGA-2Z-A9J8-01A-11D-A42I-01 TCGA-2Z-A9J9-01A-11D-A42I-01 TCGA-2Z-A9JD-01A-11D-A42I-01 TCGA-2Z-A9JE-01A-11D-A42I-01 TCGA-2Z-A9JG-01A-11D-A42I-01 TCGA-2Z-A9JI-01A-11D-A42I-01 TCGA-2Z-A9JJ-01A-11D-A42I-01 TCGA-2Z-A9JK-01A-11D-A42I-01 TCGA-2Z-A9JL-01A-11D-A42I-01 TCGA-2Z-A9JM-01A-12D-A42I-01 TCGA-2Z-A9JN-01A-21D-A42I-01 TCGA-2Z-A9JO-01A-11D-A42I-01 TCGA-2Z-A9JP-01A-11D-A42I-01 TCGA-2Z-A9JQ-01A-11D-A42I-01 TCGA-2Z-A9JR-01A-12D-A42I-01 TCGA-2Z-A9JS-01A-21D-A42I-01 TCGA-2Z-A9JT-01A-11D-A42I-01 TCGA-4A-A93W-01A-11D-A36W-01 TCGA-4A-A93X-01A-11D-A36W-01 TCGA-4A-A93Y-01A-11D-A36W-01 TCGA-5P-A9JU-01A-11D-A42I-01 TCGA-5P-A9JV-01A-12D-A42I-01 TCGA-5P-A9JW-01A-11D-A42I-01 TCGA-5P-A9JY-01A-11D-A42I-01 TCGA-5P-A9JZ-01A-11D-A42I-01 TCGA-5P-A9K0-01A-11D-A42I-01 TCGA-5P-A9K2-01A-11D-A42I-01 TCGA-5P-A9K3-01A-11D-A42I-01 TCGA-5P-A9K4-01A-11D-A42I-01 TCGA-5P-A9K6-01A-11D-A42I-01 TCGA-5P-A9K8-01A-11D-A42I-01 TCGA-5P-A9K9-01A-11D-A42I-01 TCGA-5P-A9KA-01A-11D-A42I-01 TCGA-5P-A9KC-01A-11D-A42I-01 TCGA-5P-A9KE-01A-11D-A42I-01 TCGA-5P-A9KH-01A-11D-A42I-01 TCGA-A4-7286-01A-11D-2135-01 TCGA-A4-7287-01A-11D-2135-01 TCGA-A4-7288-01A-11D-2135-01 TCGA-A4-7583-01A-11D-2135-01 TCGA-A4-7584-01A-11D-2135-01 TCGA-A4-7585-01A-11D-2135-01 TCGA-A4-7732-01A-11D-2135-01 TCGA-A4-7734-01A-11D-2135-01 TCGA-A4-7828-01A-11D-2135-01 TCGA-A4-7915-01A-11D-2200-01 TCGA-A4-7996-01A-11D-2200-01 TCGA-A4-7997-01A-11D-2200-01 TCGA-A4-8098-01A-11D-2392-01 TCGA-A4-8310-01A-11D-2392-01 TCGA-A4-8311-01A-11D-2392-01 TCGA-A4-8312-01A-11D-2392-01 TCGA-A4-8515-01A-11D-2392-01 TCGA-A4-8516-01A-11D-2392-01 TCGA-A4-8517-01A-11D-2392-01 TCGA-A4-8518-01A-11D-2392-01 TCGA-A4-8630-01A-11D-2392-01 TCGA-A4-A48D-01A-11D-A253-01 TCGA-A4-A4ZT-01A-11D-A26O-01 TCGA-A4-A57E-01A-11D-A26O-01 TCGA-A4-A5DU-01A-11D-A28F-01 TCGA-A4-A5XZ-01A-11D-A31W-01 TCGA-A4-A5Y0-01A-11D-A31W-01 TCGA-A4-A5Y1-01A-11D-A28F-01 TCGA-A4-A6HP-01A-11D-A31W-01 TCGA-A4-A772-01A-11D-A33P-01 TCGA-A4-A7UZ-01A-12D-A34Y-01 TCGA-AL-3466-01A-01D-1190-01 TCGA-AL-3467-01A-02D-1348-01 TCGA-AL-3468-01A-02D-1348-01 TCGA-AL-3471-01A-02D-1348-01 TCGA-AL-3472-01A-01D-1190-01 TCGA-AL-3473-01A-01D-1190-01 TCGA-AL-7173-01A-11D-2135-01 TCGA-AL-A5DJ-01A-11D-A26O-01 TCGA-AT-A5NU-01A-11D-A28F-01 TCGA-B1-5398-01A-02D-1588-01 TCGA-B1-7332-01A-11D-2135-01 TCGA-B1-A47M-01A-11D-A253-01 TCGA-B1-A47N-01A-11D-A253-01 TCGA-B1-A47O-01A-11D-A253-01 TCGA-B1-A654-01A-11D-A31W-01 TCGA-B1-A655-01A-11D-A31W-01 TCGA-B1-A656-01A-11D-A31W-01 TCGA-B1-A657-01A-11D-A31W-01 TCGA-B3-3925-01A-02D-1348-01 TCGA-B3-3926-01A-02D-1348-01 TCGA-B3-4103-01A-02D-1348-01 TCGA-B3-4104-01A-02D-1348-01 TCGA-B3-8121-01A-21D-2392-01 TCGA-B3-A6W5-01A-12D-A33P-01 TCGA-B9-4113-01A-01D-1190-01 TCGA-B9-4114-01A-01D-1190-01 TCGA-B9-4115-01A-01D-1549-01 TCGA-B9-4116-01A-02D-1348-01 TCGA-B9-4117-01A-02D-1348-01 TCGA-B9-4617-01A-01D-1190-01 TCGA-B9-5155-01A-01D-1588-01 TCGA-B9-5156-01A-01D-1588-01 TCGA-B9-7268-01A-11D-2135-01 TCGA-B9-A44B-01A-11D-A253-01 TCGA-B9-A5W7-01A-11D-A31W-01 TCGA-B9-A5W8-01A-11D-A28F-01 TCGA-B9-A5W9-01A-11D-A28F-01 TCGA-B9-A69E-01A-11D-A31W-01 TCGA-B9-A8YH-01A-11D-A36W-01 TCGA-B9-A8YI-01A-21D-A36W-01 TCGA-BQ-5875-01A-11D-1588-01 TCGA-BQ-5876-01A-11D-1588-01 TCGA-BQ-5877-01A-11D-1588-01 TCGA-BQ-5878-01A-11D-1588-01 TCGA-BQ-5879-01A-11D-1588-01 TCGA-BQ-5880-01A-11D-1588-01 TCGA-BQ-5881-01A-11D-1588-01 TCGA-BQ-5882-01A-11D-1588-01 TCGA-BQ-5883-01A-11D-1588-01 TCGA-BQ-5884-01A-11D-1588-01 TCGA-BQ-5885-01A-11D-1588-01 TCGA-BQ-5886-01A-11D-1588-01 TCGA-BQ-5887-01A-11D-1959-01 TCGA-BQ-5888-01A-11D-1588-01 TCGA-BQ-5889-01A-11D-1588-01 TCGA-BQ-5890-01A-11D-1588-01 TCGA-BQ-5891-01A-11D-1588-01 TCGA-BQ-5892-01A-11D-1588-01 TCGA-BQ-5893-01A-11D-1588-01 TCGA-BQ-5894-01A-11D-1588-01 TCGA-BQ-7044-01A-11D-1959-01 TCGA-BQ-7045-01A-31D-1959-01 TCGA-BQ-7046-01A-11D-1959-01 TCGA-BQ-7048-01A-11D-1959-01 TCGA-BQ-7049-01A-11D-1959-01 TCGA-BQ-7050-01A-11D-1959-01 TCGA-BQ-7051-01A-12D-1959-01 TCGA-BQ-7053-01A-11D-1959-01 TCGA-BQ-7055-01A-11D-1959-01 TCGA-BQ-7056-01A-11D-1959-01 TCGA-BQ-7058-01A-11D-1959-01 TCGA-BQ-7059-01A-11D-1959-01 TCGA-BQ-7060-01A-11D-1959-01 TCGA-BQ-7061-01A-11D-1959-01 TCGA-BQ-7062-01A-11D-1959-01 TCGA-DW-5560-01A-01D-1588-01 TCGA-DW-5561-01A-01D-1588-01 TCGA-DW-7834-01A-11D-2135-01 TCGA-DW-7836-01A-11D-2135-01 TCGA-DW-7837-01A-11D-2135-01 TCGA-DW-7838-01A-11D-2135-01 TCGA-DW-7839-01A-11D-2135-01 TCGA-DW-7840-01A-11D-2135-01 TCGA-DW-7841-01A-11D-2135-01 TCGA-DW-7842-01A-11D-2135-01 TCGA-DW-7963-01B-11D-A28F-01 TCGA-DZ-6131-01A-11D-1959-01 TCGA-DZ-6132-01A-11D-1959-01 TCGA-DZ-6133-01A-11D-1959-01 TCGA-DZ-6134-01A-11D-1959-01 TCGA-DZ-6135-01A-11D-1959-01 TCGA-EV-5901-01A-11D-1588-01 TCGA-EV-5902-01A-11D-1588-01 TCGA-EV-5903-01A-11D-1588-01 TCGA-F9-A4JJ-01A-11D-A253-01 TCGA-F9-A7Q0-01A-11D-A35Y-01 TCGA-F9-A7VF-01A-11D-A33P-01 TCGA-F9-A8NY-01A-11D-A40C-01 TCGA-F9-A97G-01A-11D-A381-01 TCGA-G7-6789-01A-11D-1959-01 TCGA-G7-6790-01A-11D-1959-01 TCGA-G7-6792-01A-21D-1959-01 TCGA-G7-6793-01A-11D-1959-01 TCGA-G7-6795-01A-11D-1959-01 TCGA-G7-6796-01A-11D-1959-01 TCGA-G7-6797-01A-11D-1959-01 TCGA-G7-7501-01A-11D-2200-01 TCGA-G7-7502-01A-11D-2200-01 TCGA-G7-A4TM-01A-11D-A31W-01 TCGA-G7-A8LB-01A-11D-A40C-01 TCGA-G7-A8LC-01A-11D-A35Y-01 TCGA-G7-A8LD-01A-11D-A35Y-01 TCGA-G7-A8LE-01A-11D-A40C-01 TCGA-GL-6846-01A-11D-1959-01 TCGA-GL-7773-01A-11D-2135-01 TCGA-GL-7966-01A-11D-2200-01 TCGA-GL-8500-01A-11D-2392-01 TCGA-GL-A4EM-01A-11D-A253-01 TCGA-GL-A59R-01A-11D-A26O-01 TCGA-GL-A59T-01A-21D-A28F-01 TCGA-GL-A9DC-01A-11D-A36W-01 TCGA-GL-A9DD-01A-11D-A36W-01 TCGA-GL-A9DE-01A-11D-A36W-01 TCGA-HE-7128-01A-11D-1959-01 TCGA-HE-7129-01A-11D-1959-01 TCGA-HE-7130-01A-11D-1959-01 TCGA-HE-A5NF-01A-11D-A26O-01 TCGA-HE-A5NH-01A-11D-A26O-01 TCGA-HE-A5NI-01A-11D-A26O-01 TCGA-HE-A5NJ-01A-11D-A26O-01 TCGA-HE-A5NK-01A-11D-A26O-01 TCGA-HE-A5NL-01A-11D-A26O-01 TCGA-IA-A40U-01A-11D-A253-01 TCGA-IA-A40X-01A-11D-A253-01 TCGA-IA-A40Y-01A-11D-A253-01 TCGA-IA-A83S-01A-11D-A34Y-01 TCGA-IA-A83T-01A-11D-A34Y-01 TCGA-IA-A83V-01A-11D-A34Y-01 TCGA-IA-A83W-01A-11D-A34Y-01 TCGA-IZ-8195-01A-31D-2392-01 TCGA-IZ-8196-01A-11D-2392-01 TCGA-IZ-A6M8-01A-11D-A31W-01 TCGA-IZ-A6M9-01A-11D-A31W-01 TCGA-J7-6720-01A-11D-2135-01 TCGA-J7-8537-01A-11D-2392-01 TCGA-J7-A8I2-01A-12D-A35Y-01 TCGA-KV-A6GD-01A-11D-A31W-01 TCGA-KV-A6GE-01A-11D-A31W-01 TCGA-KV-A74V-01A-11D-A33P-01 TCGA-MH-A55W-01A-11D-A26O-01 TCGA-MH-A55Z-01A-11D-A26O-01 TCGA-MH-A560-01A-11D-A26O-01 TCGA-MH-A561-01A-11D-A26O-01 TCGA-MH-A562-01A-11D-A26O-01 TCGA-MH-A854-01A-11D-A34Y-01 TCGA-MH-A855-01A-11D-A34Y-01 TCGA-MH-A856-01A-11D-A34Y-01 TCGA-MH-A857-01A-11D-A34Y-01 TCGA-O9-A75Z-01A-11D-A33P-01 TCGA-P4-A5E6-01A-11D-A28F-01 TCGA-P4-A5E7-01A-31D-A28F-01 TCGA-P4-A5E8-01A-11D-A28F-01 TCGA-P4-A5EA-01A-11D-A28F-01 TCGA-P4-A5EB-01A-11D-A28F-01 TCGA-P4-A5ED-01A-11D-A28F-01 TCGA-P4-AAVK-01A-11D-A42I-01 TCGA-P4-AAVL-01A-11D-A42I-01 TCGA-P4-AAVM-01A-11D-A42I-01 TCGA-P4-AAVO-01A-11D-A42I-01 TCGA-PJ-A5Z8-01A-11D-A28F-01 TCGA-PJ-A5Z9-01A-11D-A28F-01 TCGA-Q2-A5QZ-01A-11D-A28F-01 TCGA-SX-A71R-01A-12D-A33P-01 TCGA-SX-A71S-01A-11D-A33P-01 TCGA-SX-A71U-01A-12D-A33P-01 TCGA-SX-A71V-01A-11D-A33P-01 TCGA-SX-A7SL-01A-11D-A34Y-01 TCGA-SX-A7SM-01A-11D-A34Y-01 TCGA-SX-A7SN-01A-11D-A34Y-01 TCGA-SX-A7SO-01A-11D-A34Y-01 TCGA-SX-A7SP-01A-11D-A34Y-01 TCGA-SX-A7SQ-01A-12D-A35Y-01 TCGA-SX-A7SR-01A-12D-A35Y-01 TCGA-SX-A7SS-01A-11D-A35Y-01 TCGA-SX-A7SU-01A-11D-A35Y-01 TCGA-UN-AAZ9-01A-11D-A381-01 TCGA-UZ-A9PJ-01A-11D-A381-01 TCGA-UZ-A9PK-01A-11D-A381-01 TCGA-UZ-A9PL-01A-11D-A381-01 TCGA-UZ-A9PM-01A-21D-A381-01 TCGA-UZ-A9PN-01A-11D-A381-01 TCGA-UZ-A9PO-01A-11D-A381-01 TCGA-UZ-A9PP-01A-11D-A42I-01 TCGA-UZ-A9PQ-01A-11D-A42I-01 TCGA-UZ-A9PR-01A-11D-A42I-01 TCGA-UZ-A9PS-01A-11D-A42I-01 TCGA-UZ-A9PU-01A-11D-A42I-01 TCGA-UZ-A9PV-01A-11D-A42I-01 TCGA-UZ-A9PX-01A-11D-A42I-01 TCGA-UZ-A9PZ-01A-11D-A42I-01 TCGA-UZ-A9Q0-01A-12D-A42I-01 TCGA-UZ-A9Q1-01A-11D-A42I-01 TCGA-V9-A7HT-01A-11D-A33P-01 TCGA-WN-A9G9-01A-12D-A36W-01 TCGA-WN-AB4C-01A-11D-A42I-01 TCGA-Y8-A894-01A-11D-A35Y-01 TCGA-Y8-A895-01A-11D-A35Y-01 TCGA-Y8-A896-01A-11D-A35Y-01 TCGA-Y8-A897-01A-11D-A35Y-01 TCGA-Y8-A898-01A-11D-A34Y-01 TCGA-Y8-A8RY-01A-11D-A36W-01 TCGA-Y8-A8RZ-01A-11D-A36W-01 TCGA-Y8-A8S0-01A-11D-A36W-01 TCGA-Y8-A8S1-01A-11D-A36W-01 Amplification Peak 1 2p23.2 chr2:27910707-28747666(probes 145369:145813) chr2:27990933-28007826(probes 145393:145399) chr2:27990933-28014318(probes 145393:145402) 0.13274 0.13274 0: t<0.1; 1: 0.10.9 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 2 1 2 0 0 0 0 2 0 0 1 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 1 1 0 0 1 0 0 0 0 0 0 1 2 0 0 0 1 0 0 0 1 0 0 0 0 0 1 1 0 1 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Amplification Peak 2 2q32.1 chr2:185805454-186960953(probes 227580:227814) chr2:186298225-186912586(probes 227772:227786) chr2:171448381-243199373(probes 219044:259416) 0.0016379 0.0016379 0: t<0.1; 1: 0.10.9 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 2 1 2 0 0 0 0 1 0 0 1 0 0 1 0 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 2 0 0 0 0 0 0 1 0 0 0 0 0 0 1 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 1 0 1 1 0 0 1 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 Amplification Peak 3 3q26.31 chr3:145785598-198022430(probes 339130:365376) chr3:171998244-172169406(probes 352359:352492) chr3:171998244-172181180(probes 352359:352495) 0.15981 0.15981 0: t<0.1; 1: 0.10.9 1 0 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 1 0 1 1 0 1 1 1 1 0 2 1 0 0 0 1 1 0 0 1 2 0 0 0 0 2 0 1 1 0 0 0 0 0 1 0 0 1 0 0 1 0 1 0 0 1 1 1 1 1 1 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 1 1 1 0 0 0 0 1 2 1 1 0 1 1 0 0 0 1 1 0 0 0 1 0 2 0 0 0 0 0 0 2 0 1 0 1 0 0 0 0 0 1 0 1 0 1 2 1 1 0 1 0 0 1 0 0 1 1 0 0 1 0 0 0 0 0 0 0 1 1 1 1 0 0 0 0 0 0 0 0 0 2 1 0 1 0 0 0 1 1 0 0 1 1 0 0 0 1 0 0 1 0 1 1 0 1 0 0 0 1 0 1 1 0 0 0 0 1 1 2 0 1 1 1 1 0 0 0 1 0 0 0 0 1 0 0 Amplification Peak 4 5q35.3 chr5:136441083-180915260(probes 540923:567562) chr5:176723681-176784511(probes 565938:565970) chr5:169011114-180915260(probes 561315:567562) 0.069756 0.069756 0: t<0.1; 1: 0.10.9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 2 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2 0 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Amplification Peak 5 7p11.2 chr7:56595049-57921703(probes 696656:696757) chr7:56595194-57198660(probes 696657:696729) chr7:56595194-57205766(probes 696657:696732) 0.18303 0.18303 0: t<0.1; 1: 0.10.9 1 1 0 2 1 1 2 0 0 1 2 0 0 0 0 2 2 0 0 1 2 2 1 1 2 1 0 1 0 0 1 0 1 1 0 1 2 0 1 0 1 1 0 0 0 1 0 1 0 2 1 0 0 1 1 0 1 1 0 1 2 1 0 1 0 2 1 2 2 0 0 2 1 2 1 0 2 1 1 0 1 1 1 0 0 2 1 0 2 0 1 1 1 0 1 0 1 2 2 1 2 0 1 2 1 1 1 0 1 0 0 0 2 0 0 0 0 0 0 0 1 0 0 1 0 0 1 0 1 0 2 1 0 1 1 1 1 0 0 0 2 0 0 0 0 1 1 1 1 1 2 1 1 1 1 0 2 1 1 1 0 1 2 1 0 1 0 2 0 1 1 1 0 1 1 0 0 2 0 0 0 1 2 2 1 0 1 1 0 1 1 0 1 1 0 1 0 1 2 1 1 1 2 2 0 1 0 0 1 0 1 1 0 0 2 1 1 2 0 0 1 2 1 2 2 0 0 2 0 0 0 0 2 0 2 0 0 0 0 1 1 0 0 0 1 1 2 1 1 1 0 1 2 0 1 1 1 2 2 0 2 1 2 2 1 1 0 0 2 0 2 2 2 2 1 1 1 0 0 0 1 1 0 1 2 0 1 0 Amplification Peak 6 7q31.2 chr7:115065872-116807349(probes 721483:722626) chr7:116382931-116535003(probes 722350:722491) chr7:112950348-123412639(probes 720439:726172) 0.0001518 0.0001518 0: t<0.1; 1: 0.10.9 1 1 0 2 1 1 2 0 0 1 2 0 0 0 0 2 2 0 0 1 2 2 1 1 2 1 0 1 0 0 1 2 1 1 0 1 2 0 1 0 1 1 0 0 0 1 0 1 0 2 1 0 0 1 1 0 1 1 0 1 2 1 0 1 0 2 1 2 2 0 0 2 1 2 0 0 2 1 1 0 1 1 1 0 0 2 1 0 2 0 1 1 1 0 1 0 1 2 2 1 2 2 1 2 1 1 1 0 1 0 0 0 2 0 0 0 0 0 0 0 1 0 0 1 0 0 1 0 1 0 2 1 0 1 1 1 1 0 0 0 2 0 0 0 0 1 1 1 1 2 2 1 1 1 1 0 2 1 1 1 0 1 2 1 0 1 0 2 0 1 1 1 0 1 1 0 1 2 0 0 0 1 2 2 1 0 1 1 0 1 1 0 1 1 0 1 0 1 2 1 1 1 2 2 0 1 0 0 1 0 1 1 0 0 2 1 1 2 0 0 1 2 1 2 2 0 0 2 0 0 0 0 2 0 2 0 0 0 0 1 2 0 0 0 1 1 2 2 1 1 0 1 2 0 1 1 1 2 2 0 2 1 2 2 1 1 0 0 2 0 2 2 2 2 1 1 1 0 0 0 1 1 0 1 2 0 1 0 Amplification Peak 7 17q23.2 chr17:43511539-81195210(probes 1332031:1351016) chr17:59658121-61353004(probes 1340317:1341053) chr17:57700582-62242677(probes 1339360:1341476) 0.14801 0.14801 0: t<0.1; 1: 0.10.9 1 1 1 1 1 1 1 0 0 1 1 0 2 0 0 0 1 0 0 1 1 1 1 1 1 0 0 0 0 0 1 1 1 1 1 1 1 0 1 0 0 1 0 1 0 1 0 1 1 1 1 0 1 1 0 1 1 1 0 1 1 1 1 1 0 1 1 2 1 1 0 1 1 1 2 0 1 2 1 0 0 1 1 0 1 1 1 1 1 1 0 1 1 0 1 2 1 1 1 1 1 0 2 1 1 1 1 1 1 0 2 0 1 0 1 0 1 0 0 1 1 0 0 0 0 1 1 1 0 1 2 1 1 0 0 1 2 0 0 0 1 1 0 0 1 0 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 0 1 1 1 0 2 2 0 1 2 1 0 0 1 1 1 1 2 1 1 0 1 0 1 1 2 1 1 0 1 1 0 1 1 1 1 0 1 1 0 1 0 1 1 0 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 0 0 0 0 1 0 1 0 1 1 0 0 1 0 0 0 1 2 1 1 1 1 1 0 1 0 1 1 1 1 1 0 2 1 1 1 0 1 1 0 1 1 1 1 1 1 1 0 1 0 1 0 1 0 0 1 1 0 1 0 Deletion Peak 1 1p36.31 chr1:1-29472434(probes 1:13540) chr1:6261872-6281666(probes 1954:1962) chr1:1-48411005(probes 1:23744) 1.462e-09 1.462e-09 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 1 1 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 1 0 0 1 0 1 0 1 0 0 1 0 0 1 0 0 1 0 1 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 0 0 1 1 1 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 Deletion Peak 2 2p12 chr2:1-98931728(probes 128606:179794) chr2:81720701-81724877(probes 175523:175524) chr2:81600361-81831868(probes 175471:175597) 0.08832 0.08832 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Deletion Peak 3 2q22.1 chr2:140708948-143637838(probes 201139:202981) chr2:140976294-142894275(probes 201273:202544) chr2:141739289-142144022(probes 201713:201967) 0.014385 0.069402 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Deletion Peak 4 2q37.3 chr2:215795572-243199373(probes 243229:259416) chr2:241936269-242035145(probes 259118:259169) chr2:204651800-243199373(probes 236507:259416) 5.174e-05 0.00035375 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 Deletion Peak 5 3p22.1 chr3:41280645-41732267(probes 282819:283013) chr3:41286244-42218893(probes 282820:283079) chr3:41611229-41613346(probes 282950:282951) 0.0024404 0.002385 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 Deletion Peak 6 4q34.3 chr4:179280062-183067669(probes 463181:465119) chr4:181521852-182082855(probes 464327:464330) chr4:181525132-182958953(probes 464328:465029) 0.0001377 0.0001377 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Deletion Peak 7 5p15.33 chr5:1-31329532(probes 467523:485462) chr5:1314317-1350010(probes 467586:467594) chr5:1309468-1350010(probes 467584:467594) 0.09673 0.096799 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Deletion Peak 8 5q35.2 chr5:93063923-180915260(probes 516867:567562) chr5:175081630-175113556(probes 565409:565419) chr5:175102973-175112682(probes 565415:565416) 0.11554 0.12162 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Deletion Peak 9 6p12.3 chr6:44235214-70508162(probes 593517:605635) chr6:49975265-50024298(probes 596819:596838) chr6:49965044-50279483(probes 596814:597003) 0.11427 0.12162 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 1 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Deletion Peak 10 6q25.3 chr6:144604464-171115067(probes 648059:663565) chr6:157775888-158099316(probes 656673:656771) chr6:158040970-158042764(probes 656723:656724) 0.054498 0.053404 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 0 1 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Deletion Peak 11 9p21.3 chr9:21626574-22448737(probes 838931:839405) chr9:21959052-21997722(probes 839093:839106) chr9:20870619-26474475(probes 838367:841753) 2.2596e-17 2.2596e-17 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 1 0 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 Deletion Peak 12 10q21.1 chr10:49889860-69836432(probes 921883:933059) chr10:58354926-58362342(probes 926115:926116) chr10:58326466-58488383(probes 926099:926166) 0.1975 0.20764 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Deletion Peak 13 11q22.3 chr11:98886288-117696649(probes 1027293:1039415) chr11:108529918-108815439(probes 1033186:1033333) chr11:86150866-135006516(probes 1019667:1050671) 1.0855e-06 0.00046508 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 1 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 1 Deletion Peak 14 11q23.3 chr11:101318898-135006516(probes 1029200:1050671) chr11:119491787-119605479(probes 1040574:1040618) chr11:86150866-135006516(probes 1019667:1050671) 2.839e-05 0.0093742 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 1 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 Deletion Peak 15 14q11.2 chr14:20501369-21855250(probes 1180428:1181194) chr14:21618906-21625241(probes 1181073:1181080) chr14:20516395-21828988(probes 1180434:1181179) 0.0050848 0.0075781 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 1 1 0 0 1 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 1 0 0 1 0 1 0 1 1 0 0 1 1 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 Deletion Peak 16 14q24.2 chr14:1-107349540(probes 1180427:1229588) chr14:73695958-73745386(probes 1210011:1210047) chr14:73721246-73722028(probes 1210030:1210031) 0.085174 0.25777 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 1 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 1 0 0 1 0 1 0 1 1 0 0 1 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 Deletion Peak 17 15q13.3 chr15:1-64450037(probes 1229589:1252464) chr15:31772435-32931903(probes 1232649:1232797) chr15:31851257-31856553(probes 1232724:1232725) 0.2062 0.20764 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 1 1 0 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 Deletion Peak 18 16q24.2 chr16:76501610-90354753(probes 1305521:1314303) chr16:87115781-87352842(probes 1313595:1313782) chr16:78500946-90354753(probes 1307152:1314303) 0.0042101 0.0044257 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Deletion Peak 19 19p13.3 chr19:1171151-4230222(probes 1393582:1394348) chr19:3974966-4040592(probes 1394300:1394316) chr19:3957922-4040592(probes 1394298:1394316) 0.058467 0.058117 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Deletion Peak 20 19q13.42 chr19:36730042-59128983(probes 1407954:1417118) chr19:55000922-55029446(probes 1415215:1415225) chr19:55013772-55029446(probes 1415218:1415225) 0.054726 0.053404 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Deletion Peak 21 22q12.2 chr22:29969457-30128393(probes 1479312:1479377) chr22:29984760-30102685(probes 1479319:1479367) chr22:30048593-30057573(probes 1479342:1479349) 0.057928 0.058117 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 1 0 1 0 1 0 0 0 0 1 1 0 0 0 0 1 1 0 0 1 1 0 0 0 0 1 1 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 1 1 0 1 0 1 0 0 1 0 0 1 1 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 1 0 0 0 0 1 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 Amplification Peak 1 - CN values 2p23.2 chr2:27910707-28747666(probes 145369:145813) chr2:27990933-28007826(probes 145393:145399) chr2:27990933-28014318(probes 145393:145402) 0.13274 0.13274 Actual Copy Change Given 0.01089 -0.0099715 0.0035651 0.0041632 0.48475 0.011159 0.010424 -0.0071139 0.0015255 0.0027745 0.0084743 0 0.0114 0.0075 -0.0045566 0.0046921 0.0022193 0.0036076 0 0.004713 0.013074 0.0015255 0.00055459 0.0026357 -0.0042523 -0.55777 0.00055459 -0.0051227 0.14159 0.0036076 0.011818 0.0043021 0.0068044 0.016286 -0.68797 0.018383 -0.0027707 -0.0070576 0.36707 0 0.00083195 0.0040243 -0.79811 0 0.010146 0.0037465 -0.006505 -0.045906 -0.0076531 0.0086135 0.0056919 0.00027728 0.075146 0.0020805 -0.0011087 0.00027728 -0.0012473 0.0083351 -0.00074193 0.013353 0.0068915 0.0037465 0.010006 0.0081516 0.0078805 0.71095 -0.76672 0.93549 0.64702 3.6569 0.029747 0.0069435 0.012655 0.014888 1.8968 0 0.012868 0.86156 8.6338e-05 0.0045347 -0.018902 0.014833 0.83117 0 0.39937 0.0058924 0.00076069 0.0024969 0.008892 -0.0015243 0 -0.018765 0.010703 0.02539 0.021004 0.017264 0.0070826 0.68552 0.013266 0.010057 0.0052749 0.012746 0.57809 0.085654 0.019363 0.01447 0.015308 0.29361 0.010703 0.0054139 0.020343 0.014051 0.012808 0 -0.37414 -0.0070576 0.011261 -0.86633 0.020903 0.013492 0.016985 0.044789 0.0074473 0.0087528 0 0.013632 0.093185 0.0011093 0.0058585 0.012097 0.0114 0.16685 0.60214 0.22916 0.00458 0.012516 0.54894 0 0 0.0030522 0.010842 0.013353 0.013632 -0.0081624 0.003191 0.00055459 0.0097276 -0.0070576 0.011539 0.019363 0.70951 0.0027881 0.0071184 0.0038854 0.0039895 -0.0029091 -0.0016629 0.0019418 0.0022193 0.0094491 -0.0053992 -0.0017751 0.80597 0.0039604 0 0.011539 0.015501 0.013492 -0.0088526 0 0.020343 0.62385 0.003538 0.46838 0.66087 -0.76415 0.0078526 0.61089 0.016006 -0.0022168 -0.027124 -0.01849 0.017824 0.013772 0.53432 1.3806 0.0093098 0.011958 0.003191 0.38882 0.0020805 0.0043869 0.00060546 0.62825 0.0052373 0.0087528 0 0.0094491 0.0023414 0.11976 0.34551 0.0033299 0.75949 0.00597 0.0086135 0.010146 0.62432 0.00458 0.90754 0.00597 0.0065262 0.0066653 0.00041593 0.0080567 0.0073609 0.00075411 0.0079175 0.0012481 0.002957 -0.00072027 0.2749 0.72263 0.71297 0.60593 0.011121 0 0 0.010146 0.010703 0.010146 0.00096444 -0.00047865 0.0095883 0.0086135 0.012733 0.13786 0.013911 0.45905 0.00013863 0.0070826 0.0077783 0.004719 0 0.00055459 0.79413 0.13158 0.0093098 0.0041632 0.0060848 0.60774 0 0.0097276 0.018803 -0.00055444 0.017404 0.13616 0.01967 0.034959 0.0097276 0 0.0058309 0.30865 0.0094491 0.0065262 -0.0086635 0.013772 0.0072207 -0.010328 0.0081959 0.0098669 0.011679 0.0074374 0.011818 0.013074 0.011261 0.0041632 0.37973 0.00073726 0.0042748 0.0019418 0.014888 0.015447 0.0046776 0.0068044 0.0058804 0.013911 -0.0033128 -0.0022168 Amplification Peak 2 - CN values 2q32.1 chr2:185805454-186960953(probes 227580:227814) chr2:186298225-186912586(probes 227772:227786) chr2:171448381-243199373(probes 219044:259416) 0.0016379 0.0016379 Actual Copy Change Given 0.011121 0.0080567 0.0035651 0.0041632 0.48475 0.01419 0.010424 0.0055529 0.0012481 0.0027745 0.0084743 0 0 0.0075 -0.0046479 -0.00032601 0.0081959 0.00069327 0 0.0097217 0.013074 0.14221 0.028623 0.010285 0.0089329 -0.56336 0 -0.0051227 0.027216 -0.0011057 0.011818 0.0042521 0.013213 0.016286 0.030732 0.018383 0.012516 -0.0070576 0.34534 0 -0.0062742 0.0022193 -0.79017 0 -0.0051227 0.0037465 -0.0026322 0.0036076 0.39031 0.0086135 0.0056919 0.00027728 0.078727 0.0020805 -0.0022341 0.00027728 0.032281 0.018383 0 0.013353 0.0034102 0.0037465 0.010006 0.0081516 0.007463 0.71095 0.86831 0.93305 0.64702 3.6569 0 0.0069435 0.022206 0.020343 0.83273 0 0.012868 0.86156 0.014836 0.0045347 0.45139 0.028847 0.83117 0 0.41171 0.014671 0.011573 0.0084743 0.008892 -0.0015243 0 0.60851 0.010061 0.049006 0.021004 0.014051 0.0070826 0.68552 0.020903 -0.012083 0.0065262 -0.0015731 0.59458 0.088548 0.019363 0.01447 0.015308 0.27761 0.0034052 0.0054139 0.020343 0.62989 0.015321 0 0.027638 0.0015255 -0.010851 3.0027 0.020903 0.016425 0.019083 0.051103 0.0074473 0.0055529 0.60792 0.013632 0.093185 0.0070894 0.0022468 0.012097 0.032845 0.1679 0.60214 0.23457 -0.0081624 0.012516 0.54894 0 0 -0.0023456 0.010842 0.013353 -0.03749 -0.0081624 0.003191 0.00055459 0.0097276 -0.024251 0.026654 0.019363 0.70248 0.0027881 0.023573 0.0069435 0.0039895 0.0066653 0.00041593 0.0087528 0.0022193 0.0094491 0.36986 0.0031243 2.3787 0.00597 0 0.0088962 0.015501 0.013492 -0.008967 0.019363 0.020343 0.62385 0.00097064 0.46838 0.65792 0.019831 0.0018771 0.59951 0.0015255 -0.0025599 -0.036265 0.72433 0.017824 0.013772 0.53432 -0.013665 0.0093098 0.011958 0.003191 0.42167 -0.005281 0.0043021 0.00060546 0.6177 0.0052373 0.0087528 0 0.0094491 0.0023414 -0.20672 0.33087 0.003157 0.75949 0.00597 0.0071584 0.010146 0.6297 0.00458 0.3512 0.00597 0.0024565 0.0066653 0.00041593 0.0080567 0.0073609 0.008892 0.0079175 0.0026357 0.002957 0.0027472 0.2749 0.71697 0.71297 0.60593 0.011121 0.012237 0.0069435 0.010146 0.010703 0.012516 -0.016127 -0.00047865 0.0095883 0.0084942 0.022172 0.15308 0.017684 0.45905 0 0.0070826 0.0077783 0.0080567 0 -0.00097017 0.79878 0.59925 0.0093098 0.0041632 0.014166 0.60774 0.029466 -0.0033243 0.018803 -0.0029091 0.017404 0.14868 0.023286 0.034959 0.0097276 0.018587 0.0076392 0.31001 0.0094491 0.0065262 -0.0086635 0.013772 0.0072207 0.76913 0.0081959 0.0098669 0.016425 0.024625 0.019923 0.013074 0.011261 0.0041632 0.37397 -0.0037914 0.0042748 0.0019418 0.014888 0.0055529 0.0080761 0.0068044 0.0091705 0.013911 0.017264 -0.0022168 Amplification Peak 3 - CN values 3q26.31 chr3:145785598-198022430(probes 339130:365376) chr3:171998244-172169406(probes 352359:352492) chr3:171998244-172181180(probes 352359:352495) 0.15981 0.15981 Actual Copy Change Given 0.20901 0.018243 0.68649 1.7051 0.61643 0.8296 0.0098669 0.0069435 0.0012481 -0.0076101 -0.014734 -0.5655 0.026373 0.056513 0.0065262 0.030881 0.00041593 -0.00055444 0.0071666 0.0033239 0.071822 0.0022193 -0.0048757 0.011958 0.0064279 0 -0.038578 -0.0085766 0.0029133 0.006109 0.80519 0.0012481 0.0026357 0.75108 0.098997 0.87966 0.0087528 -0.0038779 -0.41608 0.15696 0.53626 0.0043021 0.024954 0.015168 0.12093 0 0.0016642 0 0.0048579 0.0070971 0.0043021 0.0023581 0.0034687 0.021043 0.63153 -0.014137 0.026935 0.77291 0.00069327 0.83805 0.76389 0.026654 0.41379 0.74347 0.48264 0.75223 0.085221 0.99571 0.69927 -0.0083488 0.026846 0.053237 0.71039 0.3592 -0.0080338 -0.00027724 0.81269 0.9017 0.0016119 -0.0026774 -0.010922 0.010926 0.90412 -0.0088526 0.47813 0.70127 -0.0063339 0.0026357 0.0065262 0.0022193 -0.013564 0.6257 0.004719 0.074121 0.76364 -0.0098942 0.003191 0.71754 -0.0091286 0.6051 0.075715 0.021134 0.57728 0.84771 0.77195 0.58399 0.78331 0.15438 0.0080567 -0.00085613 0 0.0086135 0.75626 -0.0011087 0.021183 0.0054139 0.070673 -0.00055444 0.021043 0.0043858 0.59818 -0.57397 0 -0.0069785 -0.011473 0.59458 -0.029721 0.0023581 -0.030923 0.60503 -0.02056 -0.0034627 0.00041593 0.01447 -0.0088526 0.64751 0.59566 -0.017803 0.00069327 0.0019418 0.024408 0.0055529 0.00027728 0.056085 0 0.0030522 0.61063 -0.022426 0.54136 -0.0083005 -0.031632 0.0082095 0.84652 0.12167 0.30889 0.0036844 -0.0056757 0.0068044 0.0030522 0.67244 1.1009 0.17009 0.8481 0.085365 0.61208 0.62351 0.045991 0.0066653 0.022304 0.20901 0.82196 -0.015078 -0.00013862 -0.33671 0.69055 0.00069327 1.8245 -0.0054794 0 0.008892 0.01447 0.020763 -0.0019399 1.0117 -0.4549 0.81962 0.005583 0.83215 0.0077783 -0.18672 0 0.00041593 0.00041387 0.6642 0.00027728 0.40261 -0.0028927 0.35661 0.90656 0.77849 0.35692 0.0036076 0.8085 0.0023116 -0.01736 0.63153 -0.0043901 -0.0012473 0.49614 0.48992 -0.0011199 0.0013868 0.71886 0.0087528 0.0058309 0.0069435 0.0044411 0 0.014749 0.0060817 0.29024 0.76255 0.75427 0.69428 -0.003712 0.0045244 0.0035957 0.0055529 0.011539 0.0091705 -0.0091348 -0.0036011 0.00083195 0.90895 0.82609 0.036512 0.22206 0 0.0095883 -0.00092962 0.72962 0.84534 0.003191 0 0.85918 0.23923 0.061937 0.013772 0.0067802 0.63408 0.047126 -0.010784 0.14073 -0.00027724 0.62843 0.86612 -0.0071789 0.78292 0.0077783 0.023069 0.0034687 0.70307 0.00069327 0.39065 0.47015 0.004719 0.026316 0.012976 0.00458 0.75375 0.7922 0.94051 0.0063871 0.438 0.83107 0.77907 0.27505 -0.029404 -0.011285 0 0.76063 -0.0029091 0.0022193 0.0030522 0.0013868 0.77252 0.010424 -0.0019399 Amplification Peak 4 - CN values 5q35.3 chr5:136441083-180915260(probes 540923:567562) chr5:176723681-176784511(probes 565938:565970) chr5:169011114-180915260(probes 561315:567562) 0.069756 0.069756 Actual Copy Change Given 0.23241 -0.0038779 -0.019452 -0.020824 -0.017116 -0.010922 -0.00013862 -0.0022168 0.0054139 0.0048579 0.00041593 0.017824 0.025531 0.010006 0.49735 -0.0026244 -0.0037395 0 0.0059149 -0.0047138 0 0.41031 -0.0025408 0.0012481 0 0.50116 0.00041593 -0.0013858 0.0084743 0.0055529 -0.00027724 -0.0008316 -0.00069303 0.0015255 0.68533 -0.0051227 0.00027728 0.0091705 0.93549 -0.00027724 -0.014228 0.00069327 0.021284 -0.40374 -0.47818 0 0.001803 0.0016642 0.0043021 -0.055499 0 0.0013868 -0.022881 0 0.0020805 0.7317 -0.017936 -0.026714 -0.0012473 0.0033299 0.77964 -0.014641 0 -0.016017 0.49939 -0.019934 0.82373 -0.028628 -0.0077359 -0.0038779 0.047552 -0.0049844 -0.0018014 -0.0070576 3.1014 -0.0020784 -0.0051885 -0.020647 -0.0082145 0.31108 -0.010922 -0.49218 -0.0034627 0.32157 -0.00061892 -0.00021595 -0.012977 -0.00013862 -0.011749 0.006109 0.50759 -0.0036011 -0.011749 0.023078 -0.014385 -0.98421 -0.012713 -0.010094 -0.0096349 -0.018577 -0.011398 -0.0093153 0.56205 -0.018824 -0.0011087 -0.0040162 -0.017529 0.008918 0 0 0.97317 0 -0.0091069 -0.0036011 -0.0083005 0.011818 0.042874 0.032845 -0.80078 0.0066653 -0.013465 0.05281 0.0028607 -0.0047079 -0.0095426 -0.0029429 1.1643 0.00071875 0.014078 0.57755 1.5203 0.78678 -0.0089515 -0.2869 0.0416 -0.0012473 -0.017803 0.0015699 0.00069327 -0.0019399 0 0.00027728 0.060794 -0.0076101 0.0072217 -0.0048461 0.00083195 0.063795 0 0 -0.016567 0.017558 -0.01354 -0.0045695 0.3198 0.0049969 -0.01857 0 -0.00041585 -0.0051227 -0.33295 -0.0028371 -0.016567 0 -0.00041585 -0.0053332 0.99089 0 -0.75098 0.18495 -0.0082872 -0.016127 0.49666 0.11213 -0.0041546 -0.00025009 0.0016766 -0.0090706 0.0033299 0.00083195 0.0063871 0.016565 0 -0.066857 0.58453 0.62752 -0.00097017 -0.0053992 0.0072217 -0.5009 -0.0018014 0.37858 -0.0044312 -0.0041546 -0.010706 -0.0029091 -0.0020784 0.27111 -0.0098042 -0.32878 0 0.001803 -0.0092666 0.0012481 0.41362 -0.0023553 0.00013863 0.78176 0.4049 -0.0022168 0.0016642 0 -0.0059522 0 -0.0015243 0.0065262 0.006109 -0.0031859 0.016705 -0.014063 0.29167 -0.0073803 -0.0064064 0 -0.0011087 0.0030522 0.0044411 -0.010293 -0.027945 -0.00041585 -0.0065112 0.0020805 0.004719 0.19299 -0.0042855 0 -0.24606 0.49009 0.00013863 0.0044411 0.0015255 -0.0065798 -0.0027707 0.00083195 -0.0083005 0.10497 -0.034631 -0.01354 -0.0034868 -0.0066432 -0.07921 0 -0.00041585 0 0.00055459 0.88686 -0.012411 -0.016841 -0.012248 0.071169 -0.0060904 -0.0070576 0.00458 0.00027728 -0.015828 -0.01335 0.0069425 0.032465 -0.006505 -0.054151 0.0022193 -0.018219 -0.0012663 0 0.0037465 -0.0088526 -0.0066432 0.065845 -0.0094923 0.0023581 -0.0096849 -0.017529 -0.00013862 -0.0062286 -0.0043651 -0.0049844 0.0011093 0.00069327 Amplification Peak 5 - CN values 7p11.2 chr7:56595049-57921703(probes 696656:696757) chr7:56595194-57198660(probes 696657:696729) chr7:56595194-57205766(probes 696657:696732) 0.18303 0.18303 Actual Copy Change Given 0.38634 0.68107 -0.0076101 2.4968 0.62661 0.83777 1.7435 0.0040243 -0.00097017 0.75528 1.617 0.0114 0.027919 0.0048579 -0.0015243 1.4793 1.1176 -0.0023553 0.0071666 0.79045 1.6282 1.3644 0.76342 0.54711 0.90861 0.55584 0.0013868 0.73454 0.0044411 -0.0036011 0.78205 -0.027261 0.80208 0.73834 0.031436 0.86712 1.2016 0.0038854 0.34193 0.0011093 0.52608 0.6081 0.012934 0.013213 0.022865 0.79462 0.0013868 0.64708 -0.00013862 1.534 0.76799 -0.005261 0 0.59494 0.66087 -0.0095426 0.72848 0.77984 0.0015255 0.80955 0.94752 0.84518 -0.0096806 0.73891 -0.0036379 1.5426 0.7983 2.0685 1.3672 -0.0069195 -0.54865 1.5749 0.71237 1.0641 0.68184 -0.0013858 1.5812 0.89527 0.82641 -0.0083455 0.47162 0.218 0.88426 -0.011473 0.010778 1.363 0.80894 0 0.92777 0 0.53415 0.63499 0.69839 0.064713 0.72635 -0.038578 0.37891 1.451 1.3573 0.46525 1.1981 -0.012211 0.54224 1.6925 0.78311 0.58865 0.76665 -0.00038992 0.87149 0.004719 -0.040373 -0.0020784 1.4803 -0.0063668 -0.0044312 0.0058309 0 -0.0066432 0.024969 -0.0045695 0.60708 0.060365 -0.0061428 0.46209 -0.0077482 -0.0042929 0.38825 -0.0030475 0.30381 -0.012713 1.5089 0.60304 -0.0078863 0.17001 0.8566 0.64836 0.60124 0.0062481 0.00069327 -0.0051886 1.0063 -0.0024938 -0.00097017 0.0069435 -0.00069303 0.4326 0.61516 0.79658 0.19217 0.89026 1.5054 0.54967 0.84115 0.68328 0.31562 0 1.4632 0.58363 0.72131 0.69409 0.010424 0.37768 1.6861 0.41898 -0.0015243 0.74563 0.0027745 1.1208 0.0068044 0.20305 0.82206 0.68828 -0.0040162 0.51594 0.70176 -0.0024938 0.020137 1.2674 0 -0.0067813 0.038489 0.79626 1.7884 0.99821 0.58184 0.015028 0.85403 0.83078 0 0.20353 0.80298 -0.0018014 0.84435 0.69623 -0.0036011 0.41312 -0.0024938 0.35643 1.5677 0.53011 0.38237 0.80442 1.6296 0.97337 -0.0011087 0.63664 -0.0030475 -0.0027707 0.42581 0.046417 0.51594 0.4681 -0.0031023 -0.0063668 1.5876 0.72187 0.86156 1.1177 0.0086135 0.0026084 0.41128 1.5532 0.76364 1.3648 1.7184 -0.0038779 0.0037465 1.6599 -0.00013862 -0.00069303 -0.010514 0.0020805 1.4822 -0.0054297 1.6324 0.040609 0.0066653 -0.011565 -0.0055375 0.70232 0.77483 -0.0093073 -0.0094046 -0.0023553 0.85008 0.13643 1.5615 0.8982 0.73053 0.65811 -0.0069815 0.16745 1.4534 -0.0015243 0.62206 0.87209 0.67409 1.5047 1.6859 0.057123 0.98473 0.71302 3.6569 1.0432 0.48654 0.67437 0.035046 -0.01019 1.5421 -0.0083005 1.3582 0.94804 1.4529 1.4459 0.82745 0.79374 0.74364 -0.00051945 -0.00091965 -0.017116 0.76427 0.53661 -0.0018014 0.58018 1.2846 -0.0038507 0.84968 -0.0022168 Amplification Peak 6 - CN values 7q31.2 chr7:115065872-116807349(probes 721483:722626) chr7:116382931-116535003(probes 722350:722491) chr7:112950348-123412639(probes 720439:726172) 0.0001518 0.0001518 Actual Copy Change Given 0.38634 0.74024 -0.0076101 2.4968 0.62661 0.83866 2.3663 0.0040243 -0.00097017 0.75528 1.6071 0.010285 0.018243 0.00458 -0.0015243 2.6435 1.1173 -0.0023553 0.0071666 0.79045 1.649 1.372 0.77522 0.57558 0.91005 0.55124 0.0013868 0.73454 0.0044411 -0.0036011 0.78205 3.6569 0.80208 0.73834 0.031436 0.86712 1.2052 0.0038854 0.34193 0.0011093 0.52608 0.6081 0.012934 0.013213 0.021926 0.80383 0.00083055 0.64708 -0.00013862 1.534 0.76291 -0.005261 0 0.59494 0.66087 -0.0095426 0.72848 0.77984 0.0015255 0.84692 0.94752 0.84652 -0.0096806 0.73891 -0.0036379 1.4141 0.80461 2.0499 1.3672 -0.0069195 -0.54865 1.5749 0.71237 1.0641 -0.0067324 -0.0013858 1.5989 0.89527 0.85574 -0.0083401 0.47162 0.21217 0.88426 -0.011473 0.0042375 1.363 0.80894 0.0038854 0.93895 0 0.53415 0.63499 0.69839 0.064713 0.75275 0.0015255 0.37891 1.4502 1.3606 0.46525 1.1981 3.0921 0.54118 1.7082 0.78311 0.58775 0.7781 -0.00038992 0.87149 0.004719 -0.025483 -0.0020784 1.4803 -0.0063668 -0.0044312 0.0058309 0 -0.0066432 0.018125 -0.0045695 0.60538 0.060365 -0.0094341 0.46209 -0.011996 -0.0042929 0.38825 -0.0030475 0.30381 -0.012713 1.5127 0.15144 -0.0078863 0.17001 0.8566 0.64836 0.60124 0.0062481 0.0024969 -0.0051886 1.0063 -0.0024938 -0.00097017 0.0012622 -0.00069303 0.4326 0.61516 0.79658 0.31193 2.541 1.5162 0.54967 0.85938 0.68328 0.31177 0 1.4541 0.57992 0.72131 0.69409 0.018663 0.3729 1.6861 0.41898 -0.0015243 0.74563 0.019783 1.1208 0.015168 0.21437 0.82784 0.68791 -0.0040162 0.51594 0.70176 -0.0024938 0.5673 1.2674 0 -0.0067813 0.038489 0.79626 1.7884 0.99821 0.58184 0.015028 0.85403 0.83498 0 0.20353 0.80298 -0.0018014 0.84435 0.69623 -0.0036011 0.41312 -0.0016629 0.35643 1.5677 0.53011 0.38237 0.80442 1.6296 1.9616 -0.0011087 0.63664 -0.0030475 -0.0027707 0.42581 0.046417 0.51594 0.47821 -0.0031023 -0.0063668 1.5876 0.72187 0.86156 1.1177 0.0086135 0.0026084 0.41128 1.5532 0.76364 1.3648 1.711 -0.0038779 0.0037465 1.6599 0.0040243 -0.0045695 -0.015211 0.0020805 1.4822 -0.0044312 1.6324 0.064082 0.011818 -0.0037395 -0.0055375 0.70232 2.0857 -0.0040162 -0.0094046 -0.0023553 0.85008 0.13643 1.5769 0.91103 0.73053 0.65811 0.028341 0.16745 1.4534 -0.0015243 0.63262 0.87209 0.67623 1.5047 1.6859 0.057123 0.98473 0.71302 3.6569 1.0582 0.48654 0.67493 0.035046 -0.01019 1.5421 -0.0083005 1.3582 0.94804 1.4529 1.4459 0.82745 0.79374 0.75757 -0.00064907 -0.0052106 -0.0070934 0.76427 0.53661 -0.0018014 0.60142 1.2846 -0.0038507 0.86572 -0.0022168 Amplification Peak 7 - CN values 17q23.2 chr17:43511539-81195210(probes 1332031:1351016) chr17:59658121-61353004(probes 1340317:1341053) chr17:57700582-62242677(probes 1339360:1341476) 0.14801 0.14801 Actual Copy Change Given 0.16475 0.66974 0.67752 0.88926 0.62079 0.8202 0.7951 -0.012576 0.0024969 0.72584 0.79549 0.045141 1.2069 -0.024388 0.0043021 0.0068123 0.53942 -0.00055444 0.0081407 0.74673 0.78331 0.67196 0.67048 0.51246 0.84717 0.0351 0.029184 0.057939 -0.014228 -0.012989 0.77291 0.72112 0.70457 0.68943 0.60846 0.81571 0.56259 -0.012438 0.80158 0.058795 0.035947 0.55018 -0.82081 0.40211 -0.0070576 0.79743 0.034959 0.54718 0.37134 0.73663 0.70738 0.0022193 0.59701 0.54436 -0.0024938 0.73379 0.62242 0.74347 -0.0019399 0.78601 0.79038 0.74214 0.38535 0.74219 0.0089942 0.7683 0.69933 0.99841 0.69833 0.81201 0.079447 0.74176 0.64158 0.43564 3.6569 0.0079175 0.75481 0.9162 0.81115 0.0161 0.01419 0.3154 0.83884 0.017264 0.47504 0.66594 0.73497 0.86314 0.85977 0.62479 0.01433 0.6211 0.66364 0.037359 0.69628 1.6118 0.35055 0.73057 0.68161 0.63141 0.61643 0.042399 1.1985 0.83157 0.78987 0.55992 0.67178 0.10631 0.83196 0.052383 1.8764 0.010703 0.74044 0.013213 0.76159 -0.021647 0.11932 0.00069327 0.016985 0.77272 0.58184 0 -0.00033582 0.023426 0.064654 0.57648 0.4657 0.35659 -0.035013 0.6844 1.4091 0.73644 0.81786 0.0016642 0.053379 0.62661 1.1372 0.020581 -0.0049844 0.018803 0.87847 0.64194 0.047268 0.02511 0.75738 -0.0059522 0.59062 0.037675 0.49604 0.80733 0.77618 0.50135 0.78582 0.65498 0.30809 0.87807 0.7013 0.53204 0.65756 0.65866 0.74138 0.15539 0.86572 0.38436 0.013772 0.7198 -0.017803 0.54912 0.0094491 0.15367 0.76504 0.68735 0.00014819 1.3519 1.3748 -0.0038779 0.80919 1.2568 0.43648 0.048669 0.016985 0.11015 0.8705 0.88607 0.56418 1.2596 0.80792 0.8163 -0.021647 0.40028 0.040751 0.35643 0.79956 1.3652 0.73473 0.41028 0.0037465 0.34145 0.88408 0 0.71754 0.76389 0.79878 0.89407 0.040326 0.59836 0.65866 0.012516 0.60286 0.053094 0.48509 0.44681 0.01419 0.66106 0.78563 0.67178 0.80422 0.54118 0.20779 0.8384 0.29326 0.77964 1.459 0.63755 0.8351 0.74499 0.73341 0.7708 -0.031768 0.022725 0.038482 0.00055459 0.7372 -0.0045482 0.79627 -0.048342 0.19117 0.50411 0.0027745 -0.017116 0.81474 0.0055529 0.016705 0.032704 0.82608 0.94115 0.73644 0.8483 0.68381 0.62279 0.76504 0.038065 0.70645 -0.0087146 0.60485 0.86533 0.69092 0.72074 0.83255 0.00061784 0.91764 0.68887 0.80383 0.51072 0.07898 0.62533 0.67901 0.023188 0.76734 0.67493 0.76121 0.85275 0.71152 0.68887 0.7507 0.0030522 0.33092 0.0064312 0.59986 -0.017529 0.70232 0.013632 -0.0018014 0.55443 0.65093 0.051387 0.75223 0.0073609 Deletion Peak 1 - CN values 1p36.31 chr1:1-29472434(probes 1:13540) chr1:6261872-6281666(probes 1954:1962) chr1:1-48411005(probes 1:23744) 1.462e-09 1.462e-09 Actual Copy Change Given -0.0022168 -0.0083005 0.0087528 0.0048579 -0.0044463 -0.0057238 -0.016567 -0.85043 -0.00055444 -0.0056757 -0.00013862 -0.55477 -0.40926 -0.036721 -0.0016629 -0.0017935 -0.0049844 0.00069327 -0.006836 -0.0052669 -0.0063668 -0.0042166 -0.048748 -0.022881 -0.014188 -0.57684 -0.087579 0.0058309 -0.0033243 -0.0027707 -0.14271 -0.0056757 -0.025814 -0.0055375 -0.69432 -0.0066432 -0.02384 -0.76355 -0.45831 -0.0022168 0.01419 -0.038306 -0.82242 -0.42046 -0.00069303 -0.0020784 -0.65984 -0.020138 -0.0013858 -0.0059522 -0.007472 -0.00055444 -0.036538 -0.018567 -0.0042929 -0.77931 -0.043873 -0.0034627 0.0062481 -0.0073339 -0.0083005 -0.024569 -0.014275 0 0.0091335 -0.0044312 -0.041974 -0.022332 -0.75903 0.00023808 -0.52818 0.00097064 -0.010145 -0.007715 -0.49476 -0.0030475 -0.0082281 -0.00097017 -0.029176 0.0027293 0.017684 -0.60423 -0.017611 0.022865 -0.50292 -0.0018786 -0.021711 -0.024321 -0.020549 0.0030522 0.0069435 -0.0016629 -0.02603 -0.85241 -0.01165 0.008892 -0.003694 -0.00041585 0.0062481 -0.010684 0.00083195 -0.66108 -0.025085 -0.067727 -0.0019399 -0.0055375 -0.033388 -0.39717 -0.026988 -0.50888 -0.077248 -0.62662 -0.0052477 0.014058 -0.38929 -0.0094046 -0.65435 0 -0.1564 0 -0.021921 -0.61651 -0.0025462 0.0040243 -0.64621 -0.0049844 -0.042517 -0.41025 0.0033574 -0.68296 -0.082934 -0.070269 -0.012024 -0.30216 -0.86931 -0.02075 -0.019589 -0.058462 -0.0012918 0.0068044 -0.080408 -0.023703 -0.7627 0.011121 -0.026577 -0.0041546 -0.029994 0 -0.012851 -0.0053992 -0.0066432 -0.010633 -0.038034 -0.0034627 -0.0020784 -0.016916 -0.0081624 -0.012618 -0.0038779 -0.0037395 -0.017254 0.0021527 -0.0042929 -0.005814 -0.0011087 -0.010893 -0.0040162 -0.0008316 -0.72517 -0.73918 -0.0081624 0.023542 0.003191 -0.31961 0 0 -0.072069 0 0.014888 -0.898 -0.83365 -0.32623 0.0023581 -0.041217 -0.46727 -0.94518 -0.052126 -0.019544 -0.0049844 -0.46142 -0.83849 -0.0036011 -0.0078863 -0.014641 -0.017391 -0.0031859 -0.0015956 -0.0016629 -0.0081481 1.2644 -0.0057234 -0.0080244 -0.005261 -0.012989 -0.39274 -0.006505 -0.0048461 0.0029133 -0.54017 -0.00097017 0.00069327 -0.0056757 -0.0027707 -0.016349 -0.0048461 -0.038572 -0.015466 -0.0047079 -0.4086 0.0019145 -0.00097017 -0.0042929 -0.026069 -0.00013862 -0.0031859 -0.02151 -0.014366 -0.010508 -0.055132 0.0015255 0.0083289 -0.0047079 -0.0045695 -0.014755 0.0025043 -0.07061 -0.24496 -0.018628 0.0044411 -0.010094 -0.0084385 -0.0008316 -0.9873 -0.45447 -0.015652 -0.6192 -0.083997 -0.0089906 -0.010394 -0.0045695 -0.014778 0.029184 -0.00055444 -0.016017 -0.0077482 -0.0024938 -0.0020784 -0.051721 -0.0012473 -0.94785 -0.0084385 -0.00027724 -0.015604 -0.0091238 -0.45207 -0.0034627 -0.089567 -0.8944 -0.0018615 -0.041702 -0.0057293 -0.086843 -0.00055444 -0.014503 -0.034631 0.016985 -0.0099565 -0.23003 0.0012986 -0.042245 -0.0071484 0.010006 0.0015255 -0.044449 -0.0027707 -0.78277 -0.01904 0.006109 Deletion Peak 2 - CN values 2p12 chr2:1-98931728(probes 128606:179794) chr2:81720701-81724877(probes 175523:175524) chr2:81600361-81831868(probes 175471:175597) 0.08832 0.08832 Actual Copy Change Given 0.01089 0.0080567 0.0035651 0.0041632 0.48475 0.011159 0.010424 -0.0071139 0.0012481 0.0027745 0.0084743 0 0.01447 0.0075 -0.0046479 -0.00032601 0.0022193 0.0036076 0 0.0097217 0.013074 0.14221 0.00055459 0.010285 0.0089329 -0.55777 -0.0012842 -0.0051227 0.027216 0.0036076 0.011818 0.0042521 0.0068044 0.016286 -1.2929 0.018383 -0.0026161 -0.0070576 0.44139 0 -0.0062742 0.0040243 -0.79811 0 0.010146 0.0037465 -0.0026322 0.0036076 0 0.0086135 0.0056919 0.00027728 0.078727 0.0020805 -0.0011087 0.00027728 -0.0012473 0.018383 0 0.013353 0.0068915 0.0037465 0.010006 0.0081516 0.007463 0.71095 -0.76672 0.92736 0.64702 0.0072217 0.011958 0.0069435 0.012655 0.020343 0.87765 0 0.012868 0.86156 -0.0052416 0.0045347 -0.018902 0.014833 0.83117 0 0.39937 0.0058924 0.011573 0.0024969 0.008892 -0.0015243 0 -0.018765 0.010703 0.049006 0.021004 0.012233 0.0070826 0.68552 0.013266 0.010057 -0.0056896 0.0081302 0.57809 0.075522 0.019363 0.01447 0.015308 0.29361 0.0051825 0.0054139 0.020343 0.011526 0.012808 0 -0.37414 -0.0070576 0.011261 0.02511 0.020903 0.013492 0.016985 0.044789 0.0074473 0.0087528 -0.67985 0.013632 0.093185 0.0013868 0.0058585 0.012097 0.0114 0.16685 0.60214 0.22916 0.00458 0.012516 0.54894 0 0 0.0020805 0.010842 0.013353 -0.0079638 -0.0081624 0.003191 0.00055459 0.0097276 -0.0070576 0.011539 0.019363 0.70951 0.0027881 0.018017 0.0038854 0.0039895 0.0066653 0.00041593 0.0019418 0.0022193 0.0094491 -0.0053992 0 0.80597 0.0039604 0 0.011539 0.015501 0.013492 -0.0088526 0.031436 0.020343 0.62385 0.003538 0.46838 0.66087 -0.78024 0.0018771 0.61089 0.0015255 -0.0022168 -0.036538 -0.01849 0.017824 0.013772 0.53432 0 0.0093098 0.011958 0.003191 0.40511 0.0020805 0.0043869 0.00060546 0.62333 0.0052373 0.0087528 0 0.0094491 0.0023414 0.11976 0.34551 0.0033299 0.75949 0.00597 0.0071584 0.010146 0.62432 0.00458 0.3512 0.00597 0.0065262 0.0066653 0.00041593 0.0080567 0.0073609 0.008892 0.0079175 0.0026357 0.002957 -0.00072027 0.2749 0.73208 0.71297 0.60593 0.011121 0 0 0.010146 0.010703 0.010146 0.00096444 -0.00047865 0.0095883 0.0057268 0.012733 0.14214 0.017404 0.45905 0 0.0070826 0.0077783 0.004719 0 -0.00097017 0.79413 0.13158 0.0093098 0.0041632 0.0094248 0.60774 0 -0.0033243 0.018803 -0.0029091 0.017404 0.14868 0.023286 0.034959 0.0097276 0 0.0051964 0.30865 0.0094491 0.0065262 -0.0086635 0.013772 0.0072207 -0.91121 0.0081959 0.0098669 0.0087528 0.0074374 0.011818 0.013074 0.011261 0.0041632 0.37924 0 0.0042748 0.0019418 0.014888 0.0055529 0.0046776 0.0068044 0.0091705 0.013911 0.017264 -0.0022168 Deletion Peak 3 - CN values 2q22.1 chr2:140708948-143637838(probes 201139:202981) chr2:140976294-142894275(probes 201273:202544) chr2:141739289-142144022(probes 201713:201967) 0.014385 0.069402 Actual Copy Change Given 0.01089 0.0080567 0.0035651 0.0041632 0.48475 0.01419 0.010424 0.0029133 0.0012481 0.0027745 0.0084743 0 -0.43572 0.0075 -0.0046479 -0.00032601 0.0084743 0.00069327 0 0.0097217 0.013074 0.14221 0.037924 0.010285 0.0089329 -1.2187 0 -0.0051227 0.027216 0.0036076 0.011818 0.0042521 0.0068044 0.016286 0.030732 0.018383 0.012516 -0.0070576 0.44139 0 -0.0062742 0.0040243 -0.79223 0 -0.0051227 0.0037465 -0.0026322 0.0036076 0.013632 0.0086135 0.0056919 0.00027728 0.078727 0.0020805 -0.0011087 0.00027728 0.032281 0.018383 0 0.013353 0.0068915 0.0037465 0.010006 0.0081516 0.007463 0.71095 0.86831 0.93305 0.64702 0.0072217 -0.47522 0.0069435 0.022206 0.020343 -1.0265 0 0.012868 0.86156 0.0049809 0.0045347 0.45139 0.028847 0.83117 0 0.41171 0.014671 0.011573 0.0084743 0.008892 -0.0015243 0 0.60955 0.010703 0.049006 0.021004 0.017124 0.0070826 0.68552 0.015028 0.010057 0.0065262 0.0081302 0.58246 0.088548 0.019363 0.01447 0.015308 0.27761 0.0051825 0.0054139 0.020343 -0.6122 0.015321 0 0.027638 0.0015255 0.019783 -0.91146 0.020903 0.013492 0.016985 0.051103 0.0074473 0.0087528 -0.01849 0.013632 0.093185 -0.36272 0.0022468 0.012097 0.0114 0.16685 0.60214 0.23457 -0.024372 0.012516 0.54894 0 0 0.0020805 0.010842 0.013353 -0.0079638 -0.0081624 0.003191 0.00055459 0.0097276 -0.0070576 0.011539 0.019363 0.70951 0.0027881 0.018017 0.0038854 0.0039895 0.0066653 0.00041593 0.0087528 0.0022193 0.0094491 -0.0053992 0 0.80597 0.0039604 0 0.011539 0.015501 0.013492 -0.0088526 0.019363 0.020343 0.62385 0.00097064 0.46838 0.65792 0.019831 0.0018771 0.59951 0.0015255 -0.0025599 -0.036265 0.72433 0.017824 0.013772 0.53432 0 0.0093098 0.011958 0.003191 0.42167 -0.00069303 0.0043869 0.00060546 0.6177 0.0052373 0.0087528 0 0.0094491 0.0023414 -0.20672 0.33087 0.0033299 0.75949 0.00597 0.0071584 0.010146 0.6297 0.00458 0.3512 0.00597 0.0065262 0.0066653 0.00041593 0.0080567 0.0073609 0.008892 0.0079175 0.0026357 0.002957 -2.7248e-05 0.2749 0.71747 0.71297 0.60593 0.011121 0.012237 0 0.010146 0.010703 0.012516 -0.016127 -0.00047865 0.0095883 0.0079899 0.022172 0.15308 0.015052 0.45905 0 0.0070826 0.0077783 0.004719 0 -0.00097017 0.79413 -0.62846 0.0093098 0.0041632 0.014166 0.60774 0.022304 -0.0033243 0.018803 -0.0029091 0.017404 0.14868 0.023286 0.034959 0.0097276 -0.0033925 0.0051964 0.31001 0.0094491 0.0065262 -0.0086635 0.013772 0.0072207 0.76913 0.0081959 0.0098669 0.017264 0.024625 0.019923 0.013074 0.011261 0.0041632 0.37397 -0.0037914 0.0042748 0.0019418 0.014888 0.0055529 0.0046776 0.0068044 0.0091705 0.013911 0.017264 -0.0022168 Deletion Peak 4 - CN values 2q37.3 chr2:215795572-243199373(probes 243229:259416) chr2:241936269-242035145(probes 259118:259169) chr2:204651800-243199373(probes 236507:259416) 5.174e-05 0.00035375 Actual Copy Change Given 0.011121 0.0059532 0.0040243 0.0041632 0.48475 0.011269 0.010424 -0.01037 0.0012481 0.0027745 0.0084743 0 0.0087528 0.0075 -0.0046479 -0.00032601 -0.012851 0.00069327 0.004386 0.0097217 0.013074 0.14384 -0.011611 -0.0032067 0.0089329 -0.56336 0 -0.0051227 0.027216 -0.0047079 0.0040243 0.0042521 0.013213 0.016286 0.030732 0.016425 0.012516 -0.0070576 -0.040209 0 -0.0062742 0.0022193 -0.79017 0 -0.0051227 0.0037465 -0.0026322 0.0036076 -0.39074 0.0086135 0.0056919 0.00027728 0.078727 -0.040878 -0.0022341 0.00027728 -0.017865 0.018383 0 0.013353 0.0034102 -0.013264 0.0090117 0.041034 0.007463 0.71095 0.74518 0.92027 0.64702 -0.9756 0 0.0069435 0.010424 0.020343 0.83116 0 0.0056793 0.86156 -0.0016317 0.0045347 0.45139 0.028847 0.82673 0 0.41171 0.014671 0 0.0084743 0.008892 -0.0015243 0 0.60851 0.010061 0.049006 0.021004 -0.19637 0.0070826 0.68552 0.020903 0.015638 0.0065262 -0.0015731 -0.69839 0.060079 0.019363 0.01447 -0.017941 0.29331 0.0034052 0.0079175 0.020343 -0.61959 0.015321 0 0.01433 0.0015255 0.029325 -0.86026 0.014862 0.016425 0.019083 0.051103 0.0074473 0.0055529 0.6727 0.013632 0.093185 0.0010412 0.0022468 0.012097 0.032845 0.1679 0.60214 0.23457 -0.0081624 0.012516 0.54894 0 0 0.014749 0.010842 0.013353 0.016565 -0.0081624 0.003191 0.00055459 0.0024565 0.046842 -0.0051227 0.019363 0.70248 0.0027881 0.023573 0.0069435 0.0097276 0.0066653 0.00041593 0.0087528 0.0022193 0.0094491 0.0058309 -0.0064332 0.80442 0.00597 0 0.0088962 0.0032094 0.013492 -0.010922 0.019363 0.020343 0.62385 0.00097064 0.47358 0.65792 0.020483 -0.0010347 0.59951 0.0015255 0.011539 -0.036265 0.72433 0.017824 -0.036668 0.53432 -0.013665 0.0093098 0.011958 0.003191 0.42167 -0.005281 0.0043021 0.00060546 0.6177 -0.0011087 0.0087528 0 0.0011093 0.0023414 -0.88363 0.33087 0.003157 0.75949 0.00597 0.0071584 0.010146 0.6297 0.00458 0.3512 0.00597 0.0024565 0.0066653 0.0020853 0.0080567 0.0073609 -0.015054 0.0079175 -0.0065229 0.010424 -0.0032131 0.2749 0.71697 0.71297 0.60593 0.011121 0.012237 -0.015121 0.010146 0.010703 -0.72093 0.027491 0.00041593 0.0095883 0.012516 0.022172 0.15308 0.017684 0.45905 0 0.0079175 0.0077783 0.025952 0 -0.00097017 0.78879 -0.63651 0.0093098 0.0041632 0.014166 0.60774 0.029466 -0.0033243 0.018803 -0.0029091 0.017404 0.16205 0.023286 0.014455 0.0097276 0.018587 0.0076392 0.31001 0.0094491 0.0065262 0.019974 -0.011587 0.0072207 0.76913 0.0081959 0.0098669 0.016425 -0.019376 0.019923 0.013074 -0.0034627 0.0041632 0.37677 0.0075442 0.0056036 0.0019418 0.014888 0.0055529 0.0080761 0.0068044 0.0091705 -0.80782 -0.057594 -0.0022168 Deletion Peak 5 - CN values 3p22.1 chr3:41280645-41732267(probes 282819:283013) chr3:41286244-42218893(probes 282820:283079) chr3:41611229-41613346(probes 282950:282951) 0.0024404 0.002385 Actual Copy Change Given 0.20901 0.018243 -0.0053992 -0.018282 0.6141 0.82317 -0.00085183 0.0069435 0.0016642 -0.0076101 -0.019032 -0.5655 -0.41322 0.011679 -0.50536 -0.0027277 0.00041593 -0.00055444 -0.069465 0.0015935 0.067375 0.0022193 -0.0060904 -0.0008316 -0.0024308 0.011261 -0.038578 0.0024969 0.0034687 0.006109 0.78454 0.0012481 0.0026357 0.74756 -0.70997 -0.0022168 0.0087528 -0.0038779 -0.41608 0.15696 -0.0020784 0.0043021 0.018943 0.015168 0.15651 0 0.023426 0 0.0048579 0.0081959 0.0043021 0.0023581 -0.0051227 0.0096418 -0.0062286 -0.0016629 0.0075 0.77016 -0.00014411 -0.010922 0.76389 -0.0055375 0.41379 0.74632 0.47801 0.75223 -0.78623 1.0022 -0.0036473 -0.0083488 -0.54623 0.053237 0.70832 0 -0.07271 -0.00027724 0.79152 0.9017 0.0016119 -0.33219 -0.0048461 0.0038302 0.88913 -0.0088526 0.47813 -0.004785 0.0023911 0.0026357 0.0065262 0.0022193 -0.005814 0.6257 0.004719 0.074121 0.74912 0.0034687 0.003191 0.71754 0.0015255 -0.0089401 0.076739 0.0040896 0.57952 0.82804 0.77195 0.58399 0.75631 -0.32121 0.0080567 0.0073609 0 -0.62255 0.74769 -0.0011087 0.0077783 -0.0054305 -0.67994 -0.00055444 0.021043 0.0043858 0.59818 -0.56366 0.0075864 -0.0069785 -0.011473 -0.018353 -0.029721 0.0023581 -0.030923 -0.030813 -0.013126 -0.47955 -0.00069303 0.01447 0.013213 0.64836 0.59566 -0.094813 0.00069327 0.0019418 0.0094491 0.0016642 0.00027728 0.014609 0 0.0030522 0.60137 -0.014429 0.54136 0.87727 -0.021647 0.0058843 0.84652 0.12167 0.31354 0.0036844 -0.0056757 -0.0026322 0.0030522 0.67244 -0.34584 -0.00062099 0.85106 0.085365 -0.005814 -0.010232 0.016146 0.0066653 0.022304 0.19619 0.80092 -0.0080485 -0.00013862 -0.33179 0.69969 -0.00027724 0.0021546 -0.0054794 0 0.008892 -0.85368 0.020763 -0.0019399 0.98059 -0.4549 -0.8855 -0.0034627 0.83215 0.0077783 -0.18672 0 0.00041593 -0.00041585 0.6642 0.00027728 0.40261 -0.01106 0.35512 0.88016 0.20198 0.35692 0.0036076 0.8085 -0.0051078 0.0082198 0.62752 0.0019418 -0.0012473 -0.54854 0.48992 0.001803 0.0013868 -0.0096806 0.0087528 0.0058309 -0.012512 -0.010312 0 -0.36578 0.0060817 0.29024 0.75891 0.75427 0.0033299 0.0033299 -0.0070897 0.0021332 -0.001929 -0.0093195 0.0091705 -0.0091348 -0.0036011 0.00069327 -0.011198 0.8054 0.036512 0.2196 0 0.0095883 -0.0026322 -0.0088267 0.84061 0.003191 0 0.84632 -0.64271 0.061937 0.00027728 -0.0033484 0.63754 0.010146 -0.0094046 0.14073 -0.0047458 0.5941 0.86612 -0.0091286 0.76304 -0.0013057 0.057433 0.0027559 0.70307 -0.0045695 -0.0026322 0.0085259 0.004719 -0.0048812 -0.89517 0.0086135 0.75375 -0.0041546 0.92444 -0.0020784 0.43041 -0.0067813 0.78292 0.27505 -0.23885 -0.0089403 0 0.75471 -0.005261 0.0022193 0.0030522 0.0013868 -0.81843 0.010424 -0.0019399 Deletion Peak 6 - CN values 4q34.3 chr4:179280062-183067669(probes 463181:465119) chr4:181521852-182082855(probes 464327:464330) chr4:181525132-182958953(probes 464328:465029) 0.0001377 0.0001377 Actual Copy Change Given -0.006505 0.015479 -0.010784 -0.031632 -0.0034627 -0.0018014 0.008892 0.026373 -0.0048461 0.0048579 0 0.022725 -0.2939 0.013492 -0.0021177 -0.0071879 0.00458 -0.0084801 0.0046639 0.0093038 0.010285 0.0095883 0.027778 0.0070826 0.01465 -1.2929 -0.0063668 0.00069327 0.00083195 0.0051359 0.0052749 0.0012481 0.022725 0.0068044 -0.67894 0.0094491 0.014051 0 -0.42604 -0.00027724 -0.029994 0.0057867 -0.0062286 0.0041632 -0.55627 0 -0.0073339 0.0044411 0.0023581 0.010424 0.013353 0.0034687 0.012803 0.020203 0.012655 -0.80003 0.027357 0.0038854 0.0011093 0.0038854 -0.02151 0.0069435 0.00083195 -0.020293 -0.012844 -0.016017 -0.77891 0.006109 -0.00046209 -0.020412 -0.38873 -0.00041585 0.004719 0.0043021 -0.087456 -0.00069303 0.015998 -0.0045695 0.00050229 -0.0055291 -0.013953 -0.49896 0.0079175 -0.01729 -0.50768 0.0050583 0.020376 0.007118 0.017963 0.00055459 -0.018902 -0.0048461 0.0020805 -0.81351 0.018764 -0.15797 0.0034687 -0.0060904 0.0069435 0.58925 -0.011749 -0.015631 -0.039122 -0.019863 0 -0.0020784 0.010982 -0.091792 0.010424 -0.012713 0.96391 -0.0029091 0.0093231 -0.0094046 0.0016642 -0.80675 -0.002251 -0.0028124 -0.040752 -0.00097017 -0.0018014 -0.56206 0.0018892 -0.014503 -0.0040162 0.0026357 -0.025209 0.0084743 -0.0019124 -0.73845 0.020203 0.15397 -0.0050314 -0.27691 -0.019589 0 0.0029133 0.0063871 -0.0053899 -0.0044312 0.021463 0.0033299 -0.0071958 0.0024969 0.013911 -0.0012473 0 -0.026337 0 0.0030522 -0.031086 0.0080703 0.014888 -0.0008316 -0.0015243 0.01447 0.00055459 0.0097276 0.0022193 -0.00069303 -0.37042 -0.0024218 -0.012989 0.0020805 -0.0026322 0 0.046559 0.0069435 -0.72314 -0.67233 0.012934 -0.01439 -0.51404 0.20396 -0.01262 -0.0010576 0.013009 0.63598 -0.011473 -0.0067813 -0.84235 -0.006505 0.0024969 0.021603 0.56152 0.052668 0.0066653 -0.0047079 0.010424 -0.40219 -0.014916 0 0.0065262 0.0034687 0.011121 0 0.0013868 0.0011093 -0.011183 -0.34308 0.0013868 0.0013868 0 0.0022193 -0.18055 0.0066653 0.00458 -0.0081624 -0.56004 -0.0041546 0 0.005388 0.0081959 0.023005 0.00055459 -5.1977e-05 0.019363 -0.0027707 -0.35931 0.014302 -0.005261 0.00055459 0.0077385 0.011539 -0.00041585 0.01433 0.011679 0.010285 0.0093437 -0.00097017 -0.017535 0.0020805 0.0013868 -0.0016629 -0.0067739 -0.73249 -0.24448 0.00059352 -0.0031859 -0.80236 -0.042245 -0.005261 0.00041593 -0.0048461 0.0026357 -0.61717 0.021043 0.0033299 0.015283 -0.016704 0.057939 -0.0067813 -0.0026322 0.00083195 0.013213 0 0.66974 -0.85852 0.0034687 -0.91413 0.0024969 -0.0008316 0.018523 -0.0041546 -0.035881 0.64011 0.024688 -0.020371 0.008429 0.0093098 0.0020805 0.02168 0 0.019783 0.011958 -0.016704 -0.03504 -0.00408 0.52282 0.0037465 0.011818 0.0012481 0.0015255 0.011121 0.00071632 -0.013711 0.022444 -0.0048461 Deletion Peak 7 - CN values 5p15.33 chr5:1-31329532(probes 467523:485462) chr5:1314317-1350010(probes 467586:467594) chr5:1309468-1350010(probes 467584:467594) 0.09673 0.096799 Actual Copy Change Given 0.22931 -0.0038779 -0.15169 1.7446 -0.017116 0.0048579 -0.00013862 -0.85074 -0.0056699 0.0048579 0.004719 0.017824 0.014274 -0.80152 0.004719 -0.0026244 -0.00069303 0 0.0059149 -0.0013918 0 -0.030674 0.0080567 0.0012481 -0.017213 0.50116 0.00041593 0.00458 0.0084743 -0.037287 0.00013863 -0.0008316 -0.033928 0.0015255 0.013898 0.0052749 0.00027728 0.0091705 0.82118 -0.00027724 -0.014228 0.00069327 -0.032587 -0.40374 0.45479 0.0016642 0.001803 0.0016642 0.38982 -0.00039686 0 0.0013868 0.0077783 0 0.10994 0.72905 -0.018628 0.0030522 -0.0012473 -0.033307 0.87608 0.00013863 0 -0.016017 0.49939 -0.019934 0.81051 0.0016642 0.0034224 -0.010646 0.046417 -0.0049844 0.0019418 -0.0036011 0.46706 -0.0020784 -0.0051885 -0.019584 -0.0057279 0.1356 -0.010922 0.047212 -0.020039 0.32157 -0.00061892 -0.00021595 0.0072548 -0.0042929 0.0069435 0.006109 0.5231 -0.0036011 -0.011749 0.072684 -0.020451 -0.01849 -0.019943 0.015587 -0.013988 -0.015278 -0.0053992 -0.0093153 0.56205 -0.0038779 -0.0011087 -0.0040162 0 0.1069 0 0 0.93081 0 0.0045933 -0.0042665 0 0.015168 0.0070826 -0.9032 -0.76158 -0.0048073 -0.0051227 0.073833 -0.00060695 -0.0047079 -0.0095426 -0.0027609 0.10205 0.0037465 -0.00066555 -0.039258 1.549 0.15651 -0.00069303 -0.30275 0.034536 0.0019418 0.00041593 0.0033299 -0.0048461 -0.0019399 0 0.00027728 0.00066267 -0.015741 0.0072217 0.0063871 0.00083195 0.043723 0 0 0.0022193 0.017558 -0.01354 0.011958 0.3198 0.00055459 -0.0008316 0 -0.00041585 0.0049969 0.3473 -0.0003438 -0.016567 0 -0.0016243 0.0012562 0.98155 0 -0.13406 0.22715 0.0095229 -0.0041787 -0.0024938 0.11213 -0.0041546 0.0020805 -0.5821 -0.0090706 -0.0017399 0.00083195 0.0063871 0.015587 0 -0.00027724 0.58811 0.095363 -0.00097017 -0.0053992 -0.37853 0.59476 -0.0018014 0.37117 0.0081959 -0.0041546 -0.0026322 -0.0029091 -0.0076158 0.27111 -1.0029 1.5362 0 0.001803 0.0013868 0.0012481 0.41362 -0.0023553 0.00013863 -0.0029091 1.1227 -0.0022168 0.003191 0 0.027778 0 -0.0015243 -0.02362 0.006109 -0.0027707 0.016705 -0.013092 0.29167 -0.0008316 -0.0064064 0 -0.0011087 0.0030522 0.0044411 0.0016642 0.0076392 -0.00041585 -0.011342 0.0020805 0.004719 -0.13342 -0.0042855 0.027497 -0.24606 0.6148 0.00013863 -0.012851 0.90553 -0.0032862 -0.0027707 0.00083195 -0.0083005 0.15144 0 -0.015847 -0.0034868 -0.0023553 0.0065262 0 -0.00041585 0 0.00055459 0.86811 0.030451 -0.016841 0 0.071169 -0.0044423 -0.00027724 0.00458 0.00027728 0.01187 -0.01425 0.0069425 0 -0.00069303 -0.013815 0.0022193 0 -0.0024938 0 0.0037465 -0.0088526 -0.023896 0.065845 -0.0072835 -0.059788 0.004719 -0.020275 -0.0029091 0.0041632 0.00055459 -0.0049844 0.0011093 0.00069327 Deletion Peak 8 - CN values 5q35.2 chr5:93063923-180915260(probes 516867:567562) chr5:175081630-175113556(probes 565409:565419) chr5:175102973-175112682(probes 565415:565416) 0.11554 0.12162 Actual Copy Change Given 0.23241 -0.0038779 -0.019452 -0.020824 -0.017116 -0.010922 -0.00013862 -0.0022168 0.0054139 0.0048579 0.00041593 0.017824 0.025531 0.010006 0.49735 -0.0026244 -0.0037395 0 0.0059149 -0.0047138 0 0.41031 -0.0025408 0.0012481 0 0.50116 0.00041593 -0.0013858 0.0084743 0.0055529 -0.00027724 -0.0008316 -0.00069303 0.0015255 0.68533 -0.0051227 0.00027728 0.0091705 0.20656 -0.00027724 -0.014228 0.00069327 0.021284 -0.40374 -0.47818 0 0.001803 0.0016642 0.0043021 0.0027745 0 0.0013868 0.0077783 0 0.0020805 0.7317 -0.017936 -0.026714 -0.0012473 0.0033299 0.77964 -0.014641 0 -0.016017 0.49939 -0.019934 0.82373 -0.028628 -0.0077359 -0.0038779 0.047552 -0.0049844 -0.0018014 -0.0070576 3.1014 -0.0020784 -0.0051885 -0.020647 -0.0082145 0.31108 -0.010922 -0.49218 -0.0034627 0.32157 -0.00061892 -0.00021595 -0.012977 -0.00013862 -0.011749 0.006109 0.50759 -0.0036011 -0.011749 0.048404 -0.014385 -0.98632 -0.012713 -0.010094 -0.0096349 -0.018577 -0.011398 -0.0093153 0.56205 -0.018824 -0.0011087 -0.0040162 -0.017529 0.008918 0 0 0.97317 0 -0.0091069 -0.0036011 -0.0083005 0.011818 0.0071597 0.019643 -0.75729 0.00054397 -0.013465 0.05281 0.0028607 -0.0047079 -0.0095426 -0.0029429 1.1643 0.00071875 0.014078 0.57755 1.5203 0.78678 -0.0089515 -0.2869 0.0416 -0.0012473 -0.017803 0.0015699 0.00069327 -0.0019399 0 0.00027728 0.00066267 -0.0076101 0.0072217 -0.0048461 0.00083195 0.063795 0 0 -0.016567 0.017558 -0.01354 -0.0045695 0.3198 0.0049969 -0.01857 0 -0.00041585 -0.0051227 -0.33295 -0.0028371 -0.016567 0 -0.00041585 -0.0053332 0.99089 0 -0.75098 0.18495 -0.0082872 -0.016127 0.49666 0.11213 -0.0041546 -0.00025009 0.0016766 -0.0090706 0.0033299 0.00083195 0.0063871 0.016565 0 -0.066857 0.58453 -0.01904 -0.00097017 -0.0053992 0.0072217 -0.5009 -0.0018014 0.37858 -0.0044312 -0.0041546 -0.010706 -0.0029091 -0.0020784 0.27111 -0.0098042 -0.32878 0 0.001803 -0.0092666 0.0012481 0.41362 -0.0023553 0.00013863 0.78176 0.4049 -0.0022168 0.0016642 0 -0.0059522 0 -0.0015243 0.0065262 0.006109 -0.0031859 0.016705 -0.014063 0.29167 -0.0073803 -0.0064064 0 -0.0011087 0.0030522 0.0044411 -0.010293 -0.027945 -0.00041585 -0.0065112 0.0020805 0.004719 0.19299 -0.0042855 0 -0.24606 0.49009 0.00013863 0.0044411 0.0015255 -0.0065798 -0.0027707 0.00083195 -0.0083005 0.10497 -0.034631 -0.01354 -0.0034868 -0.0066432 -0.07921 0 -0.00041585 0 0.00055459 0.88686 -0.012411 -0.016841 -0.012248 0.071169 -0.0060904 -0.0070576 0.00458 0.00027728 -0.015828 -0.01335 0.0069425 0.032465 -0.006505 -0.054151 0.0022193 -0.018219 -0.0012663 0 0.0037465 -0.0088526 -0.023896 0.065845 -0.0094923 0.0023581 -0.0096849 -0.017529 -0.00013862 -0.0062286 -0.0043651 -0.0049844 0.0011093 0.00069327 Deletion Peak 9 - CN values 6p12.3 chr6:44235214-70508162(probes 593517:605635) chr6:49975265-50024298(probes 596819:596838) chr6:49965044-50279483(probes 596814:597003) 0.11427 0.12162 Actual Copy Change Given -0.03245 0 -0.014366 -0.016567 -0.013677 -0.0076101 -0.00069303 -0.84275 0 -0.010922 -0.0024938 -0.57397 -0.41748 0.00070246 0 -0.0091208 -0.0013858 -0.00041585 -0.067109 -0.00036333 0.0029133 0 0.0054139 0 -0.0030069 0.37495 0.00083195 -0.80418 0.00069327 0.0082427 0.00069327 -0.0085766 -0.0023553 0 0.017124 0.0056919 -0.013579 0.0029133 -0.12395 -0.0049844 -0.015466 -0.0042305 -0.83915 -0.42887 -0.0044017 0.0019418 -0.014405 -0.012622 0.003191 -0.00069303 0.0077783 -0.0018928 0.0096406 0.0034687 -0.012903 -0.0043477 0 -0.00069303 0.0024969 -0.0022168 -0.018353 0 -0.005261 -0.010784 -0.0070944 -0.023429 0.035665 -0.017529 -0.0080704 -0.012438 0.042166 -0.011749 -0.010166 -0.0054557 -0.039304 0.0030522 -0.019105 -0.013127 -0.02115 -0.010139 -0.017254 -0.14418 -0.00041585 -0.0055375 -0.0065795 -0.00021595 -0.0012143 0.00027728 0.003196 0.0029133 -0.016697 -0.0069195 -0.020412 -0.83519 0.0024581 0.0012481 -0.0049844 -0.015879 -0.013003 -0.014658 -0.0067813 -0.0012961 -0.037591 -0.019302 -0.0037395 -0.0060904 -0.0037395 -0.93162 -0.0008316 -0.015588 -0.014366 -0.016704 -0.013251 -0.0024938 0.022164 0.019503 0.0016642 -0.0020784 0.031155 -0.0016629 -0.0047079 -0.58206 0.0018892 0 -0.016372 -0.0018014 -0.020549 0.00083195 -0.0030303 -0.65929 -0.020961 -0.034768 0.49753 0.016286 0.018103 -0.00055444 -0.0027707 -0.74829 0 0 0.0076392 -0.0062286 0 -0.81811 0.0036076 -0.0063668 -0.0018014 -0.020687 -0.010508 0.0019418 0.76331 0 -0.0044312 -0.0066432 -0.0049844 0.0029133 -0.01106 -0.0057925 -0.0012473 -0.0056757 0.020763 -0.0061568 -0.017529 -0.0015243 -0.0029091 -0.0049844 -1.0252 -0.00097017 0.012516 -0.69061 -0.0059522 -0.014803 -0.0066432 -0.3471 -0.0080244 0.0013868 -0.59978 -0.013482 -0.00069303 -0.92518 0.0066996 -0.40421 -0.0053992 0 -0.46419 -0.017529 0 -0.010508 0.0030522 1.4444 0.0069435 -0.0040162 -0.0042929 -0.0071958 0.0048579 -0.0067239 0.0043021 -0.0047079 -0.015452 -0.76552 -0.00027724 -0.0024938 -0.0067813 -0.013264 -0.022681 -0.0083005 -0.0041546 -0.0031859 0.040468 -0.005814 -0.0038779 0.0016642 -0.01037 0.0062481 -0.005814 0.00041593 0 -0.0026322 0.0052749 0 -0.0057195 -0.013953 -0.01041 -0.0029091 -0.0062286 -0.0048077 0.0022193 0 0.0051819 0.0034687 -0.0054054 0.0011093 -0.0011087 -0.0034627 -0.012844 -0.80708 0.12064 -0.017391 -0.0022168 -0.0076101 -0.00055444 -0.00027724 0.0044411 -0.0011087 -0.0089906 3.0722 0.00083195 -0.0092691 0.00039183 -0.0077482 -0.90487 -0.0091286 0.0011093 -0.0035383 0 -0.012024 -0.006505 -0.046871 0 -0.9447 0 -0.0034627 -0.0069195 -0.0042929 -0.014679 -0.0040162 0.0087518 3.508 -0.0031859 -0.0073339 -0.014469 0.00021486 -0.0012473 0.001803 -0.010611 -0.013402 -0.038894 -0.0017574 -0.012801 0.0015255 0 -0.5794 0.001803 0.00027728 -0.0084385 0 -0.032314 0 Deletion Peak 10 - CN values 6q25.3 chr6:144604464-171115067(probes 648059:663565) chr6:157775888-158099316(probes 656673:656771) chr6:158040970-158042764(probes 656723:656724) 0.054498 0.053404 Actual Copy Change Given -0.03245 0 -0.0038779 -0.026851 -0.013677 -0.0076101 -0.00069303 -0.83527 0 0.0011093 -0.0049844 -0.57397 -0.41805 -0.50718 -0.0028304 -0.0092035 -0.0013858 -0.0063668 -0.067109 0.0066593 0.0029133 0 0.0054139 -0.0060168 0.013115 0.37495 0.00083195 -0.80418 0.00069327 -0.0048721 0.00069327 0.0022367 0.00055459 0 0.017124 0.0056919 0.010703 0.0029133 -0.41454 0.0027745 -0.015466 0.0040243 -0.83929 -0.42887 0.010285 0.0019418 0.003191 0.003191 0.0072217 -0.00069303 0.0077783 0.001803 0.0096406 0.0034687 -0.012903 -0.0043477 -0.0033243 -0.0016629 -0.0035368 -0.0022168 -0.020887 0 -0.0018014 -0.023268 -0.0070944 -0.023429 0.035665 -0.017529 -0.0080704 -0.012438 0.060651 -0.014319 -0.0081624 -0.0053571 0.40359 0.0030522 -0.019105 -0.017283 -0.027014 -0.010246 -0.022606 -0.16044 -0.00041585 -0.0055375 -0.0068496 -0.00021595 -0.0102 -0.0016051 0.019363 0.0029133 -0.021235 -0.0069195 -0.031905 -0.83519 -0.010527 0.0012481 -0.0049844 -0.016159 -0.0092195 -0.023926 -0.0067813 -0.0012961 -0.041074 -0.010784 -0.0037395 -0.0079032 -0.0037395 -0.46587 -0.0008316 -0.015588 0.0012481 0.0027745 -0.0022035 -0.0024938 -0.38616 0.01284 -0.010784 0.0023581 0.029466 -0.0037395 -0.0047079 -0.58206 0.0016117 -0.01106 -0.016372 -0.0018014 -0.030677 -0.39408 0.0059975 -0.68933 -0.020961 -0.034768 0.49753 0.012097 -0.012438 -0.0096555 -0.00041585 0.011958 0 0 0.0076392 -0.0024938 0 -0.81811 0.0036076 -0.0051227 -0.0018014 -0.0020784 -0.010508 0.0019418 0.75647 0.007792 0.004719 -0.0066432 -0.0053992 0.0029133 -0.01106 0.0013868 -0.0012473 -0.0056757 0.012934 0.002569 -0.017529 -0.0015243 -0.0029091 -0.0049844 -1.0256 -0.00097017 0.02539 -0.69061 -0.019177 -0.016701 -0.0066432 -0.35019 -0.0080244 0.0013868 -0.59103 -0.013482 -0.00069303 0.0063871 0.016705 -0.39664 -0.0053992 0 -0.46419 -0.0037395 0 -0.010508 0.0030522 -0.17018 0.00013863 -0.0040162 -0.0042929 -0.0071958 0.0048579 -0.00069303 0.0043021 -0.0047079 -0.015452 -0.77812 -0.00027724 -0.0024938 -0.0067813 0 -0.022681 -0.0083005 -0.0041546 -0.0047079 -0.59439 -0.0037395 -0.0038779 0.0016642 -0.01037 0.0062481 -0.005814 0.00041593 0 -0.0042929 -0.36691 0.012349 -0.0057195 -0.007472 -0.01041 -0.0029091 -0.0062286 0.0097276 0.0022193 0 0.0051819 0.0034687 -0.01561 4.2255e-05 -0.0011087 -0.0034627 -0.0079185 0.07815 0.11342 -0.21164 -0.0022168 -0.00027724 -0.00055444 -0.00096768 0.0030522 -0.0011087 -0.012408 -0.25007 -0.010646 0.0033299 0.00039183 -0.0077482 -0.90487 -0.0013858 0.0011093 0 0 -0.012024 -0.010784 -0.017666 0 -0.93115 0 -0.0034627 0.0086485 -0.0042929 -0.0094915 0.0024969 0.0087518 -0.91264 -0.00069303 -0.0073339 -0.0062286 0.00021486 -0.003453 0.001803 0.012376 -0.013402 -0.038894 -0.0016189 -0.012801 -0.0030475 0 -0.5794 0.001803 0.00027728 -0.00097017 0 0.019363 0 Deletion Peak 11 - CN values 9p21.3 chr9:21626574-22448737(probes 838931:839405) chr9:21959052-21997722(probes 839093:839106) chr9:20870619-26474475(probes 838367:841753) 2.2596e-17 2.2596e-17 Actual Copy Change Given -0.0059509 -0.014498 0.0041632 0.0012481 -0.0011087 0.00458 0.0035255 0.00027728 -0.0062894 0 0.00097064 -0.56621 -0.38022 -0.51166 0.0037465 0.00028513 0.0071325 -0.00050776 -0.019094 -0.0041605 -0.0063668 -0.0015243 -0.015466 -0.010784 -0.012811 -0.57822 -0.0030475 -0.029721 -0.0038779 0.0013868 0 -0.0016629 0 -0.0048461 0.015587 0 -0.0088526 0.0036076 -0.43116 0.00097064 0.010842 -0.0077482 0.0049969 -0.4256 -1.155 -0.0020784 0.0031677 -0.013953 -0.0015243 0 -0.010784 0.0018673 -0.0013858 -0.015741 0 -0.0020784 -0.026851 -0.0096806 -0.0018014 -0.006505 -0.0056757 -0.015191 -0.0027707 -0.0041546 -0.0003141 0.0012481 -1.2929 0.00097064 0.0017567 0.0072217 -1.1145 0 -0.0063337 -0.34824 -1.2929 0.0037465 -0.0076758 0.00053833 0.02127 0.0072757 0.0056148 -1.2929 -0.025893 0.00013863 0.0082703 0.0061705 -0.010889 -0.0037395 -0.005261 0.0016642 0.00069327 0.0037992 0 -0.82643 -0.012063 0.67976 -0.0071958 -0.097627 0.0080567 -0.010458 0.0041335 -0.69046 -0.025483 -0.0040162 -0.0062286 0.00069327 -0.027398 -0.01131 -0.0083005 0.027076 -0.019314 -0.62014 0.0089054 0.0049969 -0.0026322 0.0011093 -1.1308 0.0027745 -0.73705 -0.0045695 -0.0016629 0.061508 -0.0058663 -0.0019399 0.0033299 -0.0051227 -0.064777 -0.3885 -0.14962 -0.00027724 -0.040427 -0.016292 0.0066653 -0.025209 0.0093563 0.0087528 -0.0015243 -0.13781 -0.00055444 0.0019418 -0.022606 -0.0062286 0.015866 -1.2929 0.10395 0.00013863 -0.0034627 -0.012162 -0.0062286 -0.011749 -0.014275 -0.009805 0.0058309 0.0022193 -0.0056757 -0.0055375 0.015401 -0.0023553 0.0038854 -0.0034627 -1.2929 0.0011814 0 -0.0008316 0.0011093 -0.0011087 -0.018353 0.003191 0.027076 -0.69242 0.00041593 -0.009733 -0.0064433 -0.32797 0.00097064 -0.0015243 -0.57244 0.0028329 -0.41685 0.0056919 -1.2929 0.030286 0.0013868 -0.030404 -0.46078 -0.85162 -0.0011087 0.0036076 0.0066653 -0.51784 0.0077783 -0.0041546 0 -0.00041585 -0.0044312 0.0012481 0.0058309 -0.00069303 0.0060422 -1.2929 -0.0089906 0.00027728 0.00055459 -0.0019399 0.013911 0.0019418 0 -0.0003979 -1.2929 -0.0038779 0.0075 -0.005814 0.004719 -0.011749 0.0013868 -0.016429 -0.016429 0.022024 -0.37493 -1.2929 0 -0.006505 0.0012083 -0.0042929 0.0052749 -0.013677 -0.0087146 -0.0070576 -0.015741 -0.0034617 0.0067982 -0.0044312 0 -0.007472 0.0031985 0.034395 -0.25092 -0.015191 0.0029133 -0.0073339 -0.90783 -0.00013862 -0.0029091 0.020483 0 -0.074519 -0.028765 -0.0036011 -0.01315 -0.69776 -0.032587 -0.027535 -0.0016629 0.0062481 -0.0080244 -0.088061 -0.0043857 -0.027945 -0.0047079 -0.93619 0.0043471 0.0019418 -0.007472 0.0022193 0.018575 -0.0045695 -0.019315 -0.88742 0.0077156 0.0022193 0.0012481 -0.0020022 0.0016642 -0.012989 -0.0077482 0.0020805 -0.0082308 0.0062341 0.0018536 -0.005261 -0.010232 -0.56505 -0.010279 -0.0067813 0.0087528 -0.0022168 -0.016979 0.0095883 Deletion Peak 12 - CN values 10q21.1 chr10:49889860-69836432(probes 921883:933059) chr10:58354926-58362342(probes 926115:926116) chr10:58326466-58488383(probes 926099:926166) 0.1975 0.20764 Actual Copy Change Given -0.016567 -0.022469 0 -0.0059522 0 -0.0080244 -0.0077482 -0.84219 0 -0.0048461 -0.0038779 0.017683 0.030873 0 -0.0030727 0.0026436 -0.0070576 0.00041593 -0.064427 -0.0033303 -0.015879 -0.0094046 -0.01849 -0.019863 -0.015839 0.018943 0.0033299 -0.79193 -0.002112 -0.0041546 -0.0081624 -0.0053992 -0.023703 -0.0099565 0 -0.0069195 -0.014778 0.0016642 0.24981 -0.00069303 0 -0.011473 -0.83801 0.006109 0.0094491 -0.0070576 0.00027728 -0.019046 -0.006505 -0.0071958 -0.0073339 -0.0038779 -0.0012473 -0.022469 -0.005814 0.71848 -0.028218 -0.012024 0.0027745 -0.011198 -0.014366 -0.032723 -0.0098185 -0.024524 -0.0055743 -0.0069195 0.0024969 -0.015741 0.010378 0.0069435 -0.52971 -0.0098185 -0.014503 -0.047395 -0.021519 -0.0028497 0.78187 -0.021235 -0.012076 -0.0034365 0 -1.2929 -0.020412 -0.0051347 0 -0.0053381 -0.011657 -0.0027707 -0.0098724 -0.00027724 -0.0038779 0.004719 -0.01953 0.048404 -0.029622 -0.023155 -0.0056757 -0.0053745 -0.012318 -0.011934 -0.012024 0.0045311 -0.036287 0.8572 -0.012989 -0.011335 -0.031223 -0.91189 -0.012024 0.019533 -0.03054 0.0024969 -0.0066299 0.0011093 -0.0067813 -0.82976 0.016031 -0.0048461 -0.0069497 -0.0069195 -0.0123 -0.59051 -0.0053134 -0.0022168 0.008892 -0.0085766 -0.043331 -0.0076101 0 -0.011133 -0.050586 -0.094064 0.058829 0 0.0034687 -0.0083005 -0.0094046 0.0054139 -0.0053992 -0.0015243 -0.025483 -0.0049844 0.0093098 0 -0.0098185 -0.0088526 -0.0089906 -0.005814 -0.019177 -0.0055375 -0.021447 -0.017653 -0.012438 -0.0040162 -0.0027707 -0.0055375 -0.0041546 -0.011611 -0.0033243 -0.0060904 -0.26793 -0.004636 -0.011611 -0.0099565 -0.0023553 -0.0044312 -0.00040925 -0.0069195 0.017264 0.19046 -0.0041546 0.67953 0.00027728 -0.33456 -0.0065572 -0.0037395 -0.013604 -0.0052028 0.0040536 -0.0024153 -0.81351 -0.38145 -0.0048461 -0.030131 -0.45864 0.012097 -0.0040162 -0.0099565 -0.0018014 -0.37786 -0.0069747 -0.0040162 -0.0099565 -0.0096806 -0.016567 -0.010784 -0.0043525 -0.014162 -0.01201 -0.33283 -0.0049844 -0.005814 -0.0085766 -0.0076101 0.013353 -0.012258 -0.0044312 -0.0036916 0 -0.0049844 -0.011 -0.0099565 -0.0024938 -0.027135 -0.0081624 -0.017312 -0.01904 0.018523 -0.31221 0.0081685 -0.0008316 -0.013745 -0.0064064 -0.011473 -0.0029091 -0.018353 -0.0099565 -0.014906 -0.0094046 -0.00405 -0.0025 -0.0033243 -0.0031859 -1.019 -0.015459 0.0013868 -0.0012473 -0.017391 -8.1957e-05 -0.016429 -0.039519 -0.0066432 -0.97637 0.0036076 -0.0067813 -0.3326 -0.022058 -0.0060904 -0.013701 -0.0026322 -0.021784 0.00079339 -0.0056757 0.0052749 -0.010922 -0.0048273 -0.006505 0.70907 -0.0049844 0.045631 -0.0085766 -0.0036011 -0.015604 -0.005261 0.00758 -0.0049844 -0.027536 0.0084197 -0.0038779 -0.016386 -0.010094 -0.026502 -0.0055375 -0.039258 -0.016567 -0.025759 -0.017391 -0.00037188 -0.0014738 -0.0062286 -0.0123 -0.0033243 -0.013593 -0.012438 -0.013278 -0.0031859 -0.022881 0.004719 Deletion Peak 13 - CN values 11q22.3 chr11:98886288-117696649(probes 1027293:1039415) chr11:108529918-108815439(probes 1033186:1033333) chr11:86150866-135006516(probes 1019667:1050671) 1.0855e-06 0.00046508 Actual Copy Change Given -0.0047079 -0.01409 -0.0034627 0.0020805 -0.0098754 -0.00013862 -0.91364 -0.0019399 0.00069327 0.0030522 -0.39842 -0.58318 -0.42003 -0.00050326 0.0016642 0.0009785 -0.005261 -0.00069303 0.0045674 0.0095824 -0.012989 -0.0055004 -0.0047079 -0.018628 -0.016664 -0.59575 -0.00069303 -0.00013862 0.0015853 0 -0.00027724 0.0016642 -0.019264 -0.0020784 -0.047801 -0.0084385 -0.0098185 0.010703 -0.44134 0.00013863 -0.0028248 -0.0029091 0.0085615 0.0041632 0.015168 -0.0020784 0.0036076 -0.0092666 0 -0.0089906 -0.010454 0.0011093 0.0034687 -0.009987 0.001803 -0.023429 -0.020961 -0.00041585 -0.0008316 0.00069327 -0.0059522 -0.026441 -0.0020784 -0.012024 -0.0003141 -0.012989 0.8087 -0.014778 -0.0030937 0.0056919 -1.1218 -0.020824 -0.0019399 -0.3487 -0.04334 0.0015255 -0.0082281 -0.016841 -0.0028229 -0.001431 -0.0019399 0.17205 -0.017529 -0.0084385 -0.50634 0 -0.017359 0.00069327 -0.017254 0.0019418 -0.0033243 -0.005814 -0.015191 0.057511 -0.013165 -0.59136 -0.0037395 0.00083195 -0.00069303 0.010057 0.00041593 0.0034198 0.57755 -0.0085224 0.0022193 0 -0.023292 -0.91395 -0.0091286 0.017208 -0.03817 0.0019418 -0.0051473 0.0016642 0.0017294 -0.4612 -0.67985 0.00597 0.027357 -0.0092249 0.0048579 -0.59424 -0.0037919 0.0040243 0.0093098 0.00069327 -0.029175 -0.0019399 -0.15052 -0.66818 -0.039801 0.1598 -0.0013858 0.0069435 -0.86994 -0.0027707 -0.0013858 -0.0051536 0.00027728 0.00097064 -0.015329 0.00027728 0.010982 -0.0066432 -0.0053992 -0.0051227 -0.0013858 -0.0022168 -0.0054801 -0.0033243 -0.02603 -0.009805 0 -0.00069303 0.00083195 -0.0078863 -0.0008316 -0.0099565 0 0.0023581 0 -0.0067095 -0.010646 -0.0030475 0.00027728 -0.00067863 -0.018765 -0.0020784 0.011958 0.18147 -0.0048461 -0.013258 -0.49694 -0.33756 -0.0030475 0.0023581 -0.57964 -0.00035755 0.0044411 0 -0.037762 -0.38508 -0.0041546 -0.017529 0.56644 -0.86042 -0.0055375 -0.00027724 -0.0027707 0.41073 0.0055529 -0.0040162 -0.0048461 -0.0023553 -0.011749 -0.011611 -0.00013862 -0.0096806 0 -0.83276 -0.0016629 -0.0041546 -0.0098185 -0.0024938 0.013492 -0.00097017 -0.0077198 0.00055459 -0.41586 0 -0.00013862 -0.0022168 -0.0050905 -0.016017 -0.0051968 0.004719 -0.0099565 -0.0062286 -0.37842 -0.0041818 -0.0034627 -0.0083005 -0.0077878 -0.0097601 -0.0015243 -0.0087146 -0.0037395 -0.012162 -0.013677 0.0049367 0.007633 0.00055459 -0.0020784 0.00597 0.0045875 -0.087977 0.11682 0.48389 0.0016642 -0.0083005 -0.066143 0.0048579 -0.0008316 -0.48659 -0.0058421 0.10352 -0.022332 -0.0031859 -0.013013 -0.0038779 -0.0087146 -0.010859 -0.0012473 0.011121 -0.0076101 -0.011611 -0.0037395 -0.024388 -0.0040744 0.045631 -0.0022168 0.0026357 -0.013772 0 0.0074124 -0.0056757 -0.021785 -0.89723 -0.00027724 -0.83757 -0.00013862 -0.01484 -0.0031859 -0.0060904 -0.0088526 0 -0.02874 -0.0014081 5.0541e-05 -1.0062 -0.0063183 -0.27986 -0.0038779 -0.0019399 -0.0011087 0 -0.016979 -0.29059 Deletion Peak 14 - CN values 11q23.3 chr11:101318898-135006516(probes 1029200:1050671) chr11:119491787-119605479(probes 1040574:1040618) chr11:86150866-135006516(probes 1019667:1050671) 2.839e-05 0.0093742 Actual Copy Change Given -0.0047079 -0.01409 -0.0034627 0.0020805 -0.0098754 -0.00013862 -0.91364 -0.0019399 0.00069327 0.0030522 -0.39842 -0.58318 -0.42003 -0.00050326 0.0016642 0.0009785 -0.005261 -0.00069303 0.0045674 -0.02034 -0.012989 -0.0055004 -0.0047079 -0.018628 -0.016664 -0.59575 -0.00069303 -0.00013862 0.0015853 0 -0.00027724 0.0016642 -0.019264 -0.0020784 -0.047801 -0.0084385 -0.0098185 0.010703 -0.44134 0.0038854 -0.0028248 -0.0029091 0.0085615 0.0041632 0.015168 -0.0020784 0.0036076 -0.0092666 0 -0.0089906 -0.010454 0.0011093 0.0034687 -0.009987 0.001803 -0.023429 -0.020961 -0.00041585 -0.0008316 0.00069327 -0.0059522 -0.026441 -0.0020784 -0.012024 -0.0003141 -0.012989 0.74632 -0.014778 -0.0030937 0.0056919 -1.1218 -0.020824 -0.0019399 -0.3487 -0.04334 0.0015255 -0.0082281 -0.016841 -0.0028229 0.0087074 -0.0019399 -1.0529 -0.017529 -0.0084385 -0.50634 0 -0.017359 0.00069327 -0.017254 0.0019418 -0.0033243 -0.005814 -0.015191 0.057511 -0.013165 -0.59136 -0.0037395 0.00083195 -0.00069303 0.010057 0.00041593 0.0034198 0.57755 -0.0027707 0.0022193 0 -0.023292 -0.91395 -0.0091286 0.017208 -0.03817 0.0019418 0.0054272 0.0016642 0.0017294 -0.4612 -0.67985 0.00597 0.0075322 -0.0040162 0.0048579 -0.59424 -0.0037919 0.0040243 0.0093098 0.00069327 -0.029175 -0.0019399 -0.15052 -0.66818 -0.039801 0.1598 -0.0013858 0.0069435 -0.86994 -0.0027707 -0.0013858 -0.0051536 0.00027728 0.00097064 -0.015329 0.00027728 0.010982 -0.0066432 -0.0053992 -0.0051227 -0.0013858 -0.0022168 -0.0054801 -0.0033243 -0.02603 -0.009805 -0.0091286 -0.00069303 0.00083195 -0.0094642 -0.0008316 -0.0099565 0 0.0023581 0 -0.0067095 -0.010646 -0.0030475 0.00027728 -0.00067863 -0.018765 -0.0020784 0.011958 0.16777 -0.0048461 -0.013258 -0.49694 -0.33756 -0.0030475 0.0023581 -0.57964 -0.00035755 0.0044411 0 -0.037762 -0.38459 -0.0041546 -0.032263 0.56644 -0.89708 -0.0055375 -0.00027724 -0.0027707 0.41073 0.0055529 -0.0040162 -0.0048461 -0.0023553 -0.011749 -0.011611 -0.00013862 -0.0096806 0 -0.34274 -0.0016629 -0.0041546 -0.0098185 -0.0024938 0.013492 -0.00097017 -0.0077198 0.00055459 -0.41586 0 -0.00013862 -0.0022168 -0.0050905 -0.016017 -0.0051968 -0.014775 -0.0099565 -0.0062286 -0.37842 -0.0041818 -0.0034627 -0.0083005 -0.0077878 -0.0097601 -0.0015243 -0.0087146 -0.0037395 -0.012162 -0.013677 0.0049367 0.007633 0.00055459 -0.0020784 0.00597 0.0045875 -0.087977 0.11682 0.48389 0.0016642 -0.0083005 -0.066143 0.0048579 -0.00097017 0.0093098 -0.0058421 0.10789 -0.022332 -0.0031859 -0.013013 -0.0038779 -0.0087146 -0.010859 -0.0012473 0.011121 -0.0076101 -0.011611 -0.0037395 -0.024388 -0.0040744 0.0068678 -0.0022168 0.0026357 -0.013772 0 0.0074124 -0.0056757 -0.021785 -0.89432 -0.00027724 -0.014778 -0.00013862 -0.01484 -0.0031859 -0.0060904 -0.0088526 0 -0.02874 -0.0014081 5.0541e-05 -0.0048461 -0.0063183 -0.27986 -0.0038779 -0.0019399 -0.0011087 0 -0.016979 -0.29059 Deletion Peak 15 - CN values 14q11.2 chr14:20501369-21855250(probes 1180428:1181194) chr14:21618906-21625241(probes 1181073:1181080) chr14:20516395-21828988(probes 1180434:1181179) 0.0050848 0.0075781 Actual Copy Change Given -0.0033243 -0.0096806 -0.0018014 -0.010966 -0.054016 -0.0013858 -0.0008316 0.00041593 0.0012481 -0.0042929 0.00055459 -0.56992 0.41011 -0.00097017 -0.51197 -0.0055297 -0.0045695 0.0029133 -0.038632 0.011812 -0.0073339 -0.0030475 -0.028628 -0.0044312 -0.0031453 -0.043466 0.0012481 -0.0015243 -0.0031859 -0.0013858 -0.00027724 -0.0030475 -0.018765 -0.01904 -0.12486 -0.0048461 -0.01037 -0.76501 -0.81835 0.0013868 0.017124 -0.0098185 -0.008329 -0.42561 -0.010094 0.0015255 -0.6825 -0.014503 -0.38984 -0.0048461 -0.005814 0 -0.0040162 -0.022469 -0.67214 -0.79126 -0.018628 -0.0089906 0.0015255 0.0030522 0.0065262 -0.022058 -0.0024938 -0.0071958 -3.6865e-05 -0.015891 -0.006505 -0.027261 -0.038351 -0.0012473 -0.53855 -0.0040162 -0.0076101 -0.0034627 -0.52093 0.0041632 -0.0094703 0.0037465 -0.0035149 -0.32998 -0.51589 -0.44474 -0.013953 0.0016642 -0.51552 0.0053363 -0.011854 -0.0023553 0.0023581 -0.64874 -0.0012473 -0.0018014 -0.014228 -0.84155 -1.1685 0 -0.0063668 -0.0056757 -0.0019922 -0.01217 -0.0030475 -0.68171 -0.062898 -0.022195 -0.0016629 0.00055459 -0.011749 -0.093246 -0.017391 -0.55397 -0.022332 0.0037465 -0.0016496 0.0029133 -0.00013862 -0.82358 -0.046854 0.0051359 0.030169 0.33367 0.0041632 0.010898 0.0067517 -0.012438 -0.67793 0.0019418 0.038771 -0.38817 -0.14667 -0.088242 -0.019177 -0.081339 -0.0016629 -0.2714 -0.0013858 0.00055459 -0.0034627 -0.0013858 0.00027728 -0.00041585 -0.016017 -0.0047079 0.0091705 -0.005261 -0.011198 0 -0.0019399 -0.0067813 -0.012989 -0.91266 -0.013953 -0.0027571 -0.005261 0 -0.00027724 -0.0056757 -0.0014569 -0.010646 -0.0026322 -0.0019399 -0.37999 -0.38766 -0.0077482 -0.0067813 0.0012481 0.0019418 0 0.0033299 -0.73152 -0.7072 0.0037465 -0.014803 0.0070826 -0.33133 -0.0037395 0.0029133 -0.57521 -0.010312 -0.42189 0.0055529 -0.33733 -0.39035 -0.0047079 -0.024661 -0.46642 -0.86421 -0.0016629 0.0068044 0 0.44884 -0.85971 -0.0041546 -0.0030475 -0.015191 -0.029994 -0.0031859 -0.31949 -0.0040162 -0.0045552 -0.29804 -0.010232 -0.0077482 -0.0088526 -0.0123 -0.39786 -0.01354 -0.73486 0.003191 -0.55477 -0.0034627 0.00027728 -0.0045695 0.0058309 -0.0092666 0.003191 -0.011473 -0.011749 -0.013815 0.0052749 0.001637 -0.0031859 0.0068044 -0.0066828 -0.017803 0 -0.017666 -0.007472 -0.0062286 -0.86074 -0.00013862 0.013765 0.0012481 0.0036076 -0.0024938 -0.0031785 -0.050776 -0.24934 -0.014663 0.00041593 -0.0070576 0.02473 0 0.00069327 -0.48127 -0.0030475 0.16205 -0.019726 0.00041593 -0.0068053 -0.71568 -0.01409 0.0043021 -0.00055444 0.003191 -0.046312 -0.0027707 -0.0085766 -0.037122 -0.00041585 -0.96542 -0.0055375 0 -0.012438 -0.0094046 -0.50055 -0.0045695 -0.022607 0.018286 0.0098669 -0.015329 0 -0.020611 -0.0031859 -0.013815 -0.0044312 -0.0069195 -0.014916 -0.23027 0.00046648 -0.0066432 -0.0080244 0.012934 -0.0034627 -0.0085766 -0.0024938 0.0095883 -0.0020784 0.0043021 Deletion Peak 16 - CN values 14q24.2 chr14:1-107349540(probes 1180427:1229588) chr14:73695958-73745386(probes 1210011:1210047) chr14:73721246-73722028(probes 1210030:1210031) 0.085174 0.25777 Actual Copy Change Given -0.0038761 -0.015879 -0.0018014 0 -0.054016 -0.0013858 -0.012301 0.00041593 -0.0022168 -0.0042929 -0.0067992 -0.56992 -0.40981 -0.00097017 -0.51197 -0.00082375 -0.0045695 0.00030707 -0.044757 -0.0077541 -0.0073339 -0.0030475 -0.028628 -0.020687 -0.013762 -0.025893 0.0012481 0.016985 -0.0031859 -0.0024178 -0.00027724 -0.0030475 -0.018765 -0.01904 -0.12486 -0.0048461 -0.01037 -0.76501 -0.42287 0.0013868 0.00013863 -0.011611 0.016286 -0.42331 -0.43789 0.0015255 -0.6825 -0.017116 0.00013863 -0.0048461 -0.005814 0 -0.0040162 -0.04227 -0.65789 -0.79126 -0.029614 -0.0089906 0.0015255 -0.0024476 -0.0067813 -0.022058 -0.0024938 -0.0071958 0.005933 0.00082006 -0.006505 -0.010016 -0.055182 -0.0012473 -0.53855 -0.0040162 -0.0076101 -0.0066432 -0.51676 0.0041632 -0.0094703 -0.011878 -0.012099 -0.32998 -0.51589 -0.44474 -0.013953 0.0016642 -0.51552 -0.0036783 -0.011854 -0.0023553 -0.0049844 -0.64874 -0.0012473 -0.0018014 -0.014228 -0.84155 -0.01578 0 -0.0063668 -0.0056757 0.00069327 -0.0088021 -0.010508 -0.68961 -0.043466 -0.021488 -0.0016629 -0.0008316 -0.03311 -0.093246 -0.017391 -0.55397 -0.022332 0.0037465 -0.0016496 0.0029133 0.00085476 -0.82358 -0.046854 0.0051359 0.030169 -0.46451 0.00015345 0.062223 0.0067517 -0.012438 -0.67793 0.0019418 0.038771 -0.38817 -0.14667 -0.088242 -0.05037 -0.081339 -0.0016629 -0.28395 0.018243 -0.0067106 -0.0034627 -0.0013858 0.00027728 -0.00041585 -0.016017 -0.0047079 0.021603 0.016565 -0.011198 0 -0.0019399 0.00597 -0.012989 0.00055459 -0.013953 -0.016372 -0.005261 0 -0.0038779 -0.0056757 -0.0080042 -0.010646 -0.0026322 -0.0019399 -0.37943 -0.38766 -0.0077482 -0.0067813 0.0012481 0.0019418 0 0.0033299 -0.73152 -0.7072 -0.011473 -0.014803 0.0041632 -0.33133 -0.0037395 0.0029133 -0.5822 0.00089028 -0.42189 0.0055529 -0.33733 -0.38067 -0.0047079 -0.024661 -0.46174 -1.181 -0.0016629 -0.0068848 0 0.44884 -0.85971 -0.0041546 -0.011226 -0.015191 -0.020084 -0.0031859 -0.32147 -0.0040162 -0.0045552 0.8693 -0.010232 -0.0077482 -0.0088526 -0.0123 -0.39786 -0.0031859 -0.73486 0.003191 -0.5434 -0.0034627 0.00027728 -0.0045695 0.0058309 -0.023062 -0.0030475 -0.011473 -0.011749 -0.0040162 0.0052749 -0.0032131 -0.0031859 -0.0063668 -0.0066828 -0.017803 0 -0.017666 -0.007472 -0.0062286 -0.86074 -0.0013863 0.0054076 -0.0045695 -0.0013858 -0.0024938 -0.0031785 -0.037354 -0.24934 -0.014663 0.00041593 -0.0070576 0.02473 0 0.00069327 -0.47754 -0.0030475 -0.6284 -0.019726 -0.010766 -0.0068053 -0.0023553 -0.01409 0.0043021 -0.00055444 0.003191 -0.048954 -0.0074364 -0.0085766 -0.037122 -0.00041585 -0.96874 -0.0055375 0 -0.012438 -0.0036011 -0.50055 -0.0038779 -0.022607 0.013256 -0.0018359 -0.015329 -0.0085514 -0.020611 -0.0031859 -0.013815 -0.025616 -0.0069195 -0.014916 -0.23027 0.00046648 -0.0066432 -0.0080244 0.012934 -0.0034627 -0.0085766 -0.0024938 0.0095883 -0.019076 0.0086135 Deletion Peak 17 - CN values 15q13.3 chr15:1-64450037(probes 1229589:1252464) chr15:31772435-32931903(probes 1232649:1232797) chr15:31851257-31856553(probes 1232724:1232725) 0.2062 0.20764 Actual Copy Change Given -0.0085766 -0.042924 -0.049559 0.016006 0.0024969 -0.00097017 -0.015604 -0.0099565 -0.0015243 -0.0080244 -0.0016629 -0.56286 -0.40495 -0.0053992 0.006109 0.0075079 -0.0016629 -0.006762 -0.022112 -0.0073398 -0.015054 -0.0076101 -0.037082 -0.026577 -0.025306 -0.56912 0.0030522 0.022164 -0.0045695 -0.0037395 -0.14052 -0.005814 -0.035176 -0.019726 -0.021098 -0.016154 -0.022744 0.0026357 -0.42985 0.014749 0.021603 -0.016017 0.020203 -0.43713 0.015587 -0.0040162 -0.66883 -0.026167 -0.0063668 -0.013402 -0.019589 0.00013863 -0.014778 -0.026714 0.0026357 0.019363 -0.041838 -0.015191 0.0019418 -0.011749 0.0019418 -0.044822 -0.0062286 0.0052749 0.0021824 -0.00087957 -0.016017 0.0027745 -0.0042007 0.012516 -0.51105 0.0038854 -0.011198 -0.015879 -0.46537 -0.0064884 -0.014569 -0.0030475 0.0049445 0.011494 0.016146 0.56234 -0.026577 -0.3253 0.46204 -0.0014631 -0.019419 -0.011335 -0.018216 0.0062481 0.017264 0.001803 -0.026167 -0.83454 -0.034124 -0.00055444 -0.013402 0.022585 0.003191 0.010336 0.0047347 0.033359 -0.034223 -0.01245 -0.0091286 -0.0037395 -0.048613 0.022356 -0.019898 -0.54915 -0.035585 0.010006 0.0066787 -0.78614 -0.010646 -0.0055375 -0.059942 0.0016261 -0.76287 -0.00041585 0.00027728 -0.59867 0.0012655 0.015168 0.03214 -0.012437 0 -0.0016629 -0.14333 0.0083351 -0.055813 0.161 -0.0063668 -0.2812 0.034536 -0.007472 -0.0012473 0.0030522 -0.0029091 0.0030522 -0.041702 -0.010967 0.038771 0.013074 -0.019929 0 -0.0060904 0.017404 -0.023018 -0.0056757 0 -0.023552 -0.021235 -0.0038779 0.0013868 -0.015054 0.0023581 -0.012851 -0.0094046 -0.0094046 -0.011749 -0.0010367 0.0034687 -0.0123 0.0037465 0.0019418 -0.030813 -0.0034627 -0.55567 -0.71176 -0.021317 -0.0027948 0.0034687 -0.32205 -0.00055444 -0.0034627 0.0028486 0.0086721 -0.41399 0.018943 0.019503 -0.36601 -0.0011087 -0.048207 -0.45715 -0.86861 -0.00013862 -0.87299 0.00097064 -0.44868 0.024268 -0.0077482 -0.0071958 -0.012024 -0.02384 -0.0013858 0.0029133 -0.0063668 -0.001787 -0.31038 -0.033132 -0.0092666 -0.00027724 -0.016841 -0.39308 -0.005814 -0.0029091 0.0069435 -1.097 -0.0012473 -0.0027707 -0.0088526 -0.0033243 -0.034631 0.00597 -0.026277 -0.026577 -0.0036011 -0.0033243 0.00011138 -0.0027303 -0.0070576 -0.0014255 -0.005261 0.0052749 -0.029293 -0.018078 -0.010784 -0.025072 -0.0030475 0.017538 0.0015255 0.0062481 -0.0042929 -0.006083 -0.071071 -0.24873 0.47598 0.0016642 -0.016292 0.031859 0 -0.015604 -0.46557 -0.0051227 0.12241 -0.037626 -0.0084385 -0.017827 0.0026357 -0.055903 0.013967 -0.0049844 0.0024969 -0.023703 0.0019418 -0.0073845 -0.043195 0.0016642 -0.94646 -0.0037395 -0.0013858 -0.029584 -0.0011087 0.036423 -0.010922 -0.1088 0.024871 0 -0.035312 -0.0078863 -0.033194 -0.0024938 -0.023566 -0.026167 0.0058309 -0.0045695 -0.0028598 -0.014591 -0.010232 -0.017666 -0.56097 -0.0027707 -0.022058 -0.00045803 0.022024 -0.038306 -0.27727 Deletion Peak 18 - CN values 16q24.2 chr16:76501610-90354753(probes 1305521:1314303) chr16:87115781-87352842(probes 1313595:1313782) chr16:78500946-90354753(probes 1307152:1314303) 0.0042101 0.0044257 Actual Copy Change Given 0.22099 0.67994 0.015727 0.94486 0.64249 0.83314 -0.023566 -0.013264 -0.00069303 -0.0071958 -0.00041585 0.0084743 -0.4034 0.68906 0.006109 0.013919 -0.014843 0.0054139 0.0018868 0.7806 0.79045 0.68031 0.67307 0.53432 -0.037994 0.12079 -0.0029091 -0.8065 -0.0015243 0.56619 0.7747 -0.028355 0.74385 0.70926 -0.043873 0.82314 0.58166 0.0070826 -0.067592 0.0054139 0.029044 0.56952 -0.0013858 0.37907 -0.5719 0.81513 0.65977 0.57202 0.31113 -0.023018 -0.041024 -0.00027724 -0.011198 0.53613 0.6491 0.11374 0.66734 0.75005 -0.0027707 0.80947 0.80092 0.78524 0.38998 0.74651 0.93625 0.78913 0.73246 1.0216 0.68025 0.029184 -1.116 -0.0033243 0.68143 0.48045 0.013064 0.0036076 0.78148 0.92006 -0.023069 0.004223 0.015727 0.018327 1.7035 0.33221 0.015243 0.66059 -0.049392 -0.0091286 -0.080156 0.0058309 0.019783 0.63025 -0.02151 0.061937 1.39 -0.005261 0.35937 0.75089 -0.0064813 0.57583 0.011818 0.038298 0.57547 0.82494 0.77214 0.57362 1.3907 0.91455 0.84869 0.095363 0.91582 0.013492 -0.0055242 -0.80558 0.76772 -0.013953 0.12771 0.029606 0.040468 0.279 0.60124 -0.35314 0.0020279 0.0063982 0.046417 0.58793 0.60986 -0.026577 0.01925 0.0023581 1.4349 -0.027021 -0.65566 0.039195 0.91946 0.6308 0.57987 0.0033299 -0.0013858 0.0063871 0.9017 -0.0056757 0.040468 0.012376 -0.035312 0.0043021 0.59512 0.039619 0.49035 -0.013815 0.012934 0.51905 0.81064 -0.0029091 0.31225 -0.022195 0.00055459 -0.029846 -0.014879 0.67493 0.0030522 -0.0057421 0.87388 0.40011 -0.0047079 0.0077783 0.88086 0.56739 0.032986 0.17437 0.76273 0.70004 -0.52072 0.54294 0.70776 -0.0080244 -0.5875 0.011459 0.026233 0.83157 0.034254 0.082188 -0.0008316 0.91339 0.59062 -0.87512 -0.014228 0.85581 -0.0041546 0.34567 0.81162 0.36297 -0.0099565 0.70438 0.75681 0.42385 -0.0024938 0.34258 0.90494 -0.33745 0.37528 -0.010094 0.80986 0.06494 0.032986 0.62424 0.67683 -0.87712 0.4844 0.48285 -0.037919 0.45037 0.017544 0.66586 -0.0062286 0.67307 0.81552 -0.014916 -0.013677 -0.0092938 0.30218 0.78593 0.76211 0.55521 0.0022193 0.77195 -0.018216 -0.027261 0.76331 -0.0031859 0.024542 -0.0067813 -0.0071958 0.95488 0.80307 0.65443 0.19725 0.50116 0.004221 0.66346 0.019363 0.839 0.96124 0.022164 0.83628 0 0.73758 -0.020138 0.68921 0.57737 0.71547 0.031859 0.70457 0.012934 0.58524 0.86811 0.71528 0.70645 -0.020687 0.020687 -0.0096806 0.70645 -0.057617 0.51594 0.079933 0.64433 0.65001 0.028946 -0.0062286 0.68868 0.77291 1.7307 0.71961 0.6997 0.73861 0.80267 0.39861 0.0096325 0.0051889 -0.017666 0.70551 0.010703 0.67011 0.56347 -0.027113 0.027811 0.76025 0.012655 Deletion Peak 19 - CN values 19p13.3 chr19:1171151-4230222(probes 1393582:1394348) chr19:3974966-4040592(probes 1394300:1394316) chr19:3957922-4040592(probes 1394298:1394316) 0.058467 0.058117 Actual Copy Change Given -0.012851 -0.054555 -0.0060904 -0.0016629 -0.011335 -0.039122 -0.091287 -0.030404 -0.0033243 -0.039529 -0.062629 -0.53845 0.031155 -0.040616 0.013074 -0.012568 -0.035176 0.0015255 -0.0021332 -0.064112 -0.063032 -0.065984 -0.089037 -0.075897 -0.06581 0.017684 -0.0022168 -1.0028 -0.017391 -0.024388 -0.028218 -0.032587 -0.093271 -0.044551 -0.056038 -0.045635 -0.063838 -0.052936 -0.51321 -0.0048461 -0.48924 -0.055769 0.033267 -0.41091 -0.059135 -0.0091286 0.039861 -0.05469 -0.011611 -0.085059 -0.082135 -0.025209 -0.039122 -0.083093 -0.016154 0.044999 -0.122 -0.035857 0.00013863 -0.049559 -0.015741 -0.11717 -0.028628 0.0068044 0.011223 -0.00069303 -0.099999 -0.043466 -0.028674 0.022865 -0.52133 -0.085855 -0.060748 -0.051046 -0.47121 0.0023581 -0.048001 0 -0.059185 0.0084289 0.022865 -0.076998 -0.026304 0.021744 -0.47749 -0.029661 -0.07598 -0.031496 -0.066252 0.0012481 0.0075 -0.0053992 -0.059807 0 -0.058634 -0.029753 -0.033677 -0.027398 -0.06652 -0.01225 -0.02384 -0.010832 -0.025072 -0.063633 -0.026167 -0.032178 -0.093535 -0.91345 -0.11282 -0.074945 -0.044009 -0.0036011 -0.027385 -0.0014251 -0.024114 -0.80675 0.015727 0.0036076 -0.06585 -0.0008316 -0.036861 -0.038034 0.0052222 0.022024 0.10074 -0.023977 -0.059673 -0.01849 0.010034 -0.64434 -0.14261 0.10833 -0.035448 -0.036129 0.051814 -0.030813 -0.018765 0.027357 0.0034687 0.012097 -0.088639 -0.018924 0.061365 0.052952 -0.04726 0.00055459 -0.025756 0.050392 -0.065045 -0.042664 -0.020275 -0.042237 -0.055499 -0.03749 -0.0030475 -0.059673 -0.099736 -0.055095 -0.03749 -0.034768 -0.011198 -0.014432 -0.014503 -0.039394 0.0095883 -0.045906 -0.01354 -0.034631 -0.010232 0.037757 -0.060883 0.013328 -0.0011087 -0.2978 0.00069327 -0.0042929 -0.020613 -0.045442 -0.0070576 0.068235 0.0094491 -0.3058 -0.083864 -0.081871 0.51107 -0.11561 -0.041024 -0.066922 -0.028765 0.27616 0.045849 -0.016825 -0.063166 -0.045219 -0.079077 -0.024935 -0.0019399 -0.021098 -0.043859 -0.056173 -0.030267 -0.048748 -0.065899 -0.093799 0.050392 -0.034904 -0.026167 0.015727 -0.12226 0.0051359 -0.031905 -0.052531 0.017404 -0.063032 -0.070804 -0.065447 -0.070804 -0.023703 -0.43061 -0.016731 0.0034687 -0.016979 -0.036032 -0.017116 -0.048883 -0.084793 -0.047801 -0.066922 -0.041295 0.00055459 0.058218 -0.0011087 -0.030267 0.0036029 -0.048065 -0.076145 -0.010922 0.0093098 0.012511 -0.038306 -0.093535 0.0083351 0.027778 0.03031 -0.016429 -0.59351 -0.080541 -0.047124 -0.048907 -0.042381 -0.085399 0.013632 -0.017941 -0.021098 -0.095648 -0.0012473 -0.0015243 -0.063658 -0.056038 -0.039332 -0.051991 -0.016841 -0.082269 -0.030131 -0.38913 -0.047801 -0.12927 0.011163 -0.045499 -0.069064 -0.04428 -0.083525 -0.059269 -0.066386 -0.062361 0.0086135 0 0.0081008 0.015638 -0.029994 -0.055095 0.013492 0 -0.062987 -0.034768 0.065513 -0.088109 0.0026357 Deletion Peak 20 - CN values 19q13.42 chr19:36730042-59128983(probes 1407954:1417118) chr19:55000922-55029446(probes 1415215:1415225) chr19:55013772-55029446(probes 1415218:1415225) 0.054726 0.053404 Actual Copy Change Given -0.018513 -0.056104 -0.0060904 0.014609 -0.011335 -0.039122 -0.062304 -0.024935 -0.004292 -0.043059 -0.03681 -0.53845 -0.40937 -0.040616 0.011679 -0.012568 -0.035176 0.0015255 -0.0021332 -0.056583 -0.063032 -0.041024 -0.089037 -0.061689 -0.06581 0.017684 -0.0022168 0.041034 -0.017391 -0.024388 -0.028218 -0.043873 -0.093271 -0.044551 -0.056038 -0.045635 -0.063838 -0.031086 -0.098814 -0.0048461 0.055373 -0.055769 0.043723 -0.41091 -0.059135 -0.0091286 0.039861 -0.05469 -0.005261 -0.060076 -0.052666 -0.025209 -0.039122 -0.061823 -0.016154 -0.7114 -0.122 -0.035857 0.00013863 -0.049559 -0.017254 -0.10641 -0.028628 0.0068044 0.013176 -0.00069303 -0.099999 -0.015172 -0.011563 0.024829 -0.52133 -0.043574 -0.060748 -0.037319 0.046158 0.0023581 -0.048001 0 -0.045415 0.0084289 0.022865 -0.076998 -0.026304 0.021744 -0.47749 -0.029661 -0.07598 -0.031496 -0.067993 0.0012481 0.0075 -0.0089182 -0.059807 0 -0.058634 -0.016567 -0.033677 -0.0071605 -0.030436 -0.01225 -0.02384 0.02492 -0.025072 -0.067818 -0.0095426 -0.032178 -0.093535 0.13897 -0.080266 -0.071472 -0.044009 -0.0036011 -0.027385 0.011679 -0.016567 -0.026167 0.012789 -0.0013858 -0.061286 0 -0.025756 -0.038034 0.0052222 0.0055529 -0.60041 -0.0088526 -0.059673 -0.01849 0.010034 -0.073743 -0.12473 0.10833 -0.035448 -0.027808 0.062508 -0.030813 -0.018765 -0.72375 0.0034687 0.012097 -0.088639 -0.016429 0.079591 0.051949 -0.070357 -0.0083005 -1.0675 0.050392 -0.065045 -0.026304 0.0014452 -0.034618 -0.05725 -0.03749 -0.0030475 -0.059673 -0.053569 -0.055095 -0.043173 -0.034768 0.040044 -0.014432 -0.0050473 -0.039394 0.01433 -0.030667 -0.01354 -0.034631 -0.67739 0.12461 -0.060883 0.013328 -0.0011087 -0.2978 0.00069327 -0.0042929 -0.020613 -0.0075053 0.0091705 0.068235 0.0094491 -0.3058 -0.048221 -0.081871 0.51107 -0.11561 -0.041024 -0.037218 -0.028765 0.29851 0.045849 -0.0098185 -0.063166 -0.031632 -0.079077 -0.024935 -0.0019399 -0.021098 -0.028032 -0.0031859 -0.030267 -0.048748 -0.027535 -0.049251 0.050392 -0.034904 -0.026167 0.015727 -0.46376 -0.0017118 -0.031905 -0.024661 0.017404 -0.063032 -0.029994 -0.062763 -0.070804 -0.023703 -0.032723 -0.016731 0.0034687 -0.016979 -0.036032 -0.017116 -0.048883 -0.084793 -0.047801 -0.066922 -0.041295 0.00055459 0.058218 -0.0011087 -0.030267 0.012934 -0.020817 -0.076545 -0.010922 -0.011887 0.018523 -0.035721 -0.01904 0.0083351 0.043582 0.03031 -0.016429 -0.61748 -0.075211 -0.047124 -0.048907 -0.042381 -0.082535 0.018383 -0.017941 -0.021098 -0.095648 0.0051359 -0.0015243 -0.060614 -0.041037 -0.039332 -0.051991 -0.016841 -0.082269 -0.030131 -0.42747 -0.047801 -0.097101 0.014791 -0.032587 -0.069064 -0.049154 -0.088699 -0.042652 -0.066386 -0.062361 0.0086135 0 0.0081008 0.015638 -0.029994 -0.055095 0.021323 0.00083195 -0.054286 -0.034768 0.065513 -0.088109 0.010146 Deletion Peak 21 - CN values 22q12.2 chr22:29969457-30128393(probes 1479312:1479377) chr22:29984760-30102685(probes 1479319:1479367) chr22:30048593-30057573(probes 1479342:1479349) 0.057928 0.058117 Actual Copy Change Given -0.017391 -0.060211 0.0084743 0.010842 -0.010508 -0.020412 -0.047531 -0.018353 -0.021921 -0.023292 -0.027808 -0.55025 -0.40738 -0.030677 0.00027728 0.006395 -0.016567 -0.017666 -0.056361 -0.037904 -0.048883 -0.03681 -0.083598 -0.056307 -0.063127 -0.58872 -0.096081 -0.78662 -0.019452 -0.0078863 -0.46759 -0.02603 -0.085988 -0.041974 -0.030267 -0.04983 -0.054016 -0.027671 0.25261 0.0036076 -0.53185 -0.048283 0.037782 -0.43691 -0.028765 -0.91063 0.03863 -0.058596 -0.016017 -0.044822 -0.056307 -0.0076101 -0.040073 -0.064911 -0.017116 -0.77575 -0.096836 -0.054016 -0.0019399 -0.057789 -0.0018014 -0.10335 -0.017254 -0.016704 -0.0087513 0.0090312 -0.068529 -0.013953 -0.013861 -0.98118 -0.50733 -0.014778 0.64066 -0.035857 -0.4764 -0.00069303 -0.038371 -0.015191 -0.039717 -0.011656 0.020763 -0.41715 -0.051451 0.012237 -0.52025 -0.027201 -0.057892 -0.12499 -0.062495 -0.059807 0.024408 0 -0.21293 -0.86649 -0.063607 -0.0020784 -0.030514 -0.00013862 -0.0092666 0.0096394 -0.0022168 0.046225 -0.058193 -0.059 -0.025072 -0.024661 -0.097495 -0.40427 -0.06142 -0.15643 -0.072007 0.0063871 -0.011046 -0.02571 -0.827 -0.036265 -0.65295 0.0022193 -0.20858 -0.081738 -0.029311 -0.014503 -0.0070737 -0.48071 -0.10893 -0.02067 -0.069466 -0.0060904 0.018831 -0.67021 -0.13096 0.13954 -0.018878 -0.29071 -0.87291 -0.025072 -0.029038 -0.053206 -0.0034627 -0.32286 -0.10118 -0.01409 -0.12317 -0.57546 -0.053611 0.006109 -0.024524 -0.72791 -0.073743 -0.035448 0.017684 -0.049005 -0.063032 -0.017529 -0.0016629 -0.042381 -0.02151 -0.055374 -0.03054 -0.038034 -0.76012 -0.0065713 0.0024969 -0.022606 0.0076392 -0.0081592 -1.0596 -0.031359 -1.2929 -0.74812 -0.059807 -1.2929 0.0080567 -0.2991 -0.0049844 -0.012438 -0.60472 0.005392 0.006109 -0.91965 -0.84691 -0.3217 -0.055666 0.84593 -0.46982 -0.049659 -0.036946 -0.027945 -0.031632 -0.35099 0.016845 -0.017803 -0.053746 -0.059404 -0.064777 -0.01849 -0.00069303 -0.017666 -0.97002 0.072253 -0.034086 -0.028218 -0.023977 -0.037626 -0.0037395 -0.017254 -0.0099281 0.0038854 -0.53926 -0.0011087 -0.017803 -0.034223 0.02511 -0.060748 -0.01904 -0.07067 -0.065581 -0.015054 -0.40429 -0.021125 0.0012481 -0.012989 -0.016193 -0.085722 -0.010784 -0.087844 -0.043331 -0.044822 -0.054825 -0.0034627 -0.7837 -0.012576 -0.015054 -0.092952 -0.022051 -0.10565 -0.15592 -0.29189 0.01433 -0.08559 0.09333 -0.0041546 -0.13432 0.04259 -0.017941 -0.63547 -0.085988 -0.034631 -0.044574 -0.022606 -0.13471 -0.71568 -0.016292 -0.0038779 -0.044162 -0.01052 -0.018948 -0.090626 -0.028218 -0.98256 -0.030404 -0.013127 -0.07214 -0.018216 -0.4589 -0.037082 -0.09195 -0.89585 -0.021373 -0.065447 -0.034768 -0.091347 -0.032587 -0.063838 -0.065045 0.010564 0.19041 0.010747 -0.14009 -0.029448 -0.049019 -0.56087 -0.010094 -0.052666 -0.014228 -0.78623 -0.08559 0.013911