Unique Name Descriptor Wide Peak Limits Peak Limits Region Limits q values Residual q values after removing segments shared with higher peaks Broad or Focal Amplitude Threshold TCGA-3B-A9HI-01A-11D-A386-01 TCGA-3B-A9HJ-01A-11D-A386-01 TCGA-3B-A9HL-01A-11D-A386-01 TCGA-3B-A9HO-01A-11D-A386-01 TCGA-3B-A9HP-01A-11D-A386-01 TCGA-3B-A9HQ-01A-11D-A386-01 TCGA-3B-A9HR-01A-11D-A386-01 TCGA-3B-A9HS-01A-11D-A38Y-01 TCGA-3B-A9HT-01A-11D-A38Y-01 TCGA-3B-A9HU-01A-11D-A38Y-01 TCGA-3B-A9HV-01A-11D-A38Y-01 TCGA-3B-A9HX-01A-11D-A38Y-01 TCGA-3B-A9HY-01A-11D-A38Y-01 TCGA-3B-A9HZ-01A-11D-A38Y-01 TCGA-3B-A9I0-01A-11D-A38Y-01 TCGA-3B-A9I1-01A-11D-A38Y-01 TCGA-3B-A9I3-01A-11D-A38Y-01 TCGA-3R-A8YX-01A-11D-A37B-01 TCGA-DX-A1KU-01A-32D-A24M-01 TCGA-DX-A1KW-01A-22D-A24M-01 TCGA-DX-A1KX-01A-22D-A24M-01 TCGA-DX-A1KY-01A-11D-A24M-01 TCGA-DX-A1KZ-01A-11D-A24M-01 TCGA-DX-A1L0-01A-11D-A24M-01 TCGA-DX-A1L1-01A-11D-A24M-01 TCGA-DX-A1L2-01A-22D-A24M-01 TCGA-DX-A1L3-01A-11D-A24M-01 TCGA-DX-A1L4-01A-12D-A26F-01 TCGA-DX-A23R-01A-11D-A26F-01 TCGA-DX-A23T-01A-11D-A26F-01 TCGA-DX-A23U-01A-11D-A26F-01 TCGA-DX-A23V-01A-11D-A29M-01 TCGA-DX-A23Y-01A-11D-A27O-01 TCGA-DX-A23Z-01A-11D-A27O-01 TCGA-DX-A240-01A-32D-A27O-01 TCGA-DX-A2IZ-01A-11D-A21P-01 TCGA-DX-A2J0-01A-11D-A21P-01 TCGA-DX-A2J1-01A-11D-A21P-01 TCGA-DX-A2J4-01A-32D-A21P-01 TCGA-DX-A3LS-01A-11D-A21P-01 TCGA-DX-A3LT-01A-12D-A21P-01 TCGA-DX-A3LU-01A-11D-A21P-01 TCGA-DX-A3LW-01A-21D-A21P-01 TCGA-DX-A3LY-01B-11D-A27O-01 TCGA-DX-A3M1-01A-11D-A227-01 TCGA-DX-A3M2-01A-21D-A227-01 TCGA-DX-A3U5-01A-11D-A227-01 TCGA-DX-A3U6-01A-11D-A29M-01 TCGA-DX-A3U7-01A-11D-A29M-01 TCGA-DX-A3U8-01A-11D-A29M-01 TCGA-DX-A3U9-01A-11D-A306-01 TCGA-DX-A3UA-01A-12D-A306-01 TCGA-DX-A3UB-01A-11D-A306-01 TCGA-DX-A3UC-01A-11D-A306-01 TCGA-DX-A3UD-01A-11D-A306-01 TCGA-DX-A3UE-01A-11D-A306-01 TCGA-DX-A3UF-01A-11D-A306-01 TCGA-DX-A48J-01A-21D-A306-01 TCGA-DX-A48K-01A-11D-A306-01 TCGA-DX-A48L-01A-11D-A306-01 TCGA-DX-A48N-01A-11D-A306-01 TCGA-DX-A48O-01A-11D-A306-01 TCGA-DX-A48P-01A-11D-A306-01 TCGA-DX-A48R-01A-11D-A306-01 TCGA-DX-A48U-01A-11D-A306-01 TCGA-DX-A48V-01A-11D-A306-01 TCGA-DX-A6B7-01A-11D-A306-01 TCGA-DX-A6B8-01A-11D-A306-01 TCGA-DX-A6B9-01A-12D-A32H-01 TCGA-DX-A6BA-01A-11D-A306-01 TCGA-DX-A6BB-01A-12D-A32H-01 TCGA-DX-A6BE-01A-41D-A32H-01 TCGA-DX-A6BF-01A-11D-A306-01 TCGA-DX-A6BG-01A-11D-A306-01 TCGA-DX-A6BH-01A-12D-A306-01 TCGA-DX-A6BK-01A-11D-A306-01 TCGA-DX-A6YQ-01A-12D-A33D-01 TCGA-DX-A6YR-01A-33D-A350-01 TCGA-DX-A6YS-01A-12D-A350-01 TCGA-DX-A6YT-01A-21D-A350-01 TCGA-DX-A6YU-01A-12D-A33D-01 TCGA-DX-A6YV-01A-12D-A350-01 TCGA-DX-A6YX-01A-11D-A416-01 TCGA-DX-A6YZ-01A-12D-A350-01 TCGA-DX-A6Z0-01A-13D-A36I-01 TCGA-DX-A6Z2-01A-12D-A40C-01 TCGA-DX-A7EF-01A-11D-A33D-01 TCGA-DX-A7EI-01A-11D-A33D-01 TCGA-DX-A7EL-01A-12D-A40C-01 TCGA-DX-A7EM-01A-11D-A36I-01 TCGA-DX-A7EN-01A-11D-A38Y-01 TCGA-DX-A7EO-01A-11D-A36I-01 TCGA-DX-A7EQ-01A-11D-A386-01 TCGA-DX-A7ER-01A-11D-A40C-01 TCGA-DX-A7ES-01A-31D-A38Y-01 TCGA-DX-A7ET-01A-11D-A36I-01 TCGA-DX-A8BG-01A-12D-A416-01 TCGA-DX-A8BH-01A-11D-A37B-01 TCGA-DX-A8BJ-01A-11D-A416-01 TCGA-DX-A8BK-01A-11D-A37B-01 TCGA-DX-A8BL-01A-11D-A416-01 TCGA-DX-A8BM-01A-11D-A416-01 TCGA-DX-A8BN-01A-11D-A37B-01 TCGA-DX-A8BO-01A-11D-A416-01 TCGA-DX-A8BP-01A-11D-A37B-01 TCGA-DX-A8BR-01A-11D-A416-01 TCGA-DX-A8BS-01A-11D-A37B-01 TCGA-DX-A8BT-01A-11D-A37B-01 TCGA-DX-A8BU-01A-11D-A37B-01 TCGA-DX-A8BV-01A-11D-A37B-01 TCGA-DX-A8BX-01A-11D-A37B-01 TCGA-DX-A8BZ-01A-11D-A37B-01 TCGA-DX-AATS-01A-12D-A416-01 TCGA-DX-AB2E-01A-11D-A38Y-01 TCGA-DX-AB2F-01A-11D-A386-01 TCGA-DX-AB2G-01A-11D-A38Y-01 TCGA-DX-AB2H-01A-11D-A38Y-01 TCGA-DX-AB2J-01A-11D-A386-01 TCGA-DX-AB2L-01A-32D-A416-01 TCGA-DX-AB2O-01A-12D-A38Y-01 TCGA-DX-AB2P-01A-11D-A386-01 TCGA-DX-AB2Q-01A-11D-A38Y-01 TCGA-DX-AB2S-01A-11D-A38Y-01 TCGA-DX-AB2T-01A-11D-A386-01 TCGA-DX-AB2V-01A-11D-A416-01 TCGA-DX-AB2W-01A-11D-A38Y-01 TCGA-DX-AB2X-01A-11D-A386-01 TCGA-DX-AB2Z-01A-11D-A386-01 TCGA-DX-AB30-01A-11D-A38Y-01 TCGA-DX-AB32-01A-11D-A416-01 TCGA-DX-AB35-01A-21D-A416-01 TCGA-DX-AB36-01A-11D-A416-01 TCGA-DX-AB37-01A-11D-A416-01 TCGA-DX-AB3A-01A-11D-A416-01 TCGA-DX-AB3B-01A-11D-A416-01 TCGA-DX-AB3C-01A-11D-A416-01 TCGA-FX-A2QS-01A-11D-A21P-01 TCGA-FX-A3NJ-01A-11D-A21P-01 TCGA-FX-A3NK-01A-11D-A21P-01 TCGA-FX-A3RE-01A-11D-A227-01 TCGA-FX-A3TO-01A-11D-A227-01 TCGA-FX-A48G-01A-11D-A24M-01 TCGA-FX-A76Y-01A-11D-A350-01 TCGA-FX-A8OO-01A-11D-A36I-01 TCGA-HB-A2OT-01A-11D-A21P-01 TCGA-HB-A3L4-01A-11D-A21P-01 TCGA-HB-A3YV-01A-11D-A24M-01 TCGA-HB-A43Z-01A-11D-A24M-01 TCGA-HB-A5W3-01A-11D-A29M-01 TCGA-HS-A5N7-01A-21D-A26F-01 TCGA-HS-A5N8-01A-11D-A26F-01 TCGA-HS-A5N9-01A-11D-A26F-01 TCGA-HS-A5NA-01A-11D-A26F-01 TCGA-IE-A3OV-01A-11D-A227-01 TCGA-IE-A4EH-01A-11D-A24M-01 TCGA-IE-A4EI-01A-11D-A24M-01 TCGA-IE-A4EJ-01A-11D-A24M-01 TCGA-IE-A4EK-01A-11D-A24M-01 TCGA-IE-A6BZ-01A-11D-A306-01 TCGA-IF-A3RQ-01A-11D-A227-01 TCGA-IF-A4AJ-01A-11D-A24M-01 TCGA-IF-A4AK-01A-21D-A24M-01 TCGA-IS-A3K6-01A-11D-A21P-01 TCGA-IS-A3K7-01A-11D-A21P-01 TCGA-IS-A3K8-01A-11D-A21P-01 TCGA-IS-A3KA-01A-11D-A21P-01 TCGA-IW-A3M4-01A-11D-A21P-01 TCGA-IW-A3M5-01A-22D-A21P-01 TCGA-IW-A3M6-01A-11D-A21P-01 TCGA-JV-A5VE-01A-11D-A29M-01 TCGA-JV-A5VF-01A-11D-A29M-01 TCGA-JV-A75J-01A-11D-A32H-01 TCGA-K1-A3PN-01A-11D-A227-01 TCGA-K1-A3PO-01A-11D-A21P-01 TCGA-K1-A42W-01A-11D-A24M-01 TCGA-K1-A42X-01A-11D-A24M-01 TCGA-K1-A6RT-01A-32D-A33D-01 TCGA-K1-A6RU-01A-11D-A32H-01 TCGA-K1-A6RV-01A-11D-A32H-01 TCGA-KD-A5QS-01A-11D-A27O-01 TCGA-KD-A5QT-01A-11D-A27O-01 TCGA-KD-A5QU-01A-11D-A27O-01 TCGA-KF-A41W-01A-11D-A24M-01 TCGA-LI-A67I-01A-31D-A306-01 TCGA-LI-A9QH-01A-11D-A37B-01 TCGA-MB-A5Y8-01A-11D-A29M-01 TCGA-MB-A5Y9-01A-11D-A29M-01 TCGA-MB-A5YA-01A-11D-A29M-01 TCGA-MB-A8JK-01A-11D-A36I-01 TCGA-MB-A8JL-01A-11D-A36I-01 TCGA-MJ-A68H-01A-11D-A306-01 TCGA-MJ-A68J-01A-11D-A306-01 TCGA-MJ-A850-01A-11D-A350-01 TCGA-MO-A47P-01A-11D-A24M-01 TCGA-MO-A47R-01A-11D-A24M-01 TCGA-N1-A6IA-01A-12D-A32H-01 TCGA-PC-A5DK-01A-11D-A27O-01 TCGA-PC-A5DL-01A-11D-A26F-01 TCGA-PC-A5DM-01A-11D-A27O-01 TCGA-PC-A5DN-01A-12D-A27O-01 TCGA-PC-A5DO-01A-11D-A26F-01 TCGA-PC-A5DP-01A-11D-A26F-01 TCGA-QC-A6FX-01A-11D-A32H-01 TCGA-QC-A7B5-01A-11D-A33D-01 TCGA-QC-AA9N-01A-11D-A38Y-01 TCGA-QQ-A5V2-01A-11D-A32H-01 TCGA-QQ-A5V9-01A-11D-A32H-01 TCGA-QQ-A5VA-01A-12D-A32H-01 TCGA-QQ-A5VB-01A-11D-A36I-01 TCGA-QQ-A5VC-01A-31D-A32H-01 TCGA-QQ-A5VD-01A-21D-A32H-01 TCGA-QQ-A8VB-01A-11D-A37B-01 TCGA-QQ-A8VD-01A-42D-A38Y-01 TCGA-QQ-A8VF-01A-11D-A37B-01 TCGA-QQ-A8VG-01A-11D-A37B-01 TCGA-QQ-A8VH-01A-11D-A37B-01 TCGA-RN-A68Q-01A-11D-A306-01 TCGA-RN-AAAQ-01A-21D-A38Y-01 TCGA-SG-A6Z4-01A-22D-A33D-01 TCGA-SG-A6Z7-01A-12D-A32H-01 TCGA-SG-A849-01A-11D-A350-01 TCGA-SI-A71O-01A-12D-A33D-01 TCGA-SI-A71P-01A-12D-A33D-01 TCGA-SI-A71Q-01A-12D-A33D-01 TCGA-SI-AA8B-01A-11D-A386-01 TCGA-SI-AA8C-01A-11D-A386-01 TCGA-UE-A6QT-01A-12D-A32H-01 TCGA-UE-A6QU-01A-12D-A32H-01 TCGA-VT-A80G-01A-11D-A36I-01 TCGA-VT-A80J-01A-11D-A36I-01 TCGA-VT-AB3D-01A-12D-A416-01 TCGA-WK-A8XO-01A-11D-A37B-01 TCGA-WK-A8XQ-01A-11D-A37B-01 TCGA-WK-A8XS-01A-11D-A37B-01 TCGA-WK-A8XT-01A-11D-A37B-01 TCGA-WK-A8XX-01A-11D-A37B-01 TCGA-WK-A8XY-01A-11D-A37B-01 TCGA-WK-A8Y0-01A-11D-A416-01 TCGA-WP-A9GB-01A-11D-A37B-01 TCGA-X2-A95T-01A-11D-A37B-01 TCGA-X6-A7W8-01A-21D-A350-01 TCGA-X6-A7WA-01A-12D-A350-01 TCGA-X6-A7WB-01A-11D-A350-01 TCGA-X6-A7WC-01A-12D-A350-01 TCGA-X6-A7WD-01A-21D-A350-01 TCGA-X6-A8C2-01A-11D-A36I-01 TCGA-X6-A8C3-01A-11D-A36I-01 TCGA-X6-A8C4-01A-11D-A36I-01 TCGA-X6-A8C5-01A-11D-A36I-01 TCGA-X6-A8C6-01A-11D-A36I-01 TCGA-X6-A8C7-01A-11D-A36I-01 TCGA-X9-A971-01A-11D-A386-01 TCGA-X9-A973-01A-11D-A386-01 TCGA-Z4-A8JB-01A-23D-A37B-01 TCGA-Z4-A9VC-01A-11D-A37B-01 TCGA-Z4-AAPF-01A-11D-A38Y-01 TCGA-Z4-AAPG-01A-11D-A38Y-01 Amplification Peak 1 1p32.1 chr1:58847071-59952427(probes 30063:30884) chr1:59233991-59252053(probes 30369:30380) chr1:57381136-61434117(probes 28853:31809) 3.4253e-12 3.4253e-12 0: t<0.1; 1: 0.10.9 0 0 2 0 0 0 0 1 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 2 0 0 0 0 0 1 2 2 2 0 0 2 1 0 0 0 1 2 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 1 2 2 2 2 0 0 1 0 0 0 1 1 1 0 0 0 2 0 0 0 0 0 0 0 0 1 1 0 1 1 1 0 0 1 1 0 1 0 1 1 0 1 1 1 0 0 0 0 0 2 1 0 0 1 0 1 2 1 0 0 0 2 0 2 0 0 1 0 0 0 1 0 0 0 1 0 2 1 0 0 0 1 2 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 1 1 1 1 0 1 1 2 1 1 0 0 1 0 0 0 0 0 0 2 0 0 1 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 1 1 1 1 0 2 0 0 0 1 1 0 2 0 0 0 1 0 1 0 0 1 0 0 2 0 0 0 2 0 1 0 0 0 0 0 0 1 Amplification Peak 2 1q21.3 chr1:149881399-154019796(probes 67523:69421) chr1:153106296-153134086(probes 68986:69001) chr1:120527362-176736461(probes 67522:83775) 4.3422e-08 0.033553 0: t<0.1; 1: 0.10.9 1 0 1 2 1 0 0 1 0 0 0 1 0 0 0 1 1 1 0 0 0 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 2 2 0 1 1 0 0 2 0 1 0 1 0 2 2 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 2 1 1 2 1 0 0 0 0 2 0 0 0 0 0 0 0 0 1 0 2 1 2 0 0 1 0 1 2 0 1 1 0 0 1 0 0 0 0 0 0 1 0 1 0 0 1 1 2 1 0 0 1 0 1 2 0 0 1 0 0 0 1 1 0 2 1 0 0 1 0 1 1 2 1 1 1 1 0 0 1 0 1 0 1 1 0 0 0 1 1 2 1 0 0 0 1 1 0 1 1 1 1 1 1 2 1 1 0 0 2 0 0 0 0 0 0 1 0 0 0 1 0 0 1 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 2 2 1 1 1 1 2 0 0 1 0 1 0 0 0 1 0 1 0 2 1 0 0 0 1 1 0 1 0 2 0 0 0 0 0 0 0 0 0 Amplification Peak 3 1q24.3 chr1:172019584-172206659(probes 81309:81426) chr1:172102228-172119581(probes 81350:81355) chr1:120527362-176736461(probes 67522:83775) 2.4164e-21 4.3614e-18 0: t<0.1; 1: 0.10.9 2 0 1 0 1 0 0 1 0 0 0 1 0 0 0 0 1 1 2 0 0 2 0 2 0 2 2 0 0 0 2 0 0 0 2 0 2 0 0 0 1 0 0 0 0 1 0 2 2 0 1 0 0 0 2 0 1 0 1 0 2 2 0 1 0 0 0 1 0 0 0 0 2 2 2 0 1 1 1 0 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 1 0 2 1 2 1 0 1 0 2 1 0 1 1 0 0 0 0 0 0 0 0 0 2 0 1 2 0 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 0 1 1 0 2 1 1 0 1 1 0 1 2 2 1 1 1 0 0 1 2 1 0 0 1 0 0 0 0 2 0 1 0 0 0 1 1 0 1 1 1 0 0 0 0 1 1 0 0 2 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 2 0 0 0 0 0 1 0 0 2 2 1 1 0 1 2 0 0 1 1 0 1 2 0 1 0 1 0 1 1 0 0 0 1 1 0 2 0 2 0 2 0 1 0 0 0 0 0 Amplification Peak 4 2p11.2 chr2:82640170-97591130(probes 175954:179301) chr2:85516072-85580224(probes 177571:177608) chr2:85461013-85668972(probes 177520:177641) 0.15096 0.15096 0: t<0.1; 1: 0.10.9 0 0 0 0 0 0 0 0 0 1 0 1 2 0 0 0 1 0 1 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 2 0 0 2 0 1 1 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 1 0 1 2 0 2 0 0 1 1 0 0 0 0 0 0 0 0 2 0 1 1 1 0 1 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 1 1 1 0 0 0 1 2 1 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 2 0 1 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 1 1 Amplification Peak 5 3p12.1 chr3:86917447-87350419(probes 308385:308616) chr3:86946757-87113137(probes 308395:308483) chr3:85169204-93740691(probes 307615:310032) 3.7048e-09 3.7048e-09 0: t<0.1; 1: 0.10.9 0 0 1 0 0 0 2 0 0 0 0 1 0 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 2 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 1 2 0 0 2 1 1 0 1 0 1 1 1 0 0 0 1 1 0 2 0 0 0 2 1 0 0 0 2 1 2 1 0 2 0 0 2 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 1 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 1 1 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 2 0 0 1 2 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 2 1 2 2 0 0 1 0 0 0 1 1 0 1 0 0 2 0 0 0 0 0 1 0 1 0 0 0 0 0 Amplification Peak 6 4q12 chr4:48068784-58112347(probes 393286:396710) chr4:53620096-53649677(probes 393778:393790) chr4:53620096-53656692(probes 393778:393793) 0.13735 0.13735 0: t<0.1; 1: 0.10.9 0 0 0 0 0 0 1 2 0 0 0 1 0 0 0 1 1 2 0 0 1 1 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 1 1 0 2 1 0 1 1 0 0 0 0 0 0 0 0 0 1 1 1 1 2 1 2 1 0 1 0 0 1 0 1 1 0 0 0 1 1 0 0 0 0 0 1 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 2 0 1 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 1 1 1 0 0 1 0 1 0 2 0 0 0 1 0 0 1 2 0 1 0 0 1 0 0 0 1 1 0 0 1 0 0 0 0 0 1 1 0 0 1 0 0 1 0 1 2 1 1 1 0 0 1 0 0 0 1 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 1 Amplification Peak 7 5p15.33 chr5:1019815-1300024(probes 467478:467485) chr5:1020355-1288693(probes 467479:467483) chr5:1-4510919(probes 467429:469685) 1.4189e-05 1.4189e-05 0: t<0.1; 1: 0.10.9 2 0 1 2 0 1 1 1 1 0 0 0 1 0 0 1 1 1 1 2 1 0 1 1 1 2 2 0 0 0 0 0 1 0 0 2 1 0 0 2 0 0 0 2 0 1 0 0 1 1 2 0 0 0 1 0 1 0 0 1 0 0 1 1 0 0 0 1 0 1 0 0 0 1 0 1 0 2 1 0 1 0 1 1 0 0 1 2 1 0 2 0 0 0 0 1 0 1 0 2 2 0 2 1 1 0 2 1 1 2 2 0 2 1 1 1 0 0 0 0 1 1 0 0 2 1 0 0 0 0 1 0 0 1 0 0 2 0 0 0 2 0 0 0 1 0 0 1 0 0 1 0 0 0 0 2 2 0 2 0 1 1 1 0 0 0 0 1 0 0 1 0 1 0 2 0 0 0 0 1 0 0 0 2 1 0 0 0 0 0 1 0 0 0 1 2 0 0 2 0 0 1 1 1 0 0 2 2 0 0 0 1 0 2 0 1 0 2 1 1 0 1 1 1 0 0 1 1 0 0 1 0 0 1 0 1 0 0 1 2 2 0 0 2 0 1 0 2 0 1 0 1 0 0 0 1 1 Amplification Peak 8 6p21.1 chr6:41687253-42194234(probes 592096:592368) chr6:42107036-42159255(probes 592312:592341) chr6:41700391-42199410(probes 592109:592370) 0.031491 0.031491 0: t<0.1; 1: 0.10.9 1 0 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 1 0 1 1 0 0 0 0 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 2 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 2 0 0 0 0 0 0 2 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 2 0 0 0 1 0 2 1 1 0 1 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 0 0 0 0 0 1 0 2 0 0 0 1 1 0 0 0 0 1 0 2 0 0 0 0 1 0 2 0 1 0 0 1 0 0 0 0 0 1 1 0 0 0 1 1 1 0 0 0 0 1 0 0 0 0 0 0 1 0 0 1 2 0 0 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 1 2 0 2 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 2 1 0 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 Amplification Peak 9 6q25.1 chr6:148810209-149693136(probes 650611:651250) chr6:149085331-149141277(probes 650788:650841) chr6:132613799-153008574(probes 640640:653503) 5.3375e-09 5.3375e-09 0: t<0.1; 1: 0.10.9 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 1 0 1 2 0 2 0 0 0 0 2 0 2 0 0 0 2 0 0 0 2 0 0 1 2 0 1 2 0 2 2 0 0 1 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 1 0 0 0 0 0 0 2 1 0 1 2 0 1 2 0 0 2 0 0 0 0 0 0 0 0 0 2 1 0 0 0 1 1 1 0 1 0 0 1 0 1 0 1 0 1 0 2 2 0 0 0 1 0 0 1 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 2 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 2 1 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 1 2 0 0 0 1 0 2 1 0 1 0 1 0 0 0 0 0 0 0 0 1 1 0 0 0 2 1 0 0 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 1 0 1 0 0 1 0 1 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 Amplification Peak 10 7q31.2 chr7:114122507-116100184(probes 720856:721937) chr7:115032762-115064633(probes 721323:721339) chr7:115032762-115166897(probes 721323:721406) 0.17838 0.17838 0: t<0.1; 1: 0.10.9 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 1 1 1 0 1 1 0 0 0 0 0 0 1 2 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 2 0 1 2 0 0 0 1 1 1 1 0 2 1 0 1 0 0 0 0 0 0 0 1 0 1 0 0 0 1 0 1 1 1 1 0 1 1 2 0 1 0 2 0 0 0 0 0 1 0 2 1 2 0 0 0 1 0 2 0 0 0 0 0 0 2 0 0 0 0 1 0 1 1 0 0 1 0 0 0 0 2 1 0 2 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 1 1 0 0 1 0 2 0 1 0 2 0 0 0 2 0 0 1 1 0 0 0 0 0 1 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 1 0 0 2 0 0 0 0 Amplification Peak 11 8p11.22 chr8:37911089-38852966(probes 766202:766625) chr8:38382038-38428656(probes 766411:766435) chr8:38237935-38469302(probes 766334:766456) 0.16281 0.16281 0: t<0.1; 1: 0.10.9 1 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 1 2 1 1 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 1 1 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 1 1 0 1 0 2 2 0 1 1 0 0 1 0 0 0 0 0 0 0 2 1 1 0 0 1 1 0 0 1 0 1 0 2 0 0 0 0 0 0 0 0 0 1 2 0 0 2 1 0 0 2 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 1 0 1 1 0 1 1 1 1 0 0 0 1 0 1 0 2 1 0 0 0 0 0 0 1 0 1 0 2 1 0 0 0 0 0 0 0 1 1 0 0 1 1 0 1 1 0 0 0 0 0 0 0 0 2 0 0 0 0 0 1 0 0 0 1 1 0 2 0 0 0 1 0 1 1 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 2 0 0 1 0 0 1 0 1 0 0 0 0 0 Amplification Peak 12 8q24.21 chr8:54604081-146364022(probes 772689:825516) chr8:127694324-127923765(probes 814847:815011) chr8:127694324-127927968(probes 814847:815014) 0.18425 0.18425 0: t<0.1; 1: 0.10.9 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 1 1 2 1 0 0 2 1 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 2 0 0 0 0 1 0 0 0 2 0 0 1 0 0 0 1 0 2 0 0 1 0 0 0 0 0 0 0 1 1 2 0 0 1 0 0 0 1 0 0 0 0 0 0 0 1 2 0 1 2 0 1 1 0 0 0 0 0 2 0 0 1 0 0 0 0 0 2 1 1 0 0 0 0 2 0 2 0 1 0 0 0 0 0 2 1 1 0 0 0 0 0 0 0 0 1 0 0 2 2 0 1 0 1 0 0 0 0 1 1 0 0 0 0 0 1 0 0 1 2 0 0 0 0 0 0 2 1 0 1 0 0 1 1 0 0 1 0 1 1 0 0 1 1 0 1 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 1 1 2 1 2 0 2 1 0 1 1 1 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 Amplification Peak 13 11q22.2 chr11:101789694-102613189(probes 1029335:1029686) chr11:102263274-102538951(probes 1029434:1029631) chr11:101824125-102572827(probes 1029352:1029658) 0.038088 0.038088 0: t<0.1; 1: 0.10.9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 2 1 0 0 0 2 0 0 0 2 0 0 0 2 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 2 1 0 1 0 1 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 2 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Amplification Peak 14 12q15 chr12:69178021-69244387(probes 1086811:1086878) chr12:69199363-69243712(probes 1086815:1086877) chr12:65724773-80166055(probes 1084416:1093456) 1.6311e-75 1.6311e-75 0: t<0.1; 1: 0.10.9 0 2 2 2 0 0 0 2 0 0 0 0 0 0 0 0 0 2 2 2 0 2 2 2 2 1 2 2 2 2 0 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 2 2 2 2 0 0 1 0 0 0 0 1 2 1 0 0 2 0 0 0 0 0 0 2 0 0 1 1 0 1 0 0 1 0 0 0 0 0 0 1 0 1 0 2 2 2 2 0 0 0 0 2 0 1 1 0 0 0 0 2 2 2 2 0 0 2 0 2 0 1 0 0 0 0 0 2 0 0 0 1 1 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 2 0 0 1 0 0 0 0 1 1 1 0 0 0 1 0 1 0 1 0 2 1 1 1 2 0 0 0 1 1 0 0 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 1 0 1 0 0 2 0 0 2 0 Amplification Peak 15 13q34 chr13:113363456-114881111(probes 1179701:1180088) chr13:114012899-114047530(probes 1179921:1179932) chr13:111246760-115169878(probes 1178456:1180150) 1.1494e-05 1.1494e-05 0: t<0.1; 1: 0.10.9 2 0 0 0 0 0 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 2 0 0 2 0 0 0 0 2 0 2 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 1 1 0 0 0 1 0 0 2 0 0 0 0 1 0 0 0 0 1 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 2 0 1 0 0 0 0 0 1 0 0 0 0 1 0 1 2 0 0 1 0 0 2 0 0 0 1 0 0 0 0 0 0 0 0 1 2 0 0 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 2 0 1 0 0 1 0 0 2 0 0 1 2 0 0 1 0 Amplification Peak 16 15q26.3 chr15:95392151-102531392(probes 1269549:1273516) chr15:101882381-102531392(probes 1273511:1273516) chr15:99538632-102531392(probes 1272431:1273516) 0.053277 0.053277 0: t<0.1; 1: 0.10.9 0 0 2 1 0 1 1 1 0 0 0 1 0 0 1 0 1 0 2 1 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 1 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 1 1 1 1 0 0 1 1 1 0 0 2 0 0 0 0 0 0 0 1 0 0 0 2 0 0 0 1 0 0 0 0 0 0 2 0 2 0 1 0 0 0 0 0 1 2 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 0 1 1 2 0 0 0 0 0 0 1 1 0 0 0 0 0 0 2 1 0 1 0 1 1 0 1 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 1 0 0 0 1 0 0 0 0 2 0 1 0 0 0 0 0 0 1 0 0 2 1 0 0 0 0 1 2 0 1 0 0 0 2 0 2 0 1 1 1 1 0 1 1 2 2 0 1 0 0 0 0 0 1 0 0 0 0 2 0 1 0 0 2 0 0 2 0 0 0 0 2 0 0 0 0 1 Amplification Peak 17 17p12 chr17:11702856-15565257(probes 1319747:1321382) chr17:12623417-12729127(probes 1320345:1320406) chr17:8070789-25274375(probes 1317314:1323542) 9.3248e-17 0.0035007 0: t<0.1; 1: 0.10.9 1 0 1 0 0 2 2 1 0 0 0 1 2 1 0 0 1 1 0 1 0 2 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 2 0 1 1 0 2 2 1 2 0 2 0 0 0 1 0 2 0 0 0 0 0 1 2 0 0 2 0 2 0 0 0 0 0 0 2 2 0 0 0 0 0 0 1 0 1 0 1 1 2 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 1 1 0 0 1 1 1 1 0 0 0 0 0 1 0 0 0 0 0 0 1 2 1 0 0 0 1 1 0 2 1 0 1 0 1 1 0 1 0 1 0 1 2 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 1 2 1 1 1 1 2 0 0 0 0 0 0 0 0 0 1 2 0 0 2 0 2 2 0 1 1 0 1 2 0 0 1 0 0 0 0 0 0 1 2 0 1 1 1 0 1 0 0 2 1 0 0 0 0 2 0 0 0 1 1 0 2 1 0 2 2 1 1 1 2 1 0 1 0 0 0 0 1 Amplification Peak 18 17p11.2 chr17:17727944-18792890(probes 1322324:1322697) chr17:18008593-18013802(probes 1322471:1322475) chr17:8070789-25274375(probes 1317314:1323542) 8.4923e-19 2.3424e-11 0: t<0.1; 1: 0.10.9 1 0 0 0 0 0 2 1 0 0 0 1 2 1 0 0 1 1 0 1 0 2 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 2 0 1 1 0 2 2 0 0 0 2 0 0 0 2 0 2 2 0 0 0 0 1 2 2 0 1 2 2 0 2 0 0 0 0 2 2 0 0 0 0 0 0 1 0 1 1 2 1 2 1 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 1 2 2 0 0 1 1 1 0 0 0 0 0 1 0 0 0 0 0 0 1 2 1 0 0 0 1 1 0 2 2 0 1 0 0 1 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 1 2 1 1 1 1 1 1 0 0 1 0 0 0 0 0 1 2 0 0 2 0 2 2 0 1 1 0 1 2 1 0 0 0 0 0 0 2 0 0 2 0 1 1 1 0 1 0 0 2 1 0 0 0 0 2 0 0 2 2 1 0 2 1 0 2 2 1 1 1 2 1 0 1 0 0 0 0 1 Amplification Peak 19 17q24.3 chr17:57292827-81195210(probes 1338862:1350713) chr17:68743653-68820968(probes 1345053:1345105) chr17:68301261-69132098(probes 1344722:1345380) 0.032181 0.032181 0: t<0.1; 1: 0.10.9 1 0 0 0 0 1 0 0 1 0 0 1 0 0 0 1 1 1 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 1 0 1 2 1 2 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 1 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 2 1 1 2 1 0 0 0 0 1 2 0 0 2 0 0 2 0 1 0 0 1 0 1 1 1 0 2 1 0 0 0 0 0 0 1 0 0 0 0 0 0 2 1 0 0 0 0 1 0 0 0 0 0 0 0 1 1 1 0 1 1 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 1 2 1 0 0 0 1 0 1 0 1 0 0 0 0 0 1 1 2 1 1 1 1 2 1 0 1 1 0 0 0 0 1 0 0 0 1 1 1 1 0 0 0 0 2 1 0 0 0 0 1 0 0 0 0 0 Amplification Peak 20 19p13.2 chr19:6882410-7518283(probes 1395007:1395174) chr19:7407238-7437348(probes 1395131:1395140) chr19:6882431-7545986(probes 1395008:1395184) 0.0055689 0.0055689 0: t<0.1; 1: 0.10.9 1 1 1 0 1 0 1 2 0 0 1 2 0 0 1 1 0 1 1 1 2 2 0 0 1 1 2 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 1 1 0 1 0 1 0 0 0 1 0 1 0 0 0 2 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 0 1 2 1 0 2 0 1 1 1 1 1 1 1 0 0 0 0 2 1 0 1 0 0 2 2 0 1 0 0 1 2 1 0 1 0 0 1 0 0 0 0 0 1 0 1 0 1 1 2 1 0 0 0 1 0 0 1 0 0 0 0 2 1 1 1 0 0 0 0 1 0 0 0 0 1 1 2 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 1 2 0 0 0 2 1 1 0 0 1 0 0 2 1 0 1 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 1 1 0 1 0 1 0 0 0 0 0 0 0 0 1 2 1 1 1 1 1 1 1 0 1 0 0 1 0 1 0 0 1 0 0 0 1 1 0 0 0 0 0 1 0 2 2 0 0 0 1 Amplification Peak 21 19q12 chr19:30245403-30321189(probes 1403529:1403594) chr19:30304858-30316875(probes 1403567:1403593) chr19:28240495-33660696(probes 1401983:1405815) 6.1748e-09 6.1748e-09 0: t<0.1; 1: 0.10.9 1 0 1 0 0 0 1 0 0 0 1 2 0 0 0 0 0 0 1 1 2 2 0 0 1 1 0 0 2 0 0 0 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 2 0 1 0 0 1 0 0 1 0 2 0 2 0 0 2 0 0 0 1 1 0 0 0 0 0 0 0 2 1 2 1 1 2 0 2 2 0 0 1 0 1 0 0 0 0 0 2 1 0 0 2 2 2 2 0 0 0 1 1 1 1 2 0 2 1 0 0 0 0 0 1 0 0 0 0 1 0 1 0 0 0 1 0 0 2 0 0 1 0 0 0 1 0 0 0 0 0 1 0 1 0 2 0 1 0 0 1 1 2 2 0 0 0 0 0 0 2 0 1 0 0 1 0 0 0 0 0 0 0 1 1 0 0 1 1 2 0 0 0 2 0 0 0 0 0 0 0 0 0 2 0 0 2 2 0 0 0 0 1 1 1 0 0 0 2 0 2 0 0 2 0 0 1 1 0 1 0 0 1 1 1 1 1 0 1 0 1 0 0 1 0 0 0 0 2 0 0 2 0 0 0 0 0 2 0 0 0 0 Amplification Peak 22 20q13.33 chr20:51959332-63025520(probes 1446913:1453816) chr20:60527043-60532396(probes 1453219:1453219) chr20:60458069-60869804(probes 1453174:1453394) 0.033553 0.033553 0: t<0.1; 1: 0.10.9 1 0 1 0 0 0 1 2 0 0 0 0 0 0 0 0 1 1 1 1 2 1 2 1 1 1 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 2 0 1 0 0 2 0 1 0 0 1 0 0 0 0 0 2 0 1 0 1 0 1 2 1 0 1 2 0 0 0 0 0 0 0 1 0 1 0 1 1 1 0 1 0 0 1 0 2 0 1 0 1 1 2 0 0 0 0 0 1 1 0 0 1 2 0 0 1 0 1 0 0 0 0 0 0 1 0 0 2 1 0 0 0 0 2 0 0 0 0 0 0 1 0 1 2 0 0 0 0 1 0 1 0 1 0 2 0 1 0 0 0 0 1 0 0 1 1 2 0 0 1 1 1 1 1 0 0 0 0 0 0 0 0 1 0 1 1 0 0 0 2 1 2 0 2 1 0 0 1 0 0 2 0 2 0 1 0 0 1 1 1 1 2 0 0 2 2 1 0 0 0 0 0 0 0 0 0 0 2 0 1 1 0 0 1 0 0 2 0 0 0 0 0 0 0 Amplification Peak 23 21q21.1 chr21:16353532-18006975(probes 1454440:1455432) chr21:16891980-16895119(probes 1454854:1454855) chr21:16891285-16899143(probes 1454852:1454859) 0.21557 0.21557 0: t<0.1; 1: 0.10.9 1 0 0 0 0 0 0 2 0 0 0 1 0 0 0 1 0 0 0 1 2 1 0 0 1 0 0 0 0 2 2 0 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 2 1 0 2 2 0 2 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 1 1 1 0 0 0 0 1 0 1 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 1 0 1 0 0 2 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 1 2 0 1 0 1 0 0 1 0 0 0 0 1 0 1 2 0 0 0 1 1 2 0 1 0 1 2 0 0 0 1 0 0 0 0 0 2 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 1 1 0 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 Amplification Peak 24 Xp21.2 chrX:9466686-63831850(probes 1492315:1514865) chrX:30420468-30484642(probes 1503038:1503100) chrX:30171728-31187193(probes 1502847:1503279) 0.19108 0.19108 0: t<0.1; 1: 0.10.9 1 0 1 1 0 0 1 1 0 1 0 1 0 1 0 0 0 0 0 0 1 2 1 1 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 1 1 2 0 0 0 0 1 0 1 0 1 0 1 2 0 0 1 0 0 0 0 0 0 0 1 0 1 1 0 0 0 0 0 0 0 2 1 2 2 0 2 1 0 0 0 0 2 1 0 0 0 0 0 1 0 1 1 2 2 1 0 0 0 1 2 0 1 1 0 2 0 1 0 1 0 0 2 0 0 0 0 0 0 2 1 1 0 1 0 0 0 0 0 1 0 0 0 2 0 0 0 1 1 2 0 0 1 0 2 0 2 0 1 0 0 2 1 0 0 1 0 0 1 0 0 1 0 0 0 0 0 2 0 0 0 2 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 2 0 0 1 1 0 0 2 0 1 0 0 1 0 1 0 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 1 2 1 1 0 0 1 0 1 0 0 1 0 1 1 0 1 1 1 1 1 0 2 0 2 1 0 0 0 0 Amplification Peak 25 Xq21.1 chrX:81233210-82660744(probes 1521310:1521962) chrX:82260757-82279635(probes 1521786:1521790) chrX:82157645-82460429(probes 1521706:1521882) 0.041746 0.041746 0: t<0.1; 1: 0.10.9 1 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 2 2 1 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 2 0 0 0 0 0 0 0 1 0 0 0 2 0 0 0 0 0 0 1 0 0 0 1 1 0 1 0 1 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 1 0 0 0 2 0 0 0 1 1 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 2 0 0 1 0 Deletion Peak 1 1p36.32 chr1:1-5923787(probes 1:1795) chr1:3685441-3695999(probes 223:225) chr1:1-19113057(probes 1:8526) 8.425e-11 8.425e-11 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 0 0 0 0 1 1 0 0 1 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 1 0 1 1 0 1 0 0 1 1 0 0 0 1 1 1 1 1 1 0 0 1 1 0 0 0 0 0 0 0 0 1 1 0 0 0 0 1 1 0 1 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 1 1 0 1 0 1 0 1 0 0 1 0 1 0 1 0 1 1 1 1 0 1 0 0 0 0 0 1 1 0 0 0 1 1 1 0 0 0 0 0 0 0 0 1 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 1 1 1 1 0 1 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 Deletion Peak 2 1q44 chr1:208416154-249250621(probes 103194:128570) chr1:247691477-247698665(probes 128493:128496) chr1:202140437-249250621(probes 99366:128570) 2.6086e-08 2.6086e-08 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 1 1 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 1 1 1 1 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 1 1 1 1 0 0 0 1 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 1 1 0 1 1 0 1 1 0 0 1 0 0 1 0 0 1 0 0 0 1 1 0 0 1 0 1 0 1 1 0 0 1 0 0 0 1 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 1 1 0 0 1 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 1 1 1 1 1 1 1 1 0 0 0 1 0 1 0 0 0 0 1 1 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 1 Deletion Peak 3 2p25.3 chr2:1-1917603(probes 128571:128753) chr2:1-489054(probes 128571:128571) chr2:1-3303807(probes 128571:129665) 3.2554e-05 3.2404e-05 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 1 0 0 0 1 1 0 1 0 0 1 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 1 0 0 1 1 1 1 0 0 1 0 1 1 0 0 1 0 1 1 1 0 0 1 0 0 0 1 1 1 1 1 0 1 0 0 0 1 0 0 1 1 0 0 0 0 1 1 1 0 1 0 1 0 1 0 0 1 0 1 1 0 1 0 0 1 0 0 0 0 0 1 0 0 1 1 1 0 1 0 0 1 0 1 1 0 0 0 0 0 0 0 1 0 0 1 1 0 1 1 1 1 1 0 0 0 0 1 0 1 0 1 1 0 0 0 1 1 0 1 1 0 0 1 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 1 1 0 0 1 0 1 0 0 0 0 0 0 0 0 1 0 1 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 1 0 1 1 0 1 0 1 0 1 0 1 1 0 0 0 1 0 1 0 0 0 0 0 Deletion Peak 4 2q37.3 chr2:233877222-243199373(probes 254127:259357) chr2:239748105-240337579(probes 257981:258149) chr2:208126720-243199373(probes 238766:259357) 7.1647e-24 0.0016093 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 0 1 0 0 0 1 1 0 0 1 1 0 0 0 1 1 0 0 0 0 1 0 1 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 1 0 1 1 0 0 1 0 1 0 0 1 0 0 0 1 0 1 0 1 0 0 0 0 1 0 0 1 1 1 1 1 1 1 1 0 0 0 1 0 0 1 1 0 0 0 0 1 1 1 1 1 1 1 1 0 0 0 1 1 1 1 0 0 0 0 0 0 1 0 0 1 1 1 0 1 1 0 0 1 0 1 1 0 0 1 0 0 0 0 0 0 0 1 0 0 1 1 1 0 0 0 0 1 1 1 1 0 1 0 1 1 0 0 1 0 0 1 0 0 1 1 1 0 0 1 1 0 0 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 1 1 0 0 1 0 0 0 1 0 1 0 0 1 0 1 0 1 1 1 1 0 1 0 1 1 1 0 0 0 0 0 0 0 0 0 0 Deletion Peak 5 2q37.3 chr2:242162274-243199373(probes 259185:259357) chr2:242408088-242418361(probes 259312:259313) chr2:208126720-243199373(probes 238766:259357) 1.0055e-32 1.3282e-19 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 0 1 0 0 0 1 1 0 0 1 1 0 0 0 1 1 0 0 0 0 1 0 1 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 1 1 1 0 1 0 1 0 0 0 1 1 1 0 0 0 0 0 0 1 0 1 0 1 0 0 0 0 1 0 0 1 1 1 1 1 1 1 1 0 0 0 1 0 0 1 1 0 0 0 0 1 1 1 0 1 1 1 1 0 0 0 1 1 1 1 0 0 0 0 1 0 1 0 0 1 1 1 0 1 1 0 0 1 0 1 1 0 0 1 0 0 0 0 0 1 1 1 0 0 1 1 1 0 0 0 0 1 1 1 1 0 1 0 1 1 0 0 1 1 0 1 0 0 1 1 1 1 0 0 1 0 0 1 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 1 1 0 0 1 0 0 0 1 0 1 0 0 1 0 1 0 1 1 1 1 0 1 0 1 1 1 0 0 0 0 0 0 0 0 0 0 Deletion Peak 6 3p21.31 chr3:43774427-66121046(probes 283950:296549) chr3:49224733-49306825(probes 286609:286634) chr3:47079006-64815960(probes 285822:295489) 0.0034746 0.0034746 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 1 1 0 1 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 1 1 1 0 1 0 1 0 1 1 0 0 1 0 0 0 1 0 1 0 1 0 0 0 1 1 0 1 0 0 1 1 0 0 0 1 1 0 0 1 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 1 0 0 0 1 1 1 1 0 0 0 0 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 1 0 1 0 1 1 0 1 0 0 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 Deletion Peak 7 3q13.31 chr3:115440285-118620828(probes 321863:324091) chr3:115528065-117719768(probes 321905:323536) chr3:116606543-116609738(probes 322721:322722) 0.016788 0.061697 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 1 1 0 1 0 1 1 0 0 0 0 1 1 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 1 0 0 1 0 1 0 0 0 1 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 Deletion Peak 8 3q29 chr3:161217822-198022430(probes 347234:365300) chr3:195937679-195973243(probes 364974:364987) chr3:195144439-198022430(probes 364883:365300) 0.0086757 0.062718 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 1 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 1 1 0 1 0 1 0 0 0 0 0 1 1 0 0 0 0 0 1 0 0 1 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 1 0 1 0 0 0 0 0 1 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 1 Deletion Peak 9 4q35.1 chr4:179280062-191154276(probes 463089:467428) chr4:183534656-184242476(probes 465384:465403) chr4:156678964-191154276(probes 450599:467428) 2.3968e-14 2.3968e-14 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 1 1 0 0 1 1 0 0 1 0 0 0 1 0 0 0 1 0 0 1 0 0 0 1 1 0 1 0 0 1 0 0 0 1 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 1 1 1 1 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 1 1 1 0 1 0 1 1 1 1 0 1 1 1 1 0 1 0 0 1 1 0 0 0 1 1 0 1 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 1 0 0 1 0 0 0 1 0 1 1 0 0 1 0 0 0 0 1 0 1 1 1 1 0 0 0 1 0 0 0 1 1 0 1 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 1 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 1 0 0 1 0 0 0 1 0 1 0 1 0 1 0 1 0 0 1 0 1 0 1 1 0 1 1 1 1 1 0 1 0 0 0 0 0 0 0 Deletion Peak 10 5p15.33 chr5:1-5129938(probes 467429:470197) chr5:1314317-1350010(probes 467493:467501) chr5:1299330-1359937(probes 467486:467504) 0.054392 0.054449 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 Deletion Peak 11 6p25.3 chr6:1-25758514(probes 567455:584638) chr6:1-1015749(probes 567455:567455) chr6:1-18985048(probes 567455:580047) 0.014376 0.014448 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 1 0 1 0 0 1 1 1 1 1 0 1 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0 1 0 1 1 1 1 0 1 1 0 1 1 0 1 1 0 0 0 1 1 0 1 0 0 1 1 0 1 0 0 0 0 0 0 1 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 1 1 1 1 0 0 0 1 0 0 0 0 0 1 0 0 1 1 0 0 0 0 1 0 1 0 1 0 0 0 0 0 1 0 1 1 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 1 1 0 0 0 0 0 1 1 0 0 1 1 0 0 0 0 0 1 1 0 0 0 1 0 1 1 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 1 0 0 1 Deletion Peak 12 6q14.1 chr6:66417081-104031403(probes 603178:624028) chr6:76456303-76635373(probes 609023:609124) chr6:67487815-83633736(probes 603811:612822) 0.0021591 0.0021144 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 1 0 0 0 1 1 0 1 0 1 0 1 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 1 0 1 1 0 0 0 0 1 0 1 1 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 1 1 0 0 1 0 1 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 1 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 1 1 0 0 0 0 0 0 0 0 1 1 0 0 0 1 0 0 1 1 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 1 1 1 0 1 0 1 0 1 0 1 0 1 1 0 0 0 0 0 1 1 0 1 0 1 0 0 1 1 0 0 1 0 1 1 0 0 1 1 1 0 0 0 0 1 0 0 1 Deletion Peak 13 7q36.3 chr7:157210222-159138663(probes 743921:744406) chr7:158375971-159138663(probes 744405:744406) chr7:143703621-159138663(probes 736846:744406) 2.9687e-06 2.9727e-06 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 1 0 0 0 0 1 0 1 0 0 1 0 0 0 0 1 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 1 1 0 0 0 0 0 0 0 0 1 0 1 0 1 0 1 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 1 1 0 1 1 0 0 1 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 1 0 1 0 0 0 1 0 1 0 0 1 0 0 1 0 0 1 0 0 1 1 0 1 0 0 1 0 1 1 0 1 1 1 0 0 0 0 1 1 1 0 1 0 0 0 0 0 0 0 Deletion Peak 14 8p23.3 chr8:1-4251018(probes 744407:746248) chr8:1-617884(probes 744407:744407) chr8:1-8258018(probes 744407:747483) 8.3487e-08 8.5527e-08 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 1 1 0 0 1 1 0 0 1 0 0 0 0 0 0 1 0 1 1 0 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 1 0 1 0 1 0 1 0 1 0 0 1 1 0 1 0 0 1 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 1 0 1 0 0 0 1 1 0 0 0 0 0 0 0 1 1 0 0 0 1 0 1 1 0 0 1 1 0 1 0 0 1 1 1 0 0 0 0 1 1 0 0 1 1 1 1 0 0 1 1 0 0 0 0 0 1 0 0 1 0 0 0 0 0 1 1 1 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 1 0 1 0 0 0 1 1 0 1 0 0 1 0 0 0 0 0 0 1 0 0 1 0 1 0 1 0 1 0 0 0 0 0 0 1 Deletion Peak 15 9p24.3 chr9:1-3826080(probes 825517:827513) chr9:840502-1540137(probes 825571:825669) chr9:1-3735467(probes 825517:827436) 5.1003e-05 0.18248 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 1 0 0 0 1 1 1 0 1 0 0 1 0 1 1 1 1 0 0 0 1 0 1 1 0 0 0 0 0 1 1 1 0 0 0 0 0 1 1 0 1 1 1 1 1 0 1 0 0 1 0 0 0 0 1 1 1 0 0 0 0 0 0 1 1 0 0 1 0 0 1 0 0 1 1 1 1 0 0 0 1 1 1 0 1 1 1 0 1 0 1 0 0 0 0 1 1 0 0 1 1 1 1 1 0 1 0 0 0 1 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 1 1 0 0 1 0 0 1 0 0 1 0 1 1 0 1 0 0 1 1 0 0 1 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 0 1 0 1 0 0 0 1 0 1 0 0 0 0 1 1 1 0 0 0 1 1 0 0 0 1 0 1 1 1 0 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 1 Deletion Peak 16 9p21.3 chr9:21931610-22448737(probes 838907:839241) chr9:21999616-22011391(probes 838945:838969) chr9:18188243-29374153(probes 836050:843201) 4.1463e-30 3.0361e-26 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 1 0 0 0 1 1 0 0 0 0 0 1 0 1 1 1 1 0 1 1 1 1 1 1 0 0 1 0 0 1 1 0 0 0 0 0 0 1 0 0 1 1 1 1 1 0 1 1 0 1 0 0 1 0 1 1 0 0 0 0 0 1 0 1 1 0 0 1 0 0 1 0 0 1 1 1 1 0 0 0 1 1 1 0 1 1 1 0 1 0 1 0 0 0 0 1 1 0 0 0 1 1 1 1 0 0 0 0 1 1 1 1 1 0 0 1 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 0 0 1 0 0 1 0 1 0 0 1 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 1 0 0 1 0 1 0 0 1 0 1 1 1 0 0 1 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 1 0 1 0 0 1 1 0 1 0 0 1 0 1 1 0 1 0 1 1 1 1 0 0 0 0 1 1 1 0 0 0 0 0 1 0 0 1 1 0 1 0 1 1 0 0 0 1 Deletion Peak 17 9q34.3 chr9:134952380-141213431(probes 890563:893171) chr9:140751190-141213431(probes 893110:893171) chr9:134856322-141213431(probes 890493:893171) 0.00032085 0.00031751 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 1 1 1 1 1 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 1 0 0 1 0 1 0 0 1 1 0 1 1 1 0 0 0 0 0 1 0 0 0 0 1 0 1 0 1 1 1 0 0 1 1 0 0 1 0 0 1 0 0 1 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 1 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 Deletion Peak 18 10p15.3 chr10:1-857150(probes 893172:893314) chr10:1-742144(probes 893172:893256) chr10:1-3137544(probes 893172:894436) 1.0469e-15 1.0298e-15 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 0 1 0 1 1 1 1 0 0 1 0 1 0 1 0 1 0 0 1 1 0 0 1 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 1 0 0 1 1 1 0 1 0 1 0 1 1 0 0 1 1 1 1 1 0 0 0 0 1 1 1 1 0 1 0 1 0 1 1 0 0 1 1 1 0 0 0 0 1 1 1 1 0 0 1 0 1 0 0 1 1 0 1 0 1 0 0 1 0 0 0 0 1 1 0 0 0 1 0 0 1 1 1 0 0 0 0 0 1 1 0 0 1 1 0 0 0 1 0 1 1 1 1 1 0 0 1 0 1 1 0 1 0 1 1 0 1 0 0 0 1 1 1 0 1 1 0 1 0 0 1 1 0 1 1 1 0 0 1 0 1 0 1 1 0 0 0 1 1 1 1 1 0 1 0 1 1 1 0 1 0 1 1 1 1 0 0 0 1 0 0 0 1 1 1 1 1 1 1 0 1 1 0 1 1 0 1 0 0 0 0 1 0 0 0 0 1 1 0 1 1 1 1 0 1 0 0 0 0 1 Deletion Peak 19 10q23.31 chr10:89617158-89755074(probes 945105:945307) chr10:89617402-89735907(probes 945106:945295) chr10:89187178-91264600(probes 944867:946321) 1.7918e-09 7.6387e-08 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 0 1 0 1 1 1 1 0 1 1 0 1 1 1 0 1 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 1 0 1 1 1 1 1 1 1 0 1 1 1 1 0 1 1 1 1 1 0 1 0 0 1 1 1 0 0 1 0 1 1 1 1 0 0 1 1 0 0 0 0 0 1 1 1 1 0 0 0 0 1 0 1 1 1 1 1 0 1 1 1 1 0 0 0 0 1 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 1 1 0 0 1 0 1 1 1 1 1 1 0 1 1 1 1 1 1 0 1 1 1 1 0 1 0 0 1 1 1 1 1 0 1 0 0 1 1 1 0 1 1 0 1 1 0 1 1 0 1 0 0 0 1 1 0 1 1 0 1 1 1 1 1 0 1 0 1 1 1 1 0 0 0 1 0 1 1 0 1 1 0 0 1 0 0 0 1 0 1 0 1 1 0 0 1 1 0 0 1 1 1 1 1 1 0 0 1 1 0 1 0 0 0 0 1 Deletion Peak 20 10q26.3 chr10:135190263-135534747(probes 973644:973660) chr10:135190430-135206872(probes 973646:973654) chr10:132065842-135534747(probes 972886:973660) 0.00010153 0.026433 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 0 1 0 1 1 0 1 0 1 0 0 1 1 1 1 1 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 1 1 0 1 1 0 1 0 1 1 0 1 1 1 1 1 1 1 1 1 1 0 1 0 0 1 1 1 0 0 1 0 1 1 0 1 0 0 1 1 0 0 0 0 0 1 1 1 1 0 0 0 0 1 0 0 1 0 1 1 0 1 0 1 1 0 0 0 0 1 1 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 1 0 1 1 0 1 0 1 0 1 1 1 1 1 1 0 1 1 0 0 1 1 0 1 1 1 1 0 1 0 1 1 1 1 1 1 0 1 0 0 1 1 1 0 1 1 0 1 1 0 1 1 0 1 0 0 0 1 1 0 1 1 0 1 1 1 1 1 0 1 0 1 0 1 1 0 1 0 0 0 1 1 0 1 1 0 0 1 0 0 0 1 0 1 0 0 0 0 0 1 1 1 0 1 1 1 1 1 1 1 1 1 1 0 1 0 0 0 0 1 Deletion Peak 21 11p15.5 chr11:1-496996(probes 973661:973672) chr11:1-496996(probes 973661:973672) chr11:1-7502262(probes 973661:977201) 8.2878e-09 8.2878e-09 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 0 1 1 0 0 0 1 0 0 1 1 0 0 1 1 0 0 1 1 1 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 1 1 0 1 1 1 0 1 0 1 0 1 0 0 0 1 1 1 0 0 1 1 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 1 1 1 0 0 1 0 0 0 1 0 1 1 0 0 0 0 0 1 1 0 1 1 1 0 1 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 1 0 1 1 0 0 0 0 0 1 1 0 1 1 0 0 0 0 1 1 1 0 0 1 0 1 1 1 1 1 1 0 0 0 1 0 0 1 0 1 1 0 0 0 0 0 1 1 0 1 0 1 0 1 0 0 1 1 1 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 1 0 1 0 0 0 1 0 0 1 1 0 1 1 1 1 1 0 1 1 1 1 0 0 0 0 1 1 1 1 0 1 1 1 1 0 0 0 1 1 1 0 1 0 0 0 0 1 Deletion Peak 22 11q23.1 chr11:102825636-135006516(probes 1029846:1050466) chr11:111588550-111639215(probes 1034969:1034994) chr11:91537654-135006516(probes 1022662:1050466) 1.8105e-09 0.00037078 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 0 0 1 0 0 1 1 0 1 1 1 0 1 0 0 1 1 1 1 1 0 1 1 0 0 0 0 1 1 0 0 1 0 0 0 1 1 0 0 0 0 0 1 1 1 1 0 1 0 0 0 0 0 1 0 0 0 1 0 1 1 0 1 1 0 0 0 0 1 0 0 1 0 0 1 1 1 1 0 1 0 0 1 1 0 0 1 0 1 0 0 0 0 0 1 1 0 0 1 1 1 1 1 0 1 1 1 1 1 0 0 0 0 1 1 0 0 0 1 1 1 0 1 1 1 0 0 0 1 1 0 1 0 1 0 1 0 1 0 0 0 0 0 1 0 1 0 1 0 0 1 0 1 0 0 0 0 1 1 0 1 0 0 0 1 0 1 1 0 1 0 0 0 1 1 0 1 1 1 0 1 1 1 0 1 1 0 1 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 1 1 1 0 1 1 1 1 1 0 0 1 0 1 0 0 1 0 1 1 1 1 0 1 0 0 1 0 1 1 1 0 1 0 1 0 0 0 0 0 Deletion Peak 23 11q25 chr11:133400280-135006516(probes 1050110:1050466) chr11:133796323-134022086(probes 1050383:1050406) chr11:91537654-135006516(probes 1022662:1050466) 1.601e-11 0.00024119 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 0 1 1 0 0 1 1 0 1 1 1 0 1 0 0 1 1 0 1 1 1 1 1 1 0 0 0 1 1 0 0 1 0 0 0 1 1 0 0 1 0 0 0 1 1 1 0 1 0 1 0 0 0 1 0 0 0 1 1 1 1 0 1 1 0 0 0 0 1 0 0 1 0 0 1 1 1 1 0 1 0 0 1 1 0 0 1 0 1 0 0 0 0 0 1 1 0 0 1 0 1 1 1 1 0 1 1 1 1 0 0 0 0 1 1 0 0 0 1 1 1 0 0 1 1 0 0 0 1 1 0 1 0 1 0 0 0 0 0 1 0 0 0 1 0 1 0 1 0 1 1 0 1 0 0 1 0 1 1 0 1 0 0 0 1 0 1 1 0 1 0 0 0 1 0 0 0 0 1 0 1 1 1 1 1 1 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 1 1 1 1 0 1 0 0 0 0 0 1 1 1 0 1 1 1 1 1 0 1 1 1 1 0 0 1 0 1 1 1 1 0 1 0 0 1 0 1 1 1 0 1 0 0 0 0 0 0 0 Deletion Peak 24 12p13.1 chr12:10962282-13525906(probes 1055857:1057301) chr12:12863471-12922322(probes 1057019:1057047) chr12:9405724-18431914(probes 1055147:1060367) 0.00028241 0.00044322 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 1 0 1 1 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 1 1 0 1 1 0 1 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 1 1 1 0 0 0 0 0 0 0 1 1 1 0 1 1 0 0 1 0 1 1 0 0 1 1 0 0 0 0 1 0 0 0 1 1 1 1 1 0 1 1 0 1 1 1 1 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 1 1 0 0 0 0 0 0 1 1 0 1 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 1 1 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 1 0 1 1 0 0 1 0 1 1 1 0 0 1 0 1 0 0 1 1 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 1 0 0 0 1 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 Deletion Peak 25 12q12 chr12:33514047-39688977(probes 1069895:1070135) chr12:33519526-39342878(probes 1069900:1069946) chr12:39259858-39261322(probes 1069924:1069925) 0.015597 0.020961 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 1 0 0 0 0 0 1 0 0 0 1 0 1 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 1 0 1 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 1 1 1 0 1 0 0 0 0 1 0 0 0 0 1 0 1 0 0 0 0 0 Deletion Peak 26 12q24.33 chr12:132611527-133851895(probes 1123854:1123882) chr12:133154543-133851895(probes 1123882:1123882) chr12:133071480-133851895(probes 1123869:1123882) 0.2358 0.23643 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 1 1 0 0 1 0 0 0 0 0 0 1 1 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1 1 0 0 1 0 0 0 1 0 1 0 0 0 0 1 0 0 0 1 0 1 0 1 1 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 1 1 0 1 0 0 0 0 0 1 1 0 0 1 0 1 1 0 0 0 0 0 1 0 0 0 1 1 0 0 1 0 0 1 1 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 1 0 1 0 1 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 1 0 1 0 1 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 1 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 1 Deletion Peak 27 13q14.2 chr13:48875329-49064807(probes 1142385:1142604) chr13:48875753-49060837(probes 1142386:1142602) chr13:1-90557232(probes 1123883:1164419) 1.3023e-59 1.3023e-59 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 0 1 0 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 1 1 0 0 1 1 0 0 0 1 0 1 0 0 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 0 1 1 0 1 0 0 1 1 1 1 1 1 0 1 1 1 1 1 0 1 1 1 0 0 0 0 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 0 0 1 1 1 0 0 0 0 1 1 1 0 1 1 1 0 1 0 1 1 0 0 0 1 0 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 0 1 1 1 1 1 0 1 0 0 1 1 1 1 1 1 0 1 1 1 1 1 1 0 0 0 0 1 1 1 1 1 0 1 1 1 1 1 0 1 1 1 1 0 1 0 0 0 1 0 1 1 1 1 1 1 0 1 1 0 0 1 1 1 1 0 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 0 0 0 0 Deletion Peak 28 14q24.1 chr14:65562996-84218136(probes 1204976:1216384) chr14:68278379-69199178(probes 1206344:1206881) chr14:67806121-75322326(probes 1206034:1210539) 0.0013077 0.0012874 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 1 0 1 0 0 0 0 0 1 1 0 0 0 1 1 0 1 1 1 1 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 1 0 1 0 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 1 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 1 1 1 0 1 0 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 1 1 0 1 0 0 0 1 1 0 1 0 1 1 0 0 1 0 1 0 0 1 0 1 0 1 0 1 0 0 0 0 0 1 1 1 0 1 0 1 1 1 0 0 0 0 1 0 1 0 1 0 1 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 1 1 0 0 1 1 0 1 0 0 1 0 0 0 0 0 0 0 0 Deletion Peak 29 15q11.2 chr15:1-48627916(probes 1229311:1241760) chr15:24328498-24900737(probes 1229773:1229821) chr15:24857648-24859709(probes 1229798:1229799) 0.18974 0.18788 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 1 0 1 0 0 0 1 0 1 0 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 1 1 0 0 0 1 0 0 1 1 0 1 1 0 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 Deletion Peak 30 16q11.2 chr16:31804435-55329012(probes 1287306:1293143) chr16:31845698-46624790(probes 1287321:1287339) chr16:31850300-47268607(probes 1287322:1287605) 0.0011106 0.0043181 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 0 1 1 0 0 1 0 0 1 0 0 1 1 0 1 1 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 1 0 0 1 0 1 0 1 1 0 1 1 0 1 0 1 1 0 1 1 1 0 1 0 1 0 1 1 0 0 0 0 0 0 0 0 1 1 0 1 1 1 0 0 0 0 1 0 1 0 0 0 1 1 0 1 1 0 0 0 1 1 1 1 1 1 0 0 1 1 0 1 0 0 1 0 0 1 1 0 1 0 1 1 1 0 1 0 0 0 0 0 0 0 1 0 1 1 1 1 0 1 0 1 1 1 1 1 0 1 0 1 1 1 1 1 1 1 1 0 0 0 1 1 0 0 1 1 1 1 0 0 1 0 0 1 0 1 1 1 0 0 1 0 0 1 1 1 0 0 0 0 1 0 1 1 0 1 1 1 1 1 0 1 0 1 1 1 0 0 0 0 0 0 1 1 0 1 1 0 0 1 1 0 1 0 1 1 0 0 1 0 1 1 0 0 1 1 1 1 0 1 1 0 1 1 1 0 0 1 0 0 0 1 Deletion Peak 31 16q23.1 chr16:78098006-79299841(probes 1306486:1307551) chr16:78129058-79247026(probes 1306517:1307522) chr16:78583258-78586506(probes 1307020:1307021) 0.0049799 0.010132 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 0 1 1 0 0 1 0 0 1 0 0 1 1 0 1 1 0 1 0 0 0 0 1 0 1 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 1 0 0 1 0 1 0 1 1 0 1 1 0 1 0 1 1 0 1 1 1 0 1 0 1 0 1 1 0 0 0 0 0 1 0 0 1 1 0 1 1 1 0 0 0 0 1 0 1 0 0 0 1 0 1 1 0 0 0 1 1 1 1 0 1 1 1 0 1 1 0 1 0 0 1 0 0 1 1 0 1 0 0 1 1 0 1 0 0 0 0 0 0 0 1 0 1 1 1 1 0 1 0 1 1 1 1 1 0 1 0 1 1 1 1 1 1 1 1 0 0 0 1 1 1 1 1 1 0 1 0 0 1 0 1 1 1 0 1 1 0 1 1 1 0 0 1 1 0 0 0 1 1 0 1 1 0 1 1 1 1 1 0 1 0 1 1 1 0 0 0 0 0 0 1 0 0 1 0 0 0 1 1 0 1 1 1 1 0 0 1 0 1 1 0 1 0 1 1 1 0 1 1 1 1 1 1 0 0 1 0 0 0 0 Deletion Peak 32 17p13.1 chr17:7549751-7593565(probes 1317117:1317125) chr17:7557018-7593565(probes 1317118:1317125) chr17:1-10544265(probes 1314014:1318863) 2.06e-52 2.06e-52 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 0 1 1 1 1 1 0 0 1 0 1 1 1 1 1 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 1 1 0 0 0 1 0 1 1 1 0 1 1 1 1 1 1 0 1 1 1 0 0 0 0 1 0 0 1 1 0 1 1 1 0 1 1 1 1 1 0 1 0 0 0 1 1 1 1 0 0 1 0 1 1 1 0 1 0 0 0 1 1 1 0 0 0 0 0 1 1 1 0 1 0 0 0 1 0 1 1 0 0 0 0 0 0 1 0 0 1 0 1 0 1 0 0 0 1 1 1 1 1 1 1 0 1 1 1 0 0 1 1 1 0 0 0 1 0 1 0 1 1 0 1 0 0 1 1 1 1 0 1 1 0 1 0 1 1 0 0 0 0 0 0 0 1 1 0 0 0 1 1 0 1 0 0 0 0 1 1 1 0 0 0 1 0 1 0 1 1 1 1 1 1 1 0 1 1 1 1 1 0 1 0 1 1 1 0 1 1 0 1 0 1 0 1 1 1 0 0 1 0 0 0 0 1 Deletion Peak 33 17q11.2 chr17:29326736-29794469(probes 1325238:1325429) chr17:29419706-29711410(probes 1325278:1325400) chr17:25929929-36922838(probes 1323807:1328668) 1.7643e-10 1.9241e-09 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 1 1 0 0 0 0 1 1 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 1 1 1 1 1 1 1 0 0 1 1 0 0 0 0 0 0 0 1 1 1 1 1 1 0 0 0 1 0 0 0 1 0 0 1 0 1 0 0 0 0 0 1 0 0 0 1 0 1 1 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 1 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 1 1 0 0 1 1 0 0 0 0 0 1 0 0 1 0 0 0 1 0 1 0 1 0 0 1 0 1 0 0 0 0 0 0 1 1 0 1 0 1 0 1 0 1 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 0 1 Deletion Peak 34 17q25.3 chr17:80536813-80617015(probes 1350517:1350550) chr17:80560495-80608148(probes 1350534:1350546) chr17:79909332-81195210(probes 1350345:1350713) 2.9727e-06 0.00025506 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 1 1 1 0 0 0 0 1 0 0 0 1 1 1 0 0 1 0 0 0 0 0 0 0 1 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 1 1 1 0 0 0 1 0 0 0 1 0 0 1 1 0 0 0 1 0 0 1 0 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 1 1 0 0 1 1 1 1 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 1 0 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 0 1 Deletion Peak 35 18p11.32 chr18:1-5145388(probes 1350714:1353122) chr18:366044-894241(probes 1350756:1350757) chr18:367120-894561(probes 1350757:1350758) 0.24876 0.25126 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 0 1 1 0 0 0 0 0 1 0 1 0 0 0 0 0 1 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 1 0 1 1 0 1 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 1 1 1 1 0 0 0 0 0 0 0 0 1 0 0 0 1 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 1 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 1 1 0 0 1 0 0 0 0 1 0 1 1 1 0 0 0 0 1 0 1 1 0 1 0 1 0 0 0 0 0 0 0 Deletion Peak 36 18q23 chr18:75573485-78077248(probes 1392308:1393114) chr18:76823009-78077248(probes 1392986:1393114) chr18:76606184-78077248(probes 1392838:1393114) 0.019407 0.018971 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 1 1 0 0 1 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 1 0 0 1 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 1 1 0 0 1 1 0 1 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0 1 0 1 0 0 1 1 1 0 0 0 0 0 0 1 1 0 0 0 1 1 1 0 0 0 1 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 1 1 0 0 0 1 0 0 1 0 0 0 1 0 0 1 0 0 0 0 1 0 1 0 0 0 0 1 0 0 1 1 0 1 1 1 1 1 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0 1 0 1 0 0 1 0 0 0 1 0 1 1 1 0 1 1 0 1 1 0 1 0 1 1 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 1 Deletion Peak 37 19p13.3 chr19:1-390340(probes 1393115:1393142) chr19:1-293345(probes 1393115:1393116) chr19:1-3281867(probes 1393115:1393813) 1.1654e-09 1.1559e-09 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 1 0 0 1 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 1 1 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 1 0 1 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 1 1 1 1 1 0 0 1 1 0 0 1 0 1 1 0 1 0 1 0 1 1 0 1 0 1 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0 1 1 0 0 0 1 0 1 0 0 1 0 0 0 1 1 1 0 1 0 1 0 0 0 0 1 0 0 1 0 0 0 1 1 1 0 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 Deletion Peak 38 19q13.43 chr19:58264000-59128983(probes 1416505:1416803) chr19:58593258-58632767(probes 1416632:1416658) chr19:44220482-59128983(probes 1410711:1416803) 6.413e-12 6.4723e-12 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 0 1 0 1 1 0 1 0 1 0 0 1 1 1 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 0 1 0 1 1 1 0 1 1 0 0 0 0 1 1 0 1 1 1 0 1 0 1 0 1 1 1 1 1 1 0 0 0 0 1 0 0 0 1 1 1 1 1 0 1 0 1 0 0 0 0 1 0 1 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 1 0 1 0 0 1 0 1 1 1 1 1 0 0 0 1 0 1 1 0 0 1 1 0 0 1 0 0 0 0 1 0 0 0 1 1 0 1 0 0 0 1 0 0 1 0 1 0 1 0 1 0 1 1 1 0 0 1 0 0 0 0 0 0 1 1 0 0 0 1 1 1 1 1 0 1 0 0 1 0 1 0 0 0 1 0 1 1 1 1 1 0 0 1 1 0 0 1 1 1 0 0 0 0 0 0 1 0 0 1 1 1 0 1 1 0 1 1 0 0 0 0 0 0 0 1 Deletion Peak 39 21q11.2 chr21:1-23095995(probes 1453817:1458731) chr21:16322960-16440961(probes 1454428:1454511) chr21:16152747-16809692(probes 1454333:1454801) 0.11643 0.19392 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 1 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 1 1 1 1 0 1 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 0 1 1 0 1 0 0 0 1 1 0 1 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 Deletion Peak 40 21q22.3 chr21:47427840-48129895(probes 1474113:1474213) chr21:47572498-47609222(probes 1474157:1474167) chr21:46647106-48129895(probes 1473898:1474213) 0.00082565 0.0034746 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 1 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 1 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 1 0 1 1 0 0 0 0 1 0 1 0 0 1 1 0 0 0 1 0 0 1 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 1 0 1 0 0 0 1 1 1 0 0 1 0 1 0 0 1 0 0 0 1 1 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 1 0 0 1 1 1 1 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 0 Deletion Peak 41 22q13.32 chr22:45095899-51304566(probes 1488003:1490951) chr22:49174995-49176650(probes 1490876:1490877) chr22:47227322-51304566(probes 1489292:1490951) 0.016841 0.016841 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 1 0 0 0 1 0 0 1 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 1 0 0 1 1 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 1 1 1 1 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 1 0 1 0 1 0 1 0 0 0 1 0 0 1 0 0 1 1 1 0 0 0 1 1 0 1 0 0 1 1 0 1 0 1 0 1 0 1 0 0 1 1 1 0 1 1 1 1 1 1 0 0 0 0 0 1 1 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 1 1 0 0 1 0 0 1 0 0 1 1 0 1 0 0 0 0 0 1 0 0 0 0 0 1 1 0 1 1 0 1 0 0 0 0 0 0 0 0 0 1 0 Deletion Peak 42 Xp21.1 chrX:30870233-34644819(probes 1503276:1504497) chrX:30870233-34033668(probes 1503276:1504495) chrX:32057483-32062301(probes 1503886:1503887) 0.014424 0.014448 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 0 0 0 0 1 0 1 0 1 1 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 1 0 0 1 0 0 0 1 1 1 1 1 1 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 1 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 1 0 0 0 1 0 1 0 0 0 1 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 1 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 Deletion Peak 43 Xq21.1 chrX:76710176-77102528(probes 1519404:1519434) chrX:76722851-77070309(probes 1519409:1519433) chrX:74316005-77102528(probes 1518949:1519434) 2.7116e-16 2.8782e-15 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 1 0 0 0 0 0 1 1 1 1 1 1 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 1 0 1 0 1 0 0 0 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 0 0 0 0 1 1 1 1 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 1 0 1 1 1 1 1 1 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 1 0 0 0 1 1 0 0 0 0 1 1 0 1 1 0 1 0 0 1 1 1 0 1 1 0 0 1 1 1 0 1 1 0 1 1 0 0 1 0 0 1 0 1 1 0 1 1 0 1 1 0 0 0 1 0 0 0 1 0 1 0 0 0 1 1 0 0 0 0 1 0 0 0 1 1 0 1 0 1 0 0 1 0 1 0 1 0 0 0 1 0 0 0 0 1 1 0 0 0 1 0 1 1 1 1 0 0 1 0 1 1 0 1 1 0 1 1 0 1 1 0 1 1 1 0 1 0 0 0 0 0 Deletion Peak 44 Xq22.3 chrX:107382193-108617052(probes 1532015:1532567) chrX:107870837-108023686(probes 1532262:1532263) chrX:107469691-108033166(probes 1532074:1532265) 0.0065312 0.041133 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 0 1 0 0 0 0 0 0 1 0 1 1 1 1 0 1 0 0 0 1 1 0 1 0 1 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 1 1 1 0 0 0 0 0 1 1 0 1 1 1 1 1 0 1 0 1 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 1 1 1 0 0 1 1 0 0 0 0 1 1 0 0 0 0 0 1 0 1 1 1 1 1 1 0 1 0 1 1 0 0 1 1 0 1 0 1 0 0 1 0 1 0 1 0 1 1 0 0 1 1 0 0 0 0 1 0 0 0 0 1 1 0 0 1 1 0 1 1 1 0 1 1 1 1 0 0 0 1 1 1 0 1 1 0 1 1 0 1 1 0 0 1 0 1 1 0 0 1 1 0 1 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 0 1 1 0 1 0 0 1 0 0 0 0 1 0 1 0 0 0 1 0 1 0 0 1 0 0 0 0 1 0 1 1 1 1 0 0 1 0 1 1 0 1 1 0 1 1 1 1 1 0 1 1 1 0 1 1 0 0 0 0 Amplification Peak 1 - CN values 1p32.1 chr1:58847071-59952427(probes 30063:30884) chr1:59233991-59252053(probes 30369:30380) chr1:57381136-61434117(probes 28853:31809) 3.4253e-12 3.4253e-12 Actual Copy Change Given -0.094649 -0.0010163 3.6569 0.014356 0.031014 0.0048579 -0.0017311 0.41295 -0.0056757 0.0056919 0.029614 -0.01037 0 0.0012481 0.017264 0.63385 0.10103 0.77733 0.0030522 -0.028901 -0.22408 -0.044144 0.061079 1.4172 0 0.0030799 0.00055459 0.0029133 0.024268 0.51412 3.6569 3.6569 0.96432 0.0070298 0.0086135 3.6569 0.10155 0.0017647 0.0056919 0.075128 0.34421 3.6569 0.049824 0.044857 0 0.000893 0.020971 -0.00024052 0.48561 0.0041764 0.185 -0.42903 0.00083195 0 0.0043021 0.0041281 -0.37504 0.0066653 0.17815 0.14935 0.020834 0.031014 0.057368 0.12314 0.032422 0.03637 0.040751 0.82216 -0.83284 0.12049 1.3559 3.6569 3.6569 3.6569 0.0065262 -0.035448 0.11756 0.097252 -0.58058 -0.89266 0.47255 0.7637 0.60034 -0.084046 -0.010393 0.01171 3.6569 -0.092213 0.021463 0.049966 0.021043 0.0036076 0.00069327 0 0.0022193 0.67363 0.12476 0 0.44443 0.69821 0.85011 -0.52072 0.072396 0.12074 0.49701 0.0027745 0.39496 0.037292 0.71999 0.28533 -0.014584 0.60106 0.2966 0.50985 0.056228 0.018103 -0.013953 0.0086135 0.00027728 3.6569 0.88386 -0.041702 -0.00090061 0.51839 -0.35353 0.60592 1.2712 0.32479 0.019003 0.026204 0.060079 3.6569 0.0114 3.6569 0 -0.0020784 0.12918 0.020203 0.0049969 -0.77324 0.15801 -0.79586 0.026092 -0.0062286 0.34496 -0.041567 3.2876 0.63007 0.06934 -0.0053992 -0.31026 0.52731 1.5729 0.55594 0.019223 0.13554 0.022725 0.0095883 -0.37211 0.78833 -0.012851 -0.019863 0.029495 -0.56753 -0.80435 -0.43572 -0.87276 -0.054883 0.048262 0.068717 0.63774 0.055658 -0.0034627 0.00041593 0.16914 -0.95134 0.11282 0.4553 0.10424 0.74252 0.0079175 0.59512 0.68449 1.5179 0.12336 0.76868 0.02619 0.017404 0.4536 0.041458 0.0040243 0.0077783 0.0016642 0.0015255 -0.56992 1.0042 0.012324 0 0.18556 0.0052749 0.071822 0.030872 -0.0030475 0.10874 0.028622 0 0.093719 -0.0096806 0.55283 0.20129 0.078871 -0.5431 0.001803 0 0.0016642 0.095508 -0.0033243 0 0.5352 0.30841 0.42983 0.13495 0.18404 -0.59973 0.99239 -0.95294 0.0092711 -0.10297 0.15502 0.26846 0.048036 3.6569 0.0012481 -0.10132 -0.87465 0.16805 -0.0080244 0.43429 0.08739 0.035806 0.31251 0.014297 0.037149 2.9355 -0.0087745 0.055943 -0.059269 0.91784 0.024265 0.50741 0.0065262 -0.42783 0.0011093 0 0 0 0.47942 Amplification Peak 2 - CN values 1q21.3 chr1:149881399-154019796(probes 67523:69421) chr1:153106296-153134086(probes 68986:69001) chr1:120527362-176736461(probes 67522:83775) 4.3422e-08 0.033553 Actual Copy Change Given 0.88657 -0.0010163 0.15385 2.5159 0.72848 0.0048579 -0.036495 0.36657 0.0038854 0.0056919 0.029614 0.43581 0 0.0012481 0.015168 0.54365 0.10103 0.35463 -0.055095 -0.028901 -0.13949 2.8333 -0.18068 -0.47702 0 1.2825 0.00055459 0.0029133 0.024268 0.0013956 0.010646 0.00055459 -0.071338 0.0070298 0.0044411 0.0083351 0.027778 0.0017647 0.0056919 0.075128 0.34421 0 0.049824 -0.37414 0 0.77299 0.020971 1.7053 1.2357 0.0041764 0.185 0.63426 0.00083195 0.0043021 1.2286 0.0041281 0.26106 0.012516 0.17815 0.044152 2.0882 0.90472 0.057368 0.12314 0.0087184 0.03637 0.031353 0.78987 0.0063871 -0.35521 0.029325 -0.0017418 -0.19937 0.0082034 0.0065262 -0.035448 0.047694 0.074265 1.3655 0.87209 0.47255 1.5181 0.52136 -0.031137 -0.021632 0.020755 -0.20406 3.6569 0.019954 0.0015255 0.021043 0.0036076 0.00069327 0 0.0022193 -0.13342 0.741 -0.33227 0.96548 0.36625 1.2653 0.096234 0.040044 0.21693 0.019643 0.58991 1.073 0.037292 0.71999 0.39645 -0.014584 -0.021373 0.61299 -0.050717 0.031295 0.0054139 0.0015255 -0.007472 0.00027728 0.76086 -0.085324 0.28422 -0.0034627 0.094166 0.35363 0.64506 3.6569 0.32479 0.019003 0.026204 0.18223 0.00041593 0.52293 3.6569 0 -0.0020784 0.41915 0.0060306 0.0049969 0.035524 0.15801 0.12727 0.026092 0.93793 0.34551 0.019223 -0.14849 0.54717 0.06934 0.76408 0.7145 1.7035 0.87567 0.58596 0.78389 0.66106 0.022725 0.0095883 0.2508 0.063795 0.45984 -0.00097017 0.86219 0.1114 0.018383 0.018523 0.016146 0.33141 0.78962 0.99571 0.50602 0.011879 0.021463 0.00041593 0.89411 0.89507 -0.029175 0.68887 0.5345 0.62315 0.78871 0.59512 0.25777 1.3265 0.12336 0.19954 0.02619 0.017404 1.4174 0.027638 -0.0015067 0.020748 0.0016642 0.0015255 0.016845 0.60178 0.012324 0 0.003191 0.5338 0.071822 0.030872 0.83255 0.10874 0.67567 0 0.093719 -0.017391 0.073258 0.46477 0.078871 0.044592 0.001803 0 0.0016642 0.095508 -0.0033243 -0.52205 1.0222 2.1116 0.32624 0.50481 0.15816 0.53302 0.99239 0.026514 0.0092711 0.48879 0.098997 0.18064 0.052241 -0.048342 0.0012481 0.31209 0.005935 0.17875 -0.016755 1.2549 0.65295 0.035806 -0.14847 0.014297 0.85284 0.39961 -0.0087745 0.84731 -0.059269 0.91784 0.024265 0.017404 0.0063871 0.092895 0.0011093 0 0 0 -0.50235 Amplification Peak 3 - CN values 1q24.3 chr1:172019584-172206659(probes 81309:81426) chr1:172102228-172119581(probes 81350:81355) chr1:120527362-176736461(probes 67522:83775) 2.4164e-21 4.3614e-18 Actual Copy Change Given 1.8824 -0.0010163 0.15385 -0.49068 0.72848 0.0048579 -0.0059522 0.36657 0.0038854 0.0056919 0.029614 0.43581 0.01433 0.0012481 0.015168 0.0209 0.10103 0.44748 3.6569 -0.028901 -0.13949 3.6569 -0.18068 1.5028 0 3.6569 3.6569 0.0029133 0.024268 0.0013956 3.6569 0.00055459 -0.071338 0.0070298 3.6569 0.0083351 3.6569 0.0017647 0.0056919 0.075128 0.34421 0 0.049824 0.00097064 0 0.40902 -0.55787 3.6569 1.2357 -0.0060671 0.185 0.027357 0.00083195 0.0043021 1.2286 0.0041281 0.26106 0.012516 0.17815 0.044152 3.6569 0.90472 0.057368 0.12314 0.01419 0.029141 0.031353 0.76312 0.0063871 -0.35521 0.029325 -0.0017418 3.6569 3.6569 3.6569 -0.035448 0.62042 0.62351 0.48561 0.041883 0.47255 -0.043331 -0.47289 -0.031137 -0.021632 0.020755 -0.20406 3.6569 0.019954 0.0015255 0.021043 0.0014177 0.00069327 0 0.0022193 -0.13342 0.741 -0.31385 0.9302 0.36625 1.2703 0.13598 0.040044 0.21693 0.053997 2.2542 0.86712 0.017963 0.71999 0.69652 -0.014584 -0.021373 -0.45608 -0.050717 0.031295 0.0054139 0.0090312 -0.007472 0.00027728 0.94221 -0.13165 0.28422 1.5414 0.094166 -0.76193 -0.053746 -0.10342 -0.075211 0.039761 0.026204 0.26435 0.00041593 -0.0023553 0.032563 0 -0.0020784 3.6569 0.0060306 0.0056919 0.035524 0.15801 0.12727 0.090575 0.93793 0.34551 0.8697 -0.11365 0.54717 0.12211 -0.0078863 0.7145 1.7035 2.2628 0.58596 0.78389 0.66106 0.022725 0.0095883 0.33381 1.354 0.48192 -0.00097017 0.011335 0.1114 0.018383 0.018523 0.016146 0.093766 0.91016 0.031168 0.50602 0.011879 0.021463 0.00041593 0.89411 0.89507 -0.029175 0.68887 0.5345 0.59584 0.0065262 -0.42898 -0.1827 -0.032041 0.12336 0.19954 0.02619 0.010344 1.5154 0.027638 -0.0015067 0.021744 0.0016642 0.0015255 0.016845 0.60178 0.012324 -0.018499 0.003191 0.5338 0.071822 0.030872 -0.066335 0.29565 0.029325 0 0.093719 -0.017391 -0.35852 0.91431 0.078871 0.044592 0.001803 0 0.0016642 0.14444 -0.0033243 -0.52205 1.0222 3.6569 0.32624 0.1103 -0.29603 0.55691 0.91723 0.026514 0.0092711 0.78474 0.65332 -0.15936 0.38982 3.1683 0.0012481 0.31209 0.005935 0.17875 0.0081959 0.49995 0.65295 0.038206 -0.14451 0.014297 0.85284 0.39961 -0.0087745 1.7213 -0.059269 0.91784 0.023987 3.4264 -0.0008316 0.18828 0.0011093 0 0 -0.051934 -0.50235 Amplification Peak 4 - CN values 2p11.2 chr2:82640170-97591130(probes 175954:179301) chr2:85516072-85580224(probes 177571:177608) chr2:85461013-85668972(probes 177520:177641) 0.15096 0.15096 Actual Copy Change Given -0.43858 0 -0.011862 -0.005261 -0.005814 0.0029133 0.034959 -0.02384 0.0076392 0.57773 0.032889 0.10191 1.2047 0.0055529 -0.019702 -0.61606 0.10089 0.092605 0.10024 0.33772 -0.57259 -0.027119 0.065083 0.59926 -0.028901 0.026935 0.00027728 -0.0015243 0.16865 0.020352 0.015131 -0.0011087 0.1882 0 0.00069327 -0.011198 0.015587 0.011261 0.0051359 -0.0022168 0.32109 0.0040243 -0.040924 0 0.080456 0.14361 -0.0023553 0.0022193 0.31081 -0.0037913 -0.73824 0.00083195 -0.0031009 2.3229 -0.36714 0.041034 1.2003 0 0.3692 0.11477 0.018034 0 -0.77192 -0.83446 -0.0056757 -0.64358 0.0066053 -0.46334 0.019083 0.98866 -0.0042057 0.003191 0.021463 0.0055529 0.024127 0.036794 -0.37855 -0.42865 0.54171 -0.35931 0.61861 1.4267 -0.44361 1.7274 -0.17818 -0.00038522 0.31819 0.12358 -0.019177 -0.48617 -0.85895 -0.0047079 0 -0.00027724 0.00054224 -0.12564 1.0266 -0.3084 0.25574 0.12285 0.38389 -0.51733 0.1682 -0.50311 -0.06786 -0.01354 -0.048207 0.0063871 -0.5792 -0.13936 0.01098 0.93386 -0.16264 -0.045135 -0.26649 -0.0008316 0.026092 -0.010698 0.0044411 0.45479 0.76255 0.24751 0.001803 -0.71319 -0.21244 0.48372 2.337 0.68291 0.037359 0.025221 -0.54703 0.040892 0.4977 0.10599 0.0034927 -0.0037395 0.5142 -0.01849 0 -0.069198 -0.33399 0.046417 -0.0060904 0.0026357 -0.20311 0.071822 0.35398 1.2818 -0.76975 0.019783 -0.39208 -0.026441 -0.81129 -0.54734 -0.020138 0 0.24404 -0.0066755 -0.33987 1.6148 -0.46802 0.17679 0.0043309 0.09246 -0.0095108 0.464 0.0114 0.38221 0.73758 0.0043021 -0.091675 -0.013953 -0.056883 -0.0023553 -0.40083 -0.00097017 -0.05168 -0.095516 -0.13484 0.51734 0.83116 0.022164 0.2287 -0.0069195 -0.48869 0.038065 -0.0030475 -0.0031859 0.44477 -0.0696 -0.010646 0.0020805 0 0 0.48561 -0.40815 -0.0050364 0.53274 0.022725 0.00069327 1.1778 -0.11391 -0.07401 -0.12694 -0.31494 -0.0014597 -0.33664 0 -0.0012473 0.058216 -0.010922 0.55001 0.0058309 0.019503 0.00013863 -0.73854 0.0076392 -0.13833 -0.32321 0.29199 -0.15559 -0.010508 0.10614 -0.051568 -0.2233 0.0051359 -0.0060904 0.50593 0.53274 0 -0.11221 0.011958 0.0044411 0.33885 -0.0050192 -0.28239 -0.92941 0 -0.54542 -0.026441 0.3499 0.0013868 -0.91935 -0.38549 0 -0.46249 0 0.57326 -0.0054175 0.53503 -0.0045695 0.073115 0.0114 0.0055529 -0.00097017 0.66009 0.40661 Amplification Peak 5 - CN values 3p12.1 chr3:86917447-87350419(probes 308385:308616) chr3:86946757-87113137(probes 308395:308483) chr3:85169204-93740691(probes 307615:310032) 3.7048e-09 3.7048e-09 Actual Copy Change Given 0.040548 0.0053676 0.10354 -0.030404 -0.0024938 -0.006505 1.1407 -0.039937 0.0017263 0.0012481 -0.062495 0.82627 0.021603 0 0 0.51333 0.045141 0.42869 -0.054825 0.52678 -0.58039 -0.78782 0 -0.49642 0.0049129 -0.40291 -0.0013858 0 0.29469 0.0038942 0.0080199 -0.0044312 0.17603 0.0051359 0.017684 0.024268 -0.0083005 -0.0016629 -0.0034627 2.5996 0.39911 -0.014916 0.0037465 -0.020685 -0.18131 -0.23552 -0.0023553 -0.012576 0.56507 0.41038 0 0.075559 -0.0092666 0.00027728 0.0034687 0.0017308 0.31482 -0.0053992 -0.0031859 -0.099885 -0.0068497 0.017963 0.049638 1.0147 -0.0078863 0.026092 0 -0.45351 0.0016642 0 0.012795 0.00013863 0.0019418 -0.039937 -0.036616 3.6569 -0.40385 0.046417 0.61244 0.048425 -0.35446 -0.028986 0.096816 0.37753 0.026069 0 0.51141 0.013712 -0.018078 0.03031 0.048262 -0.71657 -0.00013862 0.00083195 -0.0027707 0.26702 0.14935 3.6569 0.09638 -0.13083 3.6569 0.62097 0.43092 0.073158 0.72338 0.037641 0.3688 0.18192 0.39795 0.052019 -0.01753 -0.51414 0.52906 0.58793 0.027357 3.6569 0.0044411 0.013911 0.0043021 3.6569 0.52083 0.053948 0.0012481 0.043299 2.0039 0.84652 3.6569 0.23814 0.0025774 3.6569 -0.12694 -0.038034 3.6569 -0.16967 -2.5848e-05 -0.96402 0.028763 0 -0.63718 0.036512 0.46588 0.0075 -0.0024938 0.00027728 0.1898 0.016286 -0.62617 0.038771 -0.063032 0 0.059366 0 -0.019375 0.57791 -0.014014 0.69372 1.3624 0.001803 -0.33814 0.0088679 0.10424 0.14503 -0.028053 0.064797 0.0041632 0 0.0040243 0 0.046417 -0.05752 -1.0863 0 0 0.00027728 0.076405 0.016146 -0.066638 0.20106 -0.050641 0.55512 0.015587 0.36149 0.25918 0.011958 -0.042924 0.047978 -0.062898 0 0.017264 -0.04211 0.90351 0.0015255 0.0011093 0.0024969 -0.57368 -0.0008316 -0.0072477 -0.12779 3.6569 -0.00041585 0.077775 0.29596 0.92756 0.12933 -0.018765 0.0016642 3.6569 -0.016154 -0.36465 -0.027733 -0.017941 -0.54774 0.00097064 -0.033382 0 0.061508 -0.0018014 -0.51846 -0.66679 -0.14219 0.17754 0.099479 -0.039122 -0.64893 0.12049 0.029606 -0.021461 2.7957 0.76753 2.6194 3.6569 0.01447 -0.00055444 0.26125 -0.89214 0.016414 0.016705 0.39054 0.72074 -0.00041585 0.39994 -0.0048461 0.017124 1.0902 0.067313 -0.53348 -0.015054 -0.15311 -0.0032425 0.64488 -0.99186 0.19862 0.014682 0.0011093 0.00069327 -0.051621 0.057763 Amplification Peak 6 - CN values 4q12 chr4:48068784-58112347(probes 393286:396710) chr4:53620096-53649677(probes 393778:393790) chr4:53620096-53656692(probes 393778:393793) 0.13735 0.13735 Actual Copy Change Given 0.041114 0.0017568 0.03132 0.013074 -0.035993 0.0038854 0.67307 1.0007 -0.071071 0.0048579 -0.030813 0.41396 -0.013127 0.010788 -0.082535 0.657 0.11448 3.6569 -0.028081 0 0.18137 0.70776 -0.0048461 0.18722 0.65038 0.017824 -0.0023553 -0.002142 0.11829 8.7972e-06 0.0067677 -0.013127 0 -0.01106 -0.0016629 -0.86767 -0.030813 -0.0027707 -0.0029091 -0.024661 -0.22932 0.00028493 -0.054151 0.14697 0.035806 0.11059 -0.0095426 -0.0038779 0.53837 -0.020052 -0.09757 -0.7777 0.0026357 -0.0081252 -0.38381 0.0044411 0.093475 0.013074 0.62879 -0.74124 -0.044076 -0.015102 -0.79277 -0.821 -0.0066432 0.00083195 0.0086135 2.0105 0.00055459 0.10921 -0.026013 -0.0012473 0.078871 0.058367 -0.0070576 0.046417 -0.47046 0.11462 0.52888 0.069239 2.4076 0.73248 -0.44394 0.53637 0.20241 -0.028471 -0.97317 0 -0.024251 0.0033299 0.023005 0.010285 0.0037465 -0.0014804 0.55124 0.36117 0.37775 0.2565 3.5918 0.27222 1.0168 0.51141 -0.71737 0.21816 -0.055769 0.015727 0.44105 -0.057385 0.29692 0.15831 0 -0.30157 -0.25842 0.611 0.13835 -0.0066432 0.0052749 0.0005042 0.0011093 -0.58579 0.33745 0.33173 -0.0073339 0.076854 -0.065596 0.90553 -0.56216 -0.23673 -0.017941 0.0035786 0 0.010006 -0.00097017 -0.016979 -1.6845e-05 0.023987 0.031859 -0.016841 -0.018353 0.030137 0.059937 0.030873 0 0 0.0013077 0.030451 0.46075 -0.53531 0 0.0083351 -0.33871 0.22524 -0.033269 -0.021063 -0.86161 -0.026304 2.2009 -0.13884 0.27206 0.010424 -0.45147 -0.094196 -0.025865 0.15338 -0.0095426 1.1158 -0.013127 -0.53012 0.09101 -0.023429 0.0081959 -0.012382 0.0063411 -0.0023553 -0.8139 -0.0023553 0 0.19786 0.44426 0.034254 0.0034687 0.42805 0.26075 0.29294 0 0.0063871 0.20396 -0.0091286 0.33302 0 0.97241 -0.0038779 -0.00013862 -0.00027724 0.54083 -0.0053992 -0.0080762 0.47753 3.6385 -0.0023262 0.10534 -0.010509 0.030044 0.1382 -0.69658 -0.0013838 -0.1526 0.88546 0.4863 0.012732 0.037782 0.64158 0.010703 -0.03286 0.0023581 -0.74107 0.00039152 0.23783 0.55708 -0.063188 -0.19887 0.40028 0.092549 -0.05037 0.7467 0.023566 0.20412 1.1369 0.72886 0.28265 0.18147 0.0086135 -0.00013862 0.50533 0 0.0068044 0.027497 0.35953 0.64873 -0.031223 0.26695 -0.0018014 -0.0048461 0.018943 0.060017 0.52801 -0.39163 -0.5849 -0.021098 0.0033299 0.0043236 -0.036946 -0.071739 0.010285 -0.00013862 0.6799 0.56152 Amplification Peak 7 - CN values 5p15.33 chr5:1019815-1300024(probes 467478:467485) chr5:1020355-1288693(probes 467479:467483) chr5:1-4510919(probes 467429:469685) 1.4189e-05 1.4189e-05 Actual Copy Change Given 0.9834 0.0027283 0.41098 3.6569 0.0049969 0.75261 0.66493 0.7042 0.46707 -0.0051227 0.0037465 0 0.40928 -0.00027724 -0.93637 0.60647 0.11038 0.14607 0.5029 3.3599 0.34599 -0.0123 0.31402 0.17091 0.72452 2.4698 3.0683 0.0027745 -0.15144 0.00014743 0.012479 -0.0010665 0.24397 -0.080408 -0.0026322 3.6569 0.82157 -0.0012473 0.0024969 2.1253 -0.5317 -0.010646 0.0050542 1.4061 -0.32623 0.60999 0.0075 0.0467 0.64598 0.41356 1.7922 -0.31006 0.018523 0.011958 0.76983 0.0013969 0.67734 0.037641 0.020483 0.15084 0.034184 0.013632 0.16385 0.13007 0.0072217 0.029184 -0.0066432 0.17618 0.00069327 0.12686 -0.018628 0.00033222 0.036088 0.39579 -0.0030475 0.49424 -1.0304 1.3461 0.58381 0.068522 0.1388 -0.078311 0.12064 0.36635 -0.020573 -0.02285 0.78813 3.6569 0.13524 0.041175 1.4945 0.0033299 0.0029133 -0.0020784 0.00041593 0.23969 -0.31178 0.32945 -0.38683 2.1339 1.0549 0.081322 1.7479 0.38546 0.54841 0.0044102 1.0865 0.36084 0.47461 2.1849 1.3429 -0.062764 2.7374 0.36477 0.13376 0.80694 0.0055529 0 0 0.027028 0.22545 0.41697 -0.0011087 0.048546 1.3209 0.16768 -0.081073 0 -0.051645 -0.58001 0.26247 -0.28373 0.0028004 0.2641 0.0087528 -0.030813 1.4255 0.00041593 -0.56684 0.069525 1.3316 0.018803 -0.045906 -0.0027707 0.8412 0.046133 -0.073877 0.11155 -0.80741 0.01433 0.598 -0.016979 -0.010784 -0.59906 0.0020805 1.3145 1.779 0.037924 0.93936 -0.060883 0.45803 0.13288 0.84755 -0.60729 0 -0.035448 0 0.48613 0.076135 0.050677 0.53819 -0.0094046 0.40827 -0.0027707 1.4075 0 0.033408 -0.12797 -1.0007 0.45288 0.018383 0.077862 -0.16396 2.3808 0.51769 -0.067116 -0.023018 0.0054139 -0.47533 -0.77414 0.48906 -0.017803 0.0011093 -0.0011087 0.55407 1.6713 0.0028612 -0.043466 2.6583 0.00041593 0.075559 0.25746 0.2006 0.17196 -0.78395 0.00027728 1.5149 1.1499 -0.25406 -0.27254 -0.017116 0.62916 -0.015879 1.2896 -0.3956 0.79704 0.0013868 1.2709 0.10308 0.23535 -0.018628 0.20809 0.1744 0.59638 0.038913 -0.070402 0.43378 0.1882 -0.49361 -0.39585 0.10906 0.022024 0.0011093 0.33221 -0.0062633 0.44172 0.031577 -0.5896 0.71829 1.7446 1.2821 0.026935 0.041883 1.3113 -0.054614 0.73416 -0.64715 1.5717 -0.013264 0.18935 -0.0024631 0.21576 -0.0055375 -0.007472 0.00069327 0.14816 0.54065 Amplification Peak 8 - CN values 6p21.1 chr6:41687253-42194234(probes 592096:592368) chr6:42107036-42159255(probes 592312:592341) chr6:41700391-42199410(probes 592109:592370) 0.031491 0.031491 Actual Copy Change Given 0.273 -0.00018476 1.2617 0.03031 -0.012162 0.011818 0.5788 0.19193 -0.0027053 -0.012851 0.0052344 -0.46003 -0.82015 0.0063871 -0.0066432 -0.0047079 -0.25213 0.21945 -0.041567 0.55074 0.10016 0.00013863 -0.10959 0.040892 0.0055529 0.14102 -0.0029091 -0.0026322 0 0.0050057 -0.00072962 -0.0011975 2.9451 0.0037465 -0.0062286 0.0052953 0.0091705 -0.0018014 0.00055459 0.010842 -0.52358 3.6569 0 -0.35316 -0.83994 0.801 -0.0041546 -0.0069195 -0.09221 -0.013178 0.14302 -0.31867 -0.0034627 -0.90722 0 -0.086518 -0.7196 -0.8126 -0.28572 -0.19041 0.0014569 -0.92919 -0.23129 0.049682 -0.96157 -0.084783 -0.055229 0.19223 0.004719 -0.14587 -0.93607 0.0026357 -0.63972 0.00041593 3.6569 -0.11968 0.089854 0.064225 -0.11286 -0.023155 -0.3764 1.391 -0.46056 0.39456 -0.4063 -0.75208 0.35092 -0.62722 -0.0088526 -0.3078 0.02511 0.0068756 0.00027728 0.00010918 0.015866 0.25168 -0.017666 0.017386 -0.041567 -0.03095 0.33677 -0.013677 1.3774 0.036464 -0.0047079 0.0038854 0.33415 0 2.0934 0.15173 0.65626 0.065083 0.54841 0.080024 0.09101 -0.0053992 -0.0008316 -0.0062286 -3.1313e-05 -0.09578 0.036935 0.18919 -0.0073339 0.2686 -0.13408 -0.044009 -0.12551 -0.018216 -0.0047895 -0.57231 0.1625 0.014051 0 0.0012481 -2.9643e-05 0.019363 2.1954 -0.0085766 0.00041593 0.019503 0.074121 -0.789 0.029466 -0.00041585 0.18556 0.038771 3.6569 -0.56557 -0.7826 -0.01409 0.42435 0.13155 -0.010646 -0.6009 0.017724 -0.034768 0.60575 -0.0090584 1.463 -0.0087267 0.011818 -0.086495 -0.067296 0.1006 -0.00055444 3.6569 -0.03681 0.52328 -0.64085 -0.079077 0.52678 0.032281 -1.0019 -0.37977 0.035131 0.0026357 0.10795 0.19756 0.036088 0.035516 -0.93067 0.1676 0.14474 0.86433 -0.0083005 0.0375 -0.088507 0.010842 0.41329 -0.24667 -0.0053992 -0.0008316 -0.0040075 0.0027745 0 0.48475 0.0059177 -0.61614 0.79646 3.6569 0.088548 -0.099026 0 -0.14348 0.0085149 -0.00041585 0.48148 0.020483 0.0017123 3.4274 -0.33641 -0.56083 -0.013677 -0.035721 0.0011093 0.052383 0.031156 -0.48397 0.51403 1.1894 -0.080807 1.2074 -0.28549 -0.63358 0.53801 0.022024 -0.0020784 -0.10152 -0.51455 -0.15026 0.13806 -0.050235 -0.0053548 -0.62083 0.010668 0.0090271 -0.96088 1.2304 0.54683 0.011121 -0.23092 -0.012851 0.022024 0.022725 0.019582 0.38485 -0.15656 -0.17487 -0.75642 0.21177 0.0016977 0.22541 -0.016704 -0.23116 0.0011093 -0.035448 -0.54709 Amplification Peak 9 - CN values 6q25.1 chr6:148810209-149693136(probes 650611:651250) chr6:149085331-149141277(probes 650788:650841) chr6:132613799-153008574(probes 640640:653503) 5.3375e-09 5.3375e-09 Actual Copy Change Given 0.29399 0.0024013 0.077888 0.03031 0 0.011818 -0.61614 1.2187 0.003191 -0.6214 0.0062481 -0.47411 0.037027 0.019643 0.0094491 -0.047325 -0.25213 0.21945 -0.049664 0.60901 1.2398 0.02806 2.3614 0.058367 0.0055529 -0.034631 0.0034687 1.9812 -0.082801 3.6569 -0.00072962 -0.0011975 0.080601 3.6569 -0.0099565 0.0077783 0.0091705 1.1972 0.00055459 0.00083195 0.38849 2.7266 0.019923 0.56792 1.7539 -0.10796 3.6569 3.3195 -0.53602 -0.013178 0.15508 -0.30557 0.0013868 -0.0051227 0.017684 -0.016841 -0.24752 0.031155 0.02525 -0.17271 3.6569 -0.0060904 -0.23129 0.079447 -0.0018014 -0.073209 -0.021647 0.10804 0.006109 -0.57041 -0.005261 0.0026357 0.0098669 0.00041593 2.6596 0.17347 -0.38347 0.69297 1.0529 -0.89963 0.8693 1.5145 -0.41215 -0.40557 2.1727 0.00114 -0.197 -0.5292 -0.0088526 -0.3078 0.047836 0.0068756 0.00027728 0.0026357 2.9933 0.37775 0.00097064 -0.30182 -0.11613 0.36149 0.43162 0.39164 0.030591 0.28733 -0.43778 0.012378 0.16055 0 0.34112 0.058367 0.66984 0.069525 0.17001 0.057796 3.6569 3.6569 0.011958 -0.0062286 0.0034687 0.68701 -0.11168 -0.025346 0.3206 0.92878 -0.1033 -0.067324 -0.025732 0.0024969 -0.0073339 0.019473 0.31593 0.014051 0 0.01447 0.00097064 0.019363 0.027497 -0.0085766 3.6569 -0.0055375 -0.36621 -0.012765 -0.00013862 -0.00041585 0.18556 0.054945 -0.17714 0.69073 0.08739 0.0037465 -0.12862 -0.021784 -0.010646 -0.55226 0.017724 -0.035721 0.46383 0.011159 0.98142 0.60642 -0.45115 -0.030813 -0.062601 0.12064 0.0058309 -0.069198 -0.0013858 0.57023 0.09304 -0.16485 0.48064 -0.010094 -0.09644 -0.0016629 0.034285 0.0079175 0.17392 0.91743 -0.46897 0.033549 0.024408 0.2585 0.044857 1.3685 0.82384 -0.010784 0.33367 0.010842 0.44528 -0.2483 -0.59156 -0.0008316 -0.00027724 0.0027745 0 0 0.0059177 0.35023 0.78987 -0.0099565 -0.91477 -0.087182 3.6569 0.15726 0.023767 -0.00041585 -0.0056757 -0.013815 0.37792 1.6217 0.094056 -0.55377 -0.022374 -0.16396 0.0011093 -0.19162 0.039478 -0.010508 0.53151 -0.80675 -0.076945 0.076272 0.20748 0.51594 0.04741 0.020203 -0.0085437 0.25722 0.095154 -0.03148 0.016705 -0.55531 0.00597 0.31558 0.003886 0.44884 -0.93511 -0.50724 0.66937 0.011121 0.80519 -0.012851 0.011539 -0.35168 0.040922 -0.12642 0.19649 0.0871 -0.29319 0.21177 0.0016977 0.24093 -0.0018014 -0.23116 -0.0076101 -0.071945 -0.50422 Amplification Peak 10 - CN values 7q31.2 chr7:114122507-116100184(probes 720856:721937) chr7:115032762-115064633(probes 721323:721339) chr7:115032762-115166897(probes 721323:721406) 0.17838 0.17838 Actual Copy Change Given 0.19384 -0.0014607 0.09626 0.010285 -0.0069195 -0.78091 0.006109 0.15457 -0.0037395 -0.012119 -0.023566 0.39048 -0.81729 -0.0056757 -0.044822 -0.13801 0.045282 0 0.042024 -0.0024078 0.87029 0.683 0.10979 0.049114 0.45973 0.36182 -0.005261 -0.097891 0.030451 -0.0050966 -0.0012839 -0.0019399 0.16535 3.6569 -0.010094 0.034254 -0.0027922 0.00033702 -0.0099565 0.028622 0.37109 -0.00041585 0.006109 -0.24265 0.10921 -0.11045 0.0054716 -0.0012439 -0.55437 -0.018161 -0.093479 0.038489 -0.00051546 -0.0029091 -0.42615 0.011958 0.19634 -0.3923 0.0069435 0.11009 -0.021551 0.0069435 -0.23826 0.022585 -0.0013858 0.03863 -0.00027724 0.20106 -0.0011087 0.09333 0.87508 -0.0022168 -0.63803 -0.0060904 3.6569 0.063509 0.63098 1.2531 0.051245 0.039337 -0.34973 0.69036 0.65374 0.32425 0.65072 -0.004539 3.1057 0.674 -0.027398 0.12918 -0.89649 0.0063871 0.00069327 0.0051359 -0.005814 -0.15682 -0.12043 0.74744 -0.043341 0.26059 0.037345 -0.020961 0.025812 0.19172 -0.44264 0.65038 0.45513 0.69409 0.29772 0 0.66493 0.10366 2.331 -0.25298 0.10541 -0.005261 3.6569 -0.0033243 -0.00062587 0 -0.28667 -0.74933 0.29708 0.053521 1.0954 0.24513 1.5915 -0.19812 -0.01339 0.021014 0.22176 0.0056111 0.99094 0.011818 0.0040716 0.010424 0.034677 0.00013863 0.008892 1.0289 -0.34125 0.018943 -0.0013858 0.00055459 0.32866 -0.97644 0.55815 0.21653 0.032311 -0.0045695 0.12786 -0.076412 0.0040243 0 -0.019448 1.1815 0.29024 0 1.7069 -0.81326 -0.45939 -0.70514 -0.013649 0 0.0011093 0.33707 -0.03681 -0.52297 0.056085 0 0.39396 -0.007472 -0.056712 0.0024969 -0.4211 0.0020805 -0.019726 0.1437 0.023847 -0.15477 0.0072217 0.41312 0 -0.0084385 -0.0095426 0.032422 0.21714 -0.10033 -0.010508 0.02539 -0.067231 -0.0060904 0.00041593 0.00055459 0.5493 0.025009 -0.0011608 0.19984 0.016286 -0.0031859 0.09304 -0.28561 0.59872 0.14355 0.63283 0.00013863 0.012516 0.10614 -0.025346 3.6569 0.085799 0.61317 0.0048579 1.2592 -0.0027707 -0.8372 0.0034687 1.1273 -0.55216 0.0029133 0.37825 0.84159 -0.013953 -0.083997 -0.3471 0.017544 -0.011749 0.47383 -0.0088263 0.71699 -0.13005 0.19664 0.0015984 -0.1025 -0.0011436 -0.37008 0.017758 0.3875 -0.56316 -0.017116 -0.15937 0 -0.011461 0.67474 -0.034884 0.57469 0.016985 -1.19 0.0043021 0.34486 0.00083195 -0.059673 1.1102 0.0024969 0.00013863 -0.044415 0.013772 Amplification Peak 11 - CN values 8p11.22 chr8:37911089-38852966(probes 766202:766625) chr8:38382038-38428656(probes 766411:766435) chr8:38237935-38469302(probes 766334:766456) 0.16281 0.16281 Actual Copy Change Given 0.48416 -0.0024014 0.21886 -0.21119 0.019363 0.013074 -0.64921 -0.84563 0.17076 0.0051359 -0.018353 -0.018765 0.025952 0.015727 0.028341 0.61516 0.10562 2.3151 0.17362 0.5149 -0.2319 0.64451 0.64726 0.061222 -0.020824 -0.066386 -0.0024938 -0.026714 0.61009 -0.027663 -0.0022534 0.0043021 -0.48491 0.00097064 -0.0035737 -0.011335 0 -0.0059522 -0.0066095 3.4714 0.062508 -0.011954 -0.075745 -0.0034627 0.11624 0.38113 0 -0.0013858 -0.58078 0.41205 0.16376 -0.44964 -0.70926 0.0054139 0.038913 -0.0026322 0.18132 -0.83056 0.089851 0.060083 -0.0013158 0.023566 0.020623 -0.82399 0.011121 0.011818 0.0086135 0.56685 -0.0022168 0.12138 0.0073609 -0.01037 0.035018 0 0 -0.28703 0.11932 0.2559 0.87453 0.026795 0.45374 -0.078991 1.1758 1.8258 -0.0566 0.72109 0.38949 -0.59166 0.05281 0.2848 0.016006 -0.0026322 0.0012481 0.0011093 0.00055459 -0.18017 0.083776 1.1945 0.52976 0.1038 -0.51268 -0.038836 0.33335 0.45507 0.057939 0.010146 0.20717 -0.049695 0.33658 -0.51013 1.2725 0.022304 -0.34504 -0.55317 -0.33283 0 -0.0022168 0.0002197 -0.0011771 -1.0218 0.26812 3.6569 0.018803 -0.14352 2.226 0.89227 -0.75919 -0.068931 2.2353 -0.55989 0.20488 -0.018075 -0.013985 -0.0013858 0.0053396 0.006109 -1.1746 0.35283 -0.56823 -0.054016 -0.038986 0.023286 0.014051 0.0020805 0.020265 -0.99708 0.10979 -0.53541 -0.86939 0.0095883 0.016286 0.42755 0.00069327 0.58274 0.0055529 0.66678 0.82588 0.010703 0.21361 0.11213 0.63442 0.15159 -0.0041259 -0.60022 -0.0066432 0.34708 0.0013868 0.51664 0.062794 1.8233 0.2157 -0.041702 0.034228 -0.0056757 0.084529 -0.96071 -0.050641 0.19269 0.080601 0.53257 0.0095883 1.6568 0.26404 -0.07361 -0.50681 0.043299 0.0010876 0.010703 -0.481 0.028481 0.36432 0.68496 -0.00069303 -0.0012473 0.55549 0.42974 0.0034166 0.54171 0.8202 -0.0036794 -0.087181 -0.052127 -0.018553 0 0.032845 0 -0.024935 2.3669 -0.15669 -0.065776 0.029606 0.052257 0.00597 0.59566 -0.00069303 -0.83349 0.042449 0.27017 0.43934 -0.80277 1.2036 -0.4712 0.053237 -0.046448 0.80539 0.046984 0.44105 0.49812 0.072684 0.15309 0.013213 0.025531 0.0044411 -0.14142 -0.0070923 0.099724 0.032563 0.46115 0.60359 0.006109 -0.18647 0.0051359 0.05281 0.92716 0.061589 -0.47681 0.12668 -0.60332 0 0.69652 -0.0029091 0.22191 -0.0095426 0.0041632 -0.0033243 -0.048478 -0.52491 Amplification Peak 12 - CN values 8q24.21 chr8:54604081-146364022(probes 772689:825516) chr8:127694324-127923765(probes 814847:815011) chr8:127694324-127927968(probes 814847:815014) 0.18425 0.18425 Actual Copy Change Given -0.48506 0.00038859 -0.30754 -0.22108 0.72527 0.013074 0.027778 0.077574 0.17076 0.0051359 0.019923 0.41905 0.015866 0.015727 0.014051 0.59045 0.11638 1.0956 0.17362 -0.52624 -0.21602 1.8809 0.6753 0.069382 -0.021856 0.3395 -0.0024938 -0.026714 0.61009 -0.096564 -0.0022534 0.0043021 0.63828 0.0090312 0 0.010146 0 -0.0059522 -0.0040162 0.0049969 0.062508 -0.028491 -0.075745 -0.0034627 -0.40274 -0.24296 0.026373 -0.0013858 0.53902 0.41205 0.17338 1.1126 0.011679 0.0054139 0.038913 -0.0026322 0.18132 0.028341 0.089851 -0.17562 1.1631 0.039054 0.020623 0.68221 0.010052 0.011818 0.0075 0.50506 -0.0022168 1.005 0.0034687 -0.0012473 0.61154 0 0 0.033267 -0.39653 -0.09142 -0.005814 -0.89511 0.37611 0.59962 2.7542 -0.37035 0.076974 0.75963 -0.31377 -0.56435 -0.0071958 0.38833 0.016006 -0.0026322 0.0012481 0.0011093 0.0031734 0.04429 -0.41212 0.70586 1.4115 0.018243 0.44649 1.1521 -0.34122 0.15622 0.56365 0.010146 0.045141 -0.63727 0 -0.51815 1.3115 0.012934 -0.30676 0.83176 -0.27643 0 -0.0041546 -0.0012473 -0.0011771 0.90351 0.4657 0.3025 -0.00097017 0.069956 -0.57705 0.0026357 2.5694 0.050448 2.2853 0.060335 0.20488 -0.15265 -0.04726 0.017404 0.010285 0.013213 1.4803 0.35283 0.74956 0.04883 -0.051721 0.023286 0.014051 -0.0055142 0.020265 0.022585 -0.46802 0.11272 -0.14923 0.0095883 3.6569 1.7824 0.00069327 0.58274 0.0055529 0.66678 -0.26023 0.010703 -0.36612 0.018147 0.45387 0.15159 0.0059988 -0.61643 -0.0066432 -0.052666 -0.0055375 0.54557 0.062794 0.026654 0.59134 3.6569 0.034228 -0.0056757 0.062068 -0.0022168 -0.061017 -0.14464 0.9363 0.45939 0.0095883 0.51054 -0.198 -0.07361 0.80792 0.77849 -0.0832 0.010703 0.46041 0.023145 0.28279 0.68496 -0.00069303 -0.0012473 0.55549 0.45956 0.0034166 0.54066 0.023987 0.018243 -0.8875 -0.22502 0.014411 0 -0.70289 0 0.53573 -0.21379 0.39065 -0.63561 0.029606 0.05523 0.00597 -0.6464 -0.00069303 0.67845 0.042449 0.24809 0.51856 1.5975 0.16865 1.0502 0.053237 1.0568 0.77887 0.042874 0.44105 0.7506 0.49868 0.41364 0.026092 0.025531 -0.0016629 -0.14142 -0.0070923 0.099724 0.046133 0.47341 0.048546 -0.95014 0.38833 0.0051359 -0.0008316 0.060794 0.067169 -0.56435 0.41471 0.045991 0 -0.016128 -0.0029091 -0.76518 0.0012481 0.0041632 -0.0023498 -0.048478 0.52206 Amplification Peak 13 - CN values 11q22.2 chr11:101789694-102613189(probes 1029335:1029686) chr11:102263274-102538951(probes 1029434:1029631) chr11:101824125-102572827(probes 1029352:1029658) 0.038088 0.038088 Actual Copy Change Given 0.263 -0.0035088 0.034138 -0.20423 -0.00055444 0 -0.67034 -0.39842 0 -0.11129 -0.97495 -0.4476 -0.00069303 -0.4232 0.014051 -0.0077482 -0.2554 -0.53418 -0.3943 -0.58765 3.6569 -0.01904 -0.36163 -1.0444 3.6569 0.14503 -0.0072334 -0.0040162 -0.44577 3.6569 0 0.0055529 -0.0023553 3.6569 0.076998 -0.013127 -0.79894 3.6569 -0.0023553 0 0.44274 -0.0067096 -0.022857 -0.024114 0.6753 0.22722 -0.56707 0.0076392 0.0091705 -0.007938 -0.089776 0 0.0058309 0.0026357 -0.43594 -0.012576 0.084498 0.016815 0.65112 0.14548 0.26585 -0.0085766 0.045282 -0.85011 -0.95589 -0.0070576 0.022024 0.27395 -0.004629 -0.86664 -0.00013862 0.0023581 -0.6277 -0.0022168 -0.0066432 -0.29248 0.17678 -0.45019 -0.53317 0.058556 -0.3487 1.3667 0.67011 -0.40378 0.3079 0.016037 0.41881 -0.59698 0.030451 -0.34836 0.012795 -0.0071513 -0.0077482 -0.0072245 -0.0067813 -0.57457 0.42267 0.31416 0.46553 -0.38156 -0.023819 -0.60226 -0.29426 -0.047577 0.042024 -0.6691 -0.68924 -0.6237 -0.23643 -0.49996 -0.019178 0.080312 0.20549 0.012655 -0.76775 -0.69712 -0.013402 0.00013863 0.00027728 -0.58225 -0.070402 3.6569 0.0019418 -0.36721 -0.28217 1.6306 0.60106 -0.063032 -0.018529 -0.55949 -1.1484 -0.093271 -0.52818 -0.0092666 -0.74716 -0.0051227 -0.55937 0.0043021 1.2868 0.0022193 0.52906 0.034677 0.011958 -0.0038779 -0.16039 -0.94854 -0.62375 0.63353 -0.79886 -0.0055375 0.89006 -1.2288 -0.0072978 -0.56186 0.70907 -0.026931 -0.014503 0.0375 -0.36771 -0.81827 0.013074 -0.21293 0.006555 -0.044144 0.010006 -0.47438 0.013353 -0.54088 -0.26781 0.03128 -0.90753 0.016425 -0.037354 0.0010306 -0.43591 -0.962 -0.040345 -0.43745 -0.46366 -0.5427 -0.0089906 -0.64311 0.25386 -0.75296 -0.51548 -0.61633 -0.076545 0.0065262 -0.46451 0.066945 -0.020651 0.00083195 0 0.0012481 -0.57565 -0.059135 0.015534 -0.022606 -0.53449 -0.00027724 0.063939 0.96021 -0.072016 0.14846 -0.71408 -0.0030475 -0.072675 2.9619 0.014609 -0.032648 0.026892 -0.55511 0.053521 -0.020549 0.001803 0.15906 -0.005261 -0.11247 -0.51568 -0.26011 -0.012989 -0.61297 -0.30181 -1.1926 -0.11208 -0.33479 -0.0044514 -0.063508 -0.53429 -0.072815 -0.21923 0 -0.0012473 -0.60264 -0.0046043 -0.35407 -0.92294 -0.49996 -0.53865 -0.052126 -0.28156 0.0056919 0.04741 -0.44113 0.012874 -1.049 -0.43849 -0.60584 0.0019418 -0.43387 -0.0062331 -0.26877 -0.013932 -0.0012473 0.00083195 -0.023292 0.004719 Amplification Peak 14 - CN values 12q15 chr12:69178021-69244387(probes 1086811:1086878) chr12:69199363-69243712(probes 1086815:1086877) chr12:65724773-80166055(probes 1084416:1093456) 1.6311e-75 1.6311e-75 Actual Copy Change Given -0.10453 2.7991 3.6569 3.6569 0.0083351 -0.57457 0 3.6569 -0.0031859 -0.60547 0.07096 0.00062828 -0.010123 -0.65342 -0.0060131 -0.051542 -0.25104 3.6569 3.6569 3.6569 -0.014781 2.9478 3.6569 3.6569 3.6569 0.26101 3.6569 3.6569 3.6569 3.6569 0.0028767 3.6569 3.6569 3.6569 3.6569 3.6569 3.6569 3.6569 3.6569 3.6569 3.6569 3.6569 3.6569 3.6569 3.6569 0.17625 3.6569 3.6569 -0.051316 -0.0065567 0.071882 0.019783 -0.0029091 0.00027728 0.019223 -0.035331 -0.20734 -0.084793 -0.083542 -0.29047 3.6569 -0.0034627 -0.005261 -0.82472 0.0013025 -0.022332 0.023898 -0.43832 -0.010922 -0.46142 -0.00055444 3.6569 3.6569 3.6569 3.6569 0.043157 -0.40102 0.10235 -0.0026322 0.012934 0 -0.021784 0.63408 3.6569 0.16128 0.021775 -0.22515 3.6569 0.0079175 -0.52283 0.011261 0.0036076 0.00097064 0.0011093 3.6569 -0.14065 0.09667 0.35853 0.14191 -0.20199 0.43583 -0.10618 -0.28679 0.14027 0 0.0094491 -0.14374 0.0056919 -0.013127 -0.1572 0.65111 0.04883 0.48664 -0.26853 3.6569 3.6569 3.6569 1.8618 -0.0011087 -0.54209 -0.25249 -0.0031859 3.6569 -0.34201 0.84295 0.20381 -0.063301 -0.045228 0.017544 0.011789 3.6569 3.6569 3.6569 3.6569 0.00037872 0.003191 3.6569 -0.14005 3.6569 0.023145 0.13746 0.0086135 0.0040243 0.00041593 0 0.019427 3.6569 0.042732 -0.77956 -0.83446 0.50446 0.40827 -0.01849 -0.0033243 -0.8343 -0.011473 0.28929 -0.0083618 -0.37121 3.6569 -0.46653 -0.0066432 0.0050257 0.029325 0.0075 -0.049559 0.0026357 0.0095883 0.0049969 -0.83218 -0.43518 0.0026357 -0.03245 -0.0012473 -0.019238 -0.00013862 0.038347 -0.29213 -0.44954 -0.56276 0 -0.57239 0.67771 -0.0067813 0.023706 0.02614 0 -0.025346 -0.4342 0.040751 -0.45597 0.0043021 -0.0013858 0 0.5051 0.0016642 -0.011387 0.51596 0.088113 3.6569 -0.91402 -0.051857 0.18465 -0.17196 0.0041632 -0.0024938 -0.0055375 0.27614 0.27791 0.68618 -0.059404 0.03637 -0.01037 0.72659 -0.00097017 0.17317 -0.0047079 0.17414 -0.040177 3.6569 0.13509 0.77964 0.17257 1.013 -0.55015 0.020763 -0.0042929 0.52406 0.10628 -0.078263 0.037924 3.6569 0.001803 -0.60071 0.0026008 -0.35521 -0.92354 -0.047124 0 -0.92428 0.37743 -0.041567 -0.0078863 0.028622 -0.12114 -0.012024 0.28659 0.62061 0.0015255 0.35496 0.0023581 -0.29154 1.2536 0.0013868 0.00013863 1.3488 -0.083067 Amplification Peak 15 - CN values 13q34 chr13:113363456-114881111(probes 1179701:1180088) chr13:114012899-114047530(probes 1179921:1179932) chr13:111246760-115169878(probes 1178456:1180150) 1.1494e-05 1.1494e-05 Actual Copy Change Given 0.94355 -0.0048922 -0.27975 0.00458 0.0049969 -0.78707 1.0342 -0.079343 -0.23288 -0.63659 1.1014 -0.44599 -0.86871 -0.66012 0.012655 -0.60814 -0.256 -0.52215 -0.33503 -0.070001 -0.58882 -0.046854 -0.27887 -1.0689 -0.47522 -0.76638 -0.01037 -0.017666 0.52853 -0.010775 0.0013501 -0.00097017 -0.1881 -0.0083005 -0.0069195 0.029888 -0.91168 -0.0022168 -0.0036011 -0.38067 -0.2233 0.0030522 -0.017391 -0.80469 -0.82538 -0.29267 0.016006 0.004719 -0.10237 -0.0086283 1.1339 0.041458 -0.0036011 -0.93156 -0.86704 0.035383 -0.68924 0.030029 -0.62073 0.83825 0.50715 0.035383 -0.11024 0.043157 0.010564 0.031014 0.045566 2.5646 -0.0019399 -0.86566 1.3454 -0.011749 -0.28641 -0.03286 -0.005814 1.7009 -0.38862 1.2716 -1.2127 -0.88958 0.42284 1.411 -0.49584 -0.40677 -0.43747 0.06798 -0.20535 -0.0056757 0.068091 -0.53409 0.0058309 0.0020805 0.0024969 -0.00055444 -0.005814 -0.13846 0.47821 -0.32972 -0.41553 0.71942 -0.61551 0.58542 0.74689 -0.50456 -0.43127 0.019503 0.85878 -0.62455 -0.56773 1.7568 -0.016705 -0.051721 -1.0712 -0.90949 0.89969 -0.020824 0.0093098 -0.0042929 -0.0027707 0.89427 0.78029 -0.49913 0.00055459 0.56934 -0.57429 -0.25394 -0.82753 0.20901 -0.0458 0.044827 -0.53598 0.008853 -0.016429 -0.0069195 -0.25263 0.010285 0.019643 0.027497 0.028903 -0.48701 -0.92032 -0.83414 -0.85265 -0.0051267 -0.16967 0.058081 -1.2334 -0.56955 -0.76107 -0.83744 -0.31482 0.25371 0.0066653 0.017544 0.0020805 -0.0055299 -0.38772 -0.0027707 0.35626 -0.80211 0.030169 0.18677 -0.0064763 0.15786 -0.00030119 0.46365 -0.89435 -0.011611 -0.6123 0.63719 -0.58716 -0.28489 0.096816 0.00055459 -0.41232 0.06537 -0.03245 0.1901 0.88426 -0.19962 -0.049559 -0.29343 3.6569 0 0.42704 -0.72438 -0.16777 -0.01849 -0.47997 -0.3217 0.46212 -0.0055375 -0.0008316 0.0016642 -0.58696 0.43344 0.013161 0.58166 2.4872 -0.0080244 -0.89848 0.3592 -0.58608 -0.52215 1.3387 0.00027728 -0.3634 -0.31272 0.65314 -0.83716 0.088113 -1.1862 0 -0.01258 -0.027808 -0.24095 -0.0013858 0.50359 1.5286 -0.69224 -0.21664 1.937 -0.053341 0.0066653 2.5196 -0.12226 -0.018216 -0.091757 -0.88519 -0.13327 -0.037082 -0.58029 -0.0008316 -0.61575 -0.0091633 0.097252 -0.9343 1.3806 1.2174 -0.022881 3.6569 -0.03504 0.11008 -0.50484 0.079529 0.44167 -0.39519 -0.58853 0.97255 -0.14721 -0.0056757 0.34958 1.2682 0.00055459 -0.0020784 0.69503 -0.61355 Amplification Peak 16 - CN values 15q26.3 chr15:95392151-102531392(probes 1269549:1273516) chr15:101882381-102531392(probes 1273511:1273516) chr15:99538632-102531392(probes 1272431:1273516) 0.053277 0.053277 Actual Copy Change Given -0.10874 -0.00073915 3.3329 0.34193 0.030029 0.7181 0.50097 0.17679 -0.0098185 0.0054139 -0.15988 0.39098 0.015028 -0.69248 0.60106 0.0027745 0.26655 0.0033299 0.96247 0.48217 0.14295 -0.035448 0.0027745 0.80422 -0.020687 0 0.00055459 -0.012024 0.29421 -0.010775 -0.0046061 -0.010784 0.28485 0.016845 -0.00069303 0.67456 -0.043873 0.0073609 0.017124 -0.3078 -0.46419 -0.0123 -0.03245 0.01433 0.049966 -0.042728 0.026795 -0.00055444 2.4012 0.0070305 0.28825 -0.33814 -0.70814 0.58291 0.022024 0.0065262 1.0919 0.069525 -0.0078863 0.51124 -0.013057 0.080601 -0.024524 -0.11246 0.05153 0.013213 0.047694 -0.43916 0.0014507 1.0515 0.021603 0 -0.27129 0.0022193 0.0062481 0.035383 0.10541 0.3628 0.82566 0.38006 -0.43377 -0.073743 0.5727 0.30931 0.3129 0.060968 0.0090312 1.2418 0.019921 0.0068044 -0.0029091 -0.00069303 -0.0053992 0.00083195 0.012376 0.53925 -0.51702 -0.34413 -0.065716 3.0965 -0.14834 -0.55947 -0.0047079 0.20544 0.035947 0.013492 -0.025893 0.040892 -0.26637 -0.49392 1.3336 -0.66504 1.1087 -0.027808 0.23876 0.012516 -0.012851 0.0091705 -0.0034627 0.064368 0.27337 0.90714 0.0027745 -0.43235 0.16744 1.8678 0.38502 -0.40119 0.013492 -0.01632 0.17133 0 -0.26733 -0.13147 -0.0042929 -0.012162 -0.13871 0.026795 0.63499 0.20045 1.4649 -0.79911 0.025671 0.0030522 -0.09261 -0.028081 -0.66975 0.55425 0.14697 0.0065262 -0.059404 -0.0081624 -0.018628 -0.018216 0.027638 1.2793 0.70195 -0.051316 0.53713 -0.40915 0.44443 0.17211 0.0072506 0.30026 0.042307 0.55708 0.050819 -0.11221 -0.065447 -0.79921 0 0.72206 0.022585 0.0034687 0.51267 0.047126 0.015308 0.14132 -0.50058 0.37808 -0.012576 -0.24265 -0.67912 0.58714 0.068952 0.059651 0.037641 0.013591 1.0548 -0.38884 0.53538 0.00041593 0.0033299 -0.00069303 0.0097276 -0.96896 0.031806 0.56721 -0.55967 -0.0025354 0.99571 0.20228 0.099724 -0.52133 -0.72691 -0.00061678 0.19588 1.5059 -0.052656 0.5602 -0.22047 0.052099 -0.0019399 1.1674 0.0043021 0.99654 -0.0083005 0.25809 0.34909 0.24793 0.3327 -0.17284 0.1898 0.61299 1.1868 0.92209 0.0094491 0.1882 -0.51671 0.025687 -0.15234 -0.021098 -0.0049844 0.1848 0.024232 -0.31716 -0.0041546 -0.33906 1.2167 -0.93008 0.66697 0.016565 -0.91218 1.3343 0.058162 -0.055095 0.91339 -0.64631 0.046133 -0.22478 0.0049969 1.1747 0.010285 -0.012851 0.00083195 0.0041632 0.64653 Amplification Peak 17 - CN values 17p12 chr17:11702856-15565257(probes 1319747:1321382) chr17:12623417-12729127(probes 1320345:1320406) chr17:8070789-25274375(probes 1317314:1323542) 9.3248e-17 0.0035007 Actual Copy Change Given 0.23219 -0.0037855 0.49756 -0.18823 -0.74124 3.6569 3.6569 0.2631 -0.0080921 -0.62912 0.022746 0.41999 2.1164 0.59872 0.056798 -0.68332 0.73929 0.20763 -0.01106 0.44681 0 1.1784 -0.12148 0.0558 0.36756 0.55531 -0.0069195 0.0051359 -0.61316 -0.0048374 -0.008613 0.001803 0.3543 0.071678 -0.0023553 -0.051451 0.080024 0 0.00069628 -0.016841 -0.29508 -0.011749 0.010285 0.016705 -0.4448 0.17399 3.1791 0.0027745 -0.0094046 0.024496 -0.1077 -0.35453 -0.00013862 2.3404 0.008892 0.89568 0.47581 -0.0013858 3.6569 3.6569 0.54974 2.9024 0.068665 3.6569 0.054518 -0.091023 0.062365 0.81786 -0.011473 1.9458 -0.40152 0.0024969 0.053948 -0.00041585 0.0083351 0.25621 1.9041 0.0114 -0.090758 0.9146 0.037782 2.0128 -0.53865 -0.47589 -0.017827 -0.70012 -0.36079 -0.67214 0.98328 3.3243 -0.03245 -0.72941 -0.0044312 0.0063871 -0.027329 -0.10289 0.60016 -0.36795 0.18813 -0.78311 0.23894 0.49372 2.4952 -0.48579 -0.10381 -0.02384 1.147 -0.031632 -0.03286 0.22545 -0.044417 -0.58432 0.0049969 -0.33768 -0.023018 0.01447 -0.016875 -0.0080244 -0.010232 0.48354 0.76619 -0.10038 -0.0031128 0.13066 0.6675 0.39197 0.40694 0.054233 0.022444 -0.56019 -0.21515 -0.013677 0.85383 0.042695 -0.0076101 -0.028901 -0.019452 0.062651 -0.0091286 0.3894 1.8365 0.1649 -0.88787 -0.0026322 -0.20212 0.86871 0.34827 -0.02562 1.0058 0.87687 -0.43572 0.40744 0.078727 0.50602 0.84494 -0.044009 0.52415 -0.90366 0.82118 -0.013953 0.44477 3.6569 -0.85542 -0.56027 0.072253 -0.097627 0.049682 -0.53114 0.092025 0.037924 0.094032 0.25058 3.6569 0.013492 -0.47202 0.057939 0.065226 0.071391 0.46913 1.5588 0.75681 0.2338 0.68477 0.68999 1.524 -0.66281 0.050392 -0.82342 -0.3782 0.016146 0.00055459 0.0087528 0.00458 0 0.51037 1.1703 0.042537 -0.58677 1.497 0.030796 1.0009 3.6569 -0.22404 0.13761 0.6605 0.004719 0.12564 1.039 -0.09512 -0.14829 0.56601 -0.55249 -0.016017 -0.056307 0.013848 -0.78209 -0.0034627 0.17392 1.2141 -0.79978 0.16415 0.41412 0.18813 0.05694 0.44698 -0.8744 0.018123 0.96852 0.63098 0.069972 0.010842 -0.6264 -0.0051227 1.8632 0.026057 -0.28335 -0.9726 0.43226 0.39098 0.034959 1.1602 0.73492 0.053094 3.6092 3.6569 0.18556 0.76542 0.57398 1.1593 0.69989 0.0043021 0.15965 -0.028628 -0.016292 -0.0023553 0.041317 0.68887 Amplification Peak 18 - CN values 17p11.2 chr17:17727944-18792890(probes 1322324:1322697) chr17:18008593-18013802(probes 1322471:1322475) chr17:8070789-25274375(probes 1317314:1323542) 8.4923e-19 2.3424e-11 Actual Copy Change Given 0.23219 -0.0037855 0.071146 -0.18823 -0.74124 -0.10134 3.6569 0.2631 0.034417 -0.012995 0.022746 0.41999 2.1164 0.59872 -0.0047079 -0.68332 0.73929 0.20763 -0.01106 0.44681 0 1.1784 -0.12148 0.0558 -0.037218 0.55531 -0.0069195 0.0051359 -0.61316 -0.0048374 -0.008613 0.001803 0.3543 0.071678 -0.0023553 -0.051451 0.080024 0 0.00069628 -0.016841 -0.29508 -0.011749 0.010285 0.016705 -0.89756 0.30002 1.5313 0.0027745 -0.0094046 0.024496 -0.1077 -0.35453 -0.00013862 2.3404 0.008892 0.89568 0.47581 -0.0013858 3.6569 2.0086 0.021254 0.04812 0.068665 3.6569 0.054518 -0.091023 0.062365 1.7547 -0.011473 1.0544 1.8392 0.0024969 0.057796 -0.00041585 0.0083351 0.25449 1.9041 0.99945 -0.097232 0.6007 1.2252 2.0128 -0.53865 3.6569 -0.017827 0.096412 -0.36079 -0.67214 0.98328 1.4851 -0.03245 -0.01409 -0.0044312 -0.0011087 -0.016841 -0.10289 0.60016 -0.36795 0.55726 0.31386 1.6186 0.44816 2.4952 0.23902 -0.10381 -0.02384 1.147 -0.031632 -0.03286 0.22545 -0.044417 -0.58432 0.0049969 -0.33768 -0.023018 0.01447 -0.016875 -0.0080244 -0.010232 0.48354 1.6374 3.0058 -0.0031128 -0.34549 0.6675 0.39197 0.40694 0.054233 0.022444 -0.56019 -0.21515 -0.013677 0.72225 0.042695 -0.0076101 -0.028901 -0.019452 0.062651 -0.0091286 0.3894 1.5524 0.1649 -0.8744 -0.0026322 -0.29 0.83063 0.34827 -0.02562 1.0593 1.5441 -0.43572 0.40744 0.078727 0.066802 0.84494 -0.044009 0.52415 -0.90366 0.80287 -0.013953 0.44477 0 -0.83872 -0.56027 0.072253 -0.097627 0.049682 -0.53114 0.092025 0.017684 0.094032 1.0327 3.6569 0.013492 -0.47202 0.057939 0.065226 0.071391 0.5149 1.5588 0.77233 0.2338 0.62673 0.68999 0.74461 0.17468 0.050392 0.0114 0.48492 0.016146 0.00055459 0.0087528 0.00458 0 0.51037 2.1416 0.042537 -0.59948 1.497 0.0026357 1.7722 3.6569 -0.22404 0.13761 0.63569 0.004719 0.12564 1.039 0.42385 -0.14829 -0.052126 0.03369 -0.016017 -0.056307 0.013848 3.6478 -0.0034627 -0.04211 1.2141 -0.79978 0.16415 0.41412 0.18813 -0.62054 0.3348 -0.8744 0.018123 0.96852 0.63098 0.060524 0.010842 -0.61307 -0.0051227 1.1418 0.026057 -0.28335 1.6513 2.0812 0.39098 0.079447 2.8628 0.73492 0.053094 3.6092 3.6569 0.18556 0.76542 0.53274 1.1593 0.69989 0.0043021 0.11917 -0.028628 -0.016292 -0.0023553 0.041317 0.63591 Amplification Peak 19 - CN values 17q24.3 chr17:57292827-81195210(probes 1338862:1350713) chr17:68743653-68820968(probes 1345053:1345105) chr17:68301261-69132098(probes 1344722:1345380) 0.032181 0.032181 Actual Copy Change Given 0.74091 -0.0037855 0.021208 -0.18823 0.042307 0.7247 -0.70639 0.092025 0.14147 -0.012995 0.022746 0.45581 -0.022606 -0.01904 -0.0047079 0.65479 0.12138 0.33739 -0.01106 0.44681 0 -0.050911 0.030873 -0.34756 -0.037218 0.82177 -0.0069195 0.0029133 -0.59701 -0.0048374 -0.008613 0.001803 -0.10893 0.071678 -0.0023553 -0.051451 0.96411 0 0.0019418 -0.016841 -0.30235 -0.011749 0.079735 0.016705 1.495 0.07663 0.006109 0.0027745 -0.0094046 0.024496 -0.74652 0.28612 -0.00013862 -0.017391 -0.43854 -0.11352 -0.66809 -0.0013858 0.18495 -0.15592 0.021254 0.04812 0.068665 0 0.029108 0.043865 0.062365 -0.38906 -0.0077482 -0.42648 -0.34939 0.0088385 0.60856 0.02539 0.0083351 0.23876 -0.45121 0.015587 0.43176 -0.072675 0.48733 3.2129 0.39546 0.91655 -0.017827 0.096412 0.88826 -0.2005 0.052383 -0.0034627 -0.045364 -0.01409 -0.0044312 -0.0011087 -0.016841 -0.10289 0.80733 -0.047548 -0.17031 0.041317 -0.18268 0.35153 0.19801 0.23902 -0.10381 -0.02384 0.041175 -0.006505 -0.71737 0.28281 -0.044417 -0.11168 0.13746 -0.053995 -0.023018 0.01447 -1.0116 -0.0080244 -0.010232 -0.12161 0.033972 -0.074945 -0.0018014 1.3673 0.57004 0.17121 1.035 0.20335 0.010006 0.038601 -0.21515 -0.013677 0.4669 3.6569 -0.0076101 -0.028901 3.6569 -0.89194 -0.0091286 1.1145 0.094637 0.69111 0.061651 -0.0026322 0.16475 -0.041567 0.23442 0.76734 0.12476 -0.036401 1.4009 0.40744 0.073115 -1.134 0.037924 -0.059043 -0.10355 0.038065 0.7507 -0.00097017 -0.48386 0 0.041205 0.098851 0.062664 1.1604 0.87807 0.059794 0.092025 0.042166 0.094032 0.24731 0.022164 0.013492 -0.46608 0.057939 0.064654 0.071391 -0.44322 0.44782 0.17302 0.20947 -0.16307 0.40411 0.42403 0.073258 0.050392 0.0114 -0.50443 0.020343 0.00055459 0.0087528 0.00458 0 0.51037 1.0047 0.042537 -0.5852 -0.61633 -0.0041652 -0.070402 0.1795 1.8225 0.13761 -0.0051227 0.004719 -0.081738 0.24607 -0.36363 0.53021 -0.052126 0.58417 -0.016017 -0.056307 0.024969 -0.81942 -0.0034627 0.72678 0.32044 0.97626 0.16415 0.54824 0.18813 0.58578 0.94466 0.41061 0.018123 0.25144 0.67067 0.069255 0.010842 -0.056173 0.003191 0.32189 0.026057 -0.27488 -0.036401 0.39496 0.85502 0.13362 0.82843 -0.0030475 0.053094 -0.49996 0.075209 1.1852 0.21177 0.05466 0.0375 -0.25817 0.0043021 0.16115 -0.011473 -0.016292 -0.0023553 0.041317 -0.199 Amplification Peak 20 - CN values 19p13.2 chr19:6882410-7518283(probes 1395007:1395174) chr19:7407238-7437348(probes 1395131:1395140) chr19:6882431-7545986(probes 1395008:1395184) 0.0055689 0.0055689 Actual Copy Change Given 0.16079 0.53602 0.10543 0.051672 0.71961 -0.0024938 0.77599 3.6569 -0.0036011 0.0049969 0.15367 2.0632 -0.050698 -0.055634 0.86037 0.20855 0.07254 0.28089 0.16884 0.66272 1.2771 3.6569 0.013213 -0.013127 0.67938 0.29151 3.6569 -0.0062286 0.75968 -0.013256 -0.010269 -0.0008316 0.17905 -0.025209 -0.028765 -0.05442 0.16655 -0.0018014 -0.010646 -0.033541 -0.24715 -0.024114 0.29612 0.017404 -0.076412 0.13117 0.42402 0.00013863 0.37874 0.039001 0.79324 -0.032041 -0.00041585 -0.03095 0.42136 -0.044822 0.30042 -0.044551 -0.10618 0.04401 2.8336 0.047978 0.082476 0.015447 0.053806 0.050677 1.0606 -0.39464 0.7283 0.75528 0.068522 0.0054139 0.012655 0.015308 -0.057116 0.047978 -0.055769 0.38882 1.1295 0.22314 0.031718 1.6892 -0.046312 0.43068 0.60265 0.15132 0.43564 0.38949 0.8122 0.57041 -0.044836 -0.012713 -0.013636 0.0072217 0.9011 0.2006 -0.17246 0.47733 -0.25697 -0.091155 1.23 1.6963 -0.075745 0.49297 0.0062481 -0.03749 0.12741 1.0289 0.25386 0.073833 0.54312 -0.035136 -0.086386 0.10994 -0.079875 0.0055529 -0.0013858 -0.032041 -0.006843 0.34033 0.073546 0.39181 -0.014228 0.7134 0.43174 0.95754 0.12623 -0.074277 0.018243 0.0069145 0.10614 -0.065716 -0.0088526 0.34876 -0.020001 -0.042381 -0.018902 0.044574 3.6569 0.57255 0.51821 0.21207 0.082765 -0.0015243 -0.053849 -0.074492 0.23303 -0.0022168 0.039337 -0.049695 -0.44674 0.3206 0.10891 1.1733 0.064225 0.88766 0.34811 0.84297 0.020203 -0.019314 -0.017941 0.078006 0.056685 -0.015741 0.093621 -0.029584 0.035665 -0.61575 -0.14039 0.048262 -0.18798 1.0174 0.04259 0.027919 0.7249 0.96165 0.040751 0.013772 -0.40329 0.94343 0.7134 0.45428 -0.24448 -0.11861 0.31482 0.062223 -0.048613 0.91743 0.35643 -0.012438 0.59116 0.0084743 -0.0045695 0.0038854 -0.038578 0.70307 0.064743 0.031436 -0.58579 -0.010094 -0.23643 -0.028492 0.39928 -0.17917 0.064797 0.0081959 0.59242 0.12152 0.076566 0.10418 -0.22281 0.43919 -0.013815 -0.13794 -0.00069303 -0.088374 -0.015329 -0.43886 -0.024524 -0.26722 0.31626 2.2381 0.30026 0.54453 0.12447 0.12417 0.42301 0.15628 0.1685 -0.010906 0.76945 0.079447 0 0.24202 0.028305 0.13939 -0.10933 -0.11978 0.35186 0.056217 -0.19937 0.013492 0.62315 0.58077 0.091237 0.040609 -0.015054 -0.089831 0.069382 0.13125 0.0033299 1.349 1.1534 -0.022881 -0.0008316 0.079303 0.71434 Amplification Peak 21 - CN values 19q12 chr19:30245403-30321189(probes 1403529:1403594) chr19:30304858-30316875(probes 1403567:1403593) chr19:28240495-33660696(probes 1401983:1405815) 6.1748e-09 6.1748e-09 Actual Copy Change Given 0.58983 -0.0084845 0.35727 0.051672 0.037924 -0.011887 0.25668 -0.012576 -0.018498 -0.022881 0.15367 1.9972 -0.050698 -0.055634 -0.81794 -0.056173 0.07254 -0.040209 0.1939 0.89066 1.2017 1.1711 0.013213 -0.087447 0.64818 0.27916 -0.0088526 -0.0063668 1.5727 -0.013256 -0.010269 -0.0008316 1.3985 -0.025209 -0.028765 -0.05442 -0.79836 -0.0018014 -0.015191 -0.011473 3.6569 -0.024114 -0.068261 0.017404 -0.076412 0.049318 -0.036401 0.00013863 1.8603 0.039001 0.14777 -0.032041 -0.00041585 0.80344 -0.44846 -0.044822 0.30042 -0.044551 3.6569 0.04401 3.6569 0.040044 0.082476 2.3645 0.053806 0.050677 0.055658 0.64799 0.757 0.099433 0.068522 -0.0011087 0.012655 0.015308 -0.057116 -0.096968 2.1508 0.44833 1.1295 0.22314 0.74765 2.5589 -0.046312 1.0514 2.3556 -0.68141 -0.10631 0.38949 0.056228 0.51751 -0.97785 -0.012713 -0.013636 0.00069327 -0.03054 3.6569 0.60593 0.058776 -0.25697 1.0568 1.9131 1.0134 2.3484 -0.17276 0.012237 -0.03749 0.11088 0.6779 0.61462 0.15347 1.2041 -0.035136 1.7159 0.65571 -0.079875 0.0055529 -0.0013858 -0.032041 -0.0060904 0.34033 0.073546 -0.18284 -0.0031859 -0.063838 0.43174 -0.10736 0.12623 -0.074277 0.018243 0.0069145 0.10614 -0.065716 -0.0088526 3.519 -0.0081624 -0.042381 0.73208 -0.00027724 -0.10788 -0.061958 0.47465 -0.74455 0.082765 -0.0015243 -0.053849 -0.074492 0.23303 0.0095883 0.11932 -0.049695 0.90412 0.072827 0.10891 -0.011611 0.0375 0.88766 0.34811 0.91764 1.1997 -0.019314 -0.017941 0.078006 0.056685 -0.015741 0.093621 0.99571 0.035665 0.41647 -0.14039 0.035665 0.40427 -0.97686 0.04259 0.010424 -0.022577 0.067805 0.033995 -0.03749 0.28913 0.48992 -0.071205 -0.29414 0.60521 0.6703 1.5828 -0.53459 -0.048613 -0.026684 0.95939 -0.012438 0.016845 0.0084743 -0.0045695 0.0038854 -0.038578 0.0079175 0.064743 0.031436 1.1208 -0.010094 -0.21381 1.043 1.0205 -0.17917 0.064797 0.0081959 -0.074945 0.12152 0.63536 0.62561 0.051103 -0.042233 -0.013815 0.95919 -0.00069303 2.9004 -0.015329 -0.0098185 0.99592 -0.3024 -0.17525 0.36871 0.30026 0.0027745 0.12447 -0.59682 -0.025072 0.56622 0.3794 0.72001 0.17407 0.56205 0 0.24202 0.017396 0.13939 -0.068127 -0.13496 0.35921 0.056217 -0.26203 0.013492 -0.063838 1.3244 0.068029 -0.53073 1.5863 -0.062092 0.056513 -0.0051227 0.0033299 0.074696 1.1534 -0.029857 -0.0008316 0.079303 -0.13031 Amplification Peak 22 - CN values 20q13.33 chr20:51959332-63025520(probes 1446913:1453816) chr20:60527043-60532396(probes 1453219:1453219) chr20:60458069-60869804(probes 1453174:1453394) 0.033553 0.033553 Actual Copy Change Given 0.62216 -0.0084185 0.11128 -0.0033243 0.032422 -0.011749 0.50672 1.0827 -0.0063668 -0.015054 0.049966 -0.46293 0.046559 0.020903 0.042166 0.018243 0.14786 0.46058 0.35708 0.57077 1.933 0.5989 3.0757 0.20381 0.65038 0.30282 0.0034687 0.015727 0.36362 0.00042473 0.0027379 0.0016642 0.27479 0.012516 0.035524 0.68031 0.050819 0.028481 0.0051359 -0.30275 0.015447 -0.0094046 0.73303 0.079303 -0.34688 0.047189 0.65737 0.013213 -0.33964 0.00050266 0.126 0.28406 0.010564 0.018523 0.012655 0.076998 0.044857 0.024268 0.072971 0.071108 2.177 0.070386 0.51612 0.043865 0.028763 1.0065 0.06537 0.28026 -0.005261 0.010842 0.87627 0.0013868 -0.085722 0.0012481 0.019643 0.064511 1.469 0.042166 0.77637 0.004719 0.38618 -0.073476 0.5516 1.3696 0.18417 0.088724 0.56687 1.412 0.094927 -0.0020784 -0.028218 -0.013264 -0.0083005 -0.015604 -0.0016629 0.56543 -0.26769 0.29197 -0.30604 0.63609 0.74159 0.53134 -0.016979 0.27043 -0.48155 -0.0030475 0.29135 0.03637 1.2707 -0.55266 0.63463 0.057939 0.21699 0.72641 3.6569 0.03031 -0.014778 0.012237 -0.0060904 -0.094856 0.64688 0.19695 0.00597 -0.31471 0.24963 0.92574 -0.17992 -0.20361 0.75147 0.047238 0.1428 -0.038442 0.011958 0.07254 0.0087528 -0.028628 -0.027535 0.22114 0.091445 0.0030522 1.4013 0.15681 0.043582 -0.0040162 0.080024 -0.019589 1.3917 -0.7019 -0.30134 0.013213 0.097106 -0.041974 0.066515 0.52031 -0.0024938 0.58453 1.8514 0.044999 -1.048 0.032281 -0.043602 0.1489 0.026402 0.22638 0.039731 0.52836 0.074876 1.0534 0.036415 0.1786 0.068952 0.033549 0.035947 0.0058309 0.44684 0.06208 -0.050447 0.46161 0.12049 1.0716 -0.016704 -0.027808 0.55992 0.67752 0.15039 0.11682 0.35499 0.017963 -0.0056757 -0.84579 0.019223 -0.010094 -0.0055375 -0.005261 -0.0042929 0.50147 0.049486 0.58632 0.42603 -0.0041546 0.018523 0.057795 1.645 0.17664 1.1919 -0.0020784 1.1399 0.25433 -0.36578 -0.059678 0.26624 -0.070135 0.023426 1.0432 0.0069435 1.8613 -0.0023553 0.33399 -0.41871 -0.2818 0.1227 0.53907 0.19269 0.60286 1.8309 0.039902 0.0095883 1.1032 1.1617 0.22408 0.044432 -0.24009 -0.015353 0.097106 0.004823 -0.28988 0.0048579 -0.064229 -0.043466 -0.94722 2.5868 0.018803 0.14503 0.63938 -0.010706 0.053237 0.22083 -0.047395 0.04344 2.0103 -0.0048461 -0.85805 -0.0053992 0.0015255 -0.00041585 0.024127 -0.59462 Amplification Peak 23 - CN values 21q21.1 chr21:16353532-18006975(probes 1454440:1455432) chr21:16891980-16895119(probes 1454854:1454855) chr21:16891285-16899143(probes 1454852:1454859) 0.21557 0.21557 Actual Copy Change Given 0.24087 -0.0068273 -0.15116 -0.021098 0.0048579 -0.0056757 -0.6479 1.2092 -0.0087146 0.01433 0.022024 0.44494 -0.011473 -0.0055375 0.0095035 0.51804 0.062794 -0.017254 0.0043021 0.53257 2.1411 0.65535 0.018243 -1.0085 0.41781 -0.39263 -0.018434 -0.010646 -0.40815 1.247 3.6569 0.0044411 -0.10933 0.0049969 -0.015329 0.75949 0.059223 0.0029133 0.00013863 0.0051266 -0.03817 0.0011093 0.20717 -0.34458 -0.14387 0.21659 -0.56664 0 0.083776 0.0039723 0.34736 -0.72517 -0.00055444 -0.0095426 0.033408 -0.03245 0.19558 -0.014641 0.24529 -0.081202 -0.020892 0.035524 -0.01849 -0.89381 0.018523 -0.54632 0.012655 0.71396 -0.0099565 0.061222 0.63463 0.0114 0.81279 -0.0071958 -0.027698 0.056085 -0.3659 2.8605 0.57487 0.026233 1.1167 1.488 -0.4564 1.1127 -0.028241 -0.027858 0.54665 -0.011473 0.003191 0.2749 0.00458 -0.0096806 -0.0040162 -0.0013858 -0.0087146 0.6618 -0.14759 0.023407 -0.19887 0.56187 0.48236 0.37957 0.0036076 -0.14898 0.052668 0.020063 0.22592 -0.0047079 0.10439 0.70513 -0.021478 -0.41487 0.24825 0.17437 0.059366 0.003191 0 0.0026357 -0.0087146 -1.0058 -0.035721 -0.78933 -0.0016629 0.0077783 0.61822 0.3799 0.6753 0.010424 -0.046583 -0.56736 0.24264 -0.028355 0.00597 0 -0.0033243 0.0072217 0.036088 0.010703 -0.0060904 0.043299 -0.38437 0.078582 0.028481 -0.0030475 -0.17462 -0.0040162 0.43041 -1.1696 0.070673 0.0095883 0.64139 0.30298 -0.055364 0.39147 0.012376 -0.0019399 2.3145 0.0023581 0.25339 0.0282 0.27525 0.00597 -0.014062 -0.59166 0.015028 0.27253 0.033408 -0.26384 0.036794 -0.84779 -0.5795 -1.2929 -0.10368 0.0012481 -0.43179 0.016845 0.0416 0.19969 -0.42418 -0.49267 0.84514 -0.68533 0.65903 1.3529 0.041458 0.43001 0.024969 0.84407 0.087969 -0.087049 0.43598 -0.005261 -0.0051227 0.0038854 -0.005814 0.45896 0.01344 0.53784 1.7704 0.080024 -0.91687 0.049113 0.19086 0.11506 1.8788 -0.0023553 0.83608 -0.031905 0.33739 2.9302 0.038771 -0.53141 -0.013402 0.84554 -0.32286 -0.99263 0.0020805 -0.52154 -0.4959 1.5838 -0.12564 0.047694 -0.058462 0.547 -0.32565 -0.042788 0.13362 0.054013 -1.19 -0.1574 0.021744 0.0072217 -0.0033243 -0.11887 0.0033741 0.16565 0.020203 0.37446 0.65112 0.018523 0.60341 -0.010278 0.04259 0.26169 0.031234 -0.34578 -0.084793 0.041883 -0.011887 0.042024 0.00069327 0.8087 0.0011093 -0.017529 -0.0041546 -0.017116 -0.53226 Amplification Peak 24 - CN values Xp21.2 chrX:9466686-63831850(probes 1492315:1514865) chrX:30420468-30484642(probes 1503038:1503100) chrX:30171728-31187193(probes 1502847:1503279) 0.19108 0.19108 Actual Copy Change Given 0.13784 -0.0029208 0.42623 0.13998 -0.020275 -0.060614 0.38403 0.39845 0.050392 0.44257 -0.4193 0.32447 -0.18416 0.25809 -0.13368 0 0 -0.25467 0.058937 0.025643 0.5294 3.2079 0.12977 0.62679 0.055658 -0.1736 0.023781 0.039761 0.0098669 0.058804 0.015829 0.014749 -0.56236 0.06208 3.6569 -0.061555 -0.16424 0.029184 0.024829 -0.056712 -0.040613 0.037641 0.40111 0.25605 1.7934 0.076486 -0.0023553 0.022304 0.0075 0.1036 -0.076489 0.44596 -0.01837 0.32866 -0.22392 0.30907 1.4378 -0.14103 -0.044551 0.13244 0.03609 -0.22121 -0.16217 -0.24107 -0.19775 -0.2319 -0.1382 0.82392 -0.13665 0.15801 0.7864 0.029466 -0.082269 0.043274 0.02539 -0.013127 -0.46504 -0.077345 1.0716 0.17166 0.90512 1.221 -0.23141 1.0769 0.37427 -0.063002 -0.55347 -0.010232 0.015447 1.0759 0.13051 -0.077878 -0.02186 0.00083195 0.015662 0.064082 0.43356 -0.020442 0.17317 0.52643 1.5554 0.94058 0.31354 -0.069511 0.0089506 -0.12043 0.71377 1.0971 -0.050581 0.5926 0.29342 -0.072274 1.1052 0.0011093 0.62752 0.0070826 0.1935 -0.031223 0.0114 1.2331 0.00041593 -0.25237 0.022444 -0.41586 0.072938 -0.16701 2.1383 0.33982 0.10235 -0.20289 0.60232 0.041317 0.047694 0.04429 -0.038306 -0.13691 0.75108 -0.082668 -0.018902 0.01447 1.0973 -0.27882 -0.09142 0.034818 0.28453 0.31948 0.93874 0.02222 -0.23997 0.6779 0 1.5953 -0.10473 0.91764 -0.20461 0.15591 0 -0.081073 1.8299 0.27159 -0.12681 -0.073076 0.46147 -0.24326 -0.081472 0.6727 -0.19362 -0.035176 0.39612 -0.075745 0.04782 -0.31365 -0.074411 -0.0027707 1.2083 -0.16064 0.019643 -0.12456 1.2662 0.65057 -0.073343 -0.53835 -0.041618 -0.30392 -0.154 0.56703 0.036653 -0.090626 -0.034495 -0.15022 0.61172 0.024829 -0.0030475 0.00055459 -0.06424 1.258 -0.037677 0.033835 0.85544 0.47924 -0.26925 0.046558 1.3499 -0.050506 0.22684 -0.00069303 0.051956 0.25558 -0.21094 0.88357 0.024969 -0.24009 -0.0012473 0.22022 -0.018078 0.65424 0.0072217 0.015308 -0.11234 -0.16434 0.83726 -0.49246 0 -0.28299 -0.33629 -0.21726 0.056935 0.61561 1.7038 0.32393 0.35381 -0.058435 0.0011093 0.15965 -0.072308 0.41195 -0.3617 -0.028218 0.69372 -0.34859 0.21945 0.43665 -0.23728 0.87847 0.78477 0.34404 0.63865 0.7781 -0.15234 2.571 -0.051432 1.5169 0.5555 -0.016979 -0.018459 -0.20573 -0.065772 Amplification Peak 25 - CN values Xq21.1 chrX:81233210-82660744(probes 1521310:1521962) chrX:82260757-82279635(probes 1521786:1521790) chrX:82157645-82460429(probes 1521706:1521882) 0.041746 0.041746 Actual Copy Change Given 0.77302 0.0057847 0.42623 -0.66541 -0.017116 0.51804 0.071616 0.39845 0.050392 -0.42811 -0.44448 -0.18207 -0.18416 -0.32936 -0.13368 0.012516 0 0.13942 0 0.022304 1.1106 3.6569 0.12815 0.46536 0.7528 -0.154 0.026514 0.017404 -0.23716 0.058804 0.028304 0.014749 0.23736 0.071879 -0.54653 -0.061555 -0.18848 0.029184 0.018663 -0.056712 -0.040613 0.037641 -0.1755 3.6569 -0.36556 0.076486 -0.067197 0.02511 -0.033477 0.085456 -0.11634 -0.38067 -0.01837 -0.38638 -0.27816 -0.39897 -0.59419 -0.14103 -0.081738 -0.3217 0.051459 -0.22121 -0.16217 -0.25962 -0.19475 -0.2319 -0.16077 -0.43951 -0.13665 -0.68314 -0.35533 0.029466 -0.082269 0.043274 0.02539 -0.013127 -0.46504 -0.085487 -1.2929 -0.52465 0.28406 -0.077478 0.1936 -0.071923 1.231 -0.094166 0.17618 -0.010232 0.015447 -0.68815 -0.38022 -0.077878 -0.018902 -0.014439 0.019663 0.0016642 -0.10513 -0.018371 -0.1382 0.94731 -0.33778 -0.53358 1.1516 -0.13398 0.031718 -0.12914 -0.63197 -0.48397 -0.050581 -0.036538 0.29342 -0.31879 -0.070536 0.016845 3.6569 0.0070826 -0.85654 -0.033494 0.0114 -0.64818 0.00041593 0.2609 0.022444 -0.41586 0.07441 0.3715 0.40061 -0.017254 0.10235 -0.20289 0.47735 0.041317 0.047694 -0.025263 -0.0020784 -0.12784 -0.10959 -0.082668 -0.032557 -0.46579 1.8011 -0.21466 -0.09142 0.034818 -0.16917 -0.466 -0.2 0.22731 -0.23997 -0.54875 0 1.2398 -0.10736 -0.41893 -0.20461 0.15591 0.27159 -0.11875 -0.5711 0.29549 -0.14271 -0.073076 0.40681 -0.24326 -0.081472 0.70738 -0.1945 -0.032723 -0.44566 -0.19433 0.04782 -1.1107 -0.15625 -0.0096806 -0.62004 -0.1609 0.019643 0 -0.59915 -0.52859 -0.067592 0.55107 0.0040243 0.78775 -0.18658 -0.45083 0.036653 -0.090626 -0.034495 -0.15022 -0.28096 0.024829 -0.0030475 0.00055459 -0.01849 -0.082398 -0.037677 0.023566 0.80636 -0.12148 1.8336 -0.029395 -0.67683 -0.050506 -0.54199 -0.00069303 0.051956 3.6569 0.080363 -0.18891 0.024969 -0.25986 -0.0012473 0.22022 -0.018078 -0.61393 0.0072217 0.015308 -0.070648 0.14429 -0.2133 -0.037626 -0.058958 0.15693 0.2771 -0.21726 0.056935 -0.12688 -0.59195 -0.1504 -0.26889 -0.050506 0.0011093 -0.74455 -0.084954 -0.61629 -0.3617 -0.028218 -0.50764 -0.34389 -0.12551 -0.2341 -0.27021 0.12167 -0.3102 0.21514 0.0043021 -0.40052 -0.14153 -0.64865 -0.051432 -0.59409 2.8487 -0.016979 -0.0047079 0.46212 -0.065772 Deletion Peak 1 - CN values 1p36.32 chr1:1-5923787(probes 1:1795) chr1:3685441-3695999(probes 223:225) chr1:1-19113057(probes 1:8526) 8.425e-11 8.425e-11 Actual Copy Change Given -0.11884 -0.0010163 0.11685 0.014356 0.031014 -0.84587 -0.1234 0.65185 -0.0056757 -0.66901 -1.0979 0.024829 -0.017199 -0.096704 0.028481 0.63385 -0.29721 0.64744 -0.025024 -0.028901 -0.2308 -0.044144 0.061079 -0.076545 0.057226 -0.0123 0.00055459 0.0029133 0.020483 1.6831 -0.009579 -0.0070718 0.058224 0.027216 0.0086135 -0.051586 0.10789 0.012097 0.0056919 0.075128 0.34421 -0.015879 -0.66383 0.023987 0 0.000893 -0.39608 0.0084743 -0.64302 0.0041764 -0.47327 -0.4775 0.00083195 -0.92904 0.0043021 0.0041281 -0.66439 -0.88316 0.17268 0.14935 0.020834 -0.89825 -0.79426 -0.9013 -0.96366 -0.99798 -0.9676 0.82216 0.012655 -0.88488 -0.90122 0.013632 0.064797 0.018803 0.0065262 -0.035448 0.54153 -0.063862 0.42217 -0.93293 -0.40484 1.3065 0.60034 -0.084046 0.20577 -0.76151 -0.36691 -0.092213 -0.7164 0.11668 -1.0339 0.0036076 -0.01829 0 0.0022193 0.67363 0.12476 0 -0.47649 0.69821 0.85011 0.07743 0.020063 0.10886 -0.038986 -0.051181 0.39496 0.021744 0.69279 0.18223 -0.035995 0.60106 -0.080792 0.38239 0.056228 0.018103 0.010703 0.0086135 0.00027728 0.79917 0.88386 0.85759 -0.00090061 0.039478 -0.2185 -0.13044 -0.26167 0.043255 0.019003 0.026204 0.060079 0.0084743 0.0114 0.14221 0 -0.0020784 0.72074 0.020203 0.0049969 -0.80633 0.5813 -0.75638 0.026092 -0.0062286 0.34496 -0.041567 0.3692 -0.62484 -0.77235 -0.0053992 -0.59692 0.52731 -0.80592 0.030591 -0.83219 0.09217 0.64818 -0.92465 0.19634 -0.94423 -0.029448 -0.66577 0.029495 -0.55387 -0.78302 -0.96202 -0.87276 -0.073343 -0.60361 0.20564 0.63774 0.055658 -0.0034627 0.0048579 -0.94859 -0.93893 0.038347 0.092025 0.10424 -0.54724 -1.0157 -0.62102 0.68449 1.3519 0.38303 0.84199 0.051387 0.017404 0.35088 0.0081959 -0.53368 0.0077783 0.0016642 -0.0023553 -0.56992 0.4446 -0.91281 -0.58559 0.61734 0.0052749 -0.059135 0.030872 0.49562 0.10874 0.028622 0 0.14236 0.062794 0.58274 0.18201 0.035806 -0.5431 0.001803 -0.0501 0.0016642 0.095508 -0.0033243 0 0.5352 0.30841 0.23395 0.034395 0.18404 -0.6566 0.79094 -0.93345 0.027357 0.20617 0.15352 -0.4613 0.048036 -0.078011 0.0012481 -0.14692 -0.88168 -0.30216 -0.99896 0.43429 -1.2929 0.96452 0.30266 0.014297 0.074984 0.55744 -0.73857 1.3585 0.12211 0.4913 -0.74063 -0.25962 0.0065262 -0.066252 0.0011093 0 0 0 0.44189 Deletion Peak 2 - CN values 1q44 chr1:208416154-249250621(probes 103194:128570) chr1:247691477-247698665(probes 128493:128496) chr1:202140437-249250621(probes 99366:128570) 2.6086e-08 2.6086e-08 Actual Copy Change Given -0.49758 -0.0010163 -0.29804 -0.47109 0.72848 0.0048579 -0.014707 -0.03286 0.0038854 0.010006 0.025812 -0.0019399 0.01433 0.017124 0.015168 0.0209 0.10103 0.48165 -0.0123 -0.028901 -0.62797 -0.78589 -0.27344 -0.48118 -0.22834 -0.39018 -0.0083005 0.0029133 0.024268 0.0013956 -0.0075085 0.00055459 -0.071338 0.0070298 0.0015255 0.0083351 0.0044411 0.0017647 0.008892 0.29119 0.24667 0 -0.84851 -0.37775 0 -0.2528 -0.57031 -0.0063668 -0.55867 -0.0060671 0.185 0.027357 0.00083195 0.0043021 1.2286 0.013772 0.12638 -0.83486 0.081755 0.044152 -0.059336 0.93203 0.057368 0.12314 0.023987 0.029141 0.044432 -0.49277 0.0063871 -0.35521 0.021961 -0.0030475 -0.27033 -0.0055375 0.0065262 -0.035448 -0.41509 -0.51728 -1.1443 -0.89802 0.38915 -0.07881 0.59368 -0.031137 -0.415 0.023737 -0.24569 3.4381 0.083776 0.0015255 0.021043 0.0014177 0.00069327 0 0.011679 0.23612 -0.47754 -0.31385 -0.50131 -0.13186 -0.063559 0.075559 0.040044 -0.48715 0.062937 -0.6907 -0.32838 -0.58921 -0.53977 0.83903 -0.032861 -0.045093 0.12049 -0.040417 -0.06871 0.019503 0 -0.0038779 0.00027728 0.74632 -0.13165 -0.39043 0 -0.32414 -0.95769 -0.053746 -0.12927 -0.19825 0.010146 0.02789 -0.23728 0.00041593 0.084498 -0.65202 0 0.0066653 -0.16357 0.0060306 -0.00097017 -0.014366 -0.96258 -0.38145 0.090575 0.93752 -0.2159 0.8697 -0.11365 0.5546 -0.77939 -0.85124 0.66143 1.2687 -0.87557 0.58596 -0.015886 0.64799 -0.71764 0.0095883 -1.0669 -0.82497 0.49702 0.15696 0 -0.038882 0.016845 -0.39553 0.016146 0.53415 0.91016 0.035065 0.55195 -0.00735 0.021463 0.00041593 0.48461 0.89227 -0.029175 0.17001 0.068665 -0.60187 0.0065262 0.14578 -0.1827 -0.032041 -0.47733 -0.199 0.02619 0.010344 -0.48418 0.027638 0 0.017124 -0.00055444 0.0015255 0.018243 -0.48155 0.012324 -0.018499 -0.070135 0.41714 -0.91148 -0.46185 -0.085192 0.29565 -0.70997 0 0.093719 -0.020549 -0.35327 -0.053566 0.078871 0.058367 0.001803 0 0.0016642 0.91137 -0.0033243 -0.53007 -0.55664 -0.24052 -0.14978 -0.46387 -0.29603 -0.64725 -0.99986 0 0.0092711 -0.090698 -0.64246 -0.089287 -0.28525 0.0070826 0.0012481 0.26641 0.005935 -0.73319 -0.93902 0.43226 0.61262 0.031436 -0.14451 0.20809 0.84632 0.14965 -0.11958 -0.61431 -0.059269 0.40315 0.023987 -0.51932 -0.0008316 0.16359 -0.0051227 0 0 -0.026792 -0.50235 Deletion Peak 3 - CN values 2p25.3 chr2:1-1917603(probes 128571:128753) chr2:1-489054(probes 128571:128571) chr2:1-3303807(probes 128571:129665) 3.2554e-05 3.2404e-05 Actual Copy Change Given -0.032509 0 -0.16769 -0.005261 -0.016292 0.0029133 -1.2929 -0.96567 0.00097064 -0.61556 0.055658 0.088403 -0.83473 -0.0055375 -0.0047079 -0.6173 -0.24691 0.092605 0.10024 0.33772 -0.038581 -0.012851 0.065083 0.10745 -0.028901 -0.3511 0.00027728 -0.0022168 0.611 0.020352 0.015131 -0.0011087 0.1882 0 0.00069327 -0.011198 0.033408 0.0056919 0.0051359 -0.0015997 0.32109 0.0040243 0.032704 -0.5349 -0.39975 -0.22988 0.00097064 0.00051405 0.31081 -0.0037913 -0.73824 -0.0043545 -0.0031009 -0.89644 -0.35373 -0.91787 -0.68424 0 -0.055769 -0.99325 -0.0024238 -0.9347 -0.78456 0.12402 0.0049969 -0.64358 0.0066053 -0.48544 -0.84483 -0.86719 -0.0042057 0.0056919 -0.6237 0.0052749 0.0043021 0.036794 -0.37377 -1.0392 -0.53652 -0.35931 -0.33907 -0.02151 -0.46621 0.31687 -0.047959 0.0072525 -0.35339 0.22283 0.0020805 -0.50727 -0.9004 -0.0047079 -0.0026322 -0.00027724 0.0024969 -0.11535 -0.2154 -0.3084 0.0058309 -0.29735 0.5495 -1.1455 0.032986 -0.11199 -0.072942 -0.01354 -0.21293 0.0063871 -1.2929 -0.13936 0.0047175 -0.68378 0.12008 0.14563 -0.28382 0.024127 0.040326 0.018103 0.0044411 0.38801 -0.15929 0.21253 0.001803 -0.74044 -0.22614 -0.59244 0.65112 -0.20099 0.037359 0.037753 -0.54169 0.040892 -0.56863 -0.25055 0.004719 -0.0037395 0.49548 -0.01849 0.017544 -0.069198 0.082765 -0.81884 -0.0060904 0.0026357 -0.1945 -0.95063 0.051497 -0.54391 -0.76381 -0.84219 -0.18497 -0.601 0.079159 0.019083 -0.017941 0 -0.24752 0.0098669 -0.344 0.05153 -0.46802 -0.6715 0.0043309 0.053237 0.0077783 -0.42571 -0.87767 0.34862 -0.60854 -1.2929 -0.083331 -0.016429 -0.3877 -0.0024938 -0.41342 0.0076392 -0.056153 -0.095516 -0.092081 -0.083731 0.049682 -0.56306 0.2287 -0.0013858 -0.48869 0.026233 -0.0030475 -0.0031859 -0.026441 -0.063838 -0.56246 -0.0015243 0 0 0.47907 -0.40396 -0.0050364 -0.08612 -0.036548 0.00069327 -0.29674 -0.11391 0.41881 0.15517 -0.33574 -0.021771 -0.36703 0 0.0095499 0.058216 -0.010922 0 0.0058309 0.015137 0.00013863 -0.91153 0.0076392 -0.62013 -0.32321 0.29199 -0.071071 -0.6642 0.10614 -0.035316 -0.2233 0.0051359 0.0040243 -0.073015 0.086784 -0.097744 -0.10972 0.011958 0.0044411 -0.59876 -0.0050192 -0.75426 -0.92941 -0.036453 -0.5678 0.86481 -0.82497 0.0013868 -0.9168 0.49701 -0.16248 -0.44502 0 0.021884 -0.0087841 -0.41652 -0.0045695 -0.25781 0.0114 0.0055529 -0.00097017 0.69409 0.030169 Deletion Peak 4 - CN values 2q37.3 chr2:233877222-243199373(probes 254127:259357) chr2:239748105-240337579(probes 257981:258149) chr2:208126720-243199373(probes 238766:259357) 7.1647e-24 0.0016093 Actual Copy Change Given -0.45805 0.00050845 -0.51474 -0.005261 -0.037354 0.0029133 -0.64711 -0.41871 0.0040243 0.02806 -1.2929 -0.45693 0.032422 -0.0076101 -0.0071958 -1.2929 -0.12184 0.092605 0.10173 0.28929 0.11374 -0.60516 0.048404 -1.0217 -0.49642 -0.34962 0.00027728 0.0012481 0.066945 0.025399 0.015131 -0.0080244 -0.46206 -0.031398 0.027076 0.0065262 0.015587 0.0054725 0.0051359 -0.0022168 0.066802 0.0040243 -0.061823 0.3033 -0.8372 -0.21522 -0.57595 0.0022193 -1.1693 -0.0037913 -0.67655 -0.46046 0.0087528 0.053094 -1.2929 0.10935 -0.92682 -0.023105 -0.090526 -0.83017 0.047624 0.068235 0 -0.88743 -0.0056757 -0.64358 -0.0055375 -0.41289 0.0084743 0.14236 0.015866 0.003191 -0.63368 0.0095883 0.024127 -0.22244 -0.4462 -0.4884 -1.1612 -1.2929 -0.79319 -0.12793 -0.4448 0.32908 0.027193 -0.022911 -0.23153 0.12358 0.032281 -0.48617 -0.8806 -0.0047079 -0.0019399 -0.00027724 0.0024969 -0.53571 -0.74194 -0.18644 -0.31599 -0.30815 -0.31778 -0.50225 -0.37403 0.2218 -0.060884 -0.005307 -0.42123 -0.13846 -1.0705 -0.24727 -0.010923 0.033267 1.1981 -0.045135 0.49217 -0.0008316 -1.0484 -0.010698 0.0044411 -0.57723 -1.208 -0.37808 0.001803 -1.181 -0.27292 -0.051586 0.32503 -0.44685 0.037359 -0.55999 -1.1698 0.040892 0.25965 -0.18622 0.014888 -0.0037395 -0.04983 -0.00041585 0.0058309 -0.074678 0.0375 -0.77354 -0.0060904 0.0026357 -0.20311 -0.96545 -0.12888 0.028903 0.13273 0.019783 0.31517 -1.2901 -1.2929 -0.55557 -0.84307 -0.0011802 -0.14116 -0.0066755 -0.33987 -0.39265 0.034959 0.17679 -0.88246 1.3118 0.039337 -0.91153 -0.018885 0.061651 -0.64114 -0.80144 -0.54451 0.57006 0.017404 -0.35874 -0.39917 0.056085 -0.057786 -0.52028 -0.45501 -0.51842 -0.9254 -1.1752 -0.70118 -0.011335 0.023566 0.016425 -0.0030475 -0.0031859 0 -0.068931 -0.026988 0.0090312 0 0 0.45905 -0.93953 -0.0062053 -0.044957 -0.5795 0.00069327 -1.0255 -0.25914 -0.60191 -0.12694 -0.68724 0.0027745 0 -0.044686 -0.016704 -0.066446 -0.010922 0.55992 0.0058309 0.019503 0.00013863 -0.7732 0.0076392 0.2369 -0.3764 -0.17335 -0.15559 -1.2929 0.10614 0.54101 -0.4951 0.017404 -0.0060904 -0.06136 -1.2017 0 -0.44199 3.6569 0.00097064 -0.54965 -0.0050192 -1.2404 0.041883 -0.50463 -0.5351 -0.95785 -0.17196 0.0013868 -0.94181 0.0041632 -0.74355 -1.0552 -0.43511 0.36199 0.016286 0.04429 -0.0045695 -0.0058385 0.0084708 0.0055529 -0.00097017 0.71114 -0.015879 Deletion Peak 5 - CN values 2q37.3 chr2:242162274-243199373(probes 259185:259357) chr2:242408088-242418361(probes 259312:259313) chr2:208126720-243199373(probes 238766:259357) 1.0055e-32 1.3282e-19 Actual Copy Change Given -0.45805 0.00050845 -0.51474 -0.005261 -0.037354 0.0029133 -0.64711 -0.86751 0.0040243 0.02806 -1.2929 -0.50088 0.032422 -0.0076101 -0.0071958 -1.2929 -0.12184 0.092605 0.10173 0.28929 0.11374 -0.55857 0.048404 -1.0217 -0.49642 -0.34962 0.00027728 0.0012481 0.066945 0.025399 0.015131 -0.0080244 -0.46206 -0.031398 0.027076 0.0065262 0.015587 0.0054725 0.0051359 -0.0022168 0.066802 0.0040243 -0.43691 0.3033 -0.90538 -0.21522 -0.57595 0.0022193 -1.1426 -0.0037913 -0.67655 -0.054555 0.0087528 0.053094 -1.2929 -0.74386 -0.92682 -0.023105 -0.090526 0.14891 0.047624 0.068235 0 -0.88743 -0.0056757 -0.64358 -0.0055375 -0.41289 0.024268 0.14236 0.015866 0.003191 -0.63368 0.0095883 0.024127 -0.22244 -0.4462 -0.4884 -1.1612 -1.2929 -0.79319 -0.12793 -0.4448 0.32908 0.027193 -0.022911 -0.23153 0.12358 0.032281 -0.48617 -0.8806 -0.0047079 -0.0019399 -0.00027724 0.0024969 -0.53571 -0.74194 -0.18644 0.6766 -0.7353 -0.6064 -0.50225 -1.1528 0.2218 -0.060884 -0.005307 -0.42123 -0.13846 -1.0705 -0.24727 -0.010923 0.033267 1.1981 -0.045135 -0.776 -0.0008316 -1.0484 -0.010698 0.0044411 -0.75018 -1.2477 -0.37808 0.001803 -1.181 -1.1617 -0.051586 0.32503 -0.44685 0.037359 -0.55999 -1.1698 0.040892 0.25965 -0.18106 0.014888 -0.0037395 -0.04983 -0.00041585 0.0058309 -0.41564 -0.48355 -0.77354 -0.0060904 0.0026357 -0.77761 -0.96545 -0.12888 0.028903 0.13273 0.019783 0.31517 -1.2099 -0.80559 -0.55557 -0.84307 -0.0011802 -0.14116 -0.0066755 -0.33987 -0.39265 0.034959 0.17679 -0.88246 -0.62808 0.039337 -0.91153 -0.018885 0.061651 -0.64114 -0.80144 -0.54451 -0.93497 0.017404 0.016006 -0.39917 0.056085 -0.057786 -0.52028 0.038913 -1.1792 -0.94876 -1.1752 -0.70118 -0.011335 0.023566 0.016425 -0.0030475 -0.0031859 0 -0.068931 -0.026988 0.0090312 0 0 0.45905 -0.93953 -0.0062053 -0.044957 -0.61053 0.00069327 -1.0255 -0.25914 -0.60191 -0.12694 -0.68724 0.0027745 0 -0.044686 -0.016704 -0.066446 -0.010922 0.55992 0.0058309 0.019503 0.00013863 -0.7732 0.0076392 0.2369 -0.39209 -0.21119 -0.15559 -1.2929 0.10614 0.54101 -0.4951 0.017404 -0.0060904 -0.06136 -1.2017 0 -0.44199 1.7128 0.00097064 -0.54965 -0.0050192 -1.2228 0.041883 -0.50463 -1.1954 -0.95785 -0.17196 0.0013868 -0.94181 0.0041632 -0.74355 -1.0552 -0.43511 0.36199 0.016286 0.04429 -0.0045695 -0.0058385 -0.0055134 0.0055529 -0.00097017 0.71114 -0.015879 Deletion Peak 6 - CN values 3p21.31 chr3:43774427-66121046(probes 283950:296549) chr3:49224733-49306825(probes 286609:286634) chr3:47079006-64815960(probes 285822:295489) 0.0034746 0.0034746 Actual Copy Change Given 0.040548 0.0053676 0.10354 -0.030404 0.025671 -0.006505 0.966 -0.039937 0.0017263 0.0012481 0 0.4153 0.021603 0 0 0.58722 -0.062518 0.42869 -0.088639 0.48716 -0.58039 -0.79728 0 -0.49078 0.0049129 -0.38716 -0.0013858 0 0.29469 0.0038942 0.0080199 -0.0044312 0.17603 0.0051359 0.017684 -0.0022168 -0.0083005 -0.0016629 -0.0034627 -0.37898 0.39911 -0.022058 0.016425 -0.29827 -0.42549 -0.23552 -0.0066173 -0.036129 0.54788 0.41038 0 0.041458 -0.0092666 0.00027728 0.0034687 0.018663 0.34502 -0.01106 0.018103 0.095076 -0.75301 0.017963 0.049638 0.090349 -0.0078863 0.026092 0 -0.45351 0.0016642 0 0.012795 0.00013863 0.0019418 0.0026357 -0.036616 -0.086253 -0.42804 -0.46483 -0.65314 0.048425 -0.35099 -0.028986 0.026333 -0.14931 -0.058122 0 0.41046 0.013712 -0.018078 0.03031 -0.69613 -0.71657 -0.00013862 0.00083195 -0.0027707 0.26702 -0.20124 0.0041379 0.09638 -0.12356 -0.10723 -1.1218 0.38733 -0.78474 0.72338 -0.68287 0.3688 -0.20112 -0.2913 0.052019 -0.01753 -0.51414 0.76542 0.58793 0 -0.68314 0.0044411 -1.01 0.0051904 -0.14824 0.096525 0.053948 0.0012481 -0.34274 -0.56397 0.84652 -0.1627 0.23814 0.0025774 -0.57023 -0.12694 -0.058058 0.0093098 0.13347 -0.49944 -0.96402 0.013213 0 -0.63718 -0.81643 0.50654 0.044432 -0.0024938 0.00027728 0.1898 0.016286 -0.62617 -0.0059522 -0.063032 0 -0.34398 -0.070804 0.023286 0.57791 0.026373 0.61793 -0.47744 0.001803 -1.0885 0.0088679 0.10424 0.14503 0.0089887 -0.60584 0.0041632 0 0.0040243 -0.5432 -0.63197 -0.80335 -0.46472 0 0 0.0051359 0.076405 0.016146 -0.037218 -0.15503 0.48544 -0.61604 -0.034264 0.36149 0.25918 0.011958 -1.0831 0.047978 -0.062898 0 0.017264 -0.04211 0.98076 0.0015255 0.0011093 0.0024969 -0.572 -0.42495 -0.0072477 -0.12779 0.30953 0.031657 0.077775 0.29596 0.010424 0.12933 -0.71149 0.0016642 -0.03885 -0.036538 0.34047 -0.065642 -0.017941 -0.54774 0.00097064 -0.72747 0 -0.13889 -0.0018014 -0.51846 -1.1331 -0.050641 -0.3943 0.099479 -0.039122 0.54541 0.12049 0.029606 0.010285 0.22398 -0.50815 -0.029211 -0.26264 0.01447 -0.00055444 0.2801 -0.89214 0.031155 0.016705 0.39629 -0.046312 -0.00041585 -0.08927 -0.0048461 0.017124 0.1158 0.040548 0.015168 -0.015054 0.0073609 -0.0032425 -0.2881 -1.01 0.2196 0.12064 0.0011093 0.00069327 -0.051621 -0.010922 Deletion Peak 7 - CN values 3q13.31 chr3:115440285-118620828(probes 321863:324091) chr3:115528065-117719768(probes 321905:323536) chr3:116606543-116609738(probes 322721:322722) 0.016788 0.061697 Actual Copy Change Given 0.040548 0.0053676 -0.1352 -0.030404 -0.0024938 -0.006505 3.6569 -0.05834 0.0054139 0.0012481 0.012701 -0.041596 0.021603 0 0 0.53327 0.11594 0.42869 -0.58872 -1.0351 -0.55807 0 0 -0.46823 0.0049129 0.03637 0.014609 0 -0.62484 0 0.0080199 -0.0044312 0.51751 0.0051359 -0.040345 0.024268 -0.0083005 -0.0016629 -0.0034627 0.0037465 -0.53896 -0.08818 0.0037465 -0.10079 -0.18131 -0.23552 -0.0023553 -0.012576 0.56507 0.40504 0 0.075559 -0.0092666 0.00027728 0.0034687 -0.0079524 0.31482 -0.0083005 -0.012851 -0.099885 -0.0068497 -0.0080244 0.0069435 0.52349 -0.0078863 0.01215 0 -0.44907 0.0016642 0 0.012795 0.00013863 0.0019418 -0.069198 -0.036616 0.055987 0.75337 -0.43528 0.030873 0.060794 -0.011198 -0.028986 0.64781 0.0063351 0 0 -0.54678 0.013712 -0.018078 0.03031 0.048262 -0.71657 -0.00013862 0.00083195 -0.0027707 0.26702 0.14935 -0.31402 0.09638 1.1336 0.025974 0.041458 0.029325 0.21202 0.72338 1.2734 0.22029 -0.045474 0.39795 0.052019 -0.016843 0.09043 -0.15067 0.58793 0.021043 -0.011473 0.0044411 0.00069327 0.0043021 0.073857 0 0 0.0012481 0.043299 0.69575 -1.1381 0.063652 0.23814 0.0025774 0.027046 -0.12694 -0.34228 -0.017941 -0.012438 0.0037465 -0.96402 -0.56176 0 -0.64208 0.040326 -0.34331 -0.78808 -0.0024938 0.00027728 0.1898 0.95778 -0.62617 -0.50764 -0.063032 0 -1.2929 0 -0.019375 0.016565 0.0040243 0.69372 -0.12317 -0.0094046 -0.34215 0.0088679 0.10424 0.14503 -0.010342 0.11418 -0.00038726 0 0.0040243 -0.51517 0.053094 -0.021921 0.4519 0 0 0.00027728 0.076405 -0.44642 -0.066638 -0.23814 0.35023 0.62642 0.015587 0.36149 0.23024 0.011958 -0.48218 -0.72835 -0.062898 0 -0.473 -0.04211 -0.14862 0.0015255 0.0011093 0.0024969 -0.57368 0.056228 -0.0072477 -0.12779 -0.52583 -0.00041585 0.085799 0.29596 0.02806 -0.25866 0 0.0016642 -0.045635 -0.016154 0.021183 -0.027733 -0.017941 -0.54774 -0.010301 -0.02775 0 0.061508 -0.0018014 -0.10237 0.9596 -0.14219 0.17754 -0.038034 0.082909 -1.1851 0.12049 -0.86287 0 -0.079948 0.15338 0.092476 -0.12395 0.027357 -0.00055444 0.26125 0.01667 0.016414 0.016705 0.39054 -0.57338 -0.005814 -0.175 -0.0048461 0 -0.96351 0.067313 0.087245 -0.015054 -0.57397 -0.0032425 0 0.012516 -0.26685 0.014682 0.0011093 0.00069327 -0.051621 0.057763 Deletion Peak 8 - CN values 3q29 chr3:161217822-198022430(probes 347234:365300) chr3:195937679-195973243(probes 364974:364987) chr3:195144439-198022430(probes 364883:365300) 0.0086757 0.062718 Actual Copy Change Given 0.040548 0.0031448 -0.57495 -0.21898 0.0068044 -0.006505 0.19269 -0.054016 -0.0037395 0.0012481 -0.03395 -0.053684 0.021884 0 -0.0090265 0.59027 0.11844 0.39092 -0.028491 -0.60003 -0.57625 -0.78631 -0.012162 -0.49788 -0.21973 0.0114 0.0016642 0 -0.12707 0 0.0080199 -0.0071958 0.29278 0.0051359 -0.040345 0.024268 0.01447 -0.0016629 -0.0034627 0.00036721 -0.51084 -0.08818 0.0037465 -0.21453 -0.18131 -0.23552 0.49735 -0.0034818 0.56223 0.41339 0.50957 -0.8163 -0.0092666 0.00027728 0.0034687 0.0023581 -0.51887 -0.0083005 -0.012851 -1.2011 -0.0068497 -0.93725 0.0069435 -0.31155 -0.0078863 0.049682 0 -0.45544 0.0016642 0.098415 0.012795 0.00013863 0.0019418 -0.0012473 -0.066439 0.055987 0.35986 0.11946 -0.55387 0.060794 -0.011198 -0.021235 0.60268 0 0 0 0.91865 0.032563 -0.02562 0.03031 0.048262 -0.71657 -0.00013862 0.00083195 -0.0027707 0.26702 -0.0024683 -0.071356 0.09638 0.35447 -0.15078 -0.00069303 0.029325 0.17794 0.72338 -0.67775 1.2896 0.0097276 0.40361 0.052019 -0.016843 0.09043 0.25152 0.5403 -0.073877 -0.011473 0.0044411 0.00069327 0.0043021 0.61244 0.038065 -0.021141 0.0012481 0.043299 0.77481 -0.2133 0.17468 1.2598 0.0040243 0.027046 -0.12694 -0.33006 -0.048748 -0.039937 0.0037465 -0.96402 -0.57516 0.0051359 -0.64198 -0.019177 -0.42274 0 -0.0024938 0.00027728 0.1898 0.016845 -0.62617 -1.162 -0.063032 0 0.80636 0 -0.019375 -1.0774 0.0040243 0.68235 -0.12317 0.0029133 -0.34215 -0.82073 0.10424 0.073773 -0.0099279 0.23457 0.00013863 -0.43918 0.0027745 0.015168 0 -0.021921 0.4519 -0.0057472 0 0.00027728 0.076405 0.0051359 0.052921 -0.29296 0.46981 0.65207 0.015587 0.20023 0.22037 0.73872 -0.48848 0.18102 -0.062898 0 -0.48271 -0.04211 -0.14862 0.0015255 0.0011093 0.0014832 0.0022193 0.05694 -0.0072477 -0.62627 -0.51554 -0.00041585 0.085799 0.29596 0.58775 0.14073 0 0.0016642 -0.045635 -0.073076 -0.32507 -0.054077 -0.017941 -0.53847 0.0086135 -0.02775 0 0.061508 -0.0018014 -0.091023 -0.36113 0.12344 0.17754 0.012252 0.082909 -0.64114 -0.0023553 0.059508 0 -0.082209 -0.52082 1.3497 -0.12395 -0.0022168 -0.00055444 0.29819 0.01667 0.017295 -0.95159 0.39054 -1.1988 -0.015466 0.40161 -0.0048461 0.023847 -0.42953 0.068603 0.11594 0.5989 -1.2608 -0.0008316 0.021323 0.012516 -0.27009 0.0048579 0.0011093 0.00069327 0.0091705 -0.53378 Deletion Peak 9 - CN values 4q35.1 chr4:179280062-191154276(probes 463089:467428) chr4:183534656-184242476(probes 465384:465403) chr4:156678964-191154276(probes 450599:467428) 2.3968e-14 2.3968e-14 Actual Copy Change Given -0.15747 0.00052734 -0.7539 0.013074 -0.035993 0.0087528 -0.60458 0.92635 -0.0047079 0.018523 -0.030813 0.40527 -0.045635 0.018663 -0.020961 0.657 -0.25334 -0.48743 -0.028081 0 -0.99549 -0.79828 -0.0048461 0.18722 -0.46823 0.085221 -0.0051227 -0.00097017 -0.49594 8.7972e-06 0.0067677 -0.012576 -0.48208 -0.01106 -0.0016629 -0.9029 -0.046854 -0.0027707 -0.0029091 -0.38033 -0.22932 0.001803 -0.48365 0.14697 0.045849 -0.2515 0.025952 -0.0038779 0.00041593 -0.44355 -0.11152 0.40594 -0.0056413 0.0068044 -0.381 -0.83397 0.013772 0.013074 0.62879 -0.74124 -0.035244 0.049824 0.037359 -0.821 -0.01633 0.031999 -0.019863 0.57987 -0.0023841 -0.36725 -0.028355 -0.0012473 0.030591 0.058367 -0.0070576 0.057796 -0.39786 -0.48523 -0.55503 -0.38627 -0.36397 0.65958 -0.43539 -0.0017147 -0.89535 0.74351 -0.21404 0.0081959 0.69521 -0.0044312 0.023005 0.018943 0.0037465 0.0044411 -0.0042929 0.014917 -0.26973 -0.059959 -0.0033243 -0.029035 -0.43895 -1.1555 -0.70944 -0.03808 -0.43474 -0.0696 -0.39719 -0.63093 -0.81013 -0.21317 -0.021511 -0.36641 -1.2929 -0.24229 -0.72287 0.00069327 -0.97849 0.0005042 0.0011093 -0.74342 -0.10631 0.23798 -0.0073339 0.38899 -0.34436 -0.58471 0 -0.40631 -0.032175 -0.57646 0 0.027778 -0.00097017 -0.016979 -1.6845e-05 0.030169 -0.54784 -0.016841 -0.018353 0.00013863 -0.33433 -0.044144 0 0 -0.39763 0.047836 0.44223 -0.51907 0 0.0083351 -0.44695 0.17377 -0.023429 -0.005814 -0.85393 -0.026304 -0.19975 -0.10959 0.27639 0.010424 -0.45147 -0.094196 -0.032606 0.22839 -0.0095426 -0.91507 -0.013127 -0.37977 -0.31669 -0.88296 -0.76424 0.038771 0.0063411 -0.0023553 -0.409 -0.0095426 -0.0067828 0.1714 -1.2078 -1.1605 0.0034687 -0.50079 -0.67398 0.18722 0.034254 0.0063871 -0.0025149 -0.0091286 -0.6955 0.032986 0.9637 -0.0038779 -0.00013862 -0.00027724 -0.57219 0.41463 -0.0080762 0.47753 -0.56037 -0.00013862 0.11932 -0.83341 -0.6332 0.1382 0.019363 0.0038854 -0.1526 0.30505 -0.083465 -0.011811 0.011192 -0.54108 -0.0086593 -0.055634 0.00097064 -0.8744 0.0081959 0.22947 -0.49454 -0.058596 0.058509 -0.61806 0.092549 -0.0013781 -0.014503 -0.97231 0.20412 -0.39503 0.60503 -0.16979 0.05466 -0.37335 -0.00013862 -0.10854 0.005935 0.0068044 -0.92629 0.35953 -0.56465 -0.041838 -0.64695 -0.21874 0.02511 -0.39381 -1.1826 -0.50194 -0.83978 -0.56853 -0.031905 -0.5293 0.0033299 -0.040616 -0.016154 0.010285 -0.00013862 0.67771 0.47924 Deletion Peak 10 - CN values 5p15.33 chr5:1-5129938(probes 467429:470197) chr5:1314317-1350010(probes 467493:467501) chr5:1299330-1359937(probes 467486:467504) 0.054392 0.054449 Actual Copy Change Given 0.9834 0.0027283 0.41098 2.7681 0.0049969 0.75261 0.66493 0.7042 0.46707 -0.0051227 0.0037465 0 0.40928 -0.00027724 -0.93637 0.60647 0.11038 0.16835 0.5029 1.1591 0.34599 -0.0123 -0.0832 0.17091 0.72452 2.4698 -0.56714 0.0027745 -0.15144 0.00014743 0.012479 -0.0010665 0.24397 -0.080408 -0.0026322 3.6569 0.028341 -0.0012473 0.0024969 2.1253 -0.5317 -0.010646 0.0050542 1.4061 -0.32623 0.60999 0.0075 0.0467 0.64598 0.41356 1.7922 -0.31006 0.018523 0.011958 0.76983 0.0013969 0.67734 0.037641 0.020483 0.15084 0.034184 0.013632 0.16385 0.13007 0.0072217 0.029184 -0.0066432 0.17618 0.00069327 0.12686 -0.018628 0.00033222 0.036088 0.39579 -0.0030475 -0.31926 -1.0304 1.3461 0.58381 0.068522 0.1388 -0.078311 0.12064 0.36635 -0.020573 -0.02285 0.037359 3.6569 0.13524 0.041175 1.4945 0.0033299 0.0029133 -0.0020784 0.00041593 0.23969 -0.31178 -0.34803 -0.38683 2.1339 1.0549 0.081322 1.7479 0.38546 0.54841 0.0044102 1.0865 0.36084 0.47461 2.1849 1.3429 -0.67214 2.7374 0.36477 0.13376 -0.90046 0.0055529 0 0 0.027028 0.22545 0.41697 -0.0011087 0.048546 1.3209 0.16768 -0.081073 0 -0.051645 -0.58001 0.26247 -0.28373 0.0028004 0.2641 0.0087528 -0.030813 -0.076012 0.00041593 -0.56684 0.069525 1.3316 0.018803 -0.045906 -0.0027707 0.8412 0.046133 -0.073877 0.11155 -0.80741 0.01433 0.598 -0.016979 -0.010784 -0.59906 0.0020805 1.3145 1.779 0.037924 0.93936 -0.060883 0.45803 0.13288 0.84755 -0.60729 0 -0.035448 0 0.48613 0.076135 0.050677 0.53819 -0.0094046 0.40827 -0.0027707 1.4075 0 0.033408 -0.12797 -1.0007 0.45288 0.018383 0.077862 -0.16396 2.3808 0.51769 -0.067116 -0.023018 0.0054139 -0.47533 -0.77414 0.48906 -0.017803 0.0011093 -0.0011087 0.55407 1.6713 0.0028612 -0.043466 2.6583 0.00041593 0.075559 0.25746 0.2006 0.17196 -0.78395 0.00027728 1.5149 1.1499 -0.25406 -0.27254 -0.017116 0.62916 -0.015879 1.2896 -0.3956 0.79704 0.0013868 1.2709 0.10308 0.23535 -0.35726 0.20809 0.1744 0.59638 0.038913 -0.070402 0.43378 0.1882 -0.49361 -0.39585 0.10906 0.022024 0.0011093 0.33221 -0.0062633 0.44172 0.031577 -0.5896 0.71829 1.7446 1.2821 0.026935 0.041883 1.3113 -0.054614 0.73416 -0.64715 1.5717 -0.013264 0.18935 -0.0024631 0.21576 -0.0055375 -0.007472 0.00069327 0.14816 0.54065 Deletion Peak 11 - CN values 6p25.3 chr6:1-25758514(probes 567455:584638) chr6:1-1015749(probes 567455:567455) chr6:1-18985048(probes 567455:580047) 0.014376 0.014448 Actual Copy Change Given 0.25974 0.014144 0.21179 0.03031 -0.012162 -0.81928 0.5788 -0.18144 -0.0027053 -0.012851 -0.69333 -0.46003 -0.83645 -0.68122 -0.90908 -0.0047079 -0.26179 0.20224 -0.041567 0.55074 0.088255 0.00013863 -0.10959 -0.49141 0.0055529 -0.0045695 2.1531 -0.0026322 -0.37752 0.0023669 -0.00072962 0.0030522 1.0701 -0.0031613 -0.0062286 0.0052953 0.0091705 -0.0018014 0.00055459 -0.0063668 -0.52358 0.00027728 0.021043 -0.35316 -0.90664 0.11132 0.018243 -0.0069195 -0.061823 -0.013178 0.24489 -0.33784 -0.0034627 -0.90722 -0.93267 -1.0597 -0.7196 0.010703 -0.27941 -0.19041 0.0014569 -0.92919 -0.20639 -0.084793 -0.97544 -0.92687 -0.055229 0.19223 0.004719 -0.14587 -0.93607 0.0026357 -0.63972 0.00041593 0.00069327 -0.11495 -0.41344 0.064225 -0.15758 -0.023155 0.3938 1.4536 0.62479 0.39456 0.16038 -0.83841 0.35092 -0.6995 -0.0088526 -0.3078 0.023426 0.011818 0.00027728 0.00010918 0.015866 -0.13329 0.22623 0.0016457 -0.041567 -0.03095 0.82944 -0.54371 1.4714 -0.33033 -0.0047079 0.0038854 0.23179 0.0044673 -0.16345 0.14622 0.65626 0.065083 0.28406 0.079303 0.018663 -0.0053992 0.0091705 -0.0062286 -3.1313e-05 -0.09578 0.036935 0.18919 -0.0073339 -0.16866 -0.17807 -0.044009 -0.12551 0.023005 -0.0030475 -0.57172 0.1625 0.014051 -0.049154 1.2371 -2.9643e-05 0.019363 -0.011473 -0.0085766 0.00041593 0.019503 0.90311 -0.8266 0.011818 -0.00041585 0.18556 -0.98829 -0.21948 -0.56565 -0.82391 -0.8416 0.42435 0.13155 0.024829 -0.58186 0.0034687 -0.024524 0.60575 0.032986 1.2158 -0.12252 0.011818 -0.086495 -0.10196 -0.6815 0.028622 0.73606 -0.03681 -0.058058 -0.64085 -0.066788 -0.59721 0.011382 -1.0208 0.0054139 0.035131 0.033127 0.19862 0.19756 -0.47923 0.56223 -0.93844 -0.48224 0.28865 0.674 -0.0083005 -0.72181 -0.11678 0.010842 0.41329 -0.2552 -0.010296 -0.0070576 0.0011093 0.0027745 0 0.48475 0.0059177 -0.61614 0.51603 -0.0087146 0.088548 -1.0575 0 -0.14348 0.0091705 -0.00041585 0.48148 -0.36745 0.34778 0.45864 -0.3395 -0.56083 -0.013677 -0.035721 0.0011093 0.052383 0.031156 -0.55106 -0.58137 1.2054 -0.080807 -0.12823 -0.28549 -0.027124 0.53801 0.022024 -0.0020784 -0.075285 -0.51455 -0.12822 0.076422 -0.050235 -0.0053548 -1.0666 0.010668 -0.45768 -0.95246 1.2304 -0.067056 -0.013123 -0.74011 -0.012851 0.013353 0.91723 0.0046586 0.86295 -0.15656 0.95056 -0.77785 0.57541 0.0016977 0.21438 -0.0083005 -0.23116 0.0011093 -0.035448 -0.4958 Deletion Peak 12 - CN values 6q14.1 chr6:66417081-104031403(probes 603178:624028) chr6:76456303-76635373(probes 609023:609124) chr6:67487815-83633736(probes 603811:612822) 0.0021591 0.0021144 Actual Copy Change Given 0.273 -0.00018476 -0.35337 0.03031 0 0.011818 -0.61614 -0.20386 0.003191 -0.60439 0.0062481 -0.46003 0.02308 -0.66781 -0.0066432 -0.071748 -0.25213 0.21945 -0.041567 0.55074 0.55939 -0.79352 -0.10959 0.56472 0.0055529 0.17558 -0.0083586 -0.0026322 0 -0.0072889 -0.00072962 -0.0011975 0.19573 0.0077783 -0.0062286 0.0052953 0.0091705 -0.0018014 0.00055459 0.010285 0.3499 0.0076392 0 -0.72721 -0.7046 -0.10796 -0.0041546 -0.0069195 -0.53602 -0.013178 -0.5378 -0.77371 -0.0034627 -0.0051227 0 -0.016841 -0.24752 0.031155 -0.62255 -0.19041 0.0014569 -0.0060904 -0.23129 0.049682 -0.0018014 -0.084783 -0.021647 0.026654 0.004719 -0.55717 -0.005261 0.0026357 0.0098669 0.00041593 -0.0123 0 0.15024 -0.43702 -0.53966 -0.89496 0.050534 1.4858 -0.46056 0.0072306 -0.4063 -0.030783 -0.16929 -0.5292 -0.0088526 -0.3078 0.047836 0.0068756 0.00027728 0.00010918 0.015866 0.37775 0.00097064 0.017386 -0.041567 0.36149 -0.43418 0.51472 0.030591 -0.41326 -0.43778 -0.67131 0.32044 0 -0.49267 0.058367 0.67511 0.072396 0.28311 0.080024 0.029881 -0.0053992 0.011958 -0.0062286 -3.1313e-05 -0.09578 -0.035993 -0.38917 -0.0073339 -1.1886 -0.13408 -0.067458 -0.017379 -0.018216 -0.0047895 -0.57152 0.1625 0.014051 0 0.0012481 -0.0026322 0.019363 -0.53022 -0.0085766 1.3343 0.019503 -0.32124 -0.012765 -0.0067318 -0.00041585 0.18556 0.038771 0.36805 -0.54105 0.07223 -0.01409 0.42435 0.13155 -0.010646 -0.55226 0.017724 -0.034768 -0.26276 -0.0090584 0.98142 -0.40528 -0.44555 -0.086495 -0.078783 0.1006 -0.00055444 0.11081 -0.03681 0.45275 0.071966 -0.18805 -0.57259 -0.006529 -0.09644 -0.0040614 -0.38882 0.0026357 0.13509 -0.46003 -0.46897 0.076854 -0.89733 0.1676 0.14474 1.3685 0.4294 -0.74734 -0.088507 0.010842 0.44528 -0.24667 -0.084753 -0.0008316 -0.00027724 0.0027745 0 0 0.0059177 0.37019 -0.47849 -0.0099565 0.088548 -0.087182 -0.58402 -0.14348 0.030591 -0.00041585 -0.0056757 0.020483 0.86672 -0.15214 -0.33641 -0.56083 -0.013677 -0.16396 0.0011093 -0.19162 0.031156 -0.48397 0.51403 -0.77855 -0.076945 -0.47469 -0.28549 0.43294 0.04741 0.00055459 -0.0085437 0.29012 -0.63576 -0.42592 0.016705 -0.6235 -0.0053548 -0.62226 0.003886 0.0090271 -0.91935 -0.48722 0.66569 0.011121 -0.23092 -0.012851 -0.95137 -0.37426 0.019582 0.45445 -0.52328 -0.55677 -0.29804 0.21177 0.0016977 0.25121 -0.016704 -0.23116 0.0011093 -0.071945 -0.5241 Deletion Peak 13 - CN values 7q36.3 chr7:157210222-159138663(probes 743921:744406) chr7:158375971-159138663(probes 744405:744406) chr7:143703621-159138663(probes 736846:744406) 2.9687e-06 2.9727e-06 Actual Copy Change Given 0.16154 -0.00018476 0.070412 0.010285 -0.055095 -0.78091 1.1323 0.15457 -0.0037395 -0.032084 -1.0591 0.39048 -0.81729 -0.0056757 -0.044822 -0.12187 0.045282 -0.022469 0.042024 -0.024251 -0.29521 0.55124 0.10979 -0.4805 0.58309 -0.060211 -0.005261 -0.1163 -0.65724 -0.0019311 -0.0054801 -0.015466 -0.49694 -0.00013862 0.009447 0.0049414 -0.0027922 0.0013868 -0.0099565 0.03369 0.38998 -0.00041585 0.006109 -1.149 0.098415 -0.11045 0.018383 -0.0012439 -0.60599 -0.014968 -0.093479 0.038489 -0.00051546 -0.0029091 -0.42833 0.011958 0.19634 -0.45097 -0.030008 0.13732 -0.83829 0.0069435 -0.23826 -0.93068 -0.0013858 0.03863 0.026092 0.20106 -0.0011087 0.15502 0.89066 -0.0022168 -0.62627 -0.0060904 -0.62179 0.063509 -0.47902 -0.022881 -0.59009 9.0073e-05 -0.26324 0.69036 0.65374 0.31572 0.084763 -0.004539 -1.0095 0.674 -0.027398 0.12918 -0.94011 0.0063871 0.00069327 0.0033299 -0.005814 -0.20224 0.097252 -0.38012 -0.35715 0.26059 -0.5841 -0.6215 0.025812 0.29846 -0.44264 -0.035585 0.30761 -0.6783 -0.91965 -0.56624 -0.050507 0.10366 1.5973 -0.25298 0.10541 -0.005261 0.0034687 -0.0033243 0.001803 0 -0.91394 -0.8408 0.29708 0.053521 1.0954 -0.25733 1.355 0.13998 -0.051856 -0.0019688 0.22176 0.0056111 0.53837 0.021744 0.0040716 0.010424 -0.064643 0.00013863 0.008892 1.0411 -0.033541 0.10264 -0.0013858 0.00055459 0.99779 -0.97644 -0.65678 -1.2278 0.032311 -0.0045695 0.12786 -0.076412 -0.81843 0 0.0090312 1.1815 0.29024 0 2.5256 -0.81326 -0.45939 0.2087 -0.013649 0.013213 0.0011093 -0.042381 0.029888 -0.52297 -0.60235 0.044715 0.39396 0.010006 -0.056712 0.0024969 -0.4211 0.0020805 -0.056981 0.1437 0.025952 -0.13897 -0.91304 0.41312 0 -0.033677 -0.0095426 -0.73836 0.054862 0.0052749 -0.010508 0.02539 -0.042245 -0.0060904 0.00041593 0.00055459 0.5493 0.025009 -0.0011608 0.19984 0.022585 -0.0031859 0.09304 -0.28561 0.30761 0.14355 -0.72252 0.00013863 0.012516 -0.29839 -0.025346 -0.10295 0.085799 0.61317 -0.038437 -0.1259 -0.0027707 -0.88735 0.0034687 1.1916 -0.55216 0 0.37825 -1.2155 -0.013953 -0.028765 -0.4034 0.017544 -0.011749 -0.43697 -0.61882 0.21439 -0.13768 0.21135 0.0015984 -0.1025 -0.0011436 -0.37008 -0.94919 0.28009 -0.5899 -0.94824 -0.20548 0 -0.011461 -0.091023 -0.034884 -1.0902 -0.16351 -0.5794 0.0043021 -0.2463 0.00083195 -0.059673 1.1102 0.0024969 0.00013863 -0.044415 -0.020143 Deletion Peak 14 - CN values 8p23.3 chr8:1-4251018(probes 744407:746248) chr8:1-617884(probes 744407:744407) chr8:1-8258018(probes 744407:747483) 8.3487e-08 8.5527e-08 Actual Copy Change Given 0.48416 -0.0024014 -0.78267 -0.21119 0.0083351 0.013074 -0.65799 -0.94325 0.13702 0.0051359 -1.1183 -0.046718 0.025952 0.015727 -0.018216 0.61516 0.10562 -0.56097 0.1661 -0.63405 -0.65957 -0.067993 -0.97217 -0.63547 -0.020824 -0.066654 -0.0024938 -0.0085766 0.57488 -0.056838 -0.0022534 0.0043021 -0.88181 0.008892 -0.0035737 -0.011335 0.023426 -0.0059522 -0.0066095 -0.38347 -0.83607 -0.011954 -0.11361 2.9167 -0.37403 -0.035459 -0.57196 -0.0013858 -0.87917 0.41205 1.0083 -0.44964 -0.70926 0.0054139 -0.42506 -0.0026322 0.30665 -0.9204 -0.88264 0.049259 0.43741 0.023566 0.020623 -0.86931 0.011121 0.011818 0.0086135 -0.32872 -0.0056757 0.15049 0.0073609 -0.0078863 0.035018 0 0 -0.28703 -0.57486 0.54347 1.002 0.05466 -0.83648 -0.078991 -1.1289 -0.014968 -0.0566 0.74484 -0.99367 -0.75248 0.047552 0.25277 0.016006 -0.051856 0.0012481 0.0011093 0.00055459 -0.18017 -0.76604 -0.090114 0.57434 0.00027728 -0.60137 -0.061286 -0.35476 -0.32998 0.56721 0.011539 -0.45372 -0.63982 0.33658 -0.36363 1.2703 0.016085 -0.39875 -0.55317 -1.2929 0 -0.0022168 0.019083 -0.0011771 -1.2929 -0.36383 0.73416 0.018803 -0.20744 -0.25139 -0.66346 -0.78429 0.13007 2.2353 -0.45792 -0.19375 -0.0030475 -0.01354 0.003191 0.0072217 0.006109 -0.57713 0.35283 -0.07401 -0.529 0.30074 0.023286 0.014051 0.0020805 0.079015 -1.037 -0.13652 -0.58392 0.040468 0.0095883 -0.30193 -0.1177 0.00069327 0.58274 0.0055529 0.10264 0.34567 0.010703 -0.57011 -0.38582 0 0.15159 -0.0041259 -0.60564 -0.0066432 0.39031 0.0013868 0.51664 0.11301 -1.2929 0.2157 -0.11861 0.034228 -0.0056757 0.084529 0.027357 -0.12593 0.19269 -0.50079 0.0084743 0.0095883 -0.057924 0.28675 -0.07361 -1.1789 0.10016 0.0010876 0.010703 -0.51094 -0.8343 0.44799 0.66771 -0.00069303 -0.0012473 0.55549 0.42974 0.0034166 0.54171 -0.91755 0.016006 -0.087181 -0.052127 -0.036477 0 -0.0066432 -0.0081624 -0.024935 2.8484 -0.72465 0.038001 0.0072217 0.052257 -0.042245 -0.055095 -0.00069303 0.021323 0.042449 0.27017 0.43934 -0.61978 0.13376 -0.4712 0.053237 -0.71551 0.80539 0.046984 0.41045 -0.45517 -1.2929 0.15309 -0.31611 0.025531 -0.0095426 -0.14142 -0.0070923 0.099724 0.032563 0.39427 0.015028 -0.012576 -0.86829 0.0051359 0.05281 -0.52041 0.042529 -1.1201 0.12697 -0.60332 -0.012835 -0.24168 -0.0029091 0.21837 -0.0048461 0.0041632 -0.0033243 -0.048478 -1.2929 Deletion Peak 15 - CN values 9p24.3 chr9:1-3826080(probes 825517:827513) chr9:840502-1540137(probes 825571:825669) chr9:1-3735467(probes 825517:827436) 5.1003e-05 0.18248 Actual Copy Change Given -0.075803 -0.0012781 -0.17219 0.038347 0.012655 -0.018353 -0.63244 -0.23092 -0.1402 -0.0063668 -0.30451 1.2196 -0.016567 -0.3058 0.022164 -0.67012 -0.24472 -1.0557 -0.35685 0.40127 0.5763 0.7072 -0.14772 0.028622 -0.50349 -0.24046 0 -0.020412 1.2192 -0.047657 0.0049602 -0.39884 -0.85226 -0.14103 0.0052749 -0.0034582 0.017684 0.00458 -0.0033243 -0.38022 -0.15745 0.0036391 -0.21193 -0.75204 -0.82733 -0.4413 -0.5716 0.031295 -1.0255 -0.016893 0.16526 -0.44555 0.0055529 -0.0095918 0.48406 -0.0029091 -0.17512 -0.26179 -0.31856 0.1006 0.39632 0.0162 0.031436 0.50082 0 -0.11691 -0.96107 0.86731 0 -0.41827 0.71999 -0.0053992 -0.62629 -0.017803 0.0027745 -0.27515 -0.38011 -1.0641 -0.84807 -0.027124 0.46605 1.3694 -0.50886 -0.81025 -0.43183 0.0068351 -0.24642 -0.59073 -0.74179 0.028341 -0.68205 0 -0.9032 -0.00041585 -0.023549 0.92574 0.2133 -0.64566 -0.1083 -0.023292 0.37696 -0.53632 -0.74142 -0.48914 -0.35079 -0.67665 1.2945 -0.1538 0.70607 0.03637 0.66678 -0.66299 0.18132 -0.83728 0.046417 0.010285 -0.012576 -1.0422 0.0097276 0.21315 -0.7331 0.026935 -0.0016629 0.096089 0.30424 0.0063871 -0.085988 0.027076 0.00027728 -0.55705 0.33707 -0.026441 0.5633 -1.2929 -0.030131 0.015168 -0.55807 -0.0038779 -0.010784 -0.81794 0.015587 0.030451 0.0062481 -0.0070576 -0.20074 0.020063 0 0.0019418 0.016425 0.0558 -0.39608 0.94645 0.0038854 0.50602 0.042885 -0.80368 -0.75883 0.0033661 0.89788 0.01447 0.015028 0.11697 0.0028033 -0.61978 0.020903 0.27726 0.020623 -0.54643 -1.2929 0.050534 0.29517 -0.99633 0.050677 0.013911 -0.42536 0.019561 -0.035721 -0.19124 0.51141 -1.1605 -0.915 0 -0.20333 0.89608 1.6915 -0.71693 -0.12466 -0.030011 0.60991 -0.33087 -0.019314 0.0036076 -0.013278 -0.0034627 -1.2462 -0.44685 -0.062008 -0.028628 0 -0.23444 -0.90995 0.21039 -0.92689 -0.53032 0.015866 0.0044411 0.5231 -0.18986 1.475 -0.6557 -0.0017239 -1.1457 -0.020846 -0.0090949 -0.0024938 -0.45736 -0.0013858 -0.81474 0.31145 0.1939 0.32689 0.16986 -0.28988 -0.59507 -0.46929 0.020763 -0.0047079 0.57085 -0.51404 -0.35725 0.037924 -0.012162 -0.0041546 -0.58823 0.0042672 -0.79269 -0.92592 -0.17006 1.1687 -0.96975 0.42671 0.010285 0.05694 -0.45436 0.71633 0.029606 0.00458 1.9166 0.013911 0.0073649 -0.0024938 -0.49996 0.01447 -0.014778 -0.00041585 0.73132 -0.50867 Deletion Peak 16 - CN values 9p21.3 chr9:21931610-22448737(probes 838907:839241) chr9:21999616-22011391(probes 838945:838969) chr9:18188243-29374153(probes 836050:843201) 4.1463e-30 3.0361e-26 Actual Copy Change Given -0.075803 -0.0012781 -0.17219 0.025976 0.012655 -0.018353 -0.63244 -0.23092 -0.04112 -0.0063668 0.2771 1.2196 -0.016567 -0.3058 0.0055529 -0.68104 -0.24472 -1.2929 -0.32959 0.40127 -0.21119 -0.78774 -0.14772 -1.0562 -0.98012 -0.94056 0 -0.020412 -0.53916 -0.01174 0.0049602 -0.32994 -0.44859 -0.065313 0.0052749 -0.0034582 0.017684 0.00458 -0.0033243 -0.37954 -0.0036011 0.0055529 -0.24302 -0.72403 -0.82733 -0.67743 -1.1232 0.031295 -0.42527 -0.81099 0.15621 -1.2929 0.0055529 -0.0095918 -0.88534 -0.0029091 -0.11022 -0.26179 0.026795 0.1006 -0.024866 0.034959 0.031436 -0.22797 0 -0.11691 -0.96107 0.7372 0 -0.41827 0.71999 -0.0053992 -0.63699 -0.017803 0.0027745 -0.63765 -0.87017 -1.2929 -0.53246 -0.027124 0.46605 1.3694 -1.2929 -1.1932 -1.2929 0.0068351 -1.2929 -0.56724 -0.74179 0.028341 -0.68205 0 -1.2929 -0.00041585 -0.023549 0.92574 0.22545 -1.0278 -1.2929 -0.023292 0.37696 0.064812 -0.24302 -0.48914 -0.92562 -0.66716 1.3152 -0.040209 0.70607 0.03637 -1.2929 -1.2929 -0.63368 -0.77252 -0.29804 0.010285 -0.012576 -1.2929 -0.00091134 0.51062 -0.7331 -0.79302 -0.0016629 0.055088 0.30424 -0.5065 -1.2929 0.10074 -1.2929 -0.55705 0.33707 -0.035857 0.5633 -0.88557 -0.030131 0.012795 -0.54532 -0.0038779 0.0048579 -1.2929 0.43479 -1.2929 0.0062481 -0.0070576 -0.21911 0.020063 0 0.039337 0.016425 0.0048579 -0.39608 0.50082 0.0038854 0.48975 0.042885 -0.80368 -0.13173 0.0033661 0.89788 -0.0036045 0.45309 0.11697 0.0028033 -0.6095 0.020903 0.27726 0.020623 -1.2929 -1.2929 0.050534 0.29517 0.95345 0.050677 -0.0031859 -0.42536 0.019561 -0.035721 -0.1837 0.46434 -0.54494 -0.0029091 0 -0.19687 0.89608 -0.14644 -1.2929 -0.12466 -0.030011 0.60991 -1.2929 -0.044169 0.0036076 0.0012481 -0.0034627 -1.2929 -0.44771 -0.062008 -0.028628 0 -0.23444 -0.90995 0.21039 -0.92689 -0.51239 0.015866 0.0044411 0.5231 -0.62188 -0.34435 -1.2929 -0.0017239 -1.1457 -0.0056757 -0.0090949 -0.69577 -0.45736 -0.0013858 -1.2929 0.31145 0.1939 -0.66772 0.16986 -0.61451 -0.62646 0.033831 -1.2929 -0.00055444 -0.4214 -1.2929 -0.35725 -0.30674 -0.012162 -0.0041546 0.18935 0.0042672 -0.79269 -0.92592 -0.17006 1.1687 -0.018765 -0.067592 0.010285 0.05694 -0.45661 0.039275 0.033972 -0.45211 -1.2929 0.013911 -0.73064 -0.0024938 -0.76372 -1.1872 -0.014778 -0.00041585 0.73132 -1.2929 Deletion Peak 17 - CN values 9q34.3 chr9:134952380-141213431(probes 890563:893171) chr9:140751190-141213431(probes 893110:893171) chr9:134856322-141213431(probes 890493:893171) 0.00032085 0.00031751 Actual Copy Change Given 0.54657 -0.00080108 0.24391 -0.030404 0.017963 -0.065998 -0.92949 -0.046041 -0.0077482 -0.0063668 0.0026357 0.438 -0.016567 -0.021075 0.018544 -0.68104 -0.29152 -0.29059 -0.33549 1.0405 -0.038581 -0.0087146 0.35871 0.045826 0.10103 0.1483 0 -0.020412 0.11609 -0.0082917 -0.013652 0.0090312 1.2903 -0.03504 0.0052749 -0.055555 0.026935 0.008892 0 0.34145 -0.0036011 1.7407 -0.01037 -0.0040162 -0.47596 0.13353 0.015308 0 0.58488 0.0035556 0.22444 0.58453 0.0055529 -0.9571 -0.88534 -0.0029091 0.033549 -0.25588 0.16625 -0.025616 -0.004638 0.034959 0.031436 -0.22797 0 -0.11691 0.042449 -0.41652 0 0.41078 0.71999 0.0029133 0.30473 -0.017803 0.0027745 -0.020138 -0.53073 -0.59497 -0.58686 -0.94496 -0.82015 1.4075 -0.50237 0.37145 -0.26831 0.034849 -0.053271 0.30299 0 -0.52818 -0.030677 -0.0019399 -0.0088526 -0.00041585 -0.024388 0.22576 0.2061 0.24807 0.12447 0.64579 0.37465 0.070974 -0.013127 0.2033 0.24202 0.00069327 -0.27953 -0.063404 -0.79761 0.41061 0.64213 0.015866 0.53766 -0.2537 0.18095 0.010285 0.043015 0.0073609 -0.00091134 0.44545 0.44443 0.66143 -0.0016629 0.12138 0.28537 -0.13238 0.51089 0.22422 -0.061555 -0.55355 0.33707 0.88546 0.51612 0.021603 -0.052821 -0.016979 0.48802 0.011679 -0.015741 0.063939 -1.2929 -0.73214 0.0062481 -0.0070576 -0.10473 -0.067458 -0.71167 -0.093271 0.0022193 -0.90571 -0.39608 0.074265 -0.78538 -1.1899 -0.57219 0.58381 0.14147 0.025671 0.080494 -0.045635 -0.49684 -0.048072 0.040639 0.057226 0.020903 -0.13329 0.028763 -0.54562 0.057268 -0.78159 -0.54663 -0.95392 0.050677 -0.0031859 -0.39728 -0.936 0.099288 -0.06142 -0.45586 -0.058327 -0.055364 -0.79352 0.21161 0.89608 -0.23753 -0.68852 0.17106 0.020623 0.33503 -0.35973 -0.54995 0.0036076 0.0012481 -0.0034627 -0.59068 -0.028901 -0.0083524 -0.028628 -0.58392 -0.024135 -0.25878 0.21039 -0.67481 -0.010784 0.0024969 0.0044411 0.25668 0.71058 -0.066252 1.7034 0 -0.53926 -0.025209 0.48406 -0.0008316 -0.012438 -0.0013858 0.30793 0.438 0.32479 0.057226 0.16986 -0.068532 -0.56236 0.040892 -0.015604 -0.00055444 0.24116 -0.66993 0.041757 0.18395 0.78099 -0.0041546 0.15427 0.0042672 -0.79269 0 -0.050213 -0.61085 0.0024969 -0.092478 -0.74168 -0.91402 -0.03395 0.05289 -0.20224 0.43399 -0.087033 0.013911 1.2619 0.0114 -0.4455 0 -0.014778 -0.00041585 0.78119 0.34827 Deletion Peak 18 - CN values 10p15.3 chr10:1-857150(probes 893172:893314) chr10:1-742144(probes 893172:893256) chr10:1-3137544(probes 893172:894436) 1.0469e-15 1.0298e-15 Actual Copy Change Given -0.47019 9.2496e-05 -0.97372 0 -0.80393 -0.78463 -0.69656 -0.64921 -0.00097017 -0.011473 -0.4826 -0.048207 -0.82625 -0.063032 -0.88372 -0.023703 -0.25793 -0.0076101 0.26812 -0.68058 -0.30334 -0.069867 1.1495 -1.2221 0.5169 -0.39408 -0.0070576 -0.0013858 -0.48124 -0.020678 -0.0057122 0.0075 -0.50131 -0.055844 -0.043873 -0.006505 0.0058309 -0.0019399 -0.00069303 0.0044411 0.09987 -0.0031859 -0.46918 -0.3973 0.067805 0 -0.54199 -0.00069303 1.7174 0.43423 0.61288 -0.37234 0.030732 -0.024388 -0.44394 -0.18609 -0.69911 0.0058309 -0.62236 -0.032583 -0.42744 0.043342 -0.7916 -0.12278 0.018523 -0.020687 -1.0115 -1.2929 -0.87786 -0.8586 -0.94249 -0.0036129 -0.03095 -0.071989 -0.0059198 -0.17272 -1.1236 -1.1178 -0.85329 0.0079175 -0.43874 -0.025893 -0.52839 -0.047987 -0.10436 -0.75018 0.022024 -0.063704 -0.13975 -0.5434 -0.95623 0.0044411 -0.0059522 0.0037465 -0.0029091 -0.60516 -0.23325 -0.32448 -0.89028 0.28707 0.31404 -1.2929 -0.00069303 -0.16761 0.059651 1.86 -1.2714 -0.54128 -0.025346 -0.53825 -0.01959 -0.21948 0.026795 0.72716 -0.36034 0.0034687 -0.0053812 0.0065536 -0.00043182 -0.92979 -0.29554 -0.058058 0.039195 0.17091 -0.18033 0.22576 0.61897 -0.49767 -0.38266 -0.56228 -0.033132 -0.0026322 -0.0098185 -0.039529 -0.038306 -1.0373 -0.58784 0.010006 -0.01904 -0.8186 -0.50287 0 0.040609 0.0022193 -0.32774 -0.015054 -0.136 -0.57802 -0.79761 -0.84443 -0.31484 0.26105 0.02525 -0.5791 0.022725 -0.81063 -0.22367 0.02539 -0.38536 -0.0026978 -1.003 -0.12135 -0.022304 -1.2929 0.018351 0.72508 0.016425 -0.6296 -0.17259 -0.81183 0.57095 -1.0196 -0.13018 0 -0.46012 0.020203 -0.075508 -0.16891 -1.075 -0.042924 -0.93718 -1.1788 -0.67104 1.8345 0.26812 -0.71156 -0.03286 -0.8814 1.4169 -0.81589 -0.59548 -0.0013858 -0.0019399 -0.0031859 -0.5852 -0.4268 -0.87871 -0.60448 -1.2097 0.0012481 -0.93577 0.2133 -0.61734 -0.11991 -1.1395 0.00083195 -0.37954 0.2233 -0.36136 -0.78753 -0.33964 -0.54017 0.00069327 -0.032314 -0.00027724 -0.83349 0 -0.053341 0.47697 -0.86168 -0.40385 -0.36488 -0.53885 -0.62064 -0.27248 -0.96946 -0.0022168 -0.45998 -1.2929 0.12448 -0.27129 -0.58535 0.0027745 -0.61172 0.005935 -0.012441 0.0020805 1.3445 -1.2929 0.0066653 2.9871 0.0012481 0.030029 -0.53114 -0.7959 0.90009 -0.87008 -1.2361 -0.76535 -0.70532 -0.015604 -0.30381 -0.0080244 -0.0044312 -0.00037335 0.7448 -0.12304 Deletion Peak 19 - CN values 10q23.31 chr10:89617158-89755074(probes 945105:945307) chr10:89617402-89735907(probes 945106:945295) chr10:89187178-91264600(probes 944867:946321) 1.7918e-09 7.6387e-08 Actual Copy Change Given -0.88329 -0.00046197 -0.13469 0 -0.77371 -0.78463 -0.65015 -0.22071 -0.0042929 -0.62713 -0.79469 -0.012648 -0.82154 -0.65771 -0.88264 -0.033046 -0.59808 -0.0089906 0.26812 -0.010094 -0.20536 -0.018628 -0.52266 -0.44566 -0.04428 -0.0038779 0.0020805 0.0023872 -0.0067813 0.006867 -0.009717 0.0075 -0.12004 -0.037671 -0.023429 -0.006505 0.0058309 -0.0019399 -0.00069303 0.0044411 0.09987 -0.0031859 -0.075078 0.019923 0.059369 0 0.010006 -0.00013862 -0.21886 0.41423 -0.82143 -0.38302 0.0051359 -0.89204 -0.4462 -0.92889 -0.70223 -0.80144 -0.62236 -0.80144 -0.039597 -0.91597 -0.51794 -0.85154 -0.95995 -0.098169 -0.7521 -1.2929 -0.63415 -0.8586 -0.92592 -0.0012473 -0.60041 -0.0045695 -0.0018014 -0.17272 -0.40097 -1.2929 0 0.045708 -0.31237 -0.059474 -0.47501 -0.42062 -0.4063 -1.2087 0.035665 -0.030404 -0.13975 -0.5434 0 0.0044411 -0.0059522 0.0037465 -0.013953 -0.16188 -0.7302 -0.32172 -0.28239 -0.080275 0.31404 0.61118 -0.00069303 -0.49923 0.046133 -0.68141 -0.57713 -0.61882 -0.44091 -0.15937 -0.01959 -0.21948 -0.64678 -0.25491 -0.27834 0.0034687 -0.0053812 0.0013868 0.0025654 -0.61027 -0.29647 -0.039122 0.039195 -0.25346 -0.15811 -0.076812 0.55514 0.12358 -0.094196 -0.075239 0.19764 -0.0026322 -0.0098185 -0.039529 -0.038306 0.0083351 -0.044415 -0.64377 -0.031632 -0.7874 -0.74368 -0.79017 0.017824 0.0022193 -0.32251 0.016286 -0.11035 -1.2929 -0.89809 -1.2929 -0.59255 -0.10828 0.02525 -0.5791 -0.86219 -0.79895 -0.27918 -0.91507 -0.37572 -0.0026978 -0.7799 -0.68323 -0.8623 -0.60502 0.016286 -0.47533 0.016425 0.043157 -0.30803 -0.81887 -1.2929 -0.96646 -0.13018 0 -0.43526 0.036088 -0.05469 -0.24703 -1.0875 -1.2929 -0.013677 -0.63906 -0.21144 -0.039573 -0.49475 -0.71156 -0.036129 -0.87111 -0.47416 0.043723 -0.56716 -0.0038779 -0.0032163 -0.0059404 -0.5852 -1.098 0.02043 -0.60448 -0.52123 0.0012481 -0.90627 -0.86578 -0.30463 -0.11991 -0.71176 0.00083195 -0.36068 -0.030626 -0.35624 -0.1103 -0.33964 -0.54017 0.00069327 -0.0042929 -0.00027724 -0.46958 0 -0.52016 -0.60323 0.16565 -0.11469 -0.55327 -0.043925 -0.0016629 -0.27248 -0.064106 -0.0022168 0.23449 -0.11273 -0.049004 -0.28465 -0.022195 -0.6193 -0.61172 0.0048171 0.064225 -0.93467 -0.52266 -0.022195 0.0066653 -0.19612 -0.76628 -0.92741 -0.44199 -1.2929 -0.44577 -0.045906 0.0023581 -0.76681 -0.21305 -0.015604 -0.82924 -0.0080244 -0.0044312 -0.00037335 0.7448 -0.44588 Deletion Peak 20 - CN values 10q26.3 chr10:135190263-135534747(probes 973644:973660) chr10:135190430-135206872(probes 973646:973654) chr10:132065842-135534747(probes 972886:973660) 0.00010153 0.026433 Actual Copy Change Given -0.49361 -0.00046197 -0.33512 0 -0.82154 -0.79521 -0.075612 -0.34263 -0.0042929 -0.62713 0.081177 0.04429 -0.86515 -0.69088 -0.92227 -0.28881 -0.26023 -0.0089906 0.26812 -0.12797 -0.23826 -0.018628 -0.58451 0.10555 -0.04428 -0.0038779 0.0020805 0.0070826 -0.012821 -0.003454 -0.009717 0.0041323 -0.099999 -0.031905 -0.023429 -0.032996 0.0058309 -0.0019399 -0.00069303 0.0044411 0.11052 -0.0031859 -0.075078 -0.43691 0.1434 0.10737 0.010006 -0.00013862 -0.23264 0.41423 -0.50563 -0.38302 0.0051359 -0.89204 -0.4462 -0.038578 -0.71024 0.016845 -0.60835 -0.80144 -0.014434 -0.91597 -0.7921 -0.88233 -0.95995 -0.10753 -0.97935 -0.49184 -0.85583 -0.88858 -0.92592 -0.0012473 -0.28287 -0.0045695 -0.0018014 -0.17272 -0.43116 -1.1243 0 0.042449 -0.31237 1.5301 -0.51233 -0.5151 0.35246 -0.74949 -0.0024938 -0.030404 -0.13975 -0.5434 0 0.0044411 -0.0059522 0.0037465 -0.022803 -0.16188 -0.69884 -0.32172 -0.25974 -0.080275 0.21901 0.56899 -0.00069303 -0.48264 0.046133 0.010285 -0.48544 0.81006 -0.34159 -0.9966 -0.01959 -0.21948 0.060365 -0.27911 -0.29414 0.0034687 -0.012635 0.025531 0.0025654 -0.81128 -0.27452 0.61226 0.039195 -0.75142 -0.20127 -0.061555 0.55673 -0.4935 -0.0008316 -0.038742 0.19764 -0.0026322 -0.0098185 -0.039529 -0.034223 0.0083351 -0.044415 -0.91108 -0.0034627 -1.0797 -0.99924 0.088258 -1.0088 0.0022193 -0.38571 -0.0034308 -0.11035 -1.2929 -0.97424 -0.84763 -0.4086 -0.10828 0.02525 -0.57901 -0.85202 -0.01904 0.54947 -0.91507 -0.37572 0.024408 -0.99291 -0.68323 -0.87617 -0.61402 0.016286 -0.47533 0.029184 -0.52092 -0.3071 -0.80972 -0.55156 -0.82987 -0.13018 0 -0.43526 0.036088 -0.056156 -0.24703 -0.33641 -0.86161 -0.013677 -0.63906 -0.21131 -0.039573 -1.2929 -0.71942 -0.036129 -0.89907 -0.47184 0.043723 -0.56256 -0.0038779 -0.0032163 -0.0059404 -0.5852 -0.45308 0.01879 -0.60448 -0.58941 0.0012481 -0.91695 -0.86578 -1.0139 -0.11991 -0.71176 0.00083195 -0.36845 -0.081472 -0.35624 -0.083658 -0.33964 -0.54017 0.00069327 -0.10117 -0.00027724 -0.087579 0 -0.52016 -0.60323 0.29835 -0.17012 -0.47363 -0.047395 -0.0016629 -0.27248 0.87428 -0.0022168 -0.089242 -0.56147 -0.056879 -0.28465 -0.022195 -0.0065732 0.3361 0.0048171 0.059366 -0.93467 -0.57267 -0.67205 0.0073609 -0.83219 -0.74942 -0.92741 -0.44199 -0.7257 -0.44814 -0.27307 -0.67269 -0.76681 -0.24126 -0.015604 -0.40672 -0.0080244 -0.0044312 0.00041593 0.7448 -0.62397 Deletion Peak 21 - CN values 11p15.5 chr11:1-496996(probes 973661:973672) chr11:1-496996(probes 973661:973672) chr11:1-7502262(probes 973661:977201) 8.2878e-09 8.2878e-09 Actual Copy Change Given -0.13062 -0.0035088 -0.48731 -0.20423 -0.00055444 0 0.8566 -0.42963 0 -0.012713 -0.30263 -0.44728 -0.00069303 -0.01409 -0.9 -0.20747 -0.05752 0.4681 -0.52276 -0.604 -0.78967 -0.021784 -0.31412 -0.022332 -0.01037 -0.38112 0.00458 -0.0040162 1.3274 -0.032851 0 0.0055529 -0.47427 -0.0008316 0.076998 -0.013127 -0.7674 -0.0049844 -0.0023553 -0.37988 -0.42746 0.00027728 -0.81729 -0.87354 -0.82513 -0.052742 -0.55491 0 -0.64368 -0.007938 -0.77563 0 0.0038854 -0.0083005 -0.4462 -0.7869 -0.69721 -0.038306 0.026935 -0.77626 -0.8053 -0.91402 -0.7885 0.094637 0.081899 -0.0070576 0.044857 -0.40595 0.0022193 0.07369 0.0052749 -0.00055444 0.024829 -0.00013862 0.0020805 0.16415 -0.81761 0.84041 -0.78614 -0.88588 -0.34458 0.70851 0.62806 -0.17074 -0.075367 0.016037 0.37495 -0.64865 0.020575 -0.54275 -0.71533 -0.031905 -0.0077482 -0.005814 0.00458 0.23628 -0.48502 -0.41159 0.41045 -0.24752 -0.52939 -0.79903 -0.099209 -0.48053 -0.009202 -0.036401 0.30537 0.0029133 -0.12784 -0.10158 -0.048542 0.0558 0.22283 0 -0.38325 0.0075 -0.0123 0.00013863 0.00027728 0.24762 0.027216 -0.34618 0.0019418 -0.76889 -0.28639 0.97585 -0.08094 0.0070826 -0.008989 0.043836 -0.59896 -0.53784 0.012795 -0.89197 -0.48879 -0.010646 -0.027398 0.0043021 0.0019418 -0.45415 -0.91935 -0.68761 -0.01892 -0.0079753 -0.16039 0.011121 -0.64396 -0.66301 -0.75823 -0.84547 -0.19462 -0.62613 0.030169 -0.028218 0 -0.648 0.74651 0.0375 -0.3755 0.79549 -0.98857 -0.21293 0.04078 0.025531 0.0093514 0.38308 0.013353 -0.52154 -0.57742 0.060508 -0.53297 0.016425 -0.47247 0.0010306 -0.43591 0.015866 -0.040345 -0.55046 -0.48611 -0.56147 -1.0003 -0.054825 0.21832 -0.032069 -0.54137 -0.67463 -0.087579 0.0065262 0.018383 -0.0696 0.0041632 0.00083195 0 0.0012481 -0.0087146 -0.027945 0.012742 -0.6146 -0.52246 0 -0.24036 0.12933 -0.052261 0.14846 0.65756 -0.0015243 0.045708 -0.017666 -0.013677 -0.3833 0.033972 -0.54854 0.0055529 -0.024251 0.001803 -0.8796 -0.005261 0.017264 -0.4984 -0.4119 -0.012989 -0.40362 -0.29675 -0.62417 -0.5655 -0.20408 -0.0038779 -0.41998 -0.52706 -0.13922 -0.21923 -0.019177 -0.0012473 0 -0.0046043 -0.35407 -0.95507 -0.5058 -1.2929 0.00027728 -0.19812 -0.74054 -0.92354 -0.98815 0.069463 -0.031986 0.6766 -0.66479 -0.78302 -0.26637 -0.0062331 -0.36719 -0.011887 -0.0094046 -0.0078038 -0.032041 -0.52971 Deletion Peak 22 - CN values 11q23.1 chr11:102825636-135006516(probes 1029846:1050466) chr11:111588550-111639215(probes 1034969:1034994) chr11:91537654-135006516(probes 1022662:1050466) 1.8105e-09 0.00037078 Actual Copy Change Given -0.48769 -0.0035088 0.050559 -0.20423 -0.00055444 0 -0.67034 -0.39842 0 -0.11129 -0.97495 -0.4476 -0.00069303 -0.4232 0.027919 -0.0077482 -0.2554 -0.53418 -0.3943 -0.59982 -0.58569 -0.01904 -0.36163 -1.0494 0.38667 0.14503 0.010982 -0.0040162 -0.44577 -0.10761 0.0012114 0.0055529 -0.87017 3.6569 0.076998 -0.013127 -0.79894 -0.10132 -0.0023553 0 0.45956 -0.0067096 -0.022857 -0.81005 -0.46206 -0.2871 -0.56707 0.0076392 -0.55667 -0.007938 -0.089776 0 0.0058309 0.0026357 -0.43594 -0.012576 0.084498 0.016815 -0.6171 0.14548 -0.22348 -0.91206 0.045282 -0.85011 -0.95589 -0.0070576 0.022024 0.32689 -0.004629 -0.86664 -0.00013862 0.0023581 -0.6277 -0.0022168 -0.0066432 -0.29248 -0.96927 -0.45522 -0.56286 0.058556 -0.3487 1.3667 0.67011 -0.40378 -0.46144 0.016037 0.41881 -0.59698 0.0558 -0.34836 0.012795 -0.0071513 -0.0077482 -0.0072245 -0.0067813 -0.57457 -0.47712 0.31416 0.46553 -0.38156 -0.525 -1.0878 -0.29426 -0.49531 0.042024 -0.69839 -0.68924 -0.6237 -0.23643 -0.49996 -0.019178 0.080312 0.020763 0.012655 -0.76775 -0.69712 -0.013402 0.00013863 0.00027728 -0.58225 -0.58009 -0.79486 0.0019418 -0.3651 -0.64847 -0.11064 0.60106 -0.063032 -0.018529 -0.55949 -1.161 -0.093271 -0.52818 -0.0092666 -0.76247 -0.0051227 -0.58946 0.0043021 -0.11783 0.0022193 0.021603 0.034677 0.011958 -0.0038779 -0.16039 0.025531 -0.62375 0.61611 -0.79886 -0.0055375 0.89006 -1.2288 -0.0072978 -0.56186 0.70907 -0.026931 -0.071338 0.0375 -0.36771 -0.81827 0.013074 -0.21293 0.006555 -0.044144 0.017684 -0.48155 0.013353 -0.54088 -0.6276 0.03128 -0.90753 0.016425 -0.037354 0.0010306 -0.43591 -0.96568 -0.040345 -0.43745 -0.46366 -0.5427 -0.0089906 -0.64311 -0.68515 -0.75296 0.0055529 -0.61633 -0.15992 0.0065262 -0.46451 0.066945 -0.020651 0.00083195 0 0.0012481 -0.58539 -0.98132 0.015534 -0.022606 -0.53449 -0.00027724 0.063939 0.96021 -0.072016 0.14846 -0.71408 -0.0030475 -0.072675 0.28913 0.014609 -0.032648 0.026892 -0.55511 0.053521 -0.020549 0.001803 0.15906 -0.005261 -0.52225 -0.51568 -0.26011 -0.012989 -0.61297 -0.30181 -1.1926 -0.11208 -0.33479 -0.0044514 -0.073816 -0.53429 -0.072815 -0.23092 0 -0.0012473 -0.60264 -0.0046043 -0.35407 -0.92294 -0.49996 -1.2243 -0.052126 -0.31401 0.0056919 0.04741 -0.92174 0.012874 -1.049 -0.43849 -0.60584 0.0019418 -0.45115 -0.0062331 -0.26877 -0.013932 -0.0012473 0.00083195 -0.023292 0.032422 Deletion Peak 23 - CN values 11q25 chr11:133400280-135006516(probes 1050110:1050466) chr11:133796323-134022086(probes 1050383:1050406) chr11:91537654-135006516(probes 1022662:1050466) 1.601e-11 0.00024119 Actual Copy Change Given -0.48769 -0.0035088 -0.78166 -0.20423 -0.00055444 0 -0.67836 -0.39842 0.016006 -0.11129 -1.0112 -0.4476 0.0091705 -0.4232 0.027919 0.0086135 -0.2554 -0.51156 0.25699 -0.59982 -0.20448 -0.78311 -0.36163 -1.0788 -0.56783 -0.037218 0.010982 -0.0040162 -0.44577 -0.10761 0.0012114 0.0055529 -0.36386 -0.031496 0.076998 -0.013127 -0.78387 -0.10132 -0.0023553 0 -0.46536 -0.0067096 -0.022857 -0.0070576 -0.46206 -0.35619 -0.55005 0.0076392 -0.56157 -0.007938 -0.77563 0 0.0058309 0.0026357 -0.46717 -0.012576 0.084498 0.016815 -0.6171 -0.94386 -0.51058 -0.91206 0.045282 -0.85011 -0.95589 -0.0070576 0.022024 0.32689 0.0025679 -0.87757 -0.00013862 0.0023581 -0.6277 -0.0022168 -0.0066432 -0.29248 -0.97025 -0.4847 -0.57348 0.082801 -0.3487 1.3387 0.67011 -0.40378 -0.42747 0.016037 0.41011 -0.67772 0.018383 -0.34836 0.012795 -0.0071513 -0.0077482 0.0040243 -0.0067813 -0.58706 -0.47712 0.31416 0.46553 -0.44514 0.94591 -1.148 -0.75573 -0.49531 -0.46227 -0.026304 -1.0085 -0.61143 -0.23643 -0.49996 -0.019178 0.080312 -0.015054 -0.014366 -0.76775 -0.69703 -0.013402 0.00013863 0.00027728 -0.72447 -0.58009 -0.79486 0.0019418 0.14935 -0.52018 -0.61748 0.60106 -0.063032 -0.018529 -0.55949 -1.169 -0.093271 -0.51362 -0.0092666 -0.4867 -0.0051227 1.4255 0.0043021 -0.094988 0.0022193 -0.52532 0.034677 0.034818 -0.0038779 -0.16039 0.025531 -0.57832 0.61611 -0.80144 -0.0055375 -0.24922 -1.2158 0.048262 -0.56186 0.70907 -0.013402 -0.77575 0.0375 -0.42814 -0.81827 0.013074 -0.34828 0.006555 -0.044144 0.017684 -0.4695 0.013353 -0.54088 -0.6276 0.078871 -0.93045 0.016425 -0.037354 0.0079175 -0.43591 1.7714 -0.040345 -0.02384 -0.0062286 -0.5427 -0.0089906 -0.64311 -0.68515 -0.75296 -0.53022 -0.61633 -0.15992 0.0065262 -0.44199 0.066945 -0.020651 -0.0056117 0 0.0012481 -0.58539 -0.069198 0.015534 -0.022606 -0.53449 0.019363 0.063939 0.96021 -0.072016 0.14846 -0.71408 -0.0030475 -0.12746 -0.33574 -0.35293 -0.77858 0.026892 -0.55136 0.053521 -0.020549 0.001803 0.15906 -0.005261 -0.535 -0.5474 -0.2654 -0.012989 -0.61297 -0.30181 -1.1722 -0.11208 -0.381 -0.0044514 -0.42402 -1.1696 -0.1152 -0.28275 0 0.0068044 -0.60264 -0.0046043 -0.35407 -0.92294 -0.49996 -1.2734 -0.052126 -0.42342 0.0056919 0.074121 -0.47194 0.024628 -0.53195 -0.43849 -0.60584 0.0019418 -0.44986 0.0083351 0.19573 0.026233 -0.0012473 0.00083195 -0.023292 0.032422 Deletion Peak 24 - CN values 12p13.1 chr12:10962282-13525906(probes 1055857:1057301) chr12:12863471-12922322(probes 1057019:1057047) chr12:9405724-18431914(probes 1055147:1060367) 0.00028241 0.00044322 Actual Copy Change Given -0.4999 0.016379 -0.088351 -0.022744 0.0083351 -0.0091286 -0.0078271 -0.095946 -0.0031859 0.0030522 -0.31354 -0.0012473 -0.02384 0.052373 -0.0060131 -0.68323 -0.25104 -0.76937 0.47289 -0.60352 -0.25043 0.85977 0.0083351 -0.39208 -0.31889 0.050108 -0.0034627 -0.00013862 -0.19049 -0.0022081 -3.6601e-05 -0.0057373 -0.11103 -0.085988 -0.0077482 0.0086135 -0.13742 -0.044144 -0.0013858 0.65756 -0.8204 -0.0076101 -0.86295 -0.34772 0.03369 -0.11842 -0.5795 -0.0041546 -0.18066 -0.0065567 -0.5142 0.019783 -0.0029091 -0.0042929 -0.88449 -0.035331 0.028763 -0.084793 -0.026988 -0.032174 -0.39068 -0.0034627 -0.005261 0.9363 0.0013025 -0.91327 -0.50173 -0.43832 -0.0085766 0.088837 0.00458 -0.0098185 0.0079175 -0.0053992 -0.0077482 -0.12629 -0.97793 -0.48565 0.51507 -0.91281 -0.37211 1.613 0.65663 -0.40842 0.16128 -0.76033 -0.24216 0.55166 -0.00013862 -0.51856 -0.93533 0.0036076 0.00097064 0.0011093 -0.016292 -0.14065 0.15382 0.064778 0.60593 -0.73757 -0.96995 -0.54007 -0.72163 -0.50363 0 -0.68332 -0.55737 0.0056919 -0.86163 -0.18484 -1.2929 -0.64837 -0.15221 -0.0082416 0.032845 -0.018902 -0.98167 0.95713 -0.0011087 0.52713 -0.027398 1.2094 -0.011335 -0.78732 0.84295 2.3781 1.3752 -0.10211 -0.0044073 -0.56248 -0.15131 -0.0011087 -0.0048461 0.68757 0.0013868 -0.0017607 0.024969 -0.14005 -0.64067 0.023145 -1.2929 0.11751 0.0040243 0.00041593 0 -0.955 0.27033 0.027778 0.023987 -0.83446 0.057796 -1.219 -0.01849 0 -0.054016 -0.011473 0.17016 -0.0083618 -1.0536 0.0027745 0.48544 -0.0066432 -0.54742 0.55407 0.0075 -0.0501 0.0095883 0.167 0.0049969 0.47221 -1.1345 0.013693 -0.03245 -0.0012473 0.43888 -0.00013862 0.038347 -0.0081762 -0.45947 0.012097 0 -0.57239 -0.20006 -0.015741 -0.48911 0.1428 0.43193 -0.025346 0.072109 0.79394 -0.5241 0.013772 -0.0013858 0 0.52101 -0.039804 -0.011387 0.51596 -0.51228 -0.047666 -0.91281 -0.051857 -0.26961 -0.17196 -0.077878 -0.0024938 -0.39708 0.34469 -0.34171 -0.68072 -0.10289 0.03637 -0.01037 -0.21726 -0.00097017 -0.70657 -0.0047079 1.0517 -0.48113 -0.40893 0.262 -0.13245 0.17257 -0.0078863 0.32109 0.022024 -0.0042929 -0.10007 0.098851 -0.077863 -0.29094 -0.0053992 0.001803 -0.60071 0.0026008 -0.80724 0.010994 -0.016567 0 -0.92592 -0.16967 -0.011198 0.022024 0.030029 -0.12114 0.45683 0.045566 0.55089 0.0015255 -0.47765 0.0023581 0.20381 1.2725 0.0013868 0.00013863 -0.053476 0.88966 Deletion Peak 25 - CN values 12q12 chr12:33514047-39688977(probes 1069895:1070135) chr12:33519526-39342878(probes 1069900:1069946) chr12:39259858-39261322(probes 1069924:1069925) 0.015597 0.020961 Actual Copy Change Given -0.086841 0.016379 -0.025596 -0.10661 0.0083351 -0.0091286 0 -0.095946 -0.0031859 -0.61374 0.029888 -0.0012473 -0.010123 -0.65342 -0.0060131 -0.68988 -0.25104 -0.063435 -0.071205 -0.60352 0.60828 0.66198 0.041386 0.020519 -0.2385 0.050108 -0.01106 -0.0074619 -0.59058 -0.0022081 0.0028767 -0.0034627 -0.1233 -0.066788 3.6569 -0.88186 -0.13742 1.7573 -0.0013858 -0.049559 -0.073076 -0.0076101 0.10045 -0.36125 0.03369 0.17625 -0.023703 -0.0041546 -0.051316 -0.0065567 0.071882 0.019783 -0.0029091 -0.86782 0.019643 -0.035331 -0.79235 -0.084793 -0.026988 0.24109 -0.049086 -0.0034627 -0.005261 -0.83676 0.0013025 -0.022332 0.031577 -0.43832 -0.0085766 0.088837 -0.00055444 -0.0098185 -0.19149 -0.0053992 -0.0077482 -0.049559 -0.38694 0.10235 -0.0026322 0.012934 0.44816 -0.021784 -1.2929 -0.051637 0.16128 0.021775 -0.24216 0.55166 -0.00013862 -0.52283 0.010006 0.0036076 0.00097064 0.0011093 3.6569 -0.14065 0.09667 -0.33227 0.60593 -0.083864 0.42623 1.1584 -0.29028 0.099192 0 0.0094491 -0.14374 0.0056919 -0.27786 0.20045 -0.016155 -0.66846 0.48664 0.12579 0.032845 -0.018902 0.013353 1.9444 -0.0011087 -0.59594 -0.25249 -0.0031859 -0.016281 0.032986 0.84295 0.78833 -0.063301 -0.045228 -0.012162 0.0049679 -0.23447 -0.0011087 -0.0048461 0.020623 0.0013868 0.003191 0.019783 -0.14005 -0.0069195 0.023145 0.33934 0.012237 0.0040243 0.00041593 0 0.019427 0.27033 -0.0063668 -0.77956 -0.83446 0.50446 0.40827 -0.01849 -0.0033243 -0.85369 -0.011473 0.17016 -0.0083618 0.97543 -0.0045695 -0.46653 -0.0066432 0.00030602 0.035383 0.0075 0.5546 0.0095883 0.0095883 0.0049969 0.47221 -0.43518 0.013693 -0.03245 -0.0012473 -0.030784 -0.00013862 0.038347 -0.29213 0.043299 -0.56276 0 -0.57239 -0.19642 -0.0067813 0.023706 0.1428 0.43193 -0.025346 -0.4342 0.03031 -0.45597 -0.00061386 -0.0013858 0 0.52101 0.0016642 -0.011387 0.51596 -0.018216 -0.022837 -0.91402 -0.051857 0.18465 -0.17196 -0.71862 -0.0024938 -0.31681 0.27614 0.27791 1.2489 -0.059404 0.03637 -0.01037 0.90311 -0.00097017 0.17317 -0.0047079 0.17414 -0.040177 0.10031 0.13509 0.15547 0.17257 -0.035857 -0.48628 0.020763 -0.0042929 0.52406 0.69185 -0.12015 0.037924 -0.0053992 0.001803 -0.60071 0.0026008 -0.35521 -0.92354 -0.48701 0 -0.92592 0.51699 -0.011198 0.022024 0.049966 -0.12114 0.026102 1.2718 0.0084743 0.0015255 -0.29969 0.0023581 -0.29154 1.2536 0.0013868 0.00013863 1.3488 0.92047 Deletion Peak 26 - CN values 12q24.33 chr12:132611527-133851895(probes 1123854:1123882) chr12:133154543-133851895(probes 1123882:1123882) chr12:133071480-133851895(probes 1123869:1123882) 0.2358 0.23643 Actual Copy Change Given 0.23838 0.031108 -0.53224 -0.11626 0.031859 -0.046041 -0.10029 0.60792 -0.030131 0.0065262 0.47255 0.0020805 0.00069327 -0.65342 -0.90858 0 -0.25104 -0.027398 -0.089831 -0.66152 0.17151 0.67567 -0.0048461 0.95939 0.18434 0.0019418 0.0058179 -0.00027724 -0.57427 0.0023669 0.0028767 -0.0051227 -0.42473 -0.094856 -0.0036011 -0.93201 -0.1316 0.00041593 -0.024935 -0.38504 -0.0096442 -0.0041546 0.04259 -0.40628 -0.0123 -0.22103 0.52363 -0.0026322 -0.051316 -0.0065567 -0.5879 0.019783 -0.0029091 0.00027728 -0.4209 -0.035331 -0.17183 -0.084793 -0.10723 -0.40892 1.3567 0.068091 -0.005261 -0.86263 0.019923 -0.022332 0.023898 -0.43094 -0.022195 -0.46911 0.0063871 -0.010508 -0.21627 -0.00013862 0.0051359 0.043157 0.50759 0.056085 -1.1883 -0.0084385 -0.43257 -0.021784 0.5585 0.34609 0.16128 0.021775 -0.31319 -0.68314 0.036088 -0.52283 -0.0033272 0.0036076 0.00097064 0.0011093 -0.028355 -0.14065 -0.24253 0.29149 0.19695 -0.20199 0.29725 -0.65631 -0.27212 0.1383 0 0.0094491 0.075271 0.0056919 -0.20576 0.0077783 3.6569 0.0036076 -0.7317 -0.26853 -0.099472 0.0093098 -0.94591 1.9033 -0.0011087 -0.11273 -0.25249 -0.080008 -0.011335 -0.38039 1.9972 0.19984 1.0145 -0.034768 -0.0082406 0.011789 -0.12125 -0.022744 -0.0030475 -0.67196 0.0068044 0.003191 -0.023292 -0.10289 0.0069435 0.023145 0.016006 0.69933 0.0040243 0.00041593 0.54594 0.81669 0.58309 0.5072 0.1348 -0.86052 -0.20722 0.40827 0 -0.0033243 -0.8343 -0.031632 -0.84115 0.031155 -0.37121 0.00458 -0.46653 -0.0066432 0.0050257 0.13066 0.0075 -0.059352 0.0026357 -0.12069 0.082476 0.11492 -0.43518 0.0026357 0.96617 -0.0012473 -0.53979 0.058367 0.038347 0.23969 -0.0034676 0.67048 0 2.3005 -0.21206 -0.0067813 -0.041159 0.02614 0 -0.025346 -0.43072 0.019643 -0.45597 0.00064431 -0.0013858 0 0.51062 -0.09635 -0.87489 0.5252 -0.57654 -0.0091286 -0.82521 -0.05347 0.2321 -0.17196 -0.024114 -0.0024938 -0.38448 0.28929 0.29205 0.49762 -0.11007 0.037359 -0.01037 0.67104 -0.00097017 0.13022 -0.0047079 0.21207 -0.039258 -0.26432 0.13509 0.70457 0.17257 -0.017391 0.011121 0.020763 -0.0042929 0.49052 -1.1723 0.1063 0.037924 -0.045364 -0.0028641 -0.60071 -0.0014326 -0.35521 -0.032779 0.55195 -0.015329 0.052525 -0.2595 -0.048478 -0.0078863 -0.52174 -0.12114 -0.026851 0.28659 -0.016841 0.010006 0.21177 0.0023581 -0.29154 0.00069327 0.0013868 0.00013863 1.4572 -0.17569 Deletion Peak 27 - CN values 13q14.2 chr13:48875329-49064807(probes 1142385:1142604) chr13:48875753-49060837(probes 1142386:1142602) chr13:1-90557232(probes 1123883:1164419) 1.3023e-59 1.3023e-59 Actual Copy Change Given -0.11004 -0.0048922 -0.27975 0.00458 0.0049969 -0.78707 -0.79022 -0.44448 -0.23288 -0.60477 -1.2929 -1.289 -0.81593 -0.66356 -0.88426 -0.65323 -0.2491 -0.51537 -0.33503 0.00041593 -0.22281 -0.77354 -0.27703 -0.63036 -0.47522 -0.023292 -0.01037 -0.015329 -0.25805 -0.0059434 0.0013501 0.0030522 -0.2233 -0.013815 -0.0069195 0.029888 -0.90008 -0.0022168 -0.0036011 -0.38067 -0.2233 0.0030522 -0.028081 -0.73827 -0.82538 -0.07275 0.0022193 0.002995 -0.53845 -0.0086283 -0.77826 0.041458 0.0027745 -0.88302 -0.87111 -0.92611 -0.75866 -0.81835 -0.61393 -0.7338 0.056157 -0.92311 -0.99409 -0.86136 -0.95558 -0.91357 -0.95891 -0.52461 -0.006505 -0.86018 -0.89649 -0.011749 -0.30334 -0.03286 -0.005814 -0.17677 -0.38862 -0.49861 -1.1495 -0.88958 -1.0829 -0.024388 -0.49548 -0.40566 -0.43747 -0.77378 -0.57842 -0.0056757 -1.2929 -0.53409 -0.90495 0.0020805 0.0024969 -0.00055444 -0.005814 -0.97217 -0.25221 -0.32972 -0.41553 -0.73468 -0.47175 0.43919 -0.73547 -0.1621 -0.4302 -1.2215 -0.42985 -0.62455 -1.2929 -1.1878 -0.010647 -0.051721 -1.2929 -0.10933 -0.58559 -0.020824 0.0093098 -0.0056783 -0.0027707 -1.2929 -1.2929 -0.20454 -0.008992 -0.77059 -0.49289 -0.18383 -0.066788 -0.2066 -0.0085766 -0.55609 -0.42222 0.0072217 -0.015741 -0.019433 -0.23704 0.010285 -0.54502 -0.911 -0.51753 -0.77363 -1.2745 -0.83414 -0.84771 -0.00055444 -0.21206 -1.2929 -1.1685 -1.2929 -1.2929 -0.83575 -0.31482 -0.61806 -1.2929 -1.2929 -0.80385 -0.80294 -0.38772 -0.94868 -1.0349 -0.81433 -0.46419 -0.71764 -1.2929 -0.63491 -0.017529 -0.4787 -0.88302 0.0054139 -0.6123 -0.13368 -0.58716 -0.95159 -0.9186 -0.0055375 -0.45958 -0.014366 -0.03245 -0.86916 -0.47712 -1.1152 -1.1833 -0.65314 -1.1588 -0.0072978 -1.2929 -0.72438 -0.16524 -0.86712 -1.2929 -0.3217 0.46212 -0.0055375 -0.0008316 0.0016642 -0.57407 -0.46525 -0.8666 -0.62942 -0.53276 -0.0080244 -0.91855 -0.87618 -0.58608 -0.52215 -0.72843 0.00027728 -0.3634 -0.31272 -0.3668 -0.77924 0.088113 -1.1518 -0.0040162 -0.0030475 -0.027808 -0.25793 -0.0020212 -0.42844 -0.54824 -0.75106 -0.17702 -0.74468 -0.16951 -0.012024 -1.1399 -0.34973 -0.018216 -0.091757 -0.88519 -0.13327 -0.35567 -0.55517 -0.0008316 -1.2929 -0.0091633 -0.8098 -1.2929 -0.50152 -1.2929 -0.91198 -1.1898 -0.78142 -1.2929 -0.50484 -0.76145 -1.2929 -0.39519 -0.58853 -0.77694 -0.64743 -0.0056757 -0.80799 -0.0078863 0.00055459 -0.0020784 0.69503 -0.0089906 Deletion Peak 28 - CN values 14q24.1 chr14:65562996-84218136(probes 1204976:1216384) chr14:68278379-69199178(probes 1206344:1206881) chr14:67806121-75322326(probes 1206034:1210539) 0.0013077 0.0012874 Actual Copy Change Given 0.25239 0.0010632 -0.2103 0.017684 -0.60361 0.00597 0.50134 0.098878 0.0036076 0.028903 -1.2929 -0.44964 0.015243 0.006109 0.01419 -0.69585 -0.24995 0.10191 -0.33837 -0.60555 -0.24558 -0.77124 -0.51218 -0.46568 0.11741 2.362 -0.0084925 0.00041593 -0.61825 -0.013806 -0.0051592 0.014609 -0.037082 -0.029311 0.66014 0.0019418 -0.041431 -0.00097017 -0.0042929 -0.0078863 -0.18999 -0.27392 0.22083 -0.20448 0.029466 -0.11463 -0.55907 0.010703 -0.0056757 0 0.1923 0.010703 0.0037465 0.00458 0.038913 -0.77965 0.27568 0.0051359 0.028622 0.28122 -0.80306 -0.91672 -0.20112 0.079447 -0.95941 0.018329 -0.961 -0.4088 0.00069327 0.096816 -0.057789 -0.0033243 -0.012713 0 0.0043021 -0.036265 0.11257 0.544 -0.082402 0.49303 -0.33773 0.68291 0.60756 -0.42149 -0.45791 -0.75141 0.39722 0.50672 0.94629 0.046775 0.036794 -0.00041585 -0.0037395 -0.003012 -0.00097017 0.26875 0.83412 0.33656 0.3327 0.066658 -0.037605 -1.1117 -0.73055 -0.006134 -0.01257 -0.0026322 -0.067364 -0.6385 -0.701 -0.18044 -0.013878 -0.6604 0 0.22885 0.024548 -0.0036013 -0.0051227 0.0080567 -0.0059522 -0.20908 -0.52154 0.59009 0.00083195 -0.39553 2.0569 -0.054825 0.0022193 0.73303 0 -0.56378 -0.27655 -0.0085766 -0.55507 0.022725 -0.0012473 0 -0.56545 -0.10368 0.022585 -1.2929 0.0013474 -0.75119 -0.89097 -0.0037239 0.047268 -0.97075 0.36428 -0.54784 0.11155 0.013911 -0.40948 -0.056732 -0.85218 0.55762 -0.86161 -0.0030475 -0.32922 -0.016292 0 0.42267 0.46759 0.15532 -0.86246 -0.58843 -0.82285 0.22422 -0.88066 0.31097 -0.6256 -0.79878 -0.4627 0.014609 0.019223 0.00041593 0.073865 -0.9771 0.0058309 -0.17259 0.4932 -0.57071 -0.0008316 -0.63045 -0.20187 -0.027671 -0.52113 -0.64041 0.012655 0.0072217 -0.0047864 0.81376 0.51107 -0.0051227 0.0019418 -0.00027724 -0.0066432 0.0467 0 -0.012438 0.24684 -0.0042929 0.018678 0.16415 -0.030404 -0.51476 -0.34381 0.00027728 -0.3511 -0.019177 0.60611 1.1404 0.18238 0.048262 -0.0041546 0.36215 -0.0037395 -0.80724 -0.0055375 -0.51486 0.0041632 0.44392 0.54753 0.5259 -0.28807 0.55372 -0.38627 0.0090438 0.00041593 -0.08314 -0.56107 0.18058 -0.099736 0.0013608 0.00041593 0.43699 0.0070476 0.074121 0.018523 0.29931 -0.60613 -0.93821 0.4294 -0.0012473 -0.91957 -0.4368 0.06674 -0.49016 0.26454 -0.025346 -0.76809 1.3457 0.00597 0.6653 -0.0071958 -0.0063668 0.00055459 -0.026304 0.41412 Deletion Peak 29 - CN values 15q11.2 chr15:1-48627916(probes 1229311:1241760) chr15:24328498-24900737(probes 1229773:1229821) chr15:24857648-24859709(probes 1229798:1229799) 0.18974 0.18788 Actual Copy Change Given -0.52045 -0.00073915 0.080193 -0.07921 0.018692 -0.018353 0.56241 0.17679 -0.033132 0.0054139 -0.18383 0.37611 0.0051359 0.60106 0.012376 -0.02603 -0.081206 -0.51962 -0.34538 0.48561 0.38501 -0.055364 -0.0085766 0.05153 -0.020687 0 -0.00055444 0.1255 -0.033541 -0.010775 1.244 -0.010784 0.25058 0.012655 -0.00069303 -0.0034627 -0.068387 0.0073609 0.0099302 -0.3078 -0.46419 -0.0123 -0.094988 0.0416 0.02738 -0.042728 0.026795 -0.00055444 0.62297 0.0070305 0.090202 -0.33814 -0.70546 0.53851 0.022024 0.0065262 0.2974 0.069525 -0.014916 0.46244 -0.013057 -0.89664 -0.024524 -0.083731 0.024262 0 0.047694 -0.43387 0.004719 0.090285 0.018383 0 -0.27129 -0.011473 0.0062481 0.035383 -0.4152 0.024829 0.057511 0.38006 -0.024935 -0.073743 0.61915 -0.41908 0.33623 0.060968 -0.12421 -0.22945 0.036794 0 -0.016704 -0.00069303 -0.0053992 0.00083195 0.0025038 -0.31681 0.37166 -0.32961 -0.065716 -0.063678 1.4338 -0.56057 0.63317 -0.53463 0.035947 -0.0066432 -0.62665 0.57862 0.14518 -0.14232 -0.037627 -0.66504 -0.038442 0.042732 -0.088374 0.012516 -0.028481 0.0091705 -0.0034627 0.064368 0.51525 0.48664 -0.0028022 0 0 -0.076678 0.36625 0.04812 -0.0042929 -0.01632 -0.051451 0.017264 -0.56545 -0.13147 -0.0042929 -0.012162 -0.67472 0.026795 0.035806 -0.035857 1.8037 0.10555 0.0042961 -0.0027707 -0.10092 -0.011611 0.84179 0.44596 0.14697 0.0065262 -0.065179 0.41011 -0.018628 -0.032147 -0.00055444 1.3203 -0.30463 -0.051316 -0.43507 -0.41267 0.44443 0.17211 0.0072506 -0.60757 0.042307 0.48509 -0.86712 -0.57801 -0.065447 -0.79382 -0.99067 0.71396 0.0068044 -0.0027707 0.54457 0.047126 0.015308 0.023987 -0.52685 0.44105 -0.047395 -0.24265 1.4953 0.59386 -0.54824 0.059651 0.037641 0.00013863 -0.040888 0.043299 0.50173 0.00041593 -0.0023553 -0.00069303 0.0097276 -0.03187 0.031806 0.56721 -1.176 0.0056919 0.039761 0.2035 0.17694 -0.52133 -0.73383 0.0040982 0.20106 -0.35339 -0.038714 0.85631 0.0951 0.052099 -0.0019399 1.1674 0.0017539 -0.076145 -0.0083005 0.25809 0.19989 0.24793 -0.18609 0.26153 0.1898 0.60023 1.1868 0.01279 0.0094491 0.1457 0.1795 1.0134 -0.15315 -0.028765 0.00013863 0.18945 0.012481 0.064797 -0.0041546 -0.33906 -0.005814 0.010424 -0.24058 0.016565 0.10585 0.058692 0.023786 -0.5719 0.25027 0.0086135 0.023005 0.20045 0.0049969 -0.14772 0.0067895 -0.012851 0.00083195 0.0041632 -0.019177 Deletion Peak 30 - CN values 16q11.2 chr16:31804435-55329012(probes 1287306:1293143) chr16:31845698-46624790(probes 1287321:1287339) chr16:31850300-47268607(probes 1287322:1287605) 0.0011106 0.0043181 Actual Copy Change Given -0.49917 -0.0029552 -0.47605 -0.4867 0.020623 -0.0026322 -0.68624 0.33577 0.22283 -0.63424 -0.047395 0.39118 -0.81671 -0.66531 0.040468 -0.65622 -0.26059 -0.52589 0.1076 0.3893 0.30343 -0.062092 0.018383 -0.42364 -0.044144 -0.05752 0.0040243 0.003191 -0.22158 -0.00068423 -0.022643 0.00027728 -0.44921 -0.065447 0.0093098 -0.02384 -0.84131 0.011818 0.0075 0.0054139 -0.29627 -0.011473 -0.059 -0.38917 -0.026441 0.5616 -0.55597 0.0064619 -0.59867 -0.0022687 -0.51523 -0.21911 0.0114 -0.90404 -0.4534 0 -0.68113 -0.044415 -0.20647 -0.34457 0 -0.89128 -0.79352 -0.84819 0.03863 -0.92055 0.049843 -0.43862 0.006109 -0.84275 -0.36771 0.00013863 -0.062764 -0.04983 0.012376 0.057387 0.57077 -0.038197 0.0033299 -0.92485 -0.36465 -0.086253 -0.51249 -0.10583 -0.45181 0.055691 0.3794 0.44729 0.027076 -0.55106 -0.048478 -0.73819 -0.02603 -0.0038779 -0.0076101 -0.17828 -0.62594 -0.034796 -0.4434 -0.4329 -0.089016 -0.032797 -0.083067 -0.46082 -0.43772 -0.67463 -0.68232 -0.61249 -0.48418 0.1851 -0.039938 -0.10749 -1.2279 0.2958 -0.32762 0.027283 2.4893 -1.0206 -0.0040162 0.37607 -0.44469 -0.97601 0.0016642 -0.79593 0.082749 -0.59029 -0.13168 -0.17145 -0.028355 -0.56867 -0.074411 -0.017666 0.48733 -0.025893 0.00597 -0.017941 -0.036946 -0.89572 -0.0078863 -0.45843 -0.93504 -0.80783 -0.88233 -0.0047079 -0.20498 -0.057789 -0.64537 -0.58215 -0.77955 -0.85654 -0.42298 -0.098155 -0.85504 -0.060614 -0.85607 -0.80472 -0.196 -0.90742 -0.44437 -0.75202 -0.47564 -0.68542 0.023916 0.14622 0.037217 -0.46696 -0.87276 0.12182 0.09159 -0.79272 -0.58461 -0.95435 -0.99651 0.0034687 0.046919 -0.94547 -0.057654 0.3009 -0.48566 0.38469 -0.93717 -0.59468 -0.218 -0.06785 -0.070547 -0.70406 -0.091087 0.027357 -0.48984 -0.33768 -0.56117 -0.0018014 -0.00085674 0 0.54069 -0.91078 0.018191 -0.61738 -0.57021 0.017963 -0.96114 -0.9247 -0.31307 -0.51465 -0.72137 0.0029133 -0.35863 -0.052666 -0.36963 -0.27541 -0.14013 0.058367 -0.0033243 -0.074678 0.0066653 -0.046583 0.0098669 -0.95977 -0.58186 0.21806 -0.16307 -0.58735 -0.054825 0.038489 -0.47173 -0.2394 -0.0018014 -0.11071 0.57077 -0.16241 -0.13716 -0.050911 -0.0043571 -0.60574 0.0077434 -0.32948 -0.94737 -0.049154 0.45278 -0.95449 -0.28096 -0.77192 -0.91837 -0.089699 -0.38273 -0.48848 -0.094064 -0.61499 -0.75374 -0.16459 0 0.058937 -0.11352 -0.013815 0.0016642 0.022865 -0.55427 Deletion Peak 31 - CN values 16q23.1 chr16:78098006-79299841(probes 1306486:1307551) chr16:78129058-79247026(probes 1306517:1307522) chr16:78583258-78586506(probes 1307020:1307021) 0.0049799 0.010132 Actual Copy Change Given -0.49917 -0.0029552 -0.47605 -0.4867 0.020623 -0.0026322 -0.68624 0.33577 0.22623 -0.63424 -0.047395 0.39118 -0.84072 -0.66531 0.040468 -0.70658 -0.26059 1.158 -0.3371 0.44545 0.082473 -0.041295 0.018383 -0.38593 -0.044144 -0.38739 0.0040243 0.003191 -0.22638 -0.00068423 -0.022643 0.00027728 -0.48092 -0.065447 0.0093098 -0.02384 -0.84131 0.011818 -0.0018014 0.0054139 -0.29627 -0.011473 -0.077345 -0.38917 0.10016 -0.03675 -0.55597 0.0064619 -0.11286 -0.0022687 -0.51523 -0.21911 0.0114 -0.89924 -0.42996 0 -0.68113 -0.044415 -0.20647 -0.34457 0.019853 -0.89128 -0.79352 -0.85686 0.03863 -0.92055 0.071535 -0.43862 0.0020805 -0.86452 -0.36771 0.00013863 -0.062764 -0.04983 0.012376 0.057387 -0.42637 -0.024661 -0.023977 -0.92485 -0.36465 1.9551 -0.53149 -0.44893 -0.45181 0.078038 0.3794 0.44729 0.027076 -0.55106 -0.048478 -0.73819 -0.005814 -0.0038779 -0.0076101 -0.17828 0.51926 -0.34998 -0.43615 0.30761 -0.09444 -0.020824 -0.76552 -0.46082 -0.42331 -0.67223 -0.053796 -0.61249 -0.28358 -0.13173 -0.039938 -0.10749 -0.16208 0.2958 -0.31541 0.019363 -0.020275 -1.0206 -0.0040162 0.37607 -0.44469 -0.77643 0.0016642 -0.32451 0.66917 0.0095883 -1.2929 -0.17145 -0.032587 -0.55221 -0.074411 -0.017666 0.031577 -0.037082 0.00597 -0.0029091 0.012655 -0.90207 -0.0078863 -0.47173 -0.92889 -0.79235 -0.88233 -0.0047079 -0.20498 -0.057789 -0.64537 -0.56465 -0.77955 -0.8552 -0.42298 -0.098155 -0.85504 0.49874 -0.86499 -0.80161 -0.11926 -0.91624 -1.1281 -0.40716 -0.47564 -0.68542 0.014498 0.22241 0.037217 -0.46696 -0.87276 -0.28382 -0.61153 -0.7692 -0.55347 0.057226 -0.99651 0.0034687 0.046919 -0.94547 -0.057654 -0.54975 -0.48208 -1.1585 -0.044009 -0.59468 -0.218 -0.091816 -0.52798 -0.41102 -0.13316 0.027357 -0.020824 -0.33768 -0.54441 -0.0018014 -0.00085674 0 -0.56555 -0.41322 0.018191 -0.61738 -0.54945 0.017963 -0.96114 -0.92032 -0.30487 -0.51465 -0.72137 -0.00045361 -0.73011 -0.052666 -0.35464 -0.33449 -0.14013 0.058367 -0.0033243 -0.046448 0.0066653 -0.046583 0.0098669 -0.51135 0.1028 0.21806 -0.16307 0.19695 -0.054825 0.030029 -0.47173 -0.22071 -0.0018014 -0.11071 -0.62808 -0.16241 -0.13716 -0.050911 -0.0043571 -0.60661 0.0077434 -0.32991 -0.95217 0.32076 -0.61719 0.03214 -0.21231 -0.77192 -0.90987 0 -0.38273 -1.1227 -0.5065 -0.61499 -0.75374 -0.16459 0 0.16805 -0.11352 -0.013815 0.0016642 0.022865 0.40836 Deletion Peak 32 - CN values 17p13.1 chr17:7549751-7593565(probes 1317117:1317125) chr17:7557018-7593565(probes 1317118:1317125) chr17:1-10544265(probes 1314014:1318863) 2.06e-52 2.06e-52 Actual Copy Change Given -1.1874 -0.0037855 -0.32621 -0.18823 -0.74124 -0.79953 -0.7596 0.2631 -0.0080921 -0.64706 0.034536 -0.44964 -0.84835 -0.65892 -0.88766 -0.68332 -0.23018 0.12638 -0.01106 0.41613 0 1.0924 -0.12148 0.0558 0.36756 0.55531 -0.0069195 0.0051359 -0.61316 -0.0048374 -0.008613 0.001803 0.23938 0.071678 -0.0085906 -0.051451 0.080024 0 0.00069628 -0.016841 -0.29508 -0.011749 0.010285 0.016705 -0.0020784 0.48793 0.031155 0.0027745 -1.2929 0.024496 -0.78417 -0.35453 -0.00013862 -0.063178 0.008892 -0.94591 0.47581 -0.82757 -0.66531 -1.2929 -0.031836 -0.90274 -0.77855 -1.2929 -0.95021 -0.9 -0.94912 0.81786 -0.8521 -0.8646 -0.40152 0.0055529 0.053948 -0.00041585 0.0083351 -0.12213 0.92189 0.0114 -1.2929 -1.2929 0.026514 -1.2929 -0.53865 -0.47589 -0.017827 -0.70012 -0.50214 -0.67214 -0.68077 -0.55447 -0.03245 -0.73106 -0.0044312 0.0063871 -0.027329 -0.10289 -1.0015 -0.36795 -1.2929 0.95488 0.23894 -1.2929 -0.064643 -1.1976 -0.10381 -0.71114 0.85799 -1.2929 -0.03286 0.22545 -0.067233 -0.58432 -0.34366 -0.33768 -0.023018 0.01447 -0.016875 -0.022191 -0.010232 -0.59663 -1.2929 -1.2929 -0.0031128 -0.74985 0.56257 0.39197 0.40694 -0.77702 0.022444 -0.56019 -0.14913 -0.013677 0.247 0.042695 -0.0076101 -0.028901 -0.019452 -0.86923 -0.0091286 0.40011 -0.76012 0.1649 -1.2929 -0.0026322 -0.20212 -0.072942 0.34827 -0.02562 -0.7639 -0.85154 -0.43572 -0.68797 -0.81794 -0.21268 -0.80211 -0.061555 -0.25781 -1.2929 -1.2929 -0.013953 0.44477 -0.6194 -0.85542 -0.5788 0.072253 -0.095912 0.049682 -0.55547 0.10628 -1.2929 0.094032 -0.94715 -0.97955 0.013492 -0.47202 0.057939 0.065226 -0.55547 -0.45693 -1.2929 -0.94788 0.2338 -0.70559 -0.12979 0.58077 -0.66281 0.050392 -0.82342 -1.2929 0.016146 0.00055459 0.0087528 0.00458 0 0.51037 0.30026 -0.82679 -0.58677 0.070386 0.0058309 0.83353 -0.90188 -0.22404 0.13761 -0.75849 0.004719 0.12564 0.14905 -0.09512 -0.11475 -0.23055 -0.57051 -0.016017 -0.056307 0.013848 -0.79279 -0.0034627 -0.15656 0.25308 -0.79978 -0.76612 -1.2929 -0.15669 -0.59097 -1.2929 -0.8744 0.018123 -0.82452 -0.59322 -0.38905 -0.31096 -0.6264 -0.0051227 -1.2929 0.026057 -0.28335 -0.9726 -0.58215 0.39098 -0.91684 -1.2929 -0.032041 -0.93341 0.54647 -1.2929 0.019518 -1.268 -0.5387 -0.73784 0.69989 0.0043021 -1.2929 -0.028628 -0.016292 -0.0023553 0.041317 -0.41256 Deletion Peak 33 - CN values 17q11.2 chr17:29326736-29794469(probes 1325238:1325429) chr17:29419706-29711410(probes 1325278:1325400) chr17:25929929-36922838(probes 1323807:1328668) 1.7643e-10 1.9241e-09 Actual Copy Change Given -0.5024 -0.0037855 -0.76088 -0.18823 0.039619 -0.032178 0.40268 0.2631 0.034417 -0.012995 0.022746 -0.44803 -0.022606 -0.01904 -0.0047079 0.62479 -0.23765 -0.31902 -0.01106 0.44681 0 -0.057789 -0.12148 0.0558 -0.037218 -0.028355 -0.0069195 0.0051359 -0.59701 -0.0048374 -0.008613 0.001803 -0.10893 0.071678 -0.0023553 -0.051451 -1.2929 0 0.00069628 -0.016841 -0.29508 -0.011749 -0.82944 0.016705 -1.2929 -0.17076 -0.0067813 0.0027745 -0.0094046 0.024496 -0.1077 -0.35453 -0.00013862 -0.017391 -0.45067 -0.0051227 -0.21713 -0.0013858 0.18495 -0.15592 0.021254 0.04812 0.068665 0 0.054518 -0.091023 0.062365 -0.41487 -0.011473 0.075415 0.027638 0.0024969 -0.62112 -0.00041585 0.0083351 -0.084528 -0.48523 -1.0546 -1.2929 -0.97828 -0.38112 -0.14412 -0.53865 -0.85396 -0.017827 0.096412 -0.36079 -0.67214 0.053094 0.010703 -0.03245 -0.01409 -0.0044312 -0.0011087 -0.016841 -0.10289 -0.76749 -0.36795 -0.12655 -0.39953 -0.20043 1.0479 0.19801 0.23902 -0.10381 -0.02384 0.060651 -0.031632 -0.98485 0.28281 -0.044417 -0.58432 -0.011473 -0.33768 -0.023018 0.01447 -0.016875 -0.0080244 -0.010232 -0.7001 0.033972 0.1345 -0.0031128 -0.75547 0.00053936 -0.63736 -0.23325 0.054233 0.022444 -0.56019 -0.21515 -0.013677 0.082043 -0.84635 -0.0076101 -0.028901 -0.024789 0.062651 -0.0091286 0.3894 0.34193 0.1649 0.061651 -0.0026322 -0.3217 -0.041567 0.34827 -0.5939 0.13007 -0.036401 0.59782 0.40744 0.073115 0.00027728 0.037924 -0.044009 -0.11064 0.038065 -0.41311 -0.013953 -0.48386 0 0.04347 0.086811 0.072253 0.34193 0.049682 -0.53114 0.092025 0.017684 0.094032 -1.2929 0.022164 0.013492 -0.46608 0.057939 0.065226 0.071391 -0.41498 -0.071472 -0.024588 0.2338 0.2035 0.40411 -0.11404 -0.69712 0.050392 0.0114 -0.47258 -1.2929 0.00055459 0.0087528 0.00458 0 0.51037 -0.42484 0.042537 0.63664 -0.26552 -0.0041652 -0.045635 0.1795 -0.22404 0.13761 -0.7265 0.004719 -0.40097 0.24607 -0.055769 -0.14829 -0.052126 -0.56634 -0.016017 -0.056307 0.013848 -0.042652 -0.0034627 -0.04211 -0.61729 -1.2929 0.16415 -0.14541 0.18813 -0.59253 0.3348 -0.91266 0.018123 -0.12908 -0.5719 0.040625 0.010842 -0.056173 -0.0051227 0.29262 0.026057 -0.27488 -0.047666 -0.55136 -0.09644 0.079447 0.30266 -0.0059522 0.053094 -0.50235 0.073771 0.18556 0.21177 -0.63784 0.0375 -0.31753 0.0043021 0.12106 -0.028628 -0.016292 -0.0023553 0.041317 -0.27475 Deletion Peak 34 - CN values 17q25.3 chr17:80536813-80617015(probes 1350517:1350550) chr17:80560495-80608148(probes 1350534:1350546) chr17:79909332-81195210(probes 1350345:1350713) 2.9727e-06 0.00025506 Actual Copy Change Given -0.15789 -0.0037855 0.021208 -0.18823 0.042307 -0.8168 -0.76823 -0.029038 0.10891 -0.073743 0.022746 0.45581 -0.081871 -0.01904 -0.0047079 0.65479 -0.26793 0.33739 -0.01106 -0.15234 -0.25431 -0.050911 0.037359 -0.37595 -0.037218 0.0375 -0.0069195 0.0029133 -0.59701 -0.0048374 -0.008613 -0.015826 -0.10893 0.071678 0.0034687 -0.051451 0.96411 0 -0.020275 -0.016841 -0.30235 -0.011749 0.079735 -0.43246 -0.80823 -0.19244 0.006109 0.21991 -0.0094046 0.024496 -0.74652 0.28612 -0.00013862 -0.017391 -0.43854 -0.90357 -0.66809 -0.0013858 0.11712 -0.15592 0.021254 0.04812 0.068665 0 0.029108 0.043865 0.072396 -0.38906 -0.032041 -0.42648 -0.34939 0.0088385 2.0309 0.02539 0.0083351 0.2442 -0.5291 0.015587 -0.090096 -0.072675 0.48733 1.2297 0.39546 0.91655 -0.017827 0.096412 0.88826 -0.2005 0.080024 -0.0034627 -0.045364 -0.01409 -0.0044312 -0.0011087 -0.016841 -0.10289 0.60449 -0.047548 -0.18961 -0.7196 -0.18268 0.32382 0.19801 0.23902 -0.10381 -0.02384 -0.036755 -0.085457 -0.71871 0.28281 -0.044417 -0.11168 -0.31797 -0.053995 -0.023018 0.01447 -1.0221 -0.059135 -0.010232 -0.12161 1.2746 0.5156 -0.0018014 -0.2554 0.57004 -0.14605 1.035 -0.010094 0.025531 0.015139 -0.21515 -0.013677 0.56347 1.0228 -0.0076101 -0.028901 -0.015191 -0.83865 -0.0091286 1.1145 0.6148 0.26671 0.061651 -0.0026322 0.16475 -0.041567 0.12638 -0.061555 -0.75547 -0.90381 0.77733 0.40744 0.073115 0.024829 -0.9388 -0.059043 -0.10355 0.038065 0.7507 -0.00097017 -0.95203 0 0.041205 0.098851 0.062664 -0.47765 0.87807 0.059794 0.092025 -0.74455 0.038401 1.1508 0.022164 0.013492 -0.46608 -0.91582 0.064654 0.071391 -0.97345 -0.64931 -0.79277 -0.61566 -0.24569 0.40411 -0.12577 0.081755 0.050392 0.0114 -0.10749 0.020343 0.00055459 0.0087528 0.00458 -0.0094046 0.51037 0.52206 0.042537 -0.5852 -0.57299 -0.0041652 -0.070402 0.1795 0.13672 0.13761 -1.2929 0.004719 -0.14258 0.24607 -0.36363 0.44911 -0.052126 0.58417 -0.016017 -0.056307 0.024969 -0.86397 -0.0034627 0.72678 0.32044 0.97626 0.16415 -0.69721 0.18813 1.1595 0.94466 0.41061 0.024728 0.15808 0.59368 0.069255 0.010842 -0.056173 0.003191 -0.055903 0.026057 -1.2481 -0.036401 0.27789 -1.2069 0.13362 0.27111 -0.018902 -0.0085766 -0.49996 0.075209 1.1852 -0.13574 -1.2799 0.0375 0.0871 0.0043021 0.16115 -0.055364 -0.016292 -0.0023553 0.041317 -0.199 Deletion Peak 35 - CN values 18p11.32 chr18:1-5145388(probes 1350714:1353122) chr18:366044-894241(probes 1350756:1350757) chr18:367120-894561(probes 1350757:1350758) 0.24876 0.25126 Actual Copy Change Given -0.11187 0.026922 -0.30649 -0.21701 1.4745 -0.0066432 0.58919 0.31129 -0.027808 -0.62522 -0.037762 -0.45854 0.027216 -0.0049844 -0.0091286 0.61244 0.048972 -0.50598 0.040609 0.89145 -0.30944 -0.76484 -0.0099565 -1.0384 0.020063 -0.0030475 0.53749 0.0016642 0.13569 -0.00012983 -0.0061269 0.00597 0.27647 0.0062481 0.029747 -0.018216 -0.86476 -0.024661 -0.028218 0.0080567 -0.49131 0.0051359 0.0090789 0.028481 -0.51218 0.05629 -0.53297 0.0030522 -0.54975 -0.011387 -0.34315 -0.30627 0.0075 -0.89389 0.022304 0.63295 -0.26396 0.0021376 0.066515 0.026096 0.04337 0.017936 -0.22846 -0.98674 -0.0020784 0.001803 0.029184 0.1661 0.0022193 0.10848 -0.03286 -0.0070576 -0.20672 -0.051834 -0.018353 0.50186 0.095653 0.09667 0.57737 -0.902 0.026514 -0.038177 0.40094 0.40638 0.3087 -0.0023247 0.22422 -0.6009 -0.0070576 -0.43702 -0.0078863 0.0072217 0.004719 0.0040243 -0.0082731 -0.14978 -0.28057 -0.30981 -0.50162 0.7283 -0.036381 0.48199 0.022865 0.32715 0.047268 0.042449 0.51263 -0.61968 0.18223 0.40594 -0.018217 -0.28323 1.2284 -0.26853 -0.55156 -0.70415 -0.0078863 0.02525 -0.0069195 0.51769 0.73891 0.17905 -0.0020784 -0.033269 0.20166 0.41714 -0.071071 0.22623 -0.071205 -0.5408 -0.042529 -0.0099565 -0.0091286 0.070817 0.0065262 0.020623 0.018803 0 0.01419 0.50411 -0.53855 -0.044822 0.0099907 0.0049969 -0.12148 -0.0077482 -0.088242 -0.75694 -0.14952 0.029184 1.0642 -0.064643 -0.0029091 0.55762 -0.8758 -0.10867 0.18192 -0.052666 1.3129 0.0094491 0.012237 -0.045364 0.006555 -0.59517 0.016146 0.34778 -0.88264 -0.37426 0.1155 0.092895 -0.46366 0.010703 -0.031905 -0.0040162 0.049571 0.020763 0.086956 0.0913 0.46041 0.50082 -0.9016 -0.60873 -0.17866 -0.083067 1.3097 -0.38134 0.28675 -0.02562 0.043582 0.026795 -0.059807 0.00597 0.0011093 0.00097064 0.55213 -0.0080244 0.010093 -0.62655 0.77753 -0.0059522 2.285 -0.12248 -0.58559 -0.15784 -0.122 -0.0023553 0.58524 0.54559 0 -0.015666 -0.024114 0.060651 -0.011473 1.172 -0.0044312 -0.57021 0.0048579 0.62861 0.13332 -0.46483 0.45632 0.61752 -0.2051 0.021323 -0.28572 -0.90858 -0.00055444 -0.078217 -0.49277 0.18739 0.18935 -0.0063668 -0.0040162 -0.15336 0.0096926 -0.83978 -0.90942 -0.53608 -0.041431 -0.00055444 0.27679 -0.0088526 -0.89725 0.018383 -0.38475 -0.51506 1.2181 -0.59136 -0.0055375 -0.21775 0.0023581 0.60593 0.014609 -0.014916 0.00013863 -0.01106 0.60503 Deletion Peak 36 - CN values 18q23 chr18:75573485-78077248(probes 1392308:1393114) chr18:76823009-78077248(probes 1392986:1393114) chr18:76606184-78077248(probes 1392838:1393114) 0.019407 0.018971 Actual Copy Change Given 0.2513 0.031813 0.076722 -0.44753 0.7731 -0.0066432 0.63737 -0.4749 -0.078253 0 0.57969 -0.45854 0.027216 0.021463 -0.0018014 0.6277 0.048972 -0.50598 -0.030503 -0.040616 -0.60922 -0.74846 -0.0099565 2.5206 -0.49751 0.30985 -0.57249 0.0016642 0.074121 -0.010944 -0.0061269 0.00597 -0.4748 0.0062481 0.029747 0 -0.87377 -0.024661 0.00041593 0.0080567 -0.49131 0.0062481 0.97337 0.033267 -0.49141 0.16017 -0.5349 0.0030522 -0.30451 -0.011387 -0.09744 -0.30627 0.011121 0.0058309 0.022304 0.67289 -0.29592 -0.0011087 -0.6215 0.15741 0.65139 0.02806 -0.22846 -0.029175 -0.0020784 0.004719 -0.013677 0 -0.0070576 -0.8657 -0.033547 -0.011122 -0.29686 -0.0059522 -0.0024938 -0.18118 -0.39152 0.58202 1.0051 -0.88804 -0.41564 -0.035585 -0.44415 0.38066 -0.44934 -0.015849 1.3513 0.021183 -0.0070576 -0.43702 -0.022881 0.0072217 0.004719 -0.01037 -0.013205 -0.15332 0.24653 0.24247 -0.50162 -0.41586 0.41582 -0.025893 -0.042517 0.28844 0.047268 -0.060969 -0.13417 -0.011335 -0.66615 0.066802 -0.018217 -0.26288 -0.22502 -0.29715 0.27931 0.28612 -0.0078863 0.013074 -0.0037395 1.2662 -0.67159 -0.76886 -0.0020784 -0.043195 0.07972 -0.61547 -0.7869 -0.31937 -0.071205 0.06005 -0.072808 -0.71015 -0.0091286 -0.64211 0.0060733 0.020623 0.54065 0 -0.0037282 0.049398 1.6225 -0.82684 0.021603 0.0049969 -0.12148 0 2.0945 1.1126 -0.14084 -0.8548 0.12579 0.24856 0.0020805 -0.59594 0.041458 0.47821 -0.22453 -0.064911 -0.071873 0.050534 -0.47247 -0.034904 0.006555 -0.60806 -0.0084385 0.34778 0.021043 1.4977 -0.15119 0.86175 -0.449 0.010703 -0.031905 -0.0040162 0.049571 -0.9643 0.086956 0.0913 -0.16742 -0.81441 0.0067705 -0.60873 -0.70199 -0.76158 -1.0484 -0.7131 -0.10316 -0.02562 -0.47226 0.026795 0.14488 -0.0094046 0.0011093 0.0023581 0.54312 -0.0080244 0.010093 0.69596 -1.1853 -0.0059522 -0.082269 -0.15488 0.10658 -0.52215 0.65123 -0.0023553 -0.45522 0.27348 -0.73055 -0.077138 -0.024114 -0.53348 -0.010232 -0.08612 -0.033257 -0.74864 0.0048579 -0.47376 -0.5966 -0.22515 0 -0.26227 -0.11548 0.058224 -0.55457 -0.25394 -0.016017 -0.41251 1.593 -0.31001 -0.13794 0.011576 -0.0040162 -0.61441 0.00038108 0.047978 0.025671 -0.56017 0.93528 -0.0045695 -0.19575 -0.0088526 -0.050506 0.036229 0.041114 -0.09446 0.82333 -1.2543 -0.789 -0.70944 0.0023581 0.14995 0.0077783 -0.014916 0.00013863 0.72433 -0.5351 Deletion Peak 37 - CN values 19p13.3 chr19:1-390340(probes 1393115:1393142) chr19:1-293345(probes 1393115:1393116) chr19:1-3281867(probes 1393115:1393813) 1.1654e-09 1.1559e-09 Actual Copy Change Given 0.14007 0.10521 -0.22992 0.051672 0.71961 -0.77507 0.77599 1.4288 -0.020824 -0.23459 0.15367 -0.48754 -0.77473 -0.055634 0.86037 0.20855 0.07254 0.28089 0.16884 0.57969 1.2771 0.79452 2.9249 -0.015054 -0.061958 0.36936 -0.0047705 -0.0062286 0.75968 -0.013256 -0.010269 -0.0008316 0.17905 0.048404 -0.028765 -0.05442 0.19817 -0.0018014 -0.0044312 -0.033541 0.20091 -0.024114 -0.77583 0.017404 -0.076412 -0.42534 0.32447 0.00013863 -0.59166 0.039001 0.83067 -0.032041 -0.00041585 -0.86184 1.0011 0.97296 -0.56206 -0.044551 -0.051451 0.04401 0.66097 0.047978 0.082476 -0.90927 0.053806 0.050677 0.94508 -0.39642 -0.84587 -0.77303 0.068522 0.0054139 0.09101 0.015308 -0.057116 0.047978 0.34404 0.10438 0.80102 -0.1985 -0.37673 0.36559 -0.10284 0.43068 -0.99904 0.15132 0.43564 0.38949 0.8122 -0.71746 0.0076392 -0.012713 -0.013636 0.0072217 0.61661 0.2006 -0.17246 0.47733 -0.25697 -0.00097017 0.51806 1.7722 -0.38201 -0.65532 -0.49381 -0.03749 0.12741 1.0289 0.25386 0.073833 0.54312 -0.035136 0.037217 0.0913 1.7262 0.0055529 -0.0013858 -0.032041 -0.006843 0.074696 0.073546 0.39181 -0.014228 0.7134 0.43174 -0.63377 0.12623 -0.09644 0.018243 -0.0034916 0.10614 -0.065716 0.0558 -0.30016 -0.020001 -0.042381 -0.018902 0.044574 0.46468 0.57255 0.60178 -0.69667 -0.3304 -0.0015243 -0.053849 -0.04577 0.32979 -0.62035 -0.49371 -0.87829 -0.44674 -0.54361 0.10891 0.00527 -0.74586 -0.1945 0.34811 0.84297 -0.51907 -0.019314 -0.43029 -0.47976 0.056685 -0.6836 0.093621 -0.43821 0.035665 -0.61575 -0.14039 0.048262 -0.18798 1.8549 -0.71942 -0.061555 -0.34959 1.0007 0.040751 0.013772 -0.92406 -0.0501 0.7134 0.45428 -0.24448 -0.81909 0.31482 0.062223 -0.048613 0.91743 0.87767 -0.012438 0.73019 0.0084743 -0.0045695 0.0038854 -0.038578 -0.92733 0.064743 0.031436 -0.58579 -0.010094 -0.23643 -0.028492 1.3452 -0.17917 -0.728 0.0081959 0.59242 0.12152 -0.42626 0.10418 -0.45683 0.43919 -0.013815 -0.13794 -0.00069303 -0.088374 -0.015329 -0.48028 -0.41849 -1.197 0.31626 -0.34297 0.30026 -0.21094 0.12447 0.12417 0.42301 0.15628 -0.30134 -0.010906 0.01447 -0.67306 0 0.24202 0.028305 -0.272 -1.0043 -0.11978 0.35186 0.056217 0.29533 -0.76962 -0.14888 -0.19875 0.096462 0.040609 -0.015054 -0.66513 0.069382 -0.099999 0.0033299 1.7882 1.1534 -0.022881 -0.0008316 0.079303 -0.098155 Deletion Peak 38 - CN values 19q13.43 chr19:58264000-59128983(probes 1416505:1416803) chr19:58593258-58632767(probes 1416632:1416658) chr19:44220482-59128983(probes 1410711:1416803) 6.413e-12 6.4723e-12 Actual Copy Change Given -0.2064 -0.012759 -0.46577 -0.068085 -0.72818 -0.77534 0.25668 -0.12603 -0.018498 -0.63793 -0.0091286 -0.054825 -0.23655 -0.26528 -0.81794 -0.058058 0.07815 -0.092874 0.18313 -0.11221 0.54647 -0.81597 0.0023581 -0.034904 0.64818 0.27916 -0.022606 -0.0063668 -0.21515 -0.013256 -0.010269 -0.0008316 0.041458 -0.025209 -0.028765 -0.05442 -0.79836 -0.011846 -0.013264 -0.027398 -0.25962 -0.024114 -0.079476 0.017404 -0.076412 0.049318 -0.036401 0.00013863 0.28612 0.039001 0.14777 -0.058596 0.0076392 -0.084528 -0.89813 -0.061823 -0.012517 -0.044551 0.32253 -1.0131 -0.81798 0.018918 -0.73714 -0.046583 -0.93149 -0.88418 -0.94598 0.73379 -0.84923 -0.87533 0.031718 0.0023581 0.012655 0.016565 -0.1837 -0.12901 0.0084743 -0.57417 -0.1431 -0.20498 0.74765 -0.19387 -0.046312 -0.12165 0.65421 -0.65936 -0.10631 -0.43745 -0.48722 -0.57763 -0.94159 -0.012713 -0.0066432 0.00069327 -0.03054 -0.64029 0.38772 0.015708 0.57219 -0.41355 -0.35565 -0.64462 -0.77753 -0.17276 0.012237 -0.67058 -0.083465 -0.49684 0.011121 0.10979 1.2041 -0.030813 -0.97934 0.14028 -0.46451 0.0055529 -0.0013858 -0.04048 -0.0060904 -0.22588 0.0098669 -0.10657 -0.0098185 -0.063838 0.64321 -0.1294 0.12623 -0.074277 0.018243 -0.0069483 0.10614 -0.19094 -0.021373 -0.84363 -0.01037 -0.042381 -0.58853 -0.00027724 -0.10788 -0.19525 -0.59789 -0.74455 -0.58451 -0.0019399 -0.046854 -0.074492 -0.67875 -0.0067813 -0.2941 -0.89542 0.50047 0.072827 -0.79494 -0.57002 0.0558 0.88766 -0.14297 -0.072541 0.66438 -0.019314 -0.017941 -0.54925 0.042903 -0.015741 0.093621 -0.12642 -0.83922 -0.0019399 -0.14039 0.035665 0.34583 1.0082 -0.97561 0.019783 -0.022577 -0.91319 0.033995 -0.5852 -0.022744 -1.1722 -0.071205 -0.29414 0.17498 -0.10263 -0.63045 -0.53459 -0.048613 -0.026684 -0.15324 -0.012438 0.22189 0.0084743 -0.0045695 0.0038854 -0.038578 -0.46312 -0.45478 0.031436 0.35626 -0.010094 -0.21381 -0.38582 -0.65193 -0.17917 -0.10736 0.0081959 -0.11299 0.12152 0.36362 -0.42412 0.051103 -0.58147 -0.01849 0.4882 -0.00069303 -0.21886 -0.0069195 -0.27045 -0.17044 -0.3024 -0.17525 -0.26576 -0.050506 0.0027745 -0.59361 -0.85361 -0.025072 0.10518 -0.26721 -0.26274 -0.16268 0.43479 -0.0027707 0.24202 0.017396 -0.041295 -0.068127 -0.54865 0.22792 0.096234 -0.27416 -0.17429 -0.12017 0.55833 -0.73314 -0.62016 0.47632 -0.66383 -0.73608 0.6277 -0.0056971 0 0.56152 -0.029857 -0.0008316 0.079303 -0.13031 Deletion Peak 39 - CN values 21q11.2 chr21:1-23095995(probes 1453817:1458731) chr21:16322960-16440961(probes 1454428:1454511) chr21:16152747-16809692(probes 1454333:1454801) 0.11643 0.19392 Actual Copy Change Given 0.24087 -0.0068273 -0.15116 -0.021098 0.0048579 -0.0056757 -0.6479 1.2092 -0.0087146 0.01433 0.022024 0.44494 -0.011473 -0.0055375 0.0095035 0.51804 0.062794 -0.017254 0.0043021 0.53257 2.1411 0.65535 0.018243 -1.0085 0.41781 -0.39263 -0.018434 -0.010646 -0.40815 0.014339 2.0786 0.0044411 -0.10933 0.0049969 -0.015329 0.75949 0.059223 0.0029133 0.00013863 0.0051266 -0.03817 0.0011093 0.20717 -0.34458 -0.14387 0.21659 -0.56664 0 0.083776 0.0039723 0.34736 -0.34194 -0.00055444 -0.0095426 0.033408 -0.03245 0.19558 -0.014641 0.24529 -0.081202 -0.020892 0.035524 -0.01849 -0.89381 0.018523 -0.54632 0.012655 0.71396 -0.0099565 0.061222 0.63463 0.0114 0.81279 -0.0071958 -0.027698 0.056085 -0.3659 2.8605 0.57487 0.026233 0.35153 1.4357 -0.4564 1.1127 -0.028241 -0.027858 -0.082535 -0.011473 0.003191 0.2749 0.00458 -0.0096806 -0.0040162 -0.0013858 -0.0087146 0.6618 -0.14759 -0.36035 -0.19887 0.56187 0.48236 -0.47786 0.0036076 -0.14898 0.052668 0.020063 0.1643 -0.0047079 0.10439 0.18328 -0.00027867 -0.41487 0.24825 0.17437 0.059366 0.003191 0 0.0026357 -0.0087146 -1.0058 -0.035721 -0.78933 -0.0016629 0.0077783 0.61822 0.3799 0.6753 0.010424 -0.046583 -0.56736 0.24264 -0.028355 0.00597 0 -0.0033243 0.0072217 0.036088 0.010703 -0.0060904 0.043299 -0.38437 0.078582 0.028481 -0.0030475 -0.17462 -0.0040162 0.43041 -1.1696 0.070673 0.0095883 0.64139 0.30298 -0.055364 0.39147 0.012376 -0.0019399 2.3145 0.0023581 0.25339 0.0282 0.27525 0.00597 -0.014062 -0.59166 0.015028 0.27253 0.033408 -0.26384 0.036794 -0.84779 -0.5795 -1.2929 -0.10368 0.0012481 -0.43179 0.016845 0.0416 0.19969 -0.99792 -0.53622 0.84514 -0.68533 0.65903 1.3529 0.041458 0.43001 0.024969 0.84407 0.087969 -0.087049 0.43598 -0.005261 -0.0051227 0.0038854 -0.005814 0.45896 0.01344 0.53784 1.7704 0.080024 -1.2929 0.049113 0.19086 0.11506 1.8788 -0.0023553 0.83608 -0.031905 0.33739 1.2097 0.038771 -0.5294 -0.013402 0.84554 -0.32286 -1.2929 0.0020805 -0.52154 -0.4959 0.25543 -0.12564 0.047694 -0.058462 0.547 -0.32565 -0.14824 0.13362 -0.72142 -1.19 -0.1574 0.021744 0.0072217 -0.0033243 -0.11887 0.0033741 0.16565 0.020203 0.37446 0.65112 0.018523 0.60341 -0.010278 0.04259 0.26169 0.031234 -0.34578 -0.084793 0.041883 -0.011887 0.042024 0.00069327 0.8087 0.0011093 -0.017529 -0.0041546 -0.017116 -0.53226 Deletion Peak 40 - CN values 21q22.3 chr21:47427840-48129895(probes 1474113:1474213) chr21:47572498-47609222(probes 1474157:1474167) chr21:46647106-48129895(probes 1473898:1474213) 0.00082565 0.0034746 Actual Copy Change Given 0.37077 -0.0068273 -0.15116 3.6569 0.0048579 -0.0056757 0.46707 -0.12043 -0.022332 -0.0099277 0.022024 0.44494 -0.011473 -0.0055375 0.040185 0.64781 0.062794 -0.017254 -0.30075 0.53257 -0.63197 0.61679 0.018243 -0.40185 0.43125 -0.39263 0.0070826 -0.0066432 -0.32681 -0.0081537 -0.020037 0.0044411 -0.10933 0.0049969 -0.015329 0.62123 -0.92867 0.0029133 0.0072217 -0.0033243 0.018803 0.0011093 -0.46993 -0.40274 -0.41422 0.14882 -1.2657 0 0.49735 0.0039723 -0.062036 0.021463 -0.00055444 -0.0095426 0.033408 0.00013863 -0.23312 -0.057223 0.30489 -0.24131 -0.020892 0.035524 -0.01849 -0.0042929 0.018523 -0.014503 0.012655 0.71396 -0.0099565 0.061222 -0.29591 0.0114 -0.28287 -0.0071958 0.0054139 0.056085 0 -0.04577 -0.046312 0 0.30314 1.3568 -0.57822 0.24461 -0.056061 0.080056 -0.2595 -0.07401 0.032563 0.22638 0.00458 -0.0096806 -0.0040162 -0.032235 -0.0087146 0.17694 -0.18144 0.25337 -0.98273 0.044432 -0.19735 -0.53541 -0.063838 -0.049065 0.052668 -0.024798 -0.10946 -0.041567 -0.32077 1.3175 -0.025084 -0.41487 -0.60119 0.17437 -0.038011 0.003191 -1.031 0.0026357 -0.016429 -1.2929 -0.035721 -0.52469 -0.0016629 0.0077783 0.0080414 0.43665 -0.22797 -0.066522 -0.0123 -0.56736 0.24264 -0.028355 0.00597 0.51211 -0.0033243 -0.017391 -0.59361 0.010703 -0.0060904 0.029466 -0.99514 0.078582 0.028481 -0.0030475 -0.17462 -0.0040162 0.44545 0.52625 0.070673 -0.0088526 0.64139 0.30298 0.045424 0.39147 0.028341 -0.0019399 -0.248 0.0023581 0.25339 0.030732 -0.15426 -0.7777 0.038518 -0.59166 0.015028 0.27253 0.033408 -0.61892 -0.62941 -0.75288 0.50585 3.6569 -0.10368 0.0012481 -0.43179 0.076279 -0.071873 -0.32716 0.045708 0.50639 0.77599 -0.11796 -0.20237 1.3529 -0.52205 0.47444 0.024969 -0.86869 -0.93548 -0.087049 0.54735 0.014888 -0.0051227 -0.0012742 -0.005814 0.094201 0.01344 0.53784 0.35512 1.3397 0.74404 -0.8902 -0.38716 0.12358 0.29154 -0.0023553 1.3867 -0.031905 0.3235 0.28621 0.038771 -0.55096 -0.013402 0.90122 -0.32286 1.7074 0.0020805 -0.45961 -0.4959 -0.81901 -0.44091 0.047694 -0.058462 0.547 -0.32565 -0.042788 0.17121 0.35063 -0.55747 -0.15565 0.021744 -0.017254 -0.0033243 -0.11887 0.0033741 0.16565 0.020203 0.37446 0.55744 0.10555 -0.088252 0.01433 0.04259 -0.48208 -0.71358 -0.32124 -0.084793 0.4844 -0.011887 -0.28976 0.00069327 0.24591 -0.022914 -0.017529 -0.033268 -0.017116 0.0069435 Deletion Peak 41 - CN values 22q13.32 chr22:45095899-51304566(probes 1488003:1490951) chr22:49174995-49176650(probes 1490876:1490877) chr22:47227322-51304566(probes 1489292:1490951) 0.016841 0.016841 Actual Copy Change Given -0.14367 -0.0018475 0.097713 0.0073609 0.011261 -0.023155 -0.13109 0.024969 0.22839 0.055919 -0.015879 -0.46515 0.00027728 -0.01535 0.055658 -0.0073339 -0.28251 -0.089434 0.57305 -0.10421 0.038769 0.56667 0.039902 0.016985 0.61389 0.20259 0.0020805 0.015727 -0.37019 -0.011878 -0.019115 -0.2879 -0.44178 0.023145 0.029747 -0.97559 0.047694 0.0086135 -0.00055444 -0.3609 1.1738 -0.024524 -0.36798 0.039119 -1.2929 0.10445 0.019783 0.0011093 -1.2068 0.022672 -0.60686 0.29835 0.0056919 -0.027671 0.022444 -0.03749 -0.078144 -0.015329 0.1388 -0.81769 0.019013 0.10162 0.49545 -0.30263 0.049682 0.048262 0.085654 -0.41858 -0.0081624 -0.8697 0.95672 0.012097 -0.6147 0.012516 0.0351 -0.12382 0.041317 0.44376 -0.63859 -0.15272 -0.83841 -0.11717 -0.016567 -0.49542 0.1916 0.12582 0.022865 0.29072 -0.017666 -0.022058 -0.056442 -0.0098185 -0.013402 -0.036202 -0.015604 -0.73819 0.09043 -0.34631 0.22453 -0.35818 -0.1956 -0.61863 -0.80609 0.12958 0.0033299 -0.7211 0.13643 -0.054825 0.1688 -0.56624 -0.071072 0.041458 -0.033814 0.15831 0.80522 0.023286 -1.0824 0.044432 -0.024661 -0.78243 0.1676 1.6253 0.12079 -0.76458 0.58433 -0.66068 0.96083 -0.51959 0.0087528 -0.60914 -0.08094 -0.024661 0.011958 -0.88843 -0.005814 -0.029721 -0.61499 0.082332 0.0023581 -0.19862 -1.0196 -0.74655 0.027216 -0.0060904 0.56756 -1.0684 -0.154 0.35088 -0.83527 -0.0098185 0.48148 -0.72429 -0.80939 0.57916 -0.84547 0.5352 -0.36703 0.9467 -0.44749 -0.016154 -0.48879 0.14132 0.028229 -0.45426 -0.79411 -0.49444 0.062937 -0.55266 -0.61076 -0.60158 -0.5938 -1.0366 -0.41393 0.011261 0.05085 0.118 0.011261 0.11184 -0.45201 -0.62598 -0.97103 0.69577 -0.24113 0.63664 0.38171 -0.67646 0.21699 0.025671 -0.018216 0.034959 0.54383 0 -0.0062286 -0.0047079 0.0467 0.31482 0.058313 0.62115 0.48682 0.0050102 0 1.2103 0.40194 0.15562 -0.73266 0.0063871 0.67085 -0.074945 0.91824 0.23993 0.017124 -0.56326 -0.014366 1.1872 -0.32728 -0.87205 0.00097064 -0.074678 -0.25673 0.46998 0.32398 -0.58422 0.041097 -0.034495 -0.41564 -0.27392 0.020763 -0.43957 0.63226 -0.035433 0.034395 -0.065179 -0.0063668 -0.1173 0.026619 0.036935 -0.03817 0.31787 -0.075478 -0.92719 -0.29439 0.72168 -0.91394 -0.11952 0.059875 -0.47723 0.016425 0.49061 0.07053 0.97667 0.0013868 0.61589 0.066658 -0.034359 -0.0024938 -0.40716 0.49113 Deletion Peak 42 - CN values Xp21.1 chrX:30870233-34644819(probes 1503276:1504497) chrX:30870233-34033668(probes 1503276:1504495) chrX:32057483-32062301(probes 1503886:1503887) 0.014424 0.014448 Actual Copy Change Given 0.13784 0.0057847 0.42623 0.13998 -0.020275 -0.060614 0.38403 0.39845 0.050392 0.44257 -0.4193 0.32447 -0.18416 0.25809 -0.13368 -1.2929 0 -0.25467 0.058937 0.025643 0.5294 2.1385 0.12977 0.62679 0.055658 -0.1736 0.023781 0.039761 0.0098669 0.058804 0.015829 0.014749 -0.56236 0.075559 3.6569 -0.061555 -0.16424 0.029184 0.024829 -0.056712 -0.040613 0.037641 0.38138 0.25605 1.7934 0.076486 -0.0023553 0.022304 0.0075 -1.2929 -0.62927 0.44596 -0.01837 0.32866 -0.22392 0.30907 1.4378 -0.14103 -0.044551 0.13244 0.03609 -0.22121 -0.16217 -0.24107 -0.19775 -0.2319 -0.1382 0.82392 -0.13665 0.52275 0.7864 0.029466 -0.082269 0.043274 0.02539 -0.013127 -0.46504 -0.077345 1.0716 0.17166 0.90512 1.221 -0.23141 1.0769 0.37427 -0.063002 -0.55347 -0.010232 0.015447 1.0759 0.13051 -0.077878 -0.02186 0.00083195 0.015662 0.031645 0.43356 -0.020442 0.17317 0.52643 1.5554 0.94058 0.31354 -0.069511 0.0089506 -0.12043 0.71377 0.19758 -0.050581 0.5926 0.29342 -0.072274 1.1052 0.0011093 0.62752 0.0070826 0.1935 -0.031223 0.0114 1.2331 0.00041593 -0.25237 0.022444 -0.41586 0.11475 -0.16701 2.1383 0.33982 0.10235 -0.20289 0.60232 0.041317 0.047694 0.04429 -0.038306 -0.13691 -0.89687 -0.082668 -0.018902 0.01447 1.0973 -0.27882 -0.09142 0.034818 0.28453 0.31948 0.55213 0.02222 -0.23997 0.6779 0 1.667 -0.10473 0.91764 -0.20461 0.15591 0 -0.081073 1.8299 0.27159 -0.12681 -0.073076 0.46147 -0.24326 -0.081472 0.6727 -0.19362 -0.035176 0.39612 -0.075745 0.04782 -0.31365 -0.074411 -0.0027707 1.2083 -0.16064 0.019643 -0.12456 1.2662 0.65057 0.75185 -0.53835 -0.041618 -0.30392 -0.154 0.56703 0.036653 -0.090626 -0.034495 -0.15022 0.61172 0.024829 -0.0030475 0.00055459 -0.06424 0.5352 -0.037677 0.033835 0.85544 0.47924 -0.26925 0.046558 1.3499 -0.050506 0.22684 -0.00069303 0.051956 0.81747 0.094491 0.88357 0.024969 -0.24009 -0.0012473 0.22022 -0.018078 0.65424 0.0072217 0.015308 -0.11234 -0.45693 0.83726 -0.49246 0 0.23241 -0.33629 -0.21726 0.056935 0.61561 0.57558 0.32393 0.35381 -0.058435 0.0011093 0.15965 -0.072308 0.41195 -0.3617 -0.028218 0.69372 -0.34859 1.971 0.43665 -0.23728 0.87847 0.78477 0.34404 0.63865 0.7781 -0.15234 0.11518 -0.051432 1.5169 0.5555 -0.016979 -0.0047079 -0.20573 -0.065772 Deletion Peak 43 - CN values Xq21.1 chrX:76710176-77102528(probes 1519404:1519434) chrX:76722851-77070309(probes 1519409:1519433) chrX:74316005-77102528(probes 1518949:1519434) 2.7116e-16 2.8782e-15 Actual Copy Change Given 1.1504 0.0057847 0.42623 -0.60274 -0.017116 -0.072247 0.071616 0.39845 0.050392 -0.42811 -0.4193 -0.18207 -0.18416 -0.31716 -0.13368 0.012516 0 0.13942 0 0.022304 -0.58108 2.2601 0.12815 1.1175 0.7528 -0.17158 0.026514 0.017404 -0.99318 0.058804 0.028304 0.014749 0.23736 0.071879 -0.54653 -0.061555 -0.18848 0.029184 0.018663 -0.056712 -0.040613 0.037641 -1.2929 0.15681 -1.1613 0.076486 -0.99597 0.02511 -0.033477 0.085456 -0.11634 -0.3685 -0.01837 -0.38638 -0.27816 -0.39897 -0.59419 -0.14103 -0.11639 -0.3217 -1.2929 -0.22121 -0.16217 -0.25962 -0.19475 -0.2319 -0.16077 -0.37768 -0.13665 -0.68314 -0.35533 0.029466 -0.082269 0.043274 0.02539 -0.013127 -0.46504 -1.2929 -1.2929 -0.52465 0.90512 -0.077478 0.1936 -0.071923 0.63204 -0.063002 0.17618 -0.010232 0.015447 -0.68815 -0.38022 -0.077878 -0.018902 -0.0059522 0.019663 0.0016642 -0.55547 -0.018371 -0.1382 -0.61806 -0.33778 -0.44113 -0.53591 -0.13398 0.0089506 -0.13755 -1.2077 0.32221 -0.050581 -0.021921 0.29342 1.4316 -0.070536 0.016845 -0.24812 0.0070826 0.1348 -0.033494 0.0114 1.1736 0.00041593 0.2609 0.022444 -0.41586 0.07441 -0.17246 0.30521 0.68347 0.10235 -0.20289 -1.2929 0.041317 0.047694 -0.025263 -0.0020784 -0.12784 -0.10959 -0.082668 -1.0585 -0.46579 1.7971 -0.21466 -0.09142 0.034818 -0.16917 -0.466 -1.2929 0.22962 -0.23997 -0.54875 0 1.2398 -0.10736 -0.41893 -0.20461 0.15591 -0.29874 -0.11875 0.058081 -0.47763 -0.14271 -0.073076 0.40681 -0.24326 -0.081472 0.70738 -0.1945 -0.032723 -0.44566 -0.19433 0.04782 -1.1107 -0.15625 -0.0096806 -0.62004 -0.1609 0.019643 0 0.25137 -0.51187 -0.068529 0.55107 0.0040243 -0.35201 0.80034 -0.45083 0.036653 -0.090626 -0.034495 -0.15022 -0.28096 0.024829 -0.0030475 0.00055459 -0.01849 -0.9076 -0.037677 0.023566 0.068952 -0.12148 -0.57832 -0.029395 -0.67683 -0.050506 -0.54199 -0.00069303 0.051956 -0.11051 0.080363 -0.18891 0.024969 -0.26396 -0.0012473 0.22022 -0.018078 -0.49402 0.0072217 0.015308 -0.070648 0.14429 -0.2133 -1.2929 0 0.15693 0.26561 -0.21726 0.056935 -0.12688 -0.61933 -0.1504 -0.26889 -0.050506 0.0011093 -0.73249 -0.084954 -0.61629 -0.3617 -0.028218 -0.50764 -0.34389 0.81474 -0.2341 -1.2929 0.12167 -0.32001 -0.57979 0.0043021 -0.40052 -0.14153 -0.23765 -0.051432 -0.59409 0.61643 -0.016979 -0.0047079 0.46212 -0.065772 Deletion Peak 44 - CN values Xq22.3 chrX:107382193-108617052(probes 1532015:1532567) chrX:107870837-108023686(probes 1532262:1532263) chrX:107469691-108033166(probes 1532074:1532265) 0.0065312 0.041133 Actual Copy Change Given -0.56748 0.0057847 -0.42558 0.24171 -0.017116 -0.098418 0.071616 0.39845 0.041939 -0.42811 0.28311 -0.16726 -0.18416 -0.32936 -0.13368 0.012516 -0.13269 0.18041 0 0.022304 -0.5349 -0.65202 0.83982 -0.50898 0.7528 -0.16345 0.026514 0.017404 0.1661 0.058804 0.028304 0.014749 0.23736 0.071879 -0.55577 -0.061555 -0.18848 0.029184 0.018663 -0.044415 -0.040613 0.037641 -0.1755 -0.659 -0.91047 0.076486 0.0052749 0.02511 0 0.086323 -0.11634 -0.38067 -0.01837 -0.38638 -0.26095 -0.39897 -0.59419 -0.14103 -0.081738 -0.3217 0.051459 -0.22121 -0.16217 -0.25962 -0.19475 -0.2319 -0.16077 -0.416 -0.13665 -0.69369 -0.35533 0.029466 -0.082269 0.043274 0.02539 -0.013127 0.05523 -0.075211 -0.68897 -0.52465 -0.56495 -0.077478 0.1936 -0.65951 -0.52104 -0.094166 0.10073 -0.010232 0.015447 -0.69727 -0.35396 -0.077878 -0.018902 -0.0034512 0.019663 0.0016642 -0.47194 -0.018371 -0.1382 -0.2787 -0.33778 -0.55687 -0.51135 -0.13398 0.014749 -0.13083 0.36395 -0.45843 -0.39141 -0.010508 0.29342 -0.27069 -0.48974 0.016845 -0.53215 0.0070826 -0.85654 -0.033494 0.0114 -0.89901 0.00041593 -0.2726 0.022444 -0.39719 0.07441 -0.12849 -0.45276 -0.017254 0.10235 -0.20849 -0.62912 0.0027745 0.047694 -0.020687 -0.020824 -0.12784 2.0804 -0.082668 -0.032557 -0.071739 -0.55737 -0.21466 -0.09142 0.034818 -0.16917 -0.466 3.6569 -0.71292 -0.23997 -0.54875 0 -0.97502 -0.10736 -0.41893 -0.20461 0.15591 0.74157 -0.089037 -0.5711 -0.52604 -0.14271 -0.073076 -0.62787 -0.24703 -0.081472 -0.30381 -0.17639 -0.032723 -0.44566 -0.19433 0.04782 0.43193 -0.15625 -0.0096806 -0.64032 -0.15055 0.032986 0 -0.62064 -0.52859 -0.067592 -0.26143 0.023286 0.75395 -0.18658 -0.45083 -0.055769 -0.090626 -0.034495 -0.15022 -0.28739 0.024829 -0.0030475 0.00055459 -0.01849 -0.082398 -0.037677 0.021829 -0.8646 -0.12148 0.017824 -0.18792 0.050819 -0.048207 -0.54636 -0.00069303 0.051956 -0.047801 0.080363 -0.18891 -0.084852 -0.24787 -0.0012473 0.22022 -0.018078 -0.61393 0.0072217 -0.13833 -0.034768 0.14429 -0.2133 0.51839 -0.055229 0.18571 2.3283 -0.21726 0.056935 -0.11202 -0.59195 -0.1504 -0.26889 -0.050506 0.0011093 -0.28465 -0.084954 -0.61629 -0.36505 -0.028218 -0.50764 -0.33664 1.1965 -0.2341 -0.27021 -0.64019 -0.3102 -0.82529 0.0043021 -0.40052 -0.14153 -0.3326 -0.051432 -0.59789 -0.14657 -0.016979 -0.010351 0.46212 -0.065772