Unique Name Descriptor Wide Peak Limits Peak Limits Region Limits q values Residual q values after removing segments shared with higher peaks Broad or Focal Amplitude Threshold TCGA-3N-A9WB-06A-11D-A38F-01 TCGA-3N-A9WC-06A-11D-A38F-01 TCGA-3N-A9WD-06A-11D-A38F-01 TCGA-BF-AAP0-06A-11D-A396-01 TCGA-D3-A1Q1-06A-21D-A194-01 TCGA-D3-A1Q3-06A-11D-A194-01 TCGA-D3-A1Q4-06A-11D-A194-01 TCGA-D3-A1Q5-06A-11D-A194-01 TCGA-D3-A1Q6-06A-11D-A194-01 TCGA-D3-A1Q7-06A-11D-A192-01 TCGA-D3-A1Q8-06A-11D-A192-01 TCGA-D3-A1Q9-06A-11D-A192-01 TCGA-D3-A1QA-06A-11D-A194-01 TCGA-D3-A1QB-06A-11D-A192-01 TCGA-D3-A2J6-06A-11D-A192-01 TCGA-D3-A2J7-06A-11D-A194-01 TCGA-D3-A2J8-06A-11D-A194-01 TCGA-D3-A2J9-06A-11D-A194-01 TCGA-D3-A2JA-06A-11D-A194-01 TCGA-D3-A2JB-06A-11D-A194-01 TCGA-D3-A2JC-06A-11D-A192-01 TCGA-D3-A2JD-06A-11D-A192-01 TCGA-D3-A2JE-06A-11D-A371-01 TCGA-D3-A2JF-06A-11D-A194-01 TCGA-D3-A2JG-06A-11D-A194-01 TCGA-D3-A2JH-06A-11D-A194-01 TCGA-D3-A2JK-06A-11D-A194-01 TCGA-D3-A2JL-06A-11D-A194-01 TCGA-D3-A2JN-06A-11D-A194-01 TCGA-D3-A2JO-06A-11D-A194-01 TCGA-D3-A2JP-06A-11D-A192-01 TCGA-D3-A3BZ-06A-12D-A194-01 TCGA-D3-A3C1-06A-12D-A194-01 TCGA-D3-A3C3-06A-12D-A192-01 TCGA-D3-A3C6-06A-12D-A194-01 TCGA-D3-A3C7-06A-11D-A194-01 TCGA-D3-A3C8-06A-12D-A192-01 TCGA-D3-A3CB-06A-11D-A194-01 TCGA-D3-A3CC-06A-11D-A192-01 TCGA-D3-A3CE-06A-11D-A192-01 TCGA-D3-A3CF-06A-11D-A194-01 TCGA-D3-A3ML-06A-11D-A219-01 TCGA-D3-A3MO-06A-11D-A219-01 TCGA-D3-A3MR-06A-11D-A219-01 TCGA-D3-A3MU-06A-11D-A219-01 TCGA-D3-A3MV-06A-11D-A219-01 TCGA-D3-A51E-06A-11D-A25P-01 TCGA-D3-A51F-06A-11D-A25P-01 TCGA-D3-A51G-06A-11D-A25P-01 TCGA-D3-A51H-06A-12D-A25P-01 TCGA-D3-A51J-06A-11D-A25P-01 TCGA-D3-A51K-06A-11D-A25P-01 TCGA-D3-A51N-06A-11D-A25P-01 TCGA-D3-A51R-06A-11D-A25P-01 TCGA-D3-A51T-06A-11D-A25P-01 TCGA-D3-A5GL-06A-11D-A27J-01 TCGA-D3-A5GN-06A-11D-A27J-01 TCGA-D3-A5GO-06A-12D-A27J-01 TCGA-D3-A5GR-06A-11D-A27J-01 TCGA-D3-A5GS-06A-11D-A27J-01 TCGA-D3-A5GU-06A-11D-A27J-01 TCGA-D3-A8GB-06A-11D-A371-01 TCGA-D3-A8GC-06A-11D-A371-01 TCGA-D3-A8GD-06A-11D-A371-01 TCGA-D3-A8GE-06A-11D-A371-01 TCGA-D3-A8GI-06A-11D-A371-01 TCGA-D3-A8GJ-06A-11D-A371-01 TCGA-D3-A8GK-06A-11D-A371-01 TCGA-D3-A8GL-06A-11D-A371-01 TCGA-D3-A8GM-06A-11D-A371-01 TCGA-D3-A8GN-06A-11D-A371-01 TCGA-D3-A8GO-06A-11D-A371-01 TCGA-D3-A8GP-06A-11D-A371-01 TCGA-D3-A8GQ-06A-11D-A371-01 TCGA-D3-A8GR-06A-11D-A371-01 TCGA-D3-A8GS-06A-12D-A371-01 TCGA-D3-A8GV-06A-11D-A371-01 TCGA-D9-A148-06A-11D-A192-01 TCGA-D9-A149-06A-11D-A194-01 TCGA-D9-A1JW-06A-11D-A192-01 TCGA-D9-A1JX-06A-11D-A192-01 TCGA-D9-A1X3-06A-11D-A191-01 TCGA-D9-A3Z1-06A-11D-A238-01 TCGA-D9-A3Z3-06A-11D-A238-01 TCGA-D9-A4Z6-06A-12D-A25P-01 TCGA-D9-A6E9-06A-12D-A30W-01 TCGA-D9-A6EA-06A-11D-A30W-01 TCGA-D9-A6EC-06A-11D-A30W-01 TCGA-D9-A6EG-06A-12D-A32M-01 TCGA-DA-A1HV-06A-21D-A194-01 TCGA-DA-A1HW-06A-11D-A192-01 TCGA-DA-A1HY-06A-11D-A192-01 TCGA-DA-A1I0-06A-11D-A20B-01 TCGA-DA-A1I1-06A-12D-A194-01 TCGA-DA-A1I2-06A-21D-A192-01 TCGA-DA-A1I4-06A-11D-A194-01 TCGA-DA-A1I5-06A-11D-A191-01 TCGA-DA-A1I7-06A-22D-A191-01 TCGA-DA-A1I8-06A-11D-A191-01 TCGA-DA-A1IA-06A-11D-A194-01 TCGA-DA-A1IB-06A-11D-A194-01 TCGA-DA-A1IC-06A-11D-A191-01 TCGA-DA-A3F2-06A-11D-A20B-01 TCGA-DA-A3F3-06A-11D-A20B-01 TCGA-DA-A3F5-06A-11D-A20B-01 TCGA-DA-A3F8-06A-11D-A20B-01 TCGA-DA-A95V-06A-11D-A371-01 TCGA-DA-A95W-06A-11D-A371-01 TCGA-DA-A95X-06A-11D-A371-01 TCGA-DA-A95Y-06A-11D-A371-01 TCGA-DA-A95Z-06A-11D-A371-01 TCGA-EB-A44Q-06A-11D-A25P-01 TCGA-EB-A44R-06A-41D-A25P-01 TCGA-EB-A5KH-06A-11D-A27J-01 TCGA-EB-A5SG-06A-11D-A30W-01 TCGA-EB-A5SH-06A-11D-A30W-01 TCGA-EB-A5UL-06A-11D-A30W-01 TCGA-EB-A5UN-06A-11D-A30W-01 TCGA-EB-A5VV-06A-11D-A32M-01 TCGA-EB-A6L9-06A-11D-A32M-01 TCGA-EE-A17X-06A-11D-A191-01 TCGA-EE-A17Y-06A-11D-A194-01 TCGA-EE-A17Z-06A-11D-A194-01 TCGA-EE-A180-06A-11D-A219-01 TCGA-EE-A181-06A-11D-A194-01 TCGA-EE-A182-06A-11D-A194-01 TCGA-EE-A183-06A-11D-A194-01 TCGA-EE-A184-06A-11D-A194-01 TCGA-EE-A185-06A-11D-A194-01 TCGA-EE-A20B-06A-11D-A194-01 TCGA-EE-A20C-06A-11D-A194-01 TCGA-EE-A20F-06A-21D-A194-01 TCGA-EE-A20H-06A-11D-A191-01 TCGA-EE-A20I-06A-11D-A194-01 TCGA-EE-A29A-06A-12D-A194-01 TCGA-EE-A29B-06A-11D-A191-01 TCGA-EE-A29C-06A-21D-A191-01 TCGA-EE-A29D-06A-11D-A191-01 TCGA-EE-A29E-06A-11D-A191-01 TCGA-EE-A29G-06A-12D-A194-01 TCGA-EE-A29H-06A-12D-A191-01 TCGA-EE-A29L-06A-12D-A194-01 TCGA-EE-A29M-06A-11D-A194-01 TCGA-EE-A29N-06A-12D-A191-01 TCGA-EE-A29P-06A-11D-A191-01 TCGA-EE-A29Q-06A-11D-A191-01 TCGA-EE-A29R-06A-11D-A191-01 TCGA-EE-A29S-06A-11D-A191-01 TCGA-EE-A29T-06A-11D-A191-01 TCGA-EE-A29V-06A-12D-A191-01 TCGA-EE-A29W-06A-11D-A194-01 TCGA-EE-A29X-06A-11D-A194-01 TCGA-EE-A2A0-06A-11D-A194-01 TCGA-EE-A2A1-06A-11D-A191-01 TCGA-EE-A2A2-06A-11D-A194-01 TCGA-EE-A2A5-06A-11D-A191-01 TCGA-EE-A2A6-06A-11D-A191-01 TCGA-EE-A2GB-06A-11D-A191-01 TCGA-EE-A2GC-06A-11D-A191-01 TCGA-EE-A2GD-06A-11D-A194-01 TCGA-EE-A2GE-06A-11D-A194-01 TCGA-EE-A2GH-06A-11D-A194-01 TCGA-EE-A2GI-06A-11D-A194-01 TCGA-EE-A2GJ-06A-11D-A194-01 TCGA-EE-A2GK-06A-11D-A194-01 TCGA-EE-A2GL-06A-11D-A194-01 TCGA-EE-A2GM-06B-11D-A194-01 TCGA-EE-A2GN-06A-11D-A194-01 TCGA-EE-A2GO-06A-11D-A194-01 TCGA-EE-A2GP-06A-11D-A191-01 TCGA-EE-A2GR-06A-11D-A191-01 TCGA-EE-A2GS-06A-12D-A191-01 TCGA-EE-A2GT-06A-12D-A191-01 TCGA-EE-A2GU-06A-11D-A194-01 TCGA-EE-A2M5-06A-12D-A191-01 TCGA-EE-A2M6-06A-12D-A191-01 TCGA-EE-A2M7-06A-11D-A191-01 TCGA-EE-A2M8-06A-12D-A194-01 TCGA-EE-A2MC-06A-12D-A191-01 TCGA-EE-A2MD-06A-11D-A191-01 TCGA-EE-A2ME-06A-11D-A191-01 TCGA-EE-A2MF-06A-11D-A219-01 TCGA-EE-A2MG-06A-11D-A191-01 TCGA-EE-A2MH-06A-11D-A191-01 TCGA-EE-A2MI-06A-11D-A191-01 TCGA-EE-A2MJ-06A-11D-A191-01 TCGA-EE-A2MK-06A-11D-A194-01 TCGA-EE-A2ML-06A-11D-A191-01 TCGA-EE-A2MM-06A-11D-A194-01 TCGA-EE-A2MN-06A-11D-A191-01 TCGA-EE-A2MP-06A-11D-A191-01 TCGA-EE-A2MQ-06A-11D-A191-01 TCGA-EE-A2MR-06A-11D-A194-01 TCGA-EE-A2MS-06A-11D-A191-01 TCGA-EE-A2MT-06A-11D-A191-01 TCGA-EE-A2MU-06A-21D-A194-01 TCGA-EE-A3AA-06A-11D-A194-01 TCGA-EE-A3AB-06A-11D-A194-01 TCGA-EE-A3AC-06A-11D-A194-01 TCGA-EE-A3AD-06A-11D-A194-01 TCGA-EE-A3AE-06A-11D-A194-01 TCGA-EE-A3AF-06A-11D-A194-01 TCGA-EE-A3AG-06A-31D-A194-01 TCGA-EE-A3AH-06A-11D-A194-01 TCGA-EE-A3J3-06A-11D-A20B-01 TCGA-EE-A3J4-06A-11D-A20B-01 TCGA-EE-A3J5-06A-11D-A20B-01 TCGA-EE-A3J7-06A-11D-A20B-01 TCGA-EE-A3J8-06A-11D-A20B-01 TCGA-EE-A3JA-06A-11D-A20B-01 TCGA-EE-A3JB-06A-11D-A219-01 TCGA-EE-A3JD-06A-11D-A20B-01 TCGA-EE-A3JE-06A-11D-A20B-01 TCGA-EE-A3JH-06A-11D-A219-01 TCGA-EE-A3JI-06A-11D-A219-01 TCGA-ER-A193-06A-12D-A191-01 TCGA-ER-A195-06A-11D-A194-01 TCGA-ER-A197-06A-32D-A191-01 TCGA-ER-A198-06A-11D-A194-01 TCGA-ER-A199-06A-11D-A191-01 TCGA-ER-A19A-06A-21D-A191-01 TCGA-ER-A19B-06A-11D-A194-01 TCGA-ER-A19C-06A-11D-A194-01 TCGA-ER-A19D-06A-11D-A191-01 TCGA-ER-A19E-06A-11D-A191-01 TCGA-ER-A19F-06A-11D-A194-01 TCGA-ER-A19G-06A-11D-A194-01 TCGA-ER-A19H-06A-12D-A194-01 TCGA-ER-A19J-06A-11D-A194-01 TCGA-ER-A19L-06A-12D-A191-01 TCGA-ER-A19M-06A-61D-A238-01 TCGA-ER-A19N-06A-11D-A191-01 TCGA-ER-A19O-06A-11D-A191-01 TCGA-ER-A19P-06A-11D-A194-01 TCGA-ER-A19Q-06A-11D-A191-01 TCGA-ER-A19S-06A-11D-A194-01 TCGA-ER-A19T-06A-11D-A192-01 TCGA-ER-A19W-06A-41D-A238-01 TCGA-ER-A1A1-06A-11D-A191-01 TCGA-ER-A2NC-06A-11D-A191-01 TCGA-ER-A2ND-06A-11D-A194-01 TCGA-ER-A2NE-06A-21D-A194-01 TCGA-ER-A2NF-06A-11D-A192-01 TCGA-ER-A2NG-06A-11D-A194-01 TCGA-ER-A2NH-06A-11D-A194-01 TCGA-ER-A3ES-06A-11D-A20B-01 TCGA-ER-A3ET-06A-11D-A20B-01 TCGA-ER-A3EV-06A-11D-A20B-01 TCGA-ER-A3PL-06A-11D-A238-01 TCGA-ER-A42K-06A-11D-A24Q-01 TCGA-ER-A42L-06A-11D-A24Q-01 TCGA-FR-A3YN-06A-11D-A238-01 TCGA-FR-A3YO-06A-11D-A238-01 TCGA-FR-A44A-06A-11D-A24Q-01 TCGA-FR-A69P-06A-21D-A30W-01 TCGA-FR-A729-06A-11D-A34T-01 TCGA-FR-A7U8-06A-21D-A34T-01 TCGA-FR-A7U9-06A-11D-A34T-01 TCGA-FR-A7UA-06A-32D-A34T-01 TCGA-FR-A8YC-06A-11D-A371-01 TCGA-FR-A8YD-06A-11D-A371-01 TCGA-FR-A8YE-06A-11D-A371-01 TCGA-FS-A1YW-06A-11D-A191-01 TCGA-FS-A1YX-06A-11D-A191-01 TCGA-FS-A1YY-06A-11D-A191-01 TCGA-FS-A1Z0-06A-11D-A191-01 TCGA-FS-A1Z3-06A-11D-A191-01 TCGA-FS-A1Z4-06A-11D-A191-01 TCGA-FS-A1Z7-06A-11D-A191-01 TCGA-FS-A1ZA-06A-11D-A191-01 TCGA-FS-A1ZB-06A-12D-A191-01 TCGA-FS-A1ZC-06A-11D-A191-01 TCGA-FS-A1ZD-06A-11D-A191-01 TCGA-FS-A1ZE-06A-11D-A191-01 TCGA-FS-A1ZF-06A-12D-A191-01 TCGA-FS-A1ZG-06A-11D-A191-01 TCGA-FS-A1ZH-06A-11D-A191-01 TCGA-FS-A1ZJ-06A-12D-A191-01 TCGA-FS-A1ZK-06A-11D-A191-01 TCGA-FS-A1ZM-06A-12D-A191-01 TCGA-FS-A1ZP-06A-11D-A191-01 TCGA-FS-A1ZQ-06A-11D-A191-01 TCGA-FS-A1ZR-06A-21D-A191-01 TCGA-FS-A1ZS-06A-12D-A191-01 TCGA-FS-A1ZT-06A-11D-A191-01 TCGA-FS-A1ZU-06A-12D-A194-01 TCGA-FS-A1ZW-06A-12D-A191-01 TCGA-FS-A1ZY-06A-11D-A191-01 TCGA-FS-A1ZZ-06A-11D-A191-01 TCGA-FS-A4F0-06A-11D-A24Q-01 TCGA-FS-A4F2-06A-11D-A24Q-01 TCGA-FS-A4F4-06A-12D-A25P-01 TCGA-FS-A4F5-06A-11D-A25P-01 TCGA-FS-A4F8-06A-11D-A25P-01 TCGA-FS-A4F9-06A-11D-A24Q-01 TCGA-FS-A4FB-06A-11D-A25P-01 TCGA-FS-A4FC-06A-11D-A24Q-01 TCGA-FS-A4FD-06A-11D-A25P-01 TCGA-FW-A3I3-06A-11D-A219-01 TCGA-FW-A3R5-06A-11D-A238-01 TCGA-FW-A3TU-06A-11D-A238-01 TCGA-FW-A3TV-06A-11D-A238-01 TCGA-FW-A5DY-06A-11D-A30W-01 TCGA-GF-A3OT-06A-23D-A238-01 TCGA-GF-A4EO-06A-12D-A24Q-01 TCGA-GF-A6C8-06A-12D-A30W-01 TCGA-GF-A6C9-06A-11D-A30W-01 TCGA-GN-A262-06A-11D-A194-01 TCGA-GN-A264-06A-11D-A194-01 TCGA-GN-A265-06A-21D-A191-01 TCGA-GN-A266-06A-11D-A191-01 TCGA-GN-A267-06A-21D-A194-01 TCGA-GN-A268-06A-11D-A194-01 TCGA-GN-A26A-06A-11D-A192-01 TCGA-GN-A26D-06A-11D-A192-01 TCGA-GN-A4U3-06A-11D-A32M-01 TCGA-GN-A4U4-06A-11D-A32M-01 TCGA-GN-A4U7-06A-21D-A32M-01 TCGA-GN-A4U8-06A-11D-A32M-01 TCGA-GN-A4U9-06A-11D-A32M-01 TCGA-GN-A8LK-06A-11D-A371-01 TCGA-GN-A8LL-06A-21D-A371-01 TCGA-GN-A9SD-06A-11D-A400-01 TCGA-HR-A2OG-06A-21D-A191-01 TCGA-HR-A2OH-06A-11D-A191-01 TCGA-LH-A9QB-06A-11D-A38F-01 TCGA-OD-A75X-06A-12D-A32M-01 TCGA-QB-A6FS-06A-11D-A30W-01 TCGA-QB-AA9O-06A-11D-A396-01 TCGA-RP-A690-06A-11D-A30W-01 TCGA-RP-A693-06A-13D-A30W-01 TCGA-RP-A694-06A-11D-A30W-01 TCGA-RP-A695-06A-11D-A30W-01 TCGA-RP-A6K9-06A-41D-A34T-01 TCGA-W3-A824-06A-21D-A34T-01 TCGA-W3-A825-06A-11D-A34T-01 TCGA-W3-A828-06A-11D-A34T-01 TCGA-W3-AA1O-06A-11D-A38F-01 TCGA-W3-AA1Q-06A-11D-A38F-01 TCGA-W3-AA1R-06A-11D-A396-01 TCGA-W3-AA1V-06B-11D-A400-01 TCGA-W3-AA1W-06A-11D-A38F-01 TCGA-W3-AA21-06A-11D-A38F-01 TCGA-WE-A8JZ-06A-11D-A371-01 TCGA-WE-A8K1-06A-21D-A371-01 TCGA-WE-A8K5-06A-11D-A371-01 TCGA-WE-A8K6-06A-11D-A371-01 TCGA-WE-A8ZM-06A-11D-A371-01 TCGA-WE-A8ZN-06A-11D-A371-01 TCGA-WE-A8ZO-06A-11D-A371-01 TCGA-WE-A8ZQ-06A-41D-A371-01 TCGA-WE-A8ZT-06A-11D-A371-01 TCGA-WE-A8ZX-06A-11D-A371-01 TCGA-WE-A8ZY-06A-11D-A371-01 TCGA-WE-AA9Y-06A-12D-A38F-01 TCGA-WE-AAA0-06A-11D-A38F-01 TCGA-WE-AAA3-06A-11D-A38F-01 TCGA-WE-AAA4-06A-12D-A38F-01 TCGA-XV-AB01-06A-12D-A400-01 TCGA-YD-A89C-06A-11D-A371-01 TCGA-YD-A9TA-06A-11D-A396-01 TCGA-YD-A9TB-06A-12D-A400-01 TCGA-YG-AA3O-06A-11D-A38F-01 TCGA-YG-AA3P-06A-11D-A38F-01 TCGA-Z2-A8RT-06A-11D-A371-01 TCGA-Z2-AA3S-06A-11D-A396-01 TCGA-Z2-AA3V-06A-11D-A396-01 Amplification Peak 1 1p12 chr1:120229720-120523901(probes 67359:67530) chr1:120466755-120521759(probes 67494:67528) chr1:117947365-216769381(probes 66042:108983) 7.9957e-12 6.5523e-11 0: t<0.1; 1: 0.10.9 2 0 1 0 2 1 0 0 0 0 0 0 0 0 2 0 0 0 1 0 1 1 0 0 0 0 0 1 0 1 0 1 1 0 1 0 0 0 0 0 0 1 1 1 0 0 2 0 2 0 0 0 0 1 0 0 0 1 0 1 0 0 1 1 0 1 1 0 0 1 0 1 0 1 1 0 0 0 0 0 0 1 1 2 0 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 2 0 0 0 0 0 2 0 0 0 1 1 0 1 0 0 0 2 1 0 1 0 1 1 0 0 0 1 0 0 1 1 1 1 0 2 2 0 0 0 0 0 0 2 1 1 0 0 0 0 0 1 0 0 0 0 1 1 0 1 0 0 0 2 2 0 0 0 0 0 0 0 0 1 0 0 0 0 2 1 0 0 1 0 0 1 1 0 0 1 0 1 0 2 0 0 1 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 2 2 0 2 0 0 2 0 0 0 0 0 0 2 0 0 0 1 0 0 0 0 0 2 0 2 0 0 2 0 1 2 1 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 1 0 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 2 0 1 1 0 1 0 1 1 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 1 2 1 1 0 0 0 1 0 1 0 0 0 0 Amplification Peak 2 1q21.3 chr1:120523956-176036350(probes 67533:83458) chr1:154816703-154843346(probes 69870:69886) chr1:117947365-216769381(probes 66042:108983) 9.6912e-06 0.015654 0: t<0.1; 1: 0.10.9 2 1 1 0 2 1 0 0 0 1 1 0 0 1 0 0 1 1 1 0 1 1 2 0 0 0 0 1 1 0 0 1 0 0 1 0 0 0 0 1 0 1 1 1 1 1 1 0 2 0 0 2 0 1 0 0 2 1 0 1 2 0 1 1 0 1 1 2 2 1 0 1 2 2 2 0 0 0 0 1 1 0 1 1 0 1 2 1 2 0 0 0 1 1 0 1 1 2 0 2 0 2 0 2 1 0 1 0 0 1 2 0 2 0 0 1 1 1 0 1 0 1 1 2 1 2 1 2 2 1 0 0 1 1 0 2 0 1 1 1 0 2 1 0 0 0 2 1 1 0 1 0 0 1 1 0 1 1 0 1 1 1 1 2 0 1 2 2 1 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 1 0 1 1 1 2 1 0 1 1 1 0 0 1 0 1 0 1 1 0 1 0 0 0 1 0 0 0 1 0 1 0 0 0 1 1 1 1 1 0 0 0 0 0 0 2 0 1 0 0 0 1 0 0 2 0 0 0 2 1 1 0 2 0 1 2 1 0 1 1 2 2 0 1 1 0 1 1 0 0 1 0 2 2 0 1 0 1 0 2 0 2 1 0 0 2 1 0 2 2 1 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 2 0 0 0 0 1 1 0 2 1 1 1 1 1 2 2 1 1 1 1 2 0 2 0 0 0 1 1 0 0 1 1 1 1 1 0 1 1 0 1 1 0 0 0 1 2 0 1 1 0 1 1 1 1 1 1 1 1 0 0 0 0 Amplification Peak 3 1q44 chr1:245126660-247471120(probes 127456:128391) chr1:246134369-246142619(probes 128151:128153) chr1:228838052-249250621(probes 116237:128607) 9.5039e-09 1.5297e-07 0: t<0.1; 1: 0.10.9 2 0 0 0 2 1 0 0 0 1 1 0 0 1 0 0 1 1 1 0 1 1 2 0 0 0 0 1 1 1 0 1 0 0 1 1 0 0 0 1 0 1 1 1 1 1 1 0 2 0 0 2 0 1 0 1 2 1 0 1 2 0 0 1 0 1 1 2 2 1 0 1 2 1 1 0 0 0 0 1 2 0 1 1 0 1 2 1 2 0 0 1 1 1 0 1 1 1 0 2 0 2 0 2 1 0 0 0 0 2 1 0 2 0 0 1 1 1 0 1 0 1 0 2 1 2 0 2 1 2 0 0 1 1 0 2 0 1 1 1 0 2 1 0 1 0 2 0 1 0 1 0 0 1 1 0 1 2 0 1 1 1 1 2 0 0 2 2 1 0 0 1 0 2 0 0 1 0 0 0 0 1 0 0 0 1 0 2 0 2 1 1 1 1 2 1 0 1 1 1 0 0 1 1 1 0 0 1 0 1 0 0 0 1 0 0 0 2 0 1 0 0 1 1 0 1 1 1 0 0 0 0 0 1 2 0 0 0 0 0 1 0 1 0 1 1 2 1 1 1 1 2 0 1 2 1 0 0 0 2 0 0 0 1 0 1 1 0 0 0 0 2 0 0 1 0 1 2 2 0 2 1 0 0 2 2 0 2 2 2 0 0 1 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 1 2 0 2 1 1 1 1 1 2 1 0 1 1 1 2 0 2 1 0 0 1 1 0 0 1 1 2 1 1 0 1 1 0 1 0 1 0 0 1 2 0 1 1 0 1 1 1 1 1 0 1 1 0 0 0 0 Amplification Peak 4 3p13 chr3:69742923-70094803(probes 298977:299288) chr3:69961382-69983342(probes 299216:299236) chr3:66952551-77925072(probes 297098:303963) 2.2668e-13 2.2668e-13 0: t<0.1; 1: 0.10.9 0 0 0 2 0 0 0 0 0 0 0 2 2 0 0 0 1 0 1 0 2 1 0 1 2 0 0 1 0 0 0 0 1 0 0 0 0 1 1 1 0 0 0 1 0 2 2 0 0 0 0 0 0 0 0 2 1 0 1 0 0 0 0 1 0 1 0 0 0 1 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 2 0 2 0 0 2 0 0 0 0 1 2 0 0 1 0 0 0 0 2 1 1 0 0 0 0 2 0 0 1 1 2 0 0 1 0 0 0 1 0 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 2 1 1 0 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 1 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 1 1 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 2 0 0 2 1 1 0 1 0 1 1 0 1 0 0 1 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 2 0 0 0 1 2 1 0 1 0 0 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 1 0 1 1 1 2 0 0 0 0 0 2 2 0 0 1 0 0 0 0 0 0 0 0 2 0 Amplification Peak 5 4q12 chr4:55473468-55777729(probes 395137:395498) chr4:55751072-55760947(probes 395480:395485) chr4:55156864-56011888(probes 394888:395634) 0.0023937 0.0023937 0: t<0.1; 1: 0.10.9 0 0 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 2 0 0 1 0 0 1 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 2 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 2 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 1 0 0 0 1 0 0 1 0 0 0 0 1 0 0 1 0 1 2 0 0 0 1 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2 2 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 2 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 Amplification Peak 6 5p15.33 chr5:1288616-1300024(probes 467563:467565) chr5:1288662-1299328(probes 467564:467564) chr5:1-2319448(probes 467509:467936) 2.9004e-13 2.9004e-13 0: t<0.1; 1: 0.10.9 1 0 0 0 0 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 1 0 0 1 0 1 1 1 0 0 0 1 0 0 0 2 0 2 0 0 0 1 0 1 0 1 0 0 2 2 0 0 0 1 1 1 1 1 0 0 0 0 1 0 0 0 2 0 1 0 0 0 0 0 2 0 1 0 2 0 0 0 1 2 2 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 1 1 0 2 0 2 0 0 2 2 2 0 0 0 0 0 0 0 0 0 1 1 0 0 2 0 1 0 0 2 1 0 0 0 1 1 2 0 0 1 0 0 0 0 0 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 1 1 0 1 1 0 2 1 1 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 2 1 0 0 0 2 0 0 0 1 1 1 1 1 0 1 0 0 0 1 0 2 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 2 0 1 0 0 2 0 0 1 0 0 0 0 0 1 0 0 0 2 1 0 0 0 0 0 0 0 2 0 0 0 1 0 0 0 2 1 0 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 2 0 0 2 1 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 1 0 1 0 0 1 1 0 0 Amplification Peak 7 5q35.3 chr5:175337387-180915260(probes 565532:567533) chr5:177083350-177101770(probes 566047:566049) chr5:177083350-177413658(probes 566047:566052) 0.23703 0.23703 0: t<0.1; 1: 0.10.9 1 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 1 0 1 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 1 0 1 0 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 2 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 1 0 1 2 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 Amplification Peak 8 6p24.3 chr6:1977444-14532705(probes 568308:577189) chr6:8882920-9111178(probes 573289:573458) chr6:1-33412156(probes 567534:586898) 6.548e-09 6.548e-09 0: t<0.1; 1: 0.10.9 0 1 0 0 2 1 0 0 0 1 0 1 2 1 0 0 1 1 0 1 0 0 2 1 1 0 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 1 0 1 1 2 2 0 1 0 0 2 0 0 1 0 1 1 0 0 2 0 0 1 0 0 1 2 1 0 1 0 1 1 0 0 0 1 2 1 0 1 0 0 1 1 0 1 1 2 0 0 2 1 1 1 0 0 0 1 0 1 0 2 0 0 1 0 1 1 2 2 0 1 1 2 1 0 0 0 0 1 1 1 2 0 1 1 1 1 0 0 2 0 1 2 0 1 0 1 0 1 0 0 1 0 2 1 0 1 0 1 0 0 0 2 0 1 0 1 0 1 0 2 0 1 0 2 0 1 1 1 2 1 0 1 1 0 0 1 1 1 0 0 1 1 2 0 2 1 1 1 0 2 0 1 1 0 0 2 0 1 1 0 2 1 1 1 1 1 2 0 0 0 2 0 0 2 0 1 0 0 2 1 2 1 0 0 1 0 1 2 1 1 1 1 1 1 0 1 0 0 1 0 0 1 1 2 1 0 0 0 0 0 2 1 1 0 0 1 2 0 1 1 0 2 1 1 0 1 0 1 0 1 0 2 1 0 2 1 2 0 1 0 2 2 1 1 2 0 2 0 2 1 1 0 0 1 2 0 1 0 0 0 1 0 1 0 1 0 1 1 1 1 1 0 1 0 0 2 2 1 1 0 0 2 1 1 1 1 1 1 0 1 0 1 0 0 1 1 1 0 2 1 0 2 1 1 0 2 2 2 1 0 0 1 2 1 2 2 0 2 2 2 0 0 0 Amplification Peak 9 6q12 chr6:63915276-66019907(probes 602019:603020) chr6:64186751-64303209(probes 602160:602206) chr6:63915385-66023659(probes 602020:603022) 0.0066244 0.0066244 0: t<0.1; 1: 0.10.9 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 1 0 0 0 1 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 2 0 2 0 1 0 0 1 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 2 2 1 1 0 0 1 0 0 0 0 1 0 1 2 1 1 0 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0 1 1 0 1 1 1 0 0 0 1 0 2 1 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 1 1 1 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 1 1 0 0 0 0 0 0 2 0 1 0 0 0 0 0 1 0 0 2 0 2 0 0 0 Amplification Peak 10 7p22.1 chr7:1-8532843(probes 663523:666648) chr7:6288870-6352276(probes 665570:665589) chr7:1-20201885(probes 663523:672939) 0.00015162 0.00015162 0: t<0.1; 1: 0.10.9 2 1 0 1 2 1 2 1 1 0 0 1 0 0 0 0 0 1 1 0 1 2 1 0 0 0 0 1 1 0 1 1 0 0 0 1 1 1 1 0 0 1 1 1 2 0 0 0 0 0 1 0 2 2 0 0 1 0 1 2 1 0 1 1 0 1 0 1 0 0 1 2 1 1 0 0 1 1 1 0 1 0 0 1 0 1 1 1 1 1 2 1 1 0 1 1 1 2 2 1 0 2 0 0 1 0 2 1 0 0 1 1 2 2 0 0 1 1 0 1 0 1 1 1 1 0 0 0 0 1 0 0 2 0 2 0 1 2 1 0 0 2 0 1 1 2 0 0 2 0 1 0 1 0 0 0 2 2 0 0 1 1 1 2 0 1 1 1 1 1 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 1 2 0 1 2 1 1 1 2 0 1 1 1 0 1 1 1 1 1 1 1 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 2 1 0 2 0 1 1 2 0 1 0 2 1 0 1 1 0 0 0 1 0 0 0 0 0 0 1 1 1 1 2 1 1 1 1 1 1 1 1 2 1 1 0 0 0 2 1 2 0 0 1 1 2 0 0 1 0 2 2 0 1 1 0 0 0 0 1 2 0 1 0 1 1 0 0 0 0 1 0 0 0 1 0 1 0 1 0 2 0 1 1 1 1 1 1 0 1 1 2 1 1 1 1 1 0 0 1 1 1 0 0 0 0 0 0 0 2 0 1 1 1 2 1 1 1 1 2 0 0 2 0 2 0 1 0 1 0 2 1 2 1 2 1 0 0 0 Amplification Peak 11 7q34 chr7:136467935-142508606(probes 733374:736506) chr7:139475875-139562943(probes 735096:735146) chr7:114154707-159138663(probes 720963:744507) 1.6371e-07 1.6371e-07 0: t<0.1; 1: 0.10.9 0 0 0 2 2 1 0 1 1 0 0 1 2 0 0 1 0 1 1 0 1 1 1 0 1 1 0 1 1 0 1 0 2 2 1 2 1 1 1 2 0 1 1 1 2 2 1 0 0 0 1 0 1 2 0 0 1 0 1 1 1 1 1 1 0 1 0 1 0 2 1 2 1 1 1 1 2 1 1 1 1 0 0 1 0 1 1 1 1 1 1 1 2 0 2 1 1 2 1 1 0 2 0 0 2 1 0 1 0 1 2 1 0 1 0 0 1 1 0 1 0 1 0 1 1 1 1 0 0 1 0 0 2 0 2 0 1 0 1 0 2 1 1 1 1 0 0 0 2 0 1 0 1 0 0 0 2 1 0 0 1 1 1 0 0 1 1 0 1 1 0 0 1 0 0 2 1 1 0 0 0 0 0 1 0 1 2 0 1 0 0 1 1 2 0 1 1 2 0 0 1 1 1 1 1 2 1 1 0 0 1 1 0 0 0 1 0 1 1 1 0 2 1 0 2 0 1 1 2 0 1 0 2 1 1 1 2 0 0 0 1 0 1 0 0 0 1 0 2 1 1 2 1 1 1 1 0 1 1 1 2 1 0 1 0 1 0 0 2 0 0 1 1 0 2 1 1 0 0 2 0 1 1 1 0 1 0 0 1 0 1 1 2 1 0 0 0 0 1 0 0 0 1 0 2 0 1 0 2 1 1 1 1 1 1 1 0 1 0 2 1 0 2 1 1 2 0 2 1 0 0 0 0 0 0 0 0 2 0 2 0 1 2 1 1 2 1 2 1 0 2 0 1 0 1 0 1 0 2 1 0 1 2 1 1 1 0 Amplification Peak 12 8q24.21 chr8:115168887-146364022(probes 806928:825625) chr8:128653002-128809606(probes 815654:815773) chr8:98755657-146364022(probes 798088:825625) 2.8957e-05 2.8957e-05 0: t<0.1; 1: 0.10.9 0 2 1 0 2 0 2 0 1 0 0 1 0 2 2 1 0 0 1 0 1 0 2 1 0 0 0 0 2 1 2 0 1 0 2 0 0 1 1 1 0 2 1 1 1 1 1 0 1 0 2 2 1 0 0 0 1 0 1 2 1 0 0 0 0 1 2 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 2 1 1 0 1 1 1 1 1 1 0 0 0 0 0 0 0 2 1 0 1 2 0 1 2 1 1 2 1 2 0 0 0 1 0 1 1 0 2 0 0 0 0 1 0 0 0 0 0 0 1 0 1 1 1 1 0 0 0 0 2 1 1 1 0 0 0 0 0 2 0 0 0 1 1 1 0 0 0 1 1 1 1 1 0 1 0 0 0 2 1 1 0 0 0 1 0 1 0 1 0 0 0 1 1 0 1 0 0 0 1 1 0 2 1 0 2 0 1 2 1 2 0 1 0 0 0 0 0 0 0 1 1 0 0 0 2 0 0 0 1 2 2 2 1 1 2 0 2 1 2 0 0 1 1 0 2 0 0 2 1 1 0 0 1 0 0 1 0 1 2 1 1 0 2 0 1 1 1 2 0 1 1 0 0 1 2 0 0 0 0 0 2 1 1 1 1 1 1 2 0 1 0 0 1 1 2 1 0 2 0 2 1 0 0 1 0 1 0 0 0 0 0 0 1 2 0 1 1 1 1 0 2 0 0 1 1 0 1 0 1 1 2 0 1 1 0 2 1 2 1 0 0 0 1 0 2 0 0 1 2 2 1 1 1 1 1 0 0 1 2 0 1 0 2 0 1 2 0 1 1 Amplification Peak 13 11q13.3 chr11:69399650-69464717(probes 1010024:1010054) chr11:69434581-69462855(probes 1010036:1010053) chr11:66201236-81792958(probes 1008793:1017184) 1.9773e-15 1.9773e-15 0: t<0.1; 1: 0.10.9 0 0 0 0 0 0 0 0 0 0 0 2 0 0 2 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 1 0 1 1 0 0 0 1 0 1 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 2 0 0 2 0 2 0 0 0 2 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 2 0 2 2 0 0 0 0 2 0 0 2 1 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 2 0 0 1 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 2 0 0 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0 2 0 0 2 Amplification Peak 14 12q14.1 chr12:58135797-58215836(probes 1080019:1080061) chr12:58138772-58145710(probes 1080020:1080026) chr12:57466591-60450998(probes 1079748:1081557) 5.5617e-09 9.594e-07 0: t<0.1; 1: 0.10.9 0 0 0 0 2 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 2 2 0 1 0 0 0 2 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 2 1 2 0 0 0 0 1 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 1 0 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 Amplification Peak 15 12q15 chr12:69127775-69670720(probes 1086926:1087294) chr12:69590825-69624486(probes 1087254:1087272) chr12:67372407-72979226(probes 1085632:1089313) 9.9717e-11 0.00040434 0: t<0.1; 1: 0.10.9 0 0 0 0 2 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 2 2 0 1 0 0 0 2 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 2 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 2 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 2 1 0 0 0 0 0 1 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 2 0 0 2 0 0 0 1 1 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 2 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 0 0 Amplification Peak 16 13q31.3 chr13:90214960-91307433(probes 1164353:1165030) chr13:90773762-90790447(probes 1164743:1164754) chr13:90703210-91006933(probes 1164700:1164869) 0.071507 0.071507 0: t<0.1; 1: 0.10.9 0 0 1 0 1 1 0 0 1 0 0 0 0 0 2 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 1 0 0 1 0 0 1 0 1 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 2 0 0 0 2 0 1 0 0 1 0 2 1 0 0 0 1 0 1 0 0 1 0 2 0 0 0 0 0 0 0 0 2 0 1 0 0 0 1 0 0 0 0 1 1 0 1 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 1 1 0 1 0 0 1 0 1 0 0 0 0 1 0 0 1 0 1 0 1 1 1 1 0 0 0 0 1 1 1 0 1 0 1 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2 1 2 0 0 1 0 0 1 1 0 1 1 1 1 0 0 0 0 2 0 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 1 0 0 1 0 2 0 0 0 1 0 1 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 1 0 1 1 2 2 0 0 2 0 0 Amplification Peak 17 15q26.2 chr15:82580737-102531392(probes 1262631:1273706) chr15:96967336-97098673(probes 1270928:1271002) chr15:69893740-102531392(probes 1255490:1273706) 9.6912e-06 9.6912e-06 0: t<0.1; 1: 0.10.9 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 1 0 1 1 0 1 0 0 0 1 1 0 0 0 1 1 0 0 0 1 0 1 0 0 0 0 2 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 1 0 1 0 0 1 1 0 1 0 1 0 0 0 1 2 0 0 0 0 1 0 1 1 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 1 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 1 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 1 1 0 1 0 0 0 0 0 0 0 1 1 0 0 0 1 2 1 1 0 0 0 1 0 1 1 0 0 1 0 0 0 0 0 1 0 0 0 1 1 2 1 1 0 0 1 1 0 0 1 1 1 0 1 0 1 0 0 0 0 0 0 1 1 2 0 0 0 0 0 0 2 1 0 0 0 0 0 0 1 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 1 2 0 1 1 0 1 1 1 1 0 1 0 1 2 0 0 0 0 0 1 0 1 0 0 1 1 0 0 0 0 1 0 0 2 1 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 1 0 0 0 0 1 0 1 0 1 1 0 1 0 1 0 0 0 0 0 0 2 2 1 1 0 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 1 2 2 0 0 0 0 0 1 Amplification Peak 18 17q25.3 chr17:67159433-81195210(probes 1344206:1350912) chr17:78530908-78541159(probes 1350122:1350130) chr17:46897534-81195210(probes 1332935:1350912) 7.0388e-08 7.0388e-08 0: t<0.1; 1: 0.10.9 1 2 0 0 1 1 1 0 0 0 0 1 1 0 0 0 0 0 0 1 1 1 1 1 0 0 0 1 0 0 0 1 0 1 1 0 0 0 1 0 1 0 1 0 0 1 0 0 0 0 0 0 1 0 1 0 0 0 0 2 0 1 1 0 0 0 0 0 0 1 1 0 2 1 0 0 0 1 0 2 0 0 0 0 0 1 0 0 0 1 0 1 0 2 0 0 0 1 0 2 0 1 0 1 1 0 2 0 1 0 1 0 1 0 0 0 1 0 0 0 0 1 0 0 1 1 0 1 1 0 0 2 1 0 0 0 0 1 0 0 1 2 0 1 1 0 1 0 0 1 0 0 0 0 0 0 1 1 1 0 0 1 1 0 0 0 1 0 0 1 1 0 0 0 0 0 1 0 0 1 0 0 0 1 1 0 0 0 0 1 2 0 1 1 1 0 0 0 2 0 2 0 0 0 0 0 1 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 2 0 0 1 0 2 1 0 1 0 1 0 0 0 0 2 1 1 0 0 2 0 0 0 0 0 1 0 1 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2 1 0 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 2 0 1 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 1 1 0 1 0 0 0 1 2 1 1 0 0 0 0 0 0 0 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 Amplification Peak 19 20q13.33 chr20:54375868-63025520(probes 1448885:1454031) chr20:61970177-63025520(probes 1453975:1454031) chr20:61706751-63025520(probes 1453909:1454031) 0.058021 0.058021 0: t<0.1; 1: 0.10.9 1 0 1 1 2 0 0 1 0 0 0 2 0 0 0 0 0 1 1 0 1 1 1 1 1 1 0 1 1 0 1 0 1 1 1 0 0 1 1 1 0 0 0 1 1 1 0 0 2 0 1 1 0 1 0 0 1 1 1 0 1 0 1 1 0 2 0 2 1 1 0 2 1 1 0 0 0 1 0 0 1 0 0 1 0 1 2 1 0 0 1 0 1 0 1 0 0 2 0 1 0 0 0 0 1 0 0 0 0 0 2 0 0 0 0 2 1 0 0 1 0 1 0 1 0 0 1 2 0 2 0 0 1 0 1 0 0 2 2 0 0 1 0 0 1 0 1 0 1 0 1 1 0 2 0 1 2 1 0 0 1 1 1 0 0 0 1 1 1 2 0 0 0 1 1 1 1 1 1 0 0 0 1 2 0 0 0 0 0 0 1 0 0 2 1 1 1 1 2 1 2 0 2 0 1 0 1 2 0 1 1 0 0 1 1 1 0 1 0 1 0 1 0 0 1 0 1 0 2 2 1 0 0 1 0 0 1 1 0 2 1 0 0 1 0 0 0 0 2 1 0 1 1 1 2 2 0 0 0 0 1 0 0 1 0 1 0 1 1 1 0 1 1 2 0 2 0 2 1 1 0 1 0 1 2 1 0 2 0 0 1 0 1 1 0 0 0 2 1 0 0 0 0 0 1 0 1 0 1 1 0 1 1 1 1 0 0 1 0 2 1 1 1 0 1 1 1 1 2 0 0 0 0 0 0 2 0 0 0 1 0 1 1 2 0 0 2 1 0 0 2 0 1 1 0 0 1 0 1 0 0 1 2 2 0 0 0 Amplification Peak 20 22q13.2 chr22:41468899-41849552(probes 1485944:1486268) chr22:41539943-41597533(probes 1486043:1486162) chr22:37331306-48364236(probes 1484063:1490369) 1.0172e-08 1.0172e-08 0: t<0.1; 1: 0.10.9 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 1 1 1 0 1 0 0 0 0 1 0 2 1 0 0 0 1 0 0 0 1 1 0 0 1 0 1 2 0 0 2 0 0 0 0 0 2 2 2 0 1 1 0 1 2 0 0 2 1 0 0 1 0 0 0 1 0 0 0 1 0 0 1 0 1 0 0 1 1 1 0 1 1 1 1 1 0 0 0 1 1 1 1 0 0 0 1 0 1 0 0 0 2 0 0 2 1 1 1 0 0 1 0 2 1 1 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 2 2 1 0 1 1 0 0 0 1 1 0 0 1 1 2 1 0 0 0 1 1 0 0 0 1 1 1 0 0 0 0 0 0 2 1 0 0 0 1 0 0 0 0 1 0 0 0 2 0 2 1 2 0 1 1 1 0 1 1 0 1 0 0 0 1 2 0 0 1 1 0 0 0 0 0 0 0 0 0 2 2 0 0 0 1 0 0 1 1 0 0 0 0 0 2 1 0 0 0 0 1 1 0 0 1 0 0 0 0 1 1 2 1 2 0 0 1 0 2 0 0 0 2 0 0 0 1 1 0 0 2 2 0 2 1 0 2 1 0 1 0 1 1 2 1 2 0 0 1 2 1 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 1 1 0 1 1 1 1 0 0 1 0 0 1 1 0 0 1 0 0 1 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 1 1 0 1 0 0 0 0 0 1 0 0 2 0 2 1 0 1 1 0 0 0 0 Deletion Peak 1 1p36.31 chr1:1-6847369(probes 1:2218) chr1:5619360-6281666(probes 1545:1963) chr1:1-24844996(probes 1:11723) 5.1876e-09 2.6302e-07 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 1 0 0 0 0 0 1 1 0 0 1 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 1 0 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 1 0 0 1 1 1 0 0 1 0 1 0 1 0 0 0 0 0 1 1 1 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 1 1 0 0 0 0 0 1 0 0 1 1 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 1 1 1 0 0 0 0 1 0 1 0 0 0 Deletion Peak 2 1p22.1 chr1:82457075-119426205(probes 44788:66833) chr1:93289794-93313902(probes 51514:51524) chr1:76088641-119751001(probes 40953:67013) 9.7877e-07 5.7939e-06 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 1 0 0 1 0 0 0 1 1 0 0 1 1 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 1 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 1 0 0 1 1 1 0 0 0 0 1 1 1 0 0 1 0 0 1 0 0 1 1 0 0 0 0 1 0 1 0 0 0 0 0 1 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 1 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 1 1 0 0 0 0 0 1 1 0 0 0 0 1 1 0 0 0 1 0 0 1 1 0 0 1 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 1 1 1 0 0 1 0 0 0 1 0 0 0 0 1 0 1 0 0 0 0 0 0 0 1 0 1 0 1 0 0 1 0 0 0 1 0 1 0 0 0 1 1 0 1 1 0 0 Deletion Peak 3 2q37.3 chr2:239359581-242296448(probes 257766:259304) chr2:239748105-240337579(probes 258033:258202) chr2:226022553-243199373(probes 249878:259411) 3.1096e-12 3.1096e-12 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 1 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 1 1 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 1 1 1 1 0 0 1 1 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 1 0 0 0 0 1 0 0 1 0 1 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 1 0 0 0 0 0 1 1 1 0 0 0 0 1 0 0 0 0 0 1 0 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 1 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 1 0 1 1 0 0 1 0 0 0 0 0 0 1 0 1 1 0 0 0 0 0 0 0 1 1 1 0 1 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 1 1 1 0 0 0 0 1 1 1 1 0 1 0 Deletion Peak 4 3p25.1 chr3:1-62385826(probes 259412:293611) chr3:15080047-15111124(probes 267172:267183) chr3:14887911-15100814(probes 267049:267180) 0.13887 0.14037 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 1 0 0 1 1 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 1 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 1 0 1 0 1 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 1 0 1 0 Deletion Peak 5 3q13.31 chr3:116297365-118620828(probes 322519:324150) chr3:115528065-117719768(probes 321964:323595) chr3:116199804-116963206(probes 322448:323062) 2.6302e-07 2.6302e-07 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 1 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 1 1 0 0 1 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 1 0 Deletion Peak 6 4p16.3 chr4:1-6275649(probes 365369:368103) chr4:3576499-3624138(probes 366364:366373) chr4:3582639-3627605(probes 366367:366377) 0.09333 0.090504 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 1 0 1 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 0 1 1 1 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 1 1 0 0 0 1 1 1 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 1 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 1 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 1 0 1 1 1 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 1 0 1 0 0 0 0 1 0 0 0 0 1 1 1 0 0 1 0 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 1 1 0 0 1 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 1 0 1 0 0 Deletion Peak 7 4q34.3 chr4:179280062-182757119(probes 463168:464861) chr4:181521852-182082855(probes 464314:464317) chr4:180598680-191154276(probes 463652:467508) 1.3613e-15 1.3613e-15 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 1 1 0 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 1 0 1 0 1 0 0 1 1 0 0 0 0 0 1 1 0 1 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 1 1 1 0 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 1 1 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 1 1 0 0 0 1 1 0 0 0 0 1 1 0 0 0 1 0 1 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 1 1 1 1 1 0 0 1 0 1 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 1 1 0 1 1 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 1 0 1 0 1 0 1 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 1 1 0 0 0 1 0 0 0 0 1 0 0 0 1 1 1 0 0 1 0 0 0 1 0 0 0 1 0 0 1 1 0 0 1 1 0 0 1 0 0 1 1 0 0 0 0 1 0 1 0 1 0 0 0 1 0 1 0 1 1 0 Deletion Peak 8 5p15.31 chr5:1-29949316(probes 467509:484531) chr5:8447236-8465019(probes 472842:472860) chr5:7210628-13630197(probes 472006:476063) 0.011094 0.011554 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 1 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 1 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 1 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 1 0 1 1 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 1 0 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 1 0 1 1 0 0 1 0 0 1 0 1 0 0 1 0 0 0 0 0 0 1 0 1 1 0 1 1 1 0 1 1 0 0 0 0 1 1 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 0 0 0 Deletion Peak 9 5q12.1 chr5:58151172-59818245(probes 498359:499393) chr5:58260298-59818245(probes 498437:499393) chr5:58902234-58905049(probes 498916:498917) 0.0004407 0.0042341 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 0 1 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 1 0 1 0 0 1 0 1 1 0 1 0 0 0 1 1 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 1 1 0 0 0 1 0 1 0 0 0 0 1 0 0 0 0 1 0 0 1 1 1 1 1 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 1 0 1 1 0 0 1 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 1 0 1 1 0 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 1 1 0 0 1 0 0 0 0 1 0 0 1 1 1 1 0 1 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 1 0 0 1 1 0 0 0 0 0 Deletion Peak 10 5q31.3 chr5:135732466-166712758(probes 540478:559528) chr5:141000063-141022847(probes 542981:542987) chr5:113101675-180915260(probes 527247:567533) 2.2081e-08 1.2881e-07 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 1 1 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 1 0 1 1 0 1 0 0 1 0 1 0 0 0 1 0 1 0 0 0 0 1 0 0 1 0 0 0 1 0 0 1 1 1 0 0 0 0 0 0 0 1 1 0 0 1 1 0 0 0 0 0 0 1 0 0 1 1 1 0 1 1 0 1 0 1 1 1 1 0 0 0 1 1 1 0 0 0 0 0 1 0 1 0 0 1 0 0 0 1 0 1 1 0 0 0 1 1 1 1 0 0 0 0 1 0 0 0 1 1 0 0 1 0 1 1 0 0 1 0 1 0 0 1 0 1 0 1 1 0 1 0 0 1 1 1 1 1 1 1 0 0 1 0 0 0 1 0 1 0 0 1 1 0 0 0 0 0 1 0 0 1 0 0 1 0 1 1 1 0 0 0 0 1 0 1 1 0 0 1 0 0 1 1 1 0 1 0 0 0 1 0 1 0 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 1 0 1 0 0 1 0 1 0 0 1 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 1 1 0 0 1 0 1 0 0 1 0 0 1 1 0 1 0 0 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 1 0 0 1 1 0 0 0 0 0 Deletion Peak 11 6q21 chr6:67919847-171115067(probes 604241:663522) chr6:111977474-112203034(probes 628887:629047) chr6:97283784-171115067(probes 620282:663522) 1.5442e-06 0.13042 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 1 0 0 1 0 1 1 0 0 0 1 0 0 1 1 0 0 0 1 1 1 1 1 0 1 0 1 1 1 1 0 1 1 1 0 0 0 0 1 0 1 0 1 1 1 1 1 0 0 1 0 1 0 1 1 1 0 1 0 0 0 1 1 0 1 0 0 1 1 1 0 1 0 0 0 0 1 1 1 1 1 0 1 0 0 1 1 1 1 0 1 0 1 0 1 0 1 1 1 0 1 0 1 1 0 1 1 1 1 1 1 0 0 1 0 1 1 0 1 0 1 0 1 1 1 1 1 1 1 0 0 1 1 1 1 1 1 0 1 1 1 1 0 0 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 0 0 0 0 1 0 1 1 1 0 0 0 1 1 1 1 0 1 0 0 1 0 1 0 0 1 0 0 0 1 0 0 1 1 1 0 1 1 1 0 1 1 0 1 1 0 1 0 1 1 0 0 1 1 0 1 0 0 1 0 1 0 0 1 1 0 1 1 0 0 1 1 1 1 0 1 0 0 0 0 1 1 1 0 0 1 1 1 1 1 0 0 0 1 0 1 0 0 1 1 0 1 1 0 1 0 0 0 1 1 1 0 1 1 1 1 1 0 1 0 1 1 1 1 1 1 0 1 0 1 1 1 1 0 1 0 0 1 1 1 0 0 0 1 0 0 0 1 0 0 1 1 1 0 1 1 1 1 1 0 1 0 1 0 1 1 1 1 0 1 0 0 1 0 0 0 1 0 1 0 0 1 1 0 0 1 1 0 0 1 0 0 0 0 0 1 1 0 0 0 1 1 1 0 1 1 Deletion Peak 12 6q26 chr6:161693099-163153207(probes 659128:659773) chr6:161767520-163153207(probes 659169:659773) chr6:97283784-171115067(probes 620282:663522) 1.8085e-12 3.1221e-10 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 1 0 0 1 0 1 1 0 0 0 1 0 0 1 1 0 0 0 1 1 1 0 1 0 1 0 1 1 1 1 0 1 1 1 0 0 0 0 1 1 1 0 1 1 1 1 1 0 0 1 1 1 0 1 1 1 0 1 0 1 0 1 1 0 1 0 0 1 1 1 0 1 0 1 0 0 1 1 1 1 0 0 1 0 0 1 1 1 1 0 1 0 1 0 1 0 1 1 1 0 1 0 1 1 0 1 1 1 1 1 0 0 0 1 0 1 1 0 0 0 1 0 1 1 1 1 1 1 1 0 0 1 1 1 1 1 1 0 1 1 1 1 0 0 1 1 1 1 1 1 1 0 1 1 1 1 1 0 1 1 0 0 0 0 1 0 1 1 1 0 1 0 1 1 1 1 0 1 0 0 1 0 1 0 0 1 0 0 0 1 0 0 1 1 1 0 1 1 1 0 1 1 0 1 1 0 1 0 1 1 0 0 1 1 0 1 1 0 1 0 1 0 1 1 1 1 1 1 0 0 1 1 1 1 1 1 1 0 0 1 1 1 1 0 0 0 1 1 1 1 0 0 0 1 0 1 0 0 1 1 0 1 1 0 1 0 0 0 1 1 1 1 0 1 1 1 1 0 1 0 1 1 1 1 1 1 1 1 0 1 0 1 1 0 1 0 0 1 1 1 0 0 0 1 0 0 0 1 0 0 1 1 1 0 1 1 1 1 1 0 1 1 1 0 1 1 1 1 0 1 0 0 1 0 0 0 1 0 1 0 0 1 1 1 0 1 1 0 0 1 0 0 0 0 0 1 1 0 0 1 1 1 1 0 0 1 Deletion Peak 13 8p23.3 chr8:1-2793575(probes 744508:745276) chr8:1-617884(probes 744508:744508) chr8:1-2711041(probes 744508:745248) 0.02264 0.022966 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 1 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 1 1 0 1 0 0 1 0 1 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 1 1 1 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 1 1 1 0 0 0 1 1 1 0 0 1 0 1 0 1 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 1 1 1 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 1 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 1 0 0 0 0 0 1 1 0 0 1 0 0 1 0 0 0 0 0 0 1 0 1 1 0 0 0 1 0 0 1 0 1 0 Deletion Peak 14 9p23 chr9:7887952-12687261(probes 829902:831871) chr9:8310705-10619051(probes 830138:831467) chr9:1-31411798(probes 825626:844294) 4.5679e-14 0.056633 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 1 1 0 1 1 1 0 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 1 1 1 0 1 0 1 1 1 1 0 0 1 0 1 1 1 1 1 1 1 0 0 0 1 0 1 0 1 1 0 1 1 1 1 1 1 0 0 1 0 0 1 0 1 1 1 0 0 1 1 0 1 0 1 0 1 1 1 1 1 0 1 1 1 1 0 1 1 1 1 0 1 1 0 1 0 1 0 0 1 0 1 1 0 1 1 0 1 0 1 1 0 0 1 1 0 1 1 1 0 0 1 1 1 1 1 1 0 0 1 1 1 1 0 1 0 1 1 1 0 1 1 1 1 1 1 0 0 1 1 1 1 1 1 1 1 0 0 1 1 1 1 1 1 1 0 1 1 1 0 1 0 1 0 1 0 1 1 0 1 1 1 1 1 0 1 1 0 0 1 1 0 1 1 1 1 1 1 0 0 1 1 1 1 0 0 1 1 1 1 1 0 1 0 1 1 1 1 1 0 1 0 1 1 1 1 1 1 1 1 1 0 0 1 1 0 1 1 1 0 1 1 1 1 1 1 1 1 1 1 0 0 1 0 1 1 1 1 0 1 0 1 1 1 1 1 0 1 0 1 0 0 1 0 1 1 1 1 0 1 1 0 1 1 1 1 0 1 1 1 0 0 1 1 1 0 0 1 1 1 0 1 0 0 0 1 1 1 1 1 1 0 1 1 1 1 1 1 0 1 1 0 0 1 1 1 1 0 1 1 1 0 1 1 0 1 1 0 1 1 1 1 1 1 0 1 1 1 0 1 1 0 0 1 1 1 0 1 1 1 Deletion Peak 15 9p21.3 chr9:21959052-22003135(probes 839037:839054) chr9:21959052-21997722(probes 839037:839050) chr9:1-31411798(probes 825626:844294) 8.2901e-218 1.2353e-212 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 0 0 1 1 0 1 1 1 0 1 0 0 0 1 1 0 0 0 1 1 0 0 1 0 0 1 1 1 0 1 0 1 1 1 1 0 0 1 1 1 1 1 1 1 1 1 0 0 0 1 0 1 1 1 1 0 1 1 1 1 1 0 1 1 1 0 0 1 0 1 1 1 0 1 1 1 1 1 0 1 1 1 1 1 1 0 0 1 1 1 1 0 1 1 1 1 1 1 1 0 1 0 1 1 0 1 0 1 1 0 1 1 1 1 0 1 1 0 0 1 1 0 1 1 1 0 0 1 1 1 1 1 1 1 0 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 0 0 1 1 1 1 1 1 1 1 0 0 1 1 1 1 1 1 1 0 1 1 1 0 1 0 1 0 1 0 1 1 0 1 1 1 1 1 0 1 1 0 0 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 0 1 1 1 1 1 1 0 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 0 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 0 1 0 0 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 1 0 1 1 0 1 1 1 1 1 1 1 1 0 1 1 1 1 0 0 1 1 1 0 1 1 0 0 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 0 1 1 1 0 1 1 0 1 1 0 1 1 1 1 1 1 1 1 1 1 0 1 1 0 0 1 1 1 0 1 1 1 Deletion Peak 16 10p15.3 chr10:1-688423(probes 893290:893358) chr10:474043-484158(probes 893335:893336) chr10:1-861823(probes 893290:893438) 2.7625e-05 2.8015e-05 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 1 1 1 1 0 1 1 1 1 1 0 0 0 1 0 0 0 1 0 1 1 0 0 1 0 1 0 1 1 1 0 1 1 0 1 0 0 0 1 1 0 1 0 1 1 0 1 1 0 1 1 0 0 1 0 1 1 1 0 1 0 1 1 0 1 1 0 0 0 0 1 1 0 1 1 0 0 0 0 0 1 0 1 1 1 1 0 1 0 1 1 0 1 1 1 1 1 1 1 0 0 0 0 1 0 1 1 0 1 0 0 1 0 0 1 0 0 0 0 0 0 1 1 1 0 0 1 1 1 0 0 1 1 0 0 0 0 0 1 1 1 1 1 1 1 0 1 1 0 1 1 0 0 1 1 0 1 0 0 1 1 1 1 0 0 1 1 1 1 1 1 0 0 0 1 1 1 0 0 0 0 1 1 1 0 1 0 1 0 0 0 0 1 0 1 1 1 0 1 1 0 0 1 1 1 1 1 1 1 1 0 1 1 1 0 0 0 0 1 0 0 0 1 1 0 1 1 0 1 0 0 0 1 0 1 0 1 0 1 1 1 0 1 1 1 1 1 1 1 1 1 1 0 1 1 1 0 0 0 0 1 0 1 0 1 1 0 1 1 0 1 1 0 1 1 1 0 0 1 0 1 1 0 0 1 1 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 1 1 1 1 0 1 0 1 0 1 1 1 1 1 1 0 1 0 0 0 1 1 0 0 1 1 0 0 0 0 1 0 1 1 0 0 0 1 0 0 1 0 1 1 0 0 1 1 0 0 1 1 1 1 0 1 1 Deletion Peak 17 10q21.1 chr10:48433736-58123241(probes 921307:925937) chr10:52739810-54061437(probes 922851:923874) chr10:53358323-53358900(probes 923363:923364) 0.059549 0.13042 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 1 1 0 0 1 1 1 1 1 1 0 0 0 0 0 0 1 0 1 1 0 0 1 0 1 1 1 1 1 0 1 1 1 0 0 0 0 1 1 0 1 1 1 1 0 1 1 0 1 1 0 0 1 0 1 1 1 1 1 0 1 1 0 1 0 0 0 1 1 1 1 0 0 1 0 1 1 0 0 1 0 1 1 1 1 1 1 0 1 0 0 1 1 1 1 1 1 1 0 0 0 0 1 1 1 1 0 1 0 0 1 0 0 1 1 1 0 0 0 0 1 1 1 0 0 0 1 1 0 0 1 1 0 0 0 1 0 1 1 1 1 0 1 1 0 0 1 0 1 1 0 0 1 1 1 1 1 1 1 1 1 1 0 0 1 1 1 1 1 1 0 1 0 1 1 1 0 1 0 1 1 1 0 0 1 0 1 0 0 0 0 0 0 1 1 1 0 1 1 1 0 1 1 1 1 1 1 1 1 0 1 1 1 1 0 0 0 1 0 0 1 1 1 0 0 1 0 1 0 0 0 1 0 1 1 1 0 1 0 1 0 1 1 0 0 1 1 1 1 1 1 1 1 1 1 0 0 0 0 1 0 1 1 1 1 0 1 1 0 1 1 0 1 0 1 1 0 1 0 1 1 0 0 1 1 1 0 0 0 1 1 0 0 1 0 0 0 0 0 1 0 0 1 1 1 1 1 0 1 1 1 1 0 1 0 1 1 1 1 0 1 1 1 0 1 0 0 0 1 1 0 1 0 1 0 0 0 0 0 0 1 1 0 1 1 1 0 0 1 1 1 1 1 0 1 1 0 0 1 1 1 1 0 1 1 Deletion Peak 18 10q23.31 chr10:89617158-89755074(probes 945223:945424) chr10:89617402-89735907(probes 945224:945412) chr10:89187178-90580143(probes 944985:945948) 1.8476e-27 7.5779e-25 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 1 1 1 1 0 1 1 1 1 1 1 0 0 0 0 0 0 1 0 1 1 0 0 1 0 1 1 1 1 1 0 1 0 1 1 0 0 1 1 1 0 1 1 1 1 0 1 1 0 1 1 1 0 1 0 1 1 1 1 1 1 1 1 0 1 0 0 0 1 1 1 1 0 0 1 1 1 1 0 1 1 0 1 1 1 1 1 1 0 1 0 0 1 1 1 1 1 1 1 0 0 0 0 1 1 1 1 0 1 1 0 1 0 0 1 1 1 0 0 0 1 1 1 1 0 0 0 1 1 0 1 1 1 0 0 0 1 0 1 1 1 1 0 1 1 0 0 1 0 1 1 1 0 1 1 1 1 1 1 1 1 1 1 0 0 1 1 1 1 1 1 0 1 0 1 1 1 0 1 0 1 1 1 1 0 1 0 1 0 1 0 0 0 0 1 1 1 0 1 1 1 1 1 1 1 1 0 1 1 1 0 1 1 1 1 0 0 0 1 0 0 1 1 1 0 0 1 0 1 0 0 0 1 0 1 1 0 0 1 0 1 0 1 1 0 0 1 1 1 1 1 1 1 1 1 1 0 0 0 0 1 0 0 1 1 1 0 1 1 0 1 1 0 1 0 1 1 0 1 0 1 1 0 0 1 1 1 0 0 0 1 1 0 0 1 0 0 1 0 1 1 0 0 1 1 0 1 1 0 1 1 0 1 0 1 0 1 1 1 1 0 1 1 1 0 1 0 0 0 1 1 1 1 1 1 0 0 0 0 0 0 1 1 0 1 1 1 0 0 1 1 1 1 1 0 1 1 0 0 1 1 1 1 0 1 1 Deletion Peak 19 10q26.3 chr10:134944852-135093385(probes 973695:973731) chr10:135004075-135093385(probes 973721:973731) chr10:132126379-135534747(probes 973053:973777) 6.967e-08 0.00063412 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 1 1 1 1 0 1 1 1 1 1 1 0 0 0 0 0 0 1 0 1 1 0 0 1 0 1 1 1 0 1 0 1 1 1 0 0 0 1 1 1 0 1 1 1 1 0 1 1 0 1 1 1 0 1 0 1 1 1 1 1 1 1 1 0 1 1 0 0 1 1 1 1 0 0 1 1 1 1 0 0 1 0 1 1 1 1 1 1 0 1 1 0 1 1 1 1 1 1 1 0 0 0 0 1 1 1 1 0 1 1 0 1 0 0 1 1 1 0 0 0 0 1 1 1 0 0 0 1 1 0 1 1 1 0 0 0 1 0 1 1 0 1 0 1 1 0 0 1 0 1 1 1 0 1 1 1 1 1 1 1 1 1 1 0 0 1 1 1 1 1 1 0 1 1 1 1 1 0 1 1 1 1 1 1 0 1 0 1 0 1 0 0 0 0 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 0 0 1 0 1 1 1 1 0 0 1 0 1 0 0 0 1 0 1 1 1 0 1 0 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 0 0 0 0 1 0 1 1 1 1 0 1 1 0 1 0 0 1 0 1 1 0 1 0 1 1 0 0 1 1 1 0 0 0 1 1 0 0 1 0 1 0 0 1 1 1 0 1 1 0 1 1 0 1 0 0 1 0 1 0 1 1 1 1 0 1 1 1 0 1 0 0 0 1 1 1 1 1 1 0 0 0 0 0 0 1 1 0 1 1 1 0 0 1 1 1 1 1 0 1 1 0 0 1 1 1 1 0 1 1 Deletion Peak 20 11p15.5 chr11:2320967-2406244(probes 974323:974355) chr11:2352355-2363212(probes 974334:974336) chr11:2351775-2384751(probes 974333:974350) 0.22736 0.22814 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 1 0 0 1 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 1 1 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 1 0 1 0 1 0 1 1 0 1 0 0 0 1 1 0 1 0 0 0 0 0 1 0 1 0 0 1 1 0 1 0 0 1 1 0 0 1 0 0 1 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 1 0 1 1 1 0 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 1 0 0 1 0 0 0 0 1 1 1 1 1 1 0 0 1 0 1 0 0 1 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 1 0 1 0 1 0 0 1 0 1 0 0 0 1 1 1 0 0 0 0 1 0 0 0 1 1 1 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 1 1 1 0 1 1 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 1 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 1 1 1 1 0 0 1 0 0 0 0 0 0 0 0 1 1 0 0 1 0 1 0 0 0 1 0 1 0 1 1 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 1 0 0 0 1 0 0 1 1 0 0 0 0 0 0 1 0 0 Deletion Peak 21 11q23.3 chr11:113343413-117301939(probes 1036231:1039026) chr11:115497697-115501608(probes 1037766:1037767) chr11:90634837-135006516(probes 1022181:1050585) 3.6825e-28 3.6825e-28 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 1 0 1 1 0 0 1 0 1 0 1 0 1 1 1 0 0 0 1 1 1 0 1 0 0 0 1 1 1 0 0 0 0 1 1 0 0 1 0 1 1 1 0 1 1 1 0 0 0 0 0 0 0 0 0 1 0 1 1 1 1 1 1 0 1 1 0 0 1 1 0 1 1 1 0 1 1 1 0 1 0 0 1 0 1 1 1 1 1 1 0 0 1 0 0 1 0 1 1 0 0 0 1 1 0 1 0 0 1 1 1 1 0 1 1 1 0 0 0 0 1 0 1 0 1 0 0 0 1 0 1 1 1 1 0 1 1 0 0 1 1 1 1 0 1 1 1 1 1 0 0 0 0 1 1 0 1 1 0 1 1 1 1 0 0 1 0 0 0 1 0 0 1 0 1 0 0 1 1 0 0 0 0 0 1 0 1 1 1 1 0 0 1 1 1 0 1 0 1 1 0 1 0 0 0 1 1 1 1 0 0 0 1 0 1 0 1 0 1 0 0 1 1 0 1 0 0 0 1 1 1 1 0 1 1 1 1 0 0 1 1 1 1 1 1 1 1 1 0 1 1 0 1 1 0 1 0 1 0 0 0 0 0 0 1 1 0 1 1 1 0 0 1 1 0 1 1 0 1 0 1 0 0 1 1 1 1 1 0 0 1 1 1 0 0 0 1 1 0 1 0 0 0 0 0 0 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 1 0 1 1 0 1 1 0 0 1 1 0 0 0 0 0 0 1 1 0 0 1 1 1 0 1 1 1 0 0 0 1 1 1 1 1 0 0 1 1 1 1 1 0 1 Deletion Peak 22 12q23.3 chr12:76427480-133851895(probes 1091234:1124053) chr12:103976914-104163845(probes 1108059:1108220) chr12:87143826-111957254(probes 1097604:1112982) 0.00079981 0.00079729 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 1 0 1 0 0 0 0 1 1 0 0 0 1 0 0 1 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 1 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 1 0 1 1 0 0 1 1 0 0 0 1 0 0 1 0 1 0 0 1 0 1 1 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 1 0 1 0 0 1 0 0 0 0 0 1 0 1 0 1 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 1 0 0 1 1 1 0 0 0 1 0 0 1 0 0 0 0 0 1 1 0 0 1 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 0 1 1 0 0 1 0 0 Deletion Peak 23 13q34 chr13:95861243-115169878(probes 1168150:1180330) chr13:114987334-115169878(probes 1180330:1180330) chr13:114962278-115169878(probes 1180316:1180330) 0.098096 0.10152 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 1 1 0 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 1 1 1 1 0 0 0 0 1 0 0 1 0 0 1 1 0 0 0 1 1 1 0 1 0 0 1 0 0 0 0 1 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 1 0 1 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 1 0 1 0 1 0 0 1 0 0 1 0 0 1 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 1 0 1 0 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 1 0 1 1 0 0 0 Deletion Peak 24 14q23.3 chr14:66963153-67658112(probes 1205931:1206147) chr14:66970921-67652098(probes 1205933:1206143) chr14:67331182-67467170(probes 1206026:1206068) 0.046369 0.062223 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 1 0 0 1 0 1 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 1 1 1 0 0 0 0 0 0 0 1 1 0 0 0 1 0 1 0 0 0 0 1 0 1 0 0 0 1 1 1 0 0 0 1 0 0 1 0 0 0 0 1 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 1 0 1 0 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 1 0 1 0 0 1 1 1 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 1 0 1 1 1 0 1 0 0 1 1 0 0 1 0 0 1 0 1 0 1 0 0 1 0 0 0 0 0 0 1 1 0 1 1 0 1 1 0 1 0 1 0 0 1 0 1 0 1 0 0 1 0 1 1 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 1 1 0 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0 1 1 1 0 1 0 1 0 0 1 0 0 1 0 1 1 0 1 0 0 0 0 0 1 1 1 1 1 0 0 0 0 0 1 0 0 0 1 1 1 0 1 0 0 1 1 1 0 1 0 1 0 1 0 1 0 1 0 1 1 0 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 1 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 1 0 1 0 1 0 0 Deletion Peak 25 14q32.31 chr14:71578164-107349540(probes 1208486:1229490) chr14:101536028-101541633(probes 1227684:1227686) chr14:101536130-101559242(probes 1227685:1227700) 0.10277 0.16662 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 1 0 0 1 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 1 0 0 1 0 0 0 0 1 1 0 0 0 1 0 1 0 0 0 0 1 0 1 0 0 0 1 1 1 0 0 0 1 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 1 0 1 0 0 1 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 1 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 1 0 1 1 1 1 1 0 0 1 1 0 0 1 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 1 1 0 1 1 0 1 1 0 1 0 1 0 0 1 0 1 0 1 0 0 1 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0 1 1 1 0 1 0 1 0 0 1 0 0 1 0 1 1 0 1 0 0 0 0 0 1 0 1 1 1 0 0 0 0 0 1 0 0 0 1 1 1 0 1 0 0 1 1 1 0 1 0 0 0 1 1 0 0 1 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 0 1 0 0 Deletion Peak 26 15q13.3 chr15:28560817-33605300(probes 1232151:1233277) chr15:33044592-33490447(probes 1232797:1233171) chr15:1-58835316(probes 1229491:1248318) 1.0926e-08 0.010127 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 1 0 1 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 1 1 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 1 1 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 1 0 1 0 1 1 0 1 0 1 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 1 0 0 1 0 1 0 0 1 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 1 0 0 0 0 0 1 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 1 1 0 1 1 0 0 0 0 0 0 1 0 1 1 0 0 1 0 0 1 0 1 1 1 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Deletion Peak 27 15q21.1 chr15:44702831-45026122(probes 1239678:1239815) chr15:45001788-45013397(probes 1239794:1239803) chr15:1-58835316(probes 1229491:1248318) 3.6878e-13 3.632e-09 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 1 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 1 0 0 1 0 0 1 0 0 0 1 0 0 1 0 1 0 0 1 1 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 1 1 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 1 1 1 1 0 1 0 0 0 0 0 0 1 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 1 0 1 0 1 1 0 1 0 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 1 0 1 0 0 1 0 0 1 0 1 1 1 0 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 1 0 1 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1 1 0 0 0 0 0 0 1 0 1 1 0 1 1 0 0 0 0 1 1 1 0 0 1 0 1 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Deletion Peak 28 16p13.3 chr16:5144019-7780235(probes 1275363:1276846) chr16:6066397-7771745(probes 1275995:1276834) chr16:7132184-7373048(probes 1276415:1276416) 0.00017967 0.00017979 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 Deletion Peak 29 16q12.1 chr16:31804435-64977852(probes 1287495:1299380) chr16:48114144-48194022(probes 1288148:1288192) chr16:48167575-48173058(probes 1288171:1288172) 0.036923 0.32129 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 1 1 0 1 0 0 1 0 1 0 0 0 0 1 1 0 0 1 0 0 0 1 1 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 1 1 0 1 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 1 1 1 0 1 0 0 0 1 0 1 0 1 0 0 0 0 0 1 1 1 0 0 0 1 0 1 0 0 1 0 1 1 1 0 0 0 1 1 1 1 0 0 0 0 0 1 1 1 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 1 1 0 1 1 0 1 0 1 0 1 0 1 0 0 1 1 0 0 0 1 1 0 0 1 0 0 0 0 1 1 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 1 0 0 0 1 1 1 0 0 0 1 1 0 0 0 0 0 0 1 1 1 0 0 0 1 1 0 1 1 0 0 1 0 0 1 1 0 0 0 0 1 0 0 0 0 1 1 1 1 0 0 0 1 1 0 0 0 1 0 1 0 0 0 1 0 1 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 1 1 0 1 1 Deletion Peak 30 16q23.1 chr16:78098006-90354753(probes 1306678:1314204) chr16:78129058-79247026(probes 1306709:1307714) chr16:78583258-78586506(probes 1307212:1307213) 0.0077444 0.19929 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 1 1 0 1 0 0 1 0 1 0 0 0 0 1 1 0 0 1 0 0 0 1 1 1 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 1 1 1 1 1 0 0 0 1 0 0 0 1 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0 0 1 0 1 0 1 0 0 0 0 0 1 1 1 0 0 0 1 0 1 0 0 1 0 1 0 1 0 0 1 0 1 0 1 0 0 0 0 0 1 1 1 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 1 0 0 1 0 1 1 1 0 1 0 0 1 0 0 0 1 0 1 0 0 1 1 0 0 0 1 1 0 0 1 0 0 0 0 1 1 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 1 0 1 1 0 0 1 0 0 0 0 0 0 0 1 0 1 0 1 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 1 1 1 0 0 0 1 1 0 0 0 0 0 0 1 1 1 0 0 0 1 1 0 1 1 0 0 1 1 0 1 1 0 0 0 0 1 0 0 0 0 1 1 1 1 0 1 0 1 1 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 1 1 0 0 1 Deletion Peak 31 16q24.3 chr16:81745039-90354753(probes 1309675:1314204) chr16:89378665-90354753(probes 1314204:1314204) chr16:80400254-90354753(probes 1308806:1314204) 0.0002824 0.10152 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 1 1 0 1 0 1 1 0 1 0 0 0 1 1 1 0 0 1 0 0 0 1 1 1 0 1 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 1 1 0 1 1 0 0 1 0 0 0 0 0 1 1 1 1 1 0 0 0 1 0 0 1 1 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 1 1 1 0 1 0 1 0 1 0 0 1 0 1 0 1 0 0 1 0 1 0 1 0 0 0 0 0 1 1 1 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 1 0 0 1 0 1 1 1 0 1 0 0 1 0 0 0 1 0 1 0 0 1 1 0 0 0 1 1 0 0 1 0 0 0 1 1 1 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 1 0 1 0 1 1 0 0 1 0 0 0 0 0 0 0 1 0 1 0 1 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 1 0 0 1 0 0 0 1 1 1 1 0 0 1 1 0 0 0 0 0 0 0 1 1 0 0 0 1 1 0 1 0 0 0 1 1 0 1 1 0 0 0 0 1 1 0 0 0 1 1 1 1 0 1 0 1 1 0 0 0 0 0 1 0 0 0 1 1 1 0 0 0 0 1 0 1 0 0 0 1 0 0 0 1 0 1 1 0 1 1 Deletion Peak 32 17p13.3 chr17:1-1826620(probes 1314205:1314451) chr17:1-1180656(probes 1314205:1314223) chr17:1-1182165(probes 1314205:1314225) 0.21028 0.21224 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 1 1 0 0 0 0 0 0 0 0 1 1 0 1 0 0 0 1 1 0 1 0 0 1 0 0 1 1 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 0 1 1 0 0 1 0 0 1 1 1 0 1 0 0 0 0 1 0 1 0 0 0 0 0 1 1 0 0 1 1 1 0 0 0 0 1 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 1 0 0 1 0 0 0 1 1 0 1 0 0 0 0 0 1 0 1 1 1 1 1 1 0 0 0 1 1 1 0 1 0 1 1 1 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 1 1 0 0 1 1 0 0 1 0 0 0 0 0 1 0 1 1 1 1 0 1 1 0 1 0 1 0 0 0 0 0 1 1 1 0 1 0 0 1 0 1 1 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 1 1 1 0 1 1 1 0 1 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 1 1 1 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 1 1 1 0 0 1 0 0 0 1 0 1 0 1 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 1 0 0 1 1 1 0 0 0 0 0 0 1 0 1 1 1 1 0 0 0 1 0 1 0 0 0 1 Deletion Peak 33 19p13.3 chr19:1-2166394(probes 1393318:1393671) chr19:1107036-1186532(probes 1393465:1393478) chr19:1-2327989(probes 1393318:1393710) 0.0059983 0.005836 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 1 0 0 0 0 0 0 1 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 1 0 1 0 1 0 0 0 1 1 0 1 0 1 1 1 1 0 0 0 1 0 1 1 0 1 0 0 1 1 0 1 0 0 0 1 1 1 1 0 1 0 0 1 0 1 0 0 1 0 0 1 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 1 1 0 1 1 0 0 1 0 0 0 0 0 1 0 1 1 0 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 1 1 0 0 1 1 1 0 0 0 0 0 1 1 0 0 1 0 1 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 1 0 0 1 0 0 0 1 0 0 1 0 0 1 0 0 1 1 0 0 1 0 0 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 1 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 1 0 1 0 0 1 1 0 0 1 0 0 1 0 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 Deletion Peak 34 Xp21.1 chrX:30870233-32665140(probes 1503496:1504503) chrX:30870233-34033668(probes 1503496:1504717) chrX:32057877-32062998(probes 1504107:1504108) 0.052155 0.051993 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 1 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 1 0 1 1 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 1 0 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 1 0 1 0 1 0 0 0 0 1 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 1 1 1 0 0 0 0 1 1 0 1 0 0 1 1 0 0 0 0 1 1 0 0 0 1 1 1 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 1 0 0 0 1 0 0 0 1 0 1 1 0 0 0 0 0 1 0 0 1 1 1 0 Amplification Peak 1 - CN values 1p12 chr1:120229720-120523901(probes 67359:67530) chr1:120466755-120521759(probes 67494:67528) chr1:117947365-216769381(probes 66042:108983) 7.9957e-12 6.5523e-11 Actual Copy Change Given 2.7936 0.035322 0.10687 -0.0015243 1.0256 0.73697 -0.50432 0.0091705 0 0.0077783 0.008892 -0.52903 0.019865 0.013911 3.1505 -0.39642 -0.023977 -0.010508 0.41861 0.0081644 0.28311 0.26388 0.003191 -0.005261 0.044999 0.022865 0.0093777 0.14965 -0.34847 0.34725 0 0.11374 0.3799 -0.0034627 0.15831 -0.0020402 0.020203 0 -0.046989 -0.026838 0.005511 0.76849 0.70926 0.11991 0.023706 -0.13295 1.5737 -0.021017 1.3188 0.010769 0.0040243 -0.011611 -0.0015243 0.87636 0.0070222 0.013353 -0.20535 0.44059 -0.10105 0.33189 0.0094491 0.0057365 0.11242 0.12769 0.0012027 0.16367 0.32205 0.0044411 0.0081959 0.65406 0.061079 0.23581 -0.019589 0.50273 0.77291 -0.097891 0.00083195 0.0093468 0.0558 0 -0.015604 0.23272 0.29135 1.995 -0.76235 0.19086 0.92568 0.47735 0.0086135 0.0069571 0.088403 -0.0048552 -0.22305 0.0019302 0.09188 0.0077783 0.0081616 -0.44721 -0.29118 -0.10552 0.061651 0.019643 0.0020594 2.0126 -0.35658 -0.15981 2.5297 0.017404 0.0099196 -0.3356 -0.014228 0.012817 3.6569 -0.004612 -0.08416 -0.53226 0.20482 0.36444 -0.0026322 0.16685 -0.0086243 -0.3592 -0.00055444 3.6569 0.14191 0.008892 0.1283 -0.023018 0.61063 0.18132 0.0049832 0.0027652 -0.62916 0.73454 0.0015255 -0.0059522 0.54347 0.66143 0.53272 0.2035 0.022164 1.726 0.96206 -0.05037 0 0.015866 -0.38354 0.0093098 -0.31984 1.9685 0.17392 0.36282 0.010564 0.010424 0.085799 0.082909 0 0.64928 -0.018078 0.0072217 -0.13794 -0.15886 0.54488 0.72918 0.0020805 0.37413 -0.029584 0.003191 -0.5266 0.94987 3.6569 0.0054812 0.0095883 0.0073609 0.012229 -0.11665 -0.026577 -0.048521 -0.014641 0.51874 0.00083195 0.012795 -0.06712 0.01419 3.6569 0.2369 -0.5291 0.0051359 0.53311 0.014609 -0.22051 0.80014 0.2904 -0.51633 -0.0055375 0.34527 -0.08344 0.39413 -0.01354 2.9413 -0.57674 0.010146 0.27018 -0.01354 0.1658 0.033267 0.0081959 0.57541 0.048904 0.30665 0.031485 0.064448 0.015133 -0.0053992 0.061456 -0.60303 0.0040396 -0.10224 0.014939 0.14254 0.02525 0.0062481 -0.16904 1.5443 0.9469 0 1.1696 0.024829 0 3.6569 -0.014641 0 0 0.00013863 0 -0.27344 1.2719 0.075189 -0.0028377 0 0.29846 0.016845 -0.022058 -0.22773 0.0062481 -0.0011087 1.2727 0.089996 3.6569 -0.11103 0 1.1248 -0.0016796 0.25636 0.96535 0.14453 0.015168 0.11976 0.13969 -0.087579 -0.013775 0.0021882 0.011539 0.42251 0.011539 -0.20037 -0.017408 0.045863 -0.10487 -0.74529 0.05908 0.032422 -0.016841 0 0.022861 -0.0008316 0.23442 -0.63206 0.81454 0.062365 0 0.26357 0.0033299 -0.0068467 -0.26769 0.59314 0.077574 -0.03286 -0.014366 0.027216 0.59314 0.029427 0.47324 -0.15305 0.043538 0.0086135 0.017963 -0.0031859 0.59998 0.026216 0.016551 -0.53551 0.056228 0.00041593 0.78485 0.02511 0.47461 0.019083 3.6569 0.081033 0.51333 0.13806 0.013213 0.78022 -0.55186 0.42032 0.69977 0.023566 0.0066653 0.015482 -0.74386 0.016565 -0.072274 0.27019 0.31354 -0.0066432 0.025348 0.0052749 0.46365 0.00013863 -0.0081624 0.0011093 0.036794 -0.011152 0.0081959 0.51107 0.1932 0.66405 -0.0013858 -0.72123 0.060794 0.36023 -0.0066432 -0.81005 0.45037 -0.36906 0 0.018243 0.0027745 0.0081959 0.58933 0.0040243 -0.010094 0.59656 3.6569 0.36884 0.38667 -0.0020784 -0.03994 -0.0008316 0.47564 -0.30968 0.188 -0.43431 0.072005 -0.016979 -0.0052394 Amplification Peak 2 - CN values 1q21.3 chr1:120523956-176036350(probes 67533:83458) chr1:154816703-154843346(probes 69870:69886) chr1:117947365-216769381(probes 66042:108983) 9.6912e-06 0.015654 Actual Copy Change Given 1.5675 0.68823 0.10687 -0.0015243 1.0256 0.73583 0.0087528 0.0091705 0 0.72391 0.49633 -0.12542 0.019865 0.75108 0.0093098 0.0080567 0.34128 0.30937 0.41861 0.0081644 0.28311 0.67363 0.96946 -0.005261 -0.069867 0.022865 0.0093777 0.14965 0.13465 -0.14917 0 0.11374 -0.026167 -0.0034627 0.15831 -0.0020402 0.020203 0 -0.046989 0.7217 0.005511 0.76849 0.70926 0.11991 0.74689 0.56649 0.80014 -0.021017 1.3188 0.010769 0.0040243 1.3589 -0.0015243 0.87636 0.0070222 0.013353 0.96103 0.44059 -0.10105 0.33189 1.0216 0.0057365 0.11242 0.12769 0.0012027 0.16367 0.32205 1.6736 1.3632 0.26404 0.061079 0.23581 1.1305 1.0285 1.2914 -0.097891 0.00083195 0.0093468 0.0558 0.65498 0.66438 -0.36408 0.29135 0.49113 0.023145 0.19086 0.92568 0.47735 1.5759 0.0069571 0.088403 -0.0048552 0.25433 0.87747 0.09188 0.82666 0.53415 0.94058 -0.61873 3.6569 0.061651 1.4352 0.0020594 1.2742 0.23256 -0.15981 0.12138 0.017404 0.0099196 0.3799 0.97959 0.012817 1.9589 -0.004612 -0.08416 0.50134 0.20482 0.36444 -0.0026322 0.16685 -0.0086243 0.3933 0.8161 0.92728 0.14191 1.5215 0.61462 1.4369 1.3033 0.79394 0.0049832 0.0027652 0.51857 0.73454 0.0015255 1.4544 0.084065 0.66143 0.53272 0.2035 0.022164 0.92411 0.40227 -0.05037 0 0.015866 1.478 0.61009 0.29501 0.019783 0.17392 -0.35681 0.010564 0.6257 0.76753 0.082909 0.50359 0.64928 -0.018078 0.36133 0.23117 0.17362 0.54488 1.2896 0.0020805 0.39463 0.90996 1.2382 0.48053 0 0.010966 0.77993 0.0095883 0.4375 0.012229 -0.11665 0.83766 -0.048521 -0.014641 -0.00028848 0.00083195 0.012795 -0.06712 0.01419 -0.00093492 0.2369 0.018103 0.0051359 0.026795 0.53503 0.013353 0.80014 0.2904 0.54312 1.4973 0.34527 -0.08344 0.39413 0.69486 0.83976 -0.086784 0.010146 0.27018 -0.033677 0.1658 0.033267 0.44901 0.57541 0.048904 0.30665 0.031485 0.064448 0.015133 0.35986 0.061456 -0.28527 0.0040396 0.29883 0.014939 0.14254 0.02525 0.0062481 -0.18005 0.62388 0.42049 0.81825 0.66493 0.50776 0 0.011818 -0.014641 0 0 0.00013863 1.1301 0.058509 0.40318 0.075189 -0.0028377 0 0.29846 0.016845 -0.022058 1.3629 0.0062481 -0.0011087 -0.0080244 3.6569 0.59611 0.59386 0 1.1248 -0.0016796 0.25636 0.96535 0.14453 0.0043021 0.11976 0.13969 1.0508 1.6857 0.0021882 0.83058 0.42251 0.011539 0.53837 0.66161 0.045863 -0.10487 0.80803 0.05908 1.1204 1.7557 0 0.84738 -0.0008316 0.23442 0.031718 1.4999 0.062365 1.4221 0.26357 0.0033299 -0.0068467 0.93488 0.59314 0.077574 2.0654 1.6774 0.87696 -0.054058 0.029427 0.47324 -0.15305 0.043538 0.0086135 0.017963 0.73208 0.59998 0.026216 0.016551 0.012097 0.056228 0.00041593 -0.094196 1.0981 -0.0085766 0.019083 0.0026357 0.081033 0.51333 0.8353 0.013213 2.0273 0.51176 0.42032 0.69977 0.78794 0.4913 1.0512 0.98018 0.79704 0.71114 0.27019 0.31354 0.914 0.025348 1.1009 -1.0819 0.00013863 -0.0081624 0.66032 0.42772 -0.011152 0.0081959 0.51107 0.1932 0.66405 0.75365 0.77194 0.060794 0.36023 0.86414 0.094491 0.45037 0.85383 0 0.018243 0.0027745 0.70945 1.1501 0.0040243 0.42469 0.59656 0.006109 0.36884 0.38667 0.37703 0.76254 0.74956 0.47564 0.48354 0.58361 0.0066653 0.070673 -0.016979 -0.0052394 Amplification Peak 3 - CN values 1q44 chr1:245126660-247471120(probes 127456:128391) chr1:246134369-246142619(probes 128151:128153) chr1:228838052-249250621(probes 116237:128607) 9.5039e-09 1.5297e-07 Actual Copy Change Given 1.5675 -0.42946 0.085047 0.035383 1.0755 0.72524 0.0087528 0.0052749 0 0.73341 0.5149 -0.13682 0.044007 0.73808 0.0043021 0.0080567 0.38204 0.38949 0.41915 0.017544 0.28311 0.66401 0.96946 0.0075 -0.069867 0.022865 0.0093777 0.14965 0.13465 0.522 0.0024273 0.11374 -0.022881 -0.0034627 0.12686 0.77338 0.020203 0 -0.56057 0.74786 0.047836 0.76734 0.73208 0.35792 0.74689 0.59901 0.83726 0.029888 1.3489 0.012655 0.012516 1.3713 -0.0036011 0.82339 0.022164 0.20198 0.96847 0.47418 -0.10105 0.34145 1.0216 0.0057365 0.020483 0.12769 -0.01345 0.16367 0.32173 1.6368 1.4016 0.26247 0.061079 0.27395 1.1379 0.5396 0.69465 -0.13807 -0.04048 -0.36454 0.044007 0.63372 1.3929 -0.33017 0.28571 0.49113 0.019036 0.24793 0.90563 0.47735 1.5759 -0.0044312 0.088403 0.64634 0.25027 0.87747 0.09188 0.8481 0.53415 0.88726 0.06494 1.1216 0.061651 1.461 0.0020594 1.8534 0.21321 -0.15981 -0.39658 -0.00041585 0.0014392 1.3519 0.48664 -0.020961 1.7479 -0.004612 -0.0971 0.50134 0.42351 0.36444 -0.0026322 0.15846 0.0019418 0.3933 -0.0060904 2.7572 0.14191 1.5401 -0.013815 1.61 0.7862 0.96781 0.027432 -0.66689 0.52282 0.75032 -0.016296 1.5286 0.084065 0.56685 0.4958 0.2035 -0.00069303 0.92411 0.40227 -0.05037 0.22304 0.015866 1.47 -0.005261 0.23184 0.019783 0.17392 -0.37516 0.0054139 0.6257 0.76907 0.082909 0.50359 1.0527 -0.012024 0.36838 0.23117 0.17362 0.54488 1.339 0.0020805 -0.0026322 1.054 1.2805 0.48053 0.0063871 0.0034687 0.81659 0.0032149 0.93427 0.0026279 -0.11665 0.83766 0.025581 -0.014641 0.0016642 0.00083195 0.74765 -0.06712 0.01419 -0.0013017 0.2369 0.018103 1.1894 -0.058146 1.2009 0.10089 0.30553 0.11535 0.58722 1.6245 0.34527 -0.053341 0.37006 0.70304 0.47255 -0.086784 0.010146 0.53363 0.8251 0.16259 0.036088 0.012516 0.51758 0.048904 0.30665 0.024909 -0.093955 0.044999 0.3579 0.061456 -0.28527 0.0029133 3.6569 0.040847 0.14254 -0.044864 0.0038854 0.67623 0.64085 -0.074144 0.84711 0.65185 0.52188 0 0.011818 -0.014641 0 0 0.39214 1.1338 0.058509 0 0.062937 -0.0028377 0 0.29846 0.044715 0.857 -0.48449 0.44969 0.83943 1.4331 0.58291 0.61571 0.66401 0.12128 1.1248 -0.0016796 0.25636 0.97378 0.34245 0.0062481 -0.23361 -0.0064031 1.0508 -0.019314 -0.00073478 0.020483 0.37677 0.0079175 0.53186 0.77387 0.076279 0.0070826 0.065884 0.0075317 1.2259 -0.027535 -0.00078738 0.83652 -0.0008316 0.23442 1.2297 1.4999 0.062365 1.4221 0.34697 0.0033299 -0.0016231 0.92229 3.6569 0.072109 2.0654 1.6774 0.91743 -0.057065 0.012742 0.47324 -0.15305 0.0416 0.013237 0.57898 0.73435 0.53907 0.0011216 0.051004 0.012097 0.056228 0.00041593 -0.094196 -0.03681 -0.0085766 0.019083 0.0097276 0.081033 0.35381 0.9017 -0.0097856 1.951 0.54242 0.42032 0.71478 0.77252 0.52013 1.4908 0.24903 -0.86255 0.72319 0.27019 0.31354 0.914 0.025348 1.1775 0.40277 0.00013863 -0.0089906 0.68943 0.42772 0.0075464 -0.0088526 0.5142 0.1932 1.2135 0.75471 0.77763 -0.49298 0.36023 0.87887 0.094491 0.45207 0.042732 0.51072 0.018243 -0.45147 0.70945 1.1501 -0.0030475 0.40461 0.57809 0.006109 0.83153 0.39065 0.51821 0.76254 0.74556 0.0012481 0.48354 0.60178 0.026514 0.057429 0.023847 -0.0052394 Amplification Peak 4 - CN values 3p13 chr3:69742923-70094803(probes 298977:299288) chr3:69961382-69983342(probes 299216:299236) chr3:66952551-77925072(probes 297098:303963) 2.2668e-13 2.2668e-13 Actual Copy Change Given -0.00021727 0.059589 0.027863 2.3274 0.015492 -0.031769 -0.50474 -0.60197 -0.0023553 -0.13445 0.021323 3.6569 3.6569 -0.0041546 0.019503 -0.40562 0.17498 0.003191 0.33966 0.0084743 1.0277 0.69036 -0.0081624 0.40744 3.6569 0.0087528 0.0033431 0.29247 -0.32878 0.086687 -0.00090108 0 0.41396 0.010564 -0.73047 -0.79691 -0.012085 0.118 0.85008 0.55338 0.00083195 0.036229 0 0.22161 -0.017803 0.93135 0.97853 0.022304 -0.076545 -0.0038779 0.0075 -0.010118 0.030873 0 0.0014641 3.6569 0.12491 -0.0055077 0.11594 -0.0063668 -0.53622 -0.34611 0.071554 0.26355 0.0089857 0.31688 -0.0016629 -0.0056757 0.0070826 0.21972 0.1914 -0.035176 -0.63007 0.54065 0.7864 0.034536 0.0091705 0.034959 0.075559 0.0062481 0.027216 -0.22724 0.0022193 0.03369 -0.75725 3.6569 -0.11062 3.6569 -0.0026322 -0.43799 1.7231 -0.68733 0.0043021 0.00013863 -0.45725 0.48337 1.6979 -0.43214 0.021043 0.61317 0.020203 0.010285 0.0055317 -0.044783 0.90311 0.18624 0.71829 0.0029133 0.073456 -0.33929 -0.016017 3.6569 -0.66114 -0.033405 0.18117 0.61353 1.4591 0.09275 0.0043021 0.52433 0.0068044 -0.35019 0.0029133 0.34421 -0.016292 -0.020412 0.049398 0.71735 0.015168 0.19266 -0.43588 0.46142 -0.61447 0.019673 0.017544 0.011261 0 0.031014 -0.0081978 -0.1272 3.6569 0.58704 0.61854 0.042166 -0.13302 0.033831 0.56924 0 0.46041 0.02806 0.18308 0.061079 0.0056919 0.0066653 0.053338 0.036871 0.010703 -0.0059522 0.095217 0.0055529 0.083198 0.22576 0.28881 0.024829 0 0.0027235 -0.021598 0.70363 0.044079 0.35577 0.058795 0.023774 -0.0013858 0.014779 0.21513 1.8256 0 -0.097317 0.013591 0.0098669 0.0023581 0.027076 0.059937 0.045141 -0.002597 -0.03677 0.028763 -0.0077482 0.015168 -0.022332 0.23426 0.023847 -0.039937 0.081033 0.00171 0.10339 -0.20635 0 0.015168 0.0091705 0.28802 0.0020805 -0.51845 0.01817 -0.22719 0.0029133 0.11374 -0.27774 0.017477 0.27947 -0.38609 0.019721 0.043723 0.18041 0.45754 0.034818 -0.54677 0.15562 0.02942 0.013256 0.021744 0.033127 0.042024 0.0037465 0.048262 0.012795 0.4536 0.657 0.040609 0.7756 0.88526 0.010842 0.00013863 -0.00027724 0.0016642 0.13509 -0.46988 0.084354 0.021463 0.0029133 -0.52842 0.020203 0.0066653 1.3341 0.010424 -0.0024938 0.96021 0.7637 0.15412 0.04259 0.11321 -0.013677 0.37548 0.66512 0.013632 0.37545 0.056085 -0.10636 0.19086 -0.015741 0.6016 -0.00079605 -0.005261 -0.50536 0 0.17769 0.00785 -0.023429 -0.0037395 0.10374 0.013353 0.036653 -0.022381 0.0027678 0.011261 0.016425 0.015866 0.025952 0.77349 -0.31867 0.00097064 -0.70181 0.0062481 0.0072217 0.068522 -0.0030475 -0.065447 0 0.0011093 0 0.64818 0.063652 -0.036265 -0.16059 -0.016292 -0.0070576 0.0022193 0.23628 -0.012026 0.028903 -0.25802 -0.0055566 -0.0031859 0.0052749 0.93528 -0.62779 -0.049424 0.097542 0.54771 2.6467 0.43226 -0.20349 0.2298 -0.021784 0.0054139 0.040609 0.023194 0.01433 0.0033299 -0.56189 0.079314 2.2331 -0.069466 0.33499 0.13421 0.0091705 0 -0.0012473 0 -0.029359 0.015447 0.0029133 0.066515 -0.60038 0.0015255 -0.075078 -0.004557 3.6569 -0.013402 0.13091 0.075271 0.35051 0.036794 0.11932 0.78311 0.46981 0.98908 0.024829 -0.0020784 0.0049969 0.041142 0.00041593 3.6569 1.0857 0.0055529 -0.0043206 0.36608 -0.14785 -0.02658 0 0.053948 -0.34756 0.085799 -0.93592 0.076422 1.1751 -0.00097017 Amplification Peak 5 - CN values 4q12 chr4:55473468-55777729(probes 395137:395498) chr4:55751072-55760947(probes 395480:395485) chr4:55156864-56011888(probes 394888:395634) 0.0023937 0.0023937 Actual Copy Change Given 0.0020805 -0.030736 0 -0.071606 -0.56972 3.6569 -0.50764 0.031577 -0.01387 -0.0024938 0.53011 -0.033585 0.0024969 -0.0085766 -0.59019 0.017264 -0.027671 0.0090312 -0.10171 0.0066653 0.00013863 0.0072217 0.51542 -0.014002 0 0.001803 -0.0048461 0.045249 -0.35886 -0.18135 -0.01025 0.0026357 -0.0037395 0.015447 0.21795 0.0096538 -0.0033243 -0.0023553 -0.51053 0.35873 0 -0.0041546 -0.00041585 -0.13316 0.47873 -0.13817 0.0058309 -0.11339 -0.036265 -0.015604 0.0041632 3.6569 -0.28418 -0.014228 0.0015255 0 0 0.016451 -0.037082 -0.018353 0.4628 0.12849 -0.7476 -0.054434 -0.0043326 -0.17163 -0.0083005 -0.0018014 0.018103 -0.18433 -0.06056 0.41295 0.58739 -0.0049844 0.018803 0.43733 -0.016887 -0.72172 -0.25055 -0.0096806 0.021603 0.0063871 0.0026357 1.395 0.080456 -0.30098 0.21203 -0.028765 0.0049969 0.30266 0.31578 0.010703 -0.0026322 0.41245 0.0068044 0.0069435 0.0069435 0.025531 0.00597 -0.01647 0.1155 0.022585 0.0070614 -0.024348 0.86831 -0.19118 3.2155 -0.015604 -0.85334 0.096961 -0.021443 -0.012576 -0.33871 0.90007 0 0.58991 -0.23462 0.0042492 0.00069327 0.031488 0.023145 -0.34549 0.0015255 -0.33768 0.39098 0.0054139 0.0048579 0.61643 0.042399 -0.22034 -0.46743 0.13819 -0.016515 0 -0.0056757 0.016565 -0.49673 1.3302 0.0075 0.42267 -0.063843 -0.023429 -0.20037 -0.052666 0.51376 0.020903 -0.01857 0.013353 -0.28822 0.026514 -0.33502 0.037719 0 0 0.05912 -0.11339 0.013632 0.55957 0.027076 0.012097 0.054629 -0.14528 0.34958 -0.0076101 -0.0051227 -0.0016629 -0.5791 -0.0084385 -0.53292 0.38982 0.017824 0.0079849 -0.40462 0.030169 -0.13704 -0.19178 -0.025346 0.013682 0.0011093 -0.005814 0.0022193 0.010146 0.010395 0.038771 0.0087882 0.13391 0.018803 -0.0027707 -0.8895 -0.067324 0.24124 -0.69767 0.11213 -0.50846 0.026092 0 0.12167 -0.054727 0.032052 0.86037 -0.064432 0.0011093 -0.39685 0.017404 0.30282 -0.022107 -0.072274 0.41362 -0.38967 0.2648 1.6924 -0.07006 -0.10039 0 0.73116 -0.28501 0.0015255 0.53415 -0.0059967 0.004051 -0.031359 1.9169 -0.056981 -0.55317 -0.48565 0.018383 -0.033299 -0.0045695 0.014609 0.026795 -0.027808 -0.005814 0.0013868 0 -0.0030475 -0.11848 0.0096527 -0.04726 0.011679 -0.0037395 0.53532 0.027638 0.010564 -0.14939 -0.46121 0.00069327 1.0057 1.3044 0.1658 0.012097 -0.1366 0.47301 0.088429 -0.075612 0.018383 -0.019314 -0.83092 0.013632 0.038347 0.71143 -0.0077482 -0.0061931 -0.0015243 0.44901 -0.0084385 -0.37524 0.018663 -0.16625 -0.023429 -0.29879 0.0033122 0.0040243 -0.010784 0.010266 0.019503 0.020763 0.0093098 3.3147 3.1515 1.1305 0.00097064 0.12152 -0.0037395 -0.0033243 0.067232 0.62151 0.064225 0.0055529 0.01419 -0.005814 -0.51455 -0.013402 0.42704 -0.17924 -0.021373 0.038913 -0.0041546 0.00027728 -0.010922 -0.010784 -0.37736 -0.016567 0.00069327 -0.013728 0.15696 -0.6236 -0.18949 0.057939 0.17242 -0.058058 -0.50038 0.0054139 0.15621 -0.010578 0.43311 -0.37324 0.018292 0.027638 0.0076392 0.024788 0.28406 0.013006 0.1344 0.017144 -0.0078863 0.03214 0.02511 0.0095883 -0.55347 -0.011611 -0.0013858 0.0042231 -0.32754 0.028106 -0.0081624 -0.52379 0.020259 0 0.051245 -0.16905 0.5631 -0.0077482 0.020203 -0.34125 0.013772 -0.029311 -0.0031859 0.035524 -0.00055444 -0.013953 0.18619 -0.0023553 -0.50815 0.052525 -0.19236 0.0026079 0.00013863 0.037217 -0.044554 0.00060702 -0.46131 0.51176 -0.26708 0.030169 -0.69351 0.020903 -0.039584 Amplification Peak 6 - CN values 5p15.33 chr5:1288616-1300024(probes 467563:467565) chr5:1288662-1299328(probes 467564:467564) chr5:1-2319448(probes 467509:467936) 2.9004e-13 2.9004e-13 Actual Copy Change Given 0.8251 0.0010493 -0.11312 0.0026357 0.056228 2.9982 0.0087528 0.02511 -0.0091286 0.0015255 0.024268 2.6036 -0.018902 0.006109 0.024408 0.014051 -0.015394 -0.00013862 -0.089964 0.02806 0.82921 -0.27296 -0.099077 0.50387 -0.10487 -0.00080148 0.54683 -0.50815 0.35528 0.31525 0.38891 -0.021373 -0.029584 0.0022193 0.22437 0.055155 0 0.012795 2.1376 -0.013802 3.6569 -0.0015243 0.0079175 -0.064374 0.82823 -0.13812 0.50186 -0.029994 0.47423 0.0097276 -0.012851 3.6569 1.9014 -0.0056757 -0.046041 0.010006 0.56284 0.81172 0.60575 0.79975 0.46998 -0.32097 0.058145 0.0060263 -0.0015696 0.72806 -0.0078863 -0.0044312 -0.0066432 1.4112 -0.172 0.19817 0.065656 -0.005814 -0.12135 0 -0.93585 1.012 0.083198 0.79278 0.023706 3.6569 -0.00041585 0.036935 -0.78192 0.30857 1.032 1.3154 0 1.326 -0.15157 0 0.04883 -0.00069303 0.51385 0.00097064 -0.37718 -0.0040162 0.026514 0.039478 -0.096176 0.022304 0.004142 0.77412 0.83117 -0.0014515 1.1655 -0.020549 1.553 -0.32867 -0.014641 2.874 2.4033 3.4076 0.039873 -0.054151 -0.62874 0.0044411 -0.0027707 0.044007 -0.90305 -0.37493 0.0073609 0.34275 0.11726 0.0095883 0.07815 1.3042 -0.88037 0.19832 0.041817 -0.0067914 1.0903 0.674 0 0.0114 -0.35897 0.10526 0.3579 1.1212 -0.010034 -0.15789 0.10818 -0.01106 -0.11267 -0.11405 -0.022823 -0.021921 0.92128 0.012516 0.16235 0.021009 0.33254 0.058795 -0.50703 -0.010646 -0.0020784 -0.11561 -0.025209 -0.15528 -0.30475 -0.12095 -0.12252 0.08161 -0.0016629 -0.022808 0.49459 -0.012851 -0.036804 -0.02562 -0.43816 0.024055 -0.0056757 0.012376 0.023839 0.5633 0.26618 0.017733 -0.020549 0.0027745 -0.0013858 0.0052749 0.061079 0.042024 0.0023934 -0.040209 0.017264 -0.0053992 -0.32158 0 0.56045 -0.80352 -0.060883 0.4353 -0.060828 -0.14575 0.12358 0.10687 0.00035565 0.88846 0.62133 -0.0083005 0.96002 0.87847 0.23024 -0.021235 -0.32707 -0.14284 0.034046 0.88226 -0.38251 -0.020747 0.048688 0.0043021 0.34163 0.024286 0.012516 0.14251 -0.083508 -0.15935 0.011958 1.3695 0.1676 0.0029133 0 0.0061342 1.2378 0.0049969 -0.020549 0.024408 0.36559 0.28074 0.47753 0.18601 0.59674 0.0913 0.36583 -0.059538 -0.0038779 -0.0094046 0.53567 -0.96985 2.5615 -0.51225 0.4765 -0.0011087 -0.054286 -0.020412 0.23117 0.040044 -0.067812 -0.0038779 -0.16737 0.33399 -0.60633 -0.08744 0.017824 0.21547 0 0.47993 0.59278 0.035701 -0.017941 0.35806 0.0023581 0.042307 -0.033269 0.0026357 -0.023703 0.096611 -0.012162 -0.036129 -0.57071 0.90882 0.019783 0.74863 0.013911 0.0034687 1.4522 -0.35065 -0.005261 0.38188 -0.0073376 0.021043 -0.62083 -0.0080244 -0.24216 0.47049 -0.00069303 -0.0012473 -0.60587 3.6569 0.48199 -0.38342 -0.027261 -0.90715 -0.014228 -0.049891 -0.50877 -0.03395 1.1771 -0.0040162 -0.0037395 -0.058462 0.48682 -0.64923 -0.1827 -0.97623 1.2964 0.10798 -0.33017 -0.21701 -0.21206 -0.012713 3.6569 -0.83559 0.012564 -0.039529 0.0029133 0.52428 -0.62912 -0.87619 -0.052396 -0.28095 -0.14249 0.0054139 -0.85528 0.027076 0.39858 0.88526 0.0093098 0.021744 -0.019635 0.021966 -0.035366 0.004719 0.018299 1.2567 0.0013868 -0.78366 1.0293 0.35577 0.030591 0.059937 0.016705 0 -0.028218 0.10293 -0.003277 0.012934 0.64428 -0.0038779 -0.52174 -0.55527 0 0.0033021 -0.020138 -0.321 0.69346 -0.018765 0.66253 -0.36465 0.068952 0.47118 0.14846 0.011818 -0.0012473 Amplification Peak 7 - CN values 5q35.3 chr5:175337387-180915260(probes 565532:567533) chr5:177083350-177101770(probes 566047:566049) chr5:177083350-177413658(probes 566047:566052) 0.23703 0.23703 Actual Copy Change Given 0.8251 -0.025679 -0.11304 -0.24883 0 3.6569 0.0087528 0.023847 -0.0091286 0.0015255 -0.53781 -0.071381 -0.018902 0.006109 -0.015191 0.011679 0 -0.00013862 -0.089964 0.0027613 -0.014228 -0.28287 -0.080118 0.58865 -0.090626 0.010564 -0.61882 -0.51109 0.15621 -0.10254 0.41136 -0.02603 0.32109 -0.44631 -0.72734 0.01719 0 -0.0089906 -0.13316 -0.0099433 0.63755 -0.018078 -0.043195 -0.15226 0.64928 -0.14224 -0.024114 -0.029994 -0.54724 0.0097276 -0.012851 0.77041 0.61371 -0.0056757 -0.028901 -0.80657 -0.22463 -0.23441 0.12035 -0.012851 0.48354 -0.084538 1.9433 0.0023935 -0.0015696 -0.18836 0.013353 -0.021496 -0.0066432 -0.28762 -0.056173 0.19817 0.095072 -0.014228 0.0037465 0 -0.0083005 0.73663 0.053087 1.0652 -0.76793 -0.87961 -0.023977 0.036935 -0.75916 0.39131 1.0518 -0.72093 0 -0.43886 -0.54431 -0.014916 -0.52978 0 -0.0023553 0.010564 -0.59301 0 -0.63109 0.5953 -0.0026322 0.013074 0.004142 -0.034047 -0.16434 -0.0014515 0.30937 0.017963 -0.88012 -0.36301 0.47392 0.46468 0.090575 -0.22822 0.031295 -0.050403 -0.40068 -0.0024764 -0.0027707 0.044148 -0.89051 -0.35897 -0.94532 0.35332 -0.029311 0.52888 0.07815 -0.0081624 -0.91229 0.04812 0.034189 0.00096137 0.50974 -0.7962 0 0.0062062 -0.46012 0.087733 -0.90411 0.0098669 0.10658 -0.076516 -0.53184 0 -0.24648 -0.12148 1.4192 -0.65973 0.54488 -0.68067 0.16445 -0.67967 0.011121 0.039868 -0.85809 0.011539 -0.012989 -0.15569 -0.31038 -0.16026 -0.30475 -0.12095 -0.10644 0.75032 -0.0016629 -0.022058 -0.58579 -0.010646 -0.011816 -0.02562 -0.42593 0.0031194 -0.38459 -0.037218 0.033119 -0.6094 0.18495 0.017733 -0.0089906 0.0013868 -0.0013858 0.0052749 -0.2474 0.062794 0.0089274 -0.2 0.017264 -0.0011087 -0.32158 0 -0.23018 -0.80497 -0.16357 0.32082 0.80092 0.073619 0.11404 -0.57891 0.0013868 -0.54431 -0.22379 0.00027728 -0.076861 -0.91702 0.23643 -0.00013862 -0.32333 -0.25991 -0.93434 0.29867 -0.39691 -0.10662 0.058367 -0.098335 0.45652 0.010982 -0.54165 0.056228 -0.029492 -0.15935 -0.040019 -0.54751 0.15487 0.0029133 -0.028765 0.11517 -0.01639 -0.50877 -0.05006 -0.00013862 -0.018078 0.035965 0 0.18601 -0.62016 0.084717 0.34428 -0.063032 0.00041593 -0.0091286 0.54218 -1 -0.020961 0.053094 -0.47046 0.0015255 1.2081 0.0091705 0.23287 0.040044 -0.067812 -0.0038779 -0.45756 -0.29839 -0.54159 -0.016154 -0.015604 0.19786 0 0.46639 1.3263 -0.0031504 0.017544 0.32076 0.0023581 0.0467 -0.033269 0.0026357 -0.023977 0.096611 -0.45404 -0.018628 0.47667 -0.040437 0.048262 -0.0066432 0.013911 0.76293 1.4534 -0.33006 0.00458 -0.33433 -0.0020784 0.00041593 -0.62083 -0.0080244 -0.24216 -0.65659 -0.0080223 0.054945 -0.13199 -0.76766 0.49338 -0.18352 0.0095883 -0.8932 -0.0095426 -0.028306 0.52101 -0.0040162 0.31856 -0.0040162 -0.0037395 0.00013863 0.10016 0.54718 -0.0123 -1.0046 0 0.081958 -0.47617 -0.2308 -0.93806 -0.012024 -0.01354 -0.83333 -0.0079465 -0.038306 0.0029133 0.5473 0.064361 0.021603 -0.052396 -0.30097 -0.13135 -0.012576 -0.38121 0.027076 -0.91249 -0.0042929 0.017124 0.021744 -0.02384 0.015619 0 -0.45168 0.00033304 0.030761 -0.011887 -0.34291 -0.53236 -0.018078 0.032473 0.059937 0.0091705 0.021744 -0.0027707 -0.92293 -0.00027724 0.012934 0.57483 -0.0038779 -0.51815 -0.57457 0 -0.015081 -0.071338 -0.321 -0.058868 -0.007472 -0.50991 -0.36465 -0.056442 0.47084 0.00069327 0.010285 -0.0033243 Amplification Peak 8 - CN values 6p24.3 chr6:1977444-14532705(probes 568308:577189) chr6:8882920-9111178(probes 573289:573458) chr6:1-33412156(probes 567534:586898) 6.548e-09 6.548e-09 Actual Copy Change Given -0.0011087 0.52968 -0.054286 0.0114 1.0962 0.52004 0.00597 -0.0088416 -0.011749 0.37726 0.0068044 0.42901 1.6 0.45265 0.018561 -0.4044 0.11858 0.54083 -0.095384 0.37158 -0.34412 -0.0044312 0.94772 0.86076 0.75605 -0.11561 0.0038348 0.031155 -0.36297 0.56324 -0.0060215 0.02806 -0.34504 0.40561 0.45651 -0.010715 0.035524 -0.053611 0.27695 -0.051303 -0.0037395 0.77926 -0.0053992 0.26404 0.44208 1.0963 2.2006 -0.079077 0.46127 0 0.0020805 1.456 0.037924 -0.0092666 0.87308 0.026654 0.73492 0.27482 -0.11887 -0.01354 1.4469 -0.0031415 -0.26047 0.54822 -0.00044213 -0.15439 0.42688 1.664 0.85146 -0.16841 0.25027 -0.041702 0.59404 0.54171 0.013353 0.041741 0 0.36411 1.4101 0.54206 0.019223 0.2133 0 0.044574 0.73929 0.26012 -0.045134 0.46759 0.81985 1.0697 0.05637 0.0015255 0.92351 0.38403 0.52275 0.45905 0.0026357 0.0079175 -0.62731 0.60738 -0.0099565 0.76159 0.0042809 3.6569 -0.11128 -0.0021441 0.28253 0.0068044 0.79401 0.7488 1.1377 1.1589 0.020343 0.60016 0.42503 1.2016 0.26907 -0.0037395 0.0022193 0.023005 -0.022195 0.35745 0.89387 0.31113 1.0384 -0.0012473 0.17211 0.81688 0.80947 0.1601 -0.46083 -0.012447 1.575 0.080312 0.89693 1.5561 0.09333 0.51375 -0.036674 0.20748 0.017963 0.5865 0.093449 0.04344 0.68821 -0.76962 2.81 0.62424 -0.079476 0.66198 -0.61729 0.1122 0.0051359 0.093475 0.093475 1.039 -0.0020784 0.544 0.030591 0.36444 0.053094 0.31787 0.00077086 1.3529 0 0.23581 -0.044957 1.3539 -0.034017 0.39828 0.41111 0.81542 0.97028 0.49839 -0.11679 0.22592 0.26907 0.0061584 -0.11813 0.51403 0.1489 0.74803 0.025353 0.011818 0.56405 0.29915 1.1342 0.0084743 2.356 0.80675 0.57023 0.72282 0 1.0181 -0.038442 0.14838 0.13095 0.093911 -0.0036011 1.5458 0.090865 0.77291 0.64287 0.016845 1.0595 0.87727 0.1136 0.56383 0.11925 0.85621 1.0933 0.059874 0 -0.006001 3.6569 0.014749 0.0069435 1.156 0.0168 0.2641 0.041883 -0.51223 1.0195 0.54242 1.2891 0.84041 -0.021373 0.029325 0.78331 0.016425 0.43986 1.008 0.49389 0.27058 0.60738 0.38403 0.38377 0.46861 0.024548 0.4932 0.0045355 0.024268 0.87189 -0.060748 0.012097 0.87089 0.45922 3.6569 0.7467 -0.020961 -0.12416 -0.012713 -0.089145 0.0020805 0.97894 0.72055 0.79549 -0.0091286 -0.021235 0.88266 1.5145 0.0046157 0.81064 0.40761 -0.00013862 1.4469 0.70064 0.10482 -0.0030475 0.78748 -0.016602 0.63554 -0.038986 0.89413 0.0037465 1.0111 0.63993 0.026935 3.6569 0.23845 1.4512 -0.12992 0.80811 -0.3856 1.1683 1.1819 0.65204 0.53257 0.91501 0.0017269 1.0458 -0.020824 0.94547 0.25362 0.87109 0.012376 0.012795 0.73625 0.92229 0.038065 0.41317 0 -0.08413 -0.016884 0.16685 0.023706 0.27395 0.015587 0.53292 0 0.34974 0.457 0.88386 0.40411 0.4932 0.040751 0.71855 0.0080567 -0.0034632 1.7612 0.94793 0.81532 0.15831 -0.29821 -0.03749 0.94119 0.11858 0.41028 0.8689 0.87946 0.49909 0.66754 0.065513 0.62485 0.008892 0.52713 0.014246 -0.029966 0.74019 0.62725 0.77195 -0.0015243 0.93264 0.1345 -0.024935 1.2382 0.48936 0.86096 0 1.4546 1.1641 2.3229 0.42671 0.031155 0.008892 0.56166 1.0228 0.20519 1.4622 2.3023 -0.0037395 1.1494 0.94588 0.90613 0.075128 0.010006 0.0016642 Amplification Peak 9 - CN values 6q12 chr6:63915276-66019907(probes 602019:603020) chr6:64186751-64303209(probes 602160:602206) chr6:63915385-66023659(probes 602020:603022) 0.0066244 0.0066244 Actual Copy Change Given -0.0011087 -0.57718 -0.054286 0.0114 -0.58353 0.47536 0.00597 -0.60138 -0.0077482 0.36142 0.027638 -0.5615 -0.021098 -0.0088526 -0.016841 -0.4044 0.11858 0.54083 -0.096053 -0.058731 -0.34412 -0.20187 -0.0095426 0.86076 0.0081165 -0.11561 0.0038348 -0.50256 -0.35282 -0.43119 -0.0060215 0.02806 -0.39379 -0.42364 -0.14348 -0.0057491 0.035524 -0.053611 0.27695 -0.051303 -0.38291 -0.90236 -0.0053992 -0.15707 0.44681 -0.12439 0.8085 -0.079077 0.47935 0 -0.55387 -0.05725 0.037924 -0.010697 -0.86893 -0.76766 -0.22687 0.27482 -0.11887 -0.01354 0.40957 -0.0031415 -0.26047 -0.24729 -0.00044213 -0.68269 -0.006505 -0.013127 -0.91785 -0.16841 -0.43539 -0.041702 -0.63434 -0.0063668 0.013353 0.041741 0 -0.32193 1.7076 3.6569 0.019223 0.2133 0.0029133 0.044574 0.057653 0.88066 -0.5151 0.24793 -0.88527 0.41028 0.041317 -0.72252 0.0075804 0.36957 0 -0.47533 0.0026357 0.0079175 -0.62217 0.052952 -0.0099565 -0.76828 0.0042809 -0.034456 -0.43637 -0.0021441 0.51542 -0.85536 0.79401 -0.50142 -0.0030475 -0.018902 0.020343 -0.038714 -0.087844 -0.023628 -0.17841 1.1205 0.0022193 2.1644 0.019153 0.17769 -0.015879 -0.33814 0.34681 -0.59585 0.17211 0.37314 0.040751 0.1936 0.0034767 -0.012447 -0.60821 0.088548 -0.9213 -0.90396 0.09333 -0.32344 0.0080567 -0.18471 0.017963 -0.62836 -0.51548 0.04344 0.060316 -0.76962 -0.40491 -0.025209 -0.079476 -0.67747 -0.5974 -0.61114 -0.37144 -0.34021 0.093475 -0.48947 -0.54098 0.53092 0.030591 0.012655 -0.29497 0.034739 0.012655 -0.012438 0 -0.24156 -0.017941 1.3539 -0.54678 -0.50142 0.023145 0.0021478 0.31065 0.028341 -0.11679 -0.31949 -0.35453 0.0061584 -0.11813 -0.0048461 0.10964 -0.0023553 0.025353 0.011818 0.55979 0.019223 -1.0977 0 0.076998 0.14384 -0.62064 0.011488 0 1.4334 3.6569 0.85195 0.13095 0.093911 -0.78159 0.54983 0.090865 -0.78454 -0.51937 0.016845 0.67254 -0.34312 0.1136 2.3651 0.11925 0.85621 -0.3531 0.059874 0 -0.11802 -0.21055 0.010982 0.019363 -0.10886 -0.012533 0.2641 0.041883 -0.48743 0.22407 0.54171 -0.47078 -0.88403 -0.016567 -0.0073339 -0.87494 -0.019314 0.45404 0.32753 0 0.27058 0.87886 0.38403 -0.04625 0.089851 0.024548 0.4932 0.022399 0.92189 0.7637 -0.060748 0.012097 -0.0027707 2.5425 0.39978 -0.60154 -0.015191 -0.12416 -0.040209 -0.089145 0.0020805 -0.53032 -0.011198 -0.82529 -0.0091286 -0.021235 -0.30674 1.5184 -0.0037587 -0.0066432 -0.5162 -0.00013862 1.4209 -0.041241 0.081535 -0.0030475 0.12087 -0.46557 -0.63282 -0.038986 0.0051802 -0.79411 -0.0069195 0.013911 0.00458 -0.035176 0.72244 -0.020961 -0.12992 -0.83017 -0.3856 -0.36906 -0.033814 0.61407 0.011679 -0.9643 0.0017269 -0.55467 -0.020824 -0.6333 0.25362 -0.0029455 0.012376 -0.0050274 0 -0.023703 0.022585 0.27857 0 -0.08413 -0.0056757 0.16685 0.023706 0.27395 0.015587 -0.57595 0 0.24507 0.457 0.14099 -0.4256 -0.04983 -0.82489 -0.75596 0.013772 -0.52174 -0.57054 0.13214 0.78119 0.15831 -0.28107 -0.03749 -0.9676 -0.35578 -0.44846 -0.2175 -0.017254 -0.48879 -0.00055444 0.065513 -0.60464 0.008892 0.025812 0.014246 -0.029966 0.74019 0.11089 0.75223 -0.0015243 0.89146 0.12668 -0.024935 -0.0087146 -0.03885 -0.86523 0 0.0061174 1.1339 -0.0055375 0.41928 0.031155 0.008892 -0.0039055 -0.39875 -0.15975 0.73117 -0.0030475 -0.0029091 1.1494 -0.65277 3.6569 0.075128 0.010006 0.0012641 Amplification Peak 10 - CN values 7p22.1 chr7:1-8532843(probes 663523:666648) chr7:6288870-6352276(probes 665570:665589) chr7:1-20201885(probes 663523:672939) 0.00015162 0.00015162 Actual Copy Change Given 3.6569 0.5618 0.070099 0.23923 1.046 0.49905 1.0061 0.5998 0.47838 -0.00013862 0.019783 0.42497 -0.069466 0.0058309 0.011121 0.0090312 -0.0066432 0.15771 0.78891 0.00083195 0.28105 1.0032 0.50654 -0.020412 0.038347 -0.012999 0 0.17754 0.43361 0.031111 0.41907 0.21837 0.010564 -0.0013858 0.079015 0.77454 0.14399 0.43378 0.21714 -0.50866 -0.00055444 0.81181 0.71961 0.25777 1.6943 -0.15485 -0.00069303 0.021463 -0.033814 -0.0063668 0.51874 -0.00069303 0.90795 1.6966 -0.016841 0.030169 0.79781 0.011472 0.86712 1.4721 0.41279 0.086713 0.33173 0.27472 -0.0065501 0.43851 -0.0012473 0.87966 0.00041593 -0.093535 0.14444 1.5284 0.59818 0.55036 0.0036076 -0.46355 0.81552 0.29676 0.30505 0.0072217 0.70307 0.033779 0.033972 0.45965 0.026233 0.54541 0.34611 0.52923 0.82236 0.38982 1.5084 0.88986 0.83431 -0.0022168 0.50898 0.46383 0.56472 0.91784 1.2362 0.64708 0.076422 1.5421 0.0080355 -0.024074 0.12638 -0.18225 0.98142 0.76561 0.018156 0.066372 0.49666 0.5998 3.6569 0.9138 -0.082535 -0.01354 0.79316 0.36674 0.0051359 0.38816 0.0114 0.29867 0.89728 0.34502 0.85067 0.026935 0.016286 0.0026357 0.036512 0.14214 -0.47284 -0.0077574 1.0566 0.027216 1.7391 0.0049969 0.67623 1.4224 0.11726 0.0043021 0.094491 1.0604 -0.24861 0.42116 0.7888 1.0068 -0.031302 0.0072217 1.0166 0.027357 0.89849 0.074777 0.31514 -0.025146 0.092315 -0.43821 0.98452 1.0701 0.040326 0.0020805 0.47924 0.52101 0.33173 1.3863 0.015587 0.2573 0.51874 0.81084 0.55292 0.3484 -0.036401 -0.022129 -0.0026322 0.0036076 0.39748 0.12228 0.85878 0.020813 -0.0020784 0.0026357 0.092315 0.00597 0.066229 -0.0012473 -0.0026497 0.28921 1.0898 0.0011093 0.1428 1.2542 0.68496 0.78292 0.19908 1.387 0.00083195 0.39405 0.20809 0.10555 -0.049523 0.8693 0.49614 0.73492 0.42823 0.85779 0.51464 0.86235 0.0011821 0.58542 0.040966 -0.31213 0.4042 0.090106 0.068522 0.094201 -0.11794 0.026233 -0.0011087 -0.18433 -0.81797 0.25639 0.041034 2.5438 0.17965 0 1.3926 0.037641 0.43665 0.52678 1.5157 0.058224 0.42486 -0.0095426 1.336 0.13155 -0.0063668 0.22453 0.39205 0.072109 0.01124 -0.0066432 0.5199 0.068952 -0.0013858 0.045282 0.0098669 0.00097064 -0.082137 0.73682 0.50342 0.74108 0.29304 1.1312 0.1167 0.11961 0.49718 0.88166 0.77522 0.21394 0.37185 0.8048 1.8721 0.28806 0.78369 -0.52634 0.00022155 0 2.0415 0.14399 1.0953 0.081263 0.01433 0.64011 0.4543 2.9991 -0.0016629 -0.84106 0.32737 0.0086135 3.6569 1.0036 0.022444 0.18223 0.40617 -0.39007 -0.15298 0.0068044 0.09101 0.52941 0.93305 -0.0056757 0.42402 0.080601 0.48664 0.34558 -0.81556 0.015382 -0.0011087 -0.018353 0.52136 0.037359 0.055131 0.0016642 0.13613 -0.016216 0.13895 0.03637 0.21345 0.0375 1.051 -0.036946 0.51228 0.73303 0.14325 0.82294 0.40044 0.81298 0.00908 0.69173 0.51629 1.5701 0.37578 0.76696 0.13874 0.29583 0.52293 0.0094491 0.06308 0.42856 0.45547 0.69895 0.016425 -0.013815 0.085787 0.032046 -0.0008316 -0.013264 -0.14908 1.911 -0.0040983 0.58738 0.15218 0.36723 1.691 0.13155 0.46314 0.8481 0.51926 1.5647 -0.0016629 -0.019726 1.7334 0.0015255 0.90653 0.02525 0.28058 0.0038127 0.36559 0.088258 1.5093 0.77003 1.1921 0.59458 1.819 0.82843 0.058509 -0.0066432 0.00597 Amplification Peak 11 - CN values 7q34 chr7:136467935-142508606(probes 733374:736506) chr7:139475875-139562943(probes 735096:735146) chr7:114154707-159138663(probes 720963:744507) 1.6371e-07 1.6371e-07 Actual Copy Change Given -0.012771 0.0027144 0.049256 1.1663 1.0706 0.49905 -0.00013862 0.61861 0.47838 -0.0024169 0.015727 0.41742 1.1128 -0.00027724 0.020483 0.39811 -0.0066432 0.15771 0.76613 8.499e-05 0.3137 0.52573 0.4958 -0.007472 0.71848 0.64433 0 0.17754 0.40827 0 0.39338 0.086595 3.4847 3.6569 0.11301 1.4804 0.14399 0.43378 0.17618 1.4844 -0.0073339 0.7763 0.75433 0.25777 1.6184 1.1136 0.79162 0.021463 -0.00032727 0 0.51874 -0.020275 0.70745 1.6543 0.013353 0.036935 0.78061 0 0.8456 0.74252 0.42156 0.2272 0.21953 0.7829 -0.0065501 0.60377 -0.005261 0.11023 -0.0019399 1.1564 0.14444 1.3879 0.58919 0.52395 0.75356 0.58686 1.7498 0.29676 0.30505 0.34827 0.68161 0.046133 0.033972 0.63938 0.033515 0.54259 0.34488 0.50168 0.82303 0.36674 0.85462 0.88586 1.3246 -0.0052758 0.95878 0.45279 0.56028 0.94262 0.63462 0.62697 0.070673 1.5269 0.0080355 -0.024074 1.4276 0.55594 0.024268 0.72905 0.019975 0.76619 1.9261 0.58417 -0.33312 0.44545 -0.082269 -0.01354 0.55071 0.36674 0.0051359 0.39429 0.00034762 0.25981 -0.95659 0.33254 0.85067 0.60756 0.64304 -0.011335 0.039337 0.17197 0.019158 0.016416 1.3737 -0.0055375 1.7448 -0.015879 0.65204 -0.1071 0.76472 0.0043021 1.7485 0.59094 0.1851 0.46058 0.78127 0.030732 -0.031302 0.0072217 1.0166 0.031295 0.89849 0.056517 0.31514 -0.017254 -0.0016629 -0.43821 0.96987 0.52678 0.013633 0.0020805 0.47924 0.52538 0.33221 0.0090312 0.015587 0.25543 0.50099 -0.14294 0.51203 0.33707 -0.0018014 -0.019639 0.37397 0.015278 -0.02488 1.911 0.59368 0.48412 -0.0020784 -0.0033817 0.092315 0.00041593 0.061365 0.77149 0.0033652 0.29326 1.0898 0.00458 0.11364 -0.005261 -0.18333 0.78292 0.19908 1.2809 0.00083195 0.39206 0.20809 1.8185 0.015802 0.025179 0.58668 0.72569 0.86494 0.8249 0.50099 1.6341 0.67567 0.5763 0.043089 -0.30733 0.38985 0.27518 0.068522 0.094201 -0.12003 0.60593 -0.0011087 0.26451 0.7474 0.25639 0.039337 0.92239 0.18147 0 2.0384 0.038913 0.40209 0.47735 1.4992 0.071535 0.88426 -0.0095426 0.95878 0.13155 0.59404 0.52275 1.1415 -0.32145 0.061937 -0.018765 0.51752 0.057796 0.8705 0.038771 0.0098669 0.00097064 0.67882 0.09638 1.4229 0.75414 0.29777 1.1567 0.62518 0.47838 0.49718 0.34827 0.030732 0.21668 0.37578 0.8048 1.8235 0.28806 0 0.41195 0.00022155 0.6226 0.0090312 0.098706 1.1407 0.081263 -0.018765 0.63116 0.46024 -0.14395 1.6718 0.19999 0.32447 0.012163 -0.041295 0.98578 -0.011412 0.19269 0.38392 0.36969 -0.15298 0.64983 0.09101 -0.65631 0.89693 -0.14644 0.89648 0.7982 0.96288 0.34558 0.0065262 0.0058036 -0.0020229 -0.018353 0.52031 0.026989 0.055131 0.0016642 0.12771 -0.012379 1.0684 -0.6509 0.21345 0.036723 1.0428 0.16814 0.12535 0.73303 0.13356 0.81474 0.42318 0.34275 0.0077111 0.82196 -0.004021 1.4826 0.40127 0 0.92228 0.29694 0.52293 0.94364 0.040609 1.1892 0.88406 0.032281 0.016425 -0.013815 0.079159 0.023893 -0.0078863 -0.022881 -0.13324 1.911 -0.0040983 1.8545 0.040751 0.36166 1.7079 0.11404 0.41245 1.7298 0.51856 0.90472 0.47804 -0.019726 1.7029 -0.00522 0.87926 0.040185 0.27655 0.0031632 0.36296 0.088258 1.5093 0.77003 -0.050235 0.57523 2.2889 0.81687 0.85502 0.83471 0.00597 Amplification Peak 12 - CN values 8q24.21 chr8:115168887-146364022(probes 806928:825625) chr8:128653002-128809606(probes 815654:815773) chr8:98755657-146364022(probes 798088:825625) 2.8957e-05 2.8957e-05 Actual Copy Change Given -0.011887 2.4901 0.27458 0.040892 1.8587 -0.034657 0.98887 0.021328 0.48923 0.085076 0.016705 0.43947 -0.0095426 1.606 1.0669 0.39015 0.057226 -0.00055444 0.65946 -0.0029091 0.26797 0.019783 2.34 0.39065 -0.04726 0.07369 0.0022193 -0.22268 0.92655 0.26277 1.0955 -0.0055375 0.34404 -0.0042929 1.095 0.013977 -0.012812 0.49044 0.36231 0.38553 0.079015 1.4697 0.74499 0.26954 0.71565 0.61763 0.79684 0.019643 0.78061 0.0026357 1.4764 2.0643 0.17588 -0.0067415 0.0037465 0.03288 0.79226 0.0095205 0.26812 1.7156 0.45581 0.0060146 -0.36283 0 0.0020352 0.32834 1.1095 0 -0.010094 -0.20037 0.00055459 0.26545 0.57237 -0.0034627 0.020203 0.039619 0.015961 0.04259 0.083054 0.72659 0.010703 0.076279 0.0024969 0.019643 0.049824 -0.020916 1.9711 0.49078 0.81162 0.0066653 0.13554 0.4599 0.85462 0.47067 0.49528 0.45615 0.012731 0.029466 0.029325 -0.29114 0.028903 0 0.0049757 2.0918 0.63317 0 0.73416 2.4719 0.01215 0.23009 1.2192 0.58955 0.72301 1.1903 0.17769 1.0088 0.04883 0.023426 0 0.15681 0.011958 0.41865 0.86037 -0.3634 0.96345 0.00597 -0.00069303 -0.005261 0.019923 0.18859 -0.45461 -0.0073083 -0.0029955 0.029513 -0.0070576 -0.00041585 0.66106 -0.10237 0.80967 0.19086 0.88306 0.60106 -0.1499 0.050819 0.075049 0.039195 0.90964 0.6257 0.6277 0.65479 -0.060613 0.014837 -0.0069195 -0.021647 0.031999 1.8458 -0.0078863 -0.013953 0.030732 0.10045 0.1625 0.28327 0.042449 0.026898 0.0013868 0.26474 0.46844 0.68477 0.49588 0.40244 0.029747 0.81405 0.0011093 0.0069435 -0.097503 3.6569 0.27647 0.21412 0.010424 0.0016642 -0.00027724 0.73758 0.064511 0.29038 -0.111 0.13865 0.025671 0.0037465 -0.39742 0.6805 0.17332 0.012655 0.11477 0 0.016286 -0.13529 0.11477 0.74043 0.0089511 1.2996 0.25981 -0.0020784 0.98371 0.0091705 0.60702 1.2331 0.3025 1.0767 -0.020262 0.27537 0.017484 -0.0086372 0.044432 0.004719 -0.1034 -0.0047079 0.012795 0.16205 0.76702 -0.25888 -0.0018014 0.016006 0.90271 0.0023581 -0.19366 0.021043 0.41513 0.97614 3.3269 1.4004 0.43075 0.67742 0.9596 -0.090229 1.0651 0.18344 1.499 0.07815 -0.0014783 0.68906 0.53093 0.036935 1.6706 0.022725 0.0069435 2.3651 0.41061 0.41731 -0.21763 0.03637 0.19883 -0.00055444 0.010171 0.17031 0 0.71829 1.4195 0.15278 0.1854 -0.059404 0.96946 -0.064742 0.76076 0.48458 0.66493 1.0604 -0.025072 0.19026 0.55815 -0.31335 0 0.63956 0.95672 -0.00092595 0.016146 0 0.014888 0.0034687 2.2637 0.30282 0.70701 0.16085 0.79084 0.5681 0.22962 3.2474 0 0.55921 0 -0.0083142 0.45054 0.82568 0.98018 0.39802 -0.0085006 1.5903 -0.0019399 2.0815 0.80461 -0.12538 0.0071248 0.37891 -0.0018014 0.42519 -0.056442 0.032422 -0.005261 0.032281 0.0026357 -0.05469 0.10716 1.3431 0 0.39761 0.37528 0.32689 0.71139 0.003191 0.98618 -0.0019803 0.04812 0.7372 0.13924 0.0051554 0.50689 0.0024969 0.89547 0.30122 0.98417 0.0065262 0.47478 0.67813 0.083776 2.2249 0.74861 1.0388 0.68652 0.033296 -0.0073339 -0.142 0.54224 -0.0055375 1.2639 -0.33901 -0.032587 0.82157 1.494 1.624 0.45629 0.61353 0.57358 0.46007 0.76466 -0.54512 0.055373 0.55723 1.0678 -0.067044 0.7635 -0.0123 1.2103 -0.0015854 0.16685 2.3124 -0.76398 0.83687 0.27726 Amplification Peak 13 - CN values 11q13.3 chr11:69399650-69464717(probes 1010024:1010054) chr11:69434581-69462855(probes 1010036:1010053) chr11:66201236-81792958(probes 1008793:1017184) 1.9773e-15 1.9773e-15 Actual Copy Change Given -0.0040162 0.0074398 -0.04726 -0.24703 -0.62022 -0.013127 0.00055459 -0.62497 -0.012438 -0.37132 -0.51835 2.0631 0 0.00069327 3.6569 -0.020687 -0.00069303 0.00083195 -0.014503 0.74328 0.2087 -0.28542 -0.025756 0.38171 0.0070826 -0.011473 0.0030522 -0.50121 -0.12356 0.03548 0.39637 0.015168 0.37298 0.7862 -0.17322 -0.75223 -0.052396 0.23643 -0.19312 0.33984 0.35881 -0.0060904 -0.38403 -0.045499 -0.73337 -0.1479 3.6569 -0.065313 -0.062864 -0.017254 -0.0060904 -0.0098185 0.011261 -0.046117 -0.024524 -0.0047079 -0.4695 0.079165 -0.15349 -0.80294 -0.5426 2.2352 -0.78387 -0.25782 -0.011794 -0.21956 -0.0049844 0.0020805 -0.029992 -0.18358 -0.41937 -0.030677 -0.63026 0 -0.80259 0.047552 -0.014496 0.021183 -0.14322 -0.0062286 -0.70794 0 -0.00023943 1.2315 0.021904 -0.055634 -0.14004 0.43176 -0.93191 -0.41025 -0.4787 -0.0034627 -0.062092 -0.45815 0.012954 -0.0022168 -0.31891 -0.0053992 -0.30757 -0.014951 -0.033889 -0.006505 -0.00057558 3.5367 -0.15911 -0.0038307 2.4772 -0.018078 0.0047714 3.6569 -0.04211 1.618 -0.63311 0.0086135 -0.21441 3.6569 -0.37752 -0.0083005 -0.0038779 0.4262 0.0048579 0 -0.018202 0.34974 0 -0.60022 -0.018211 -0.012851 -0.015725 -0.18886 0.010778 0.48646 -0.078634 0.019643 -0.01106 -0.0033243 -0.51846 0.080357 -0.041431 -0.078622 0.024689 -0.72734 -0.50142 -0.1321 -0.11045 -0.74329 -0.40081 0.012097 -0.3133 -0.0001581 0.1637 0.10745 0.008892 -0.027563 -0.40196 -0.54703 -0.0073339 0.46263 -0.30932 0.0030522 -0.18999 0.15263 -0.0080244 0.00099446 -0.0020784 -0.0049844 -0.60969 -0.016237 0 0.34234 0.30441 -0.065651 -0.059942 -0.023018 0.16873 -0.15635 -0.043265 -0.057741 0.36264 -0.55987 -0.074277 -0.0033243 -0.080141 -0.012989 0.0029487 -0.12082 0.020063 0.0030397 0.93264 -0.71684 -0.19367 -0.023292 -0.079343 0.0068652 -0.044208 -0.134 0.05025 -0.27272 -0.010784 0.031155 -0.58608 -0.0042929 -0.011464 -0.013093 -0.014637 0 -0.38716 -0.22761 -0.39602 0.27537 0.38049 -0.069792 -0.028901 -0.18559 0.39885 -0.25854 -0.016017 -0.073209 0 -0.25743 -0.026304 -0.044785 -0.50225 -0.46653 0.019643 -0.00097017 -0.045712 -0.0056757 -0.037082 -0.83147 0.43496 0.34039 -0.0055375 -0.0011087 2.0787 -0.12121 3.6569 3.6569 -0.021709 -0.027808 9.4275e-05 -0.96058 1.6342 -0.50088 0 2.3073 0.3669 -0.42243 -0.32774 0.38105 -0.13738 -0.50454 0.78353 -0.047395 -0.52573 0.68198 -0.024524 0.034395 -0.14618 -0.040198 -0.055134 -0.0021813 0.84238 0.19238 0.013632 -0.056981 0.0086135 0 -0.62131 -0.73858 0.82764 -0.050568 0.43361 -0.0071517 -0.25495 -0.0083005 -0.57061 -0.034768 3.6569 -0.14322 -0.013677 0.11609 -0.018216 0.35907 0.45105 -0.060076 -0.29058 -0.033405 -0.023155 -0.0083005 0.32674 -0.16472 -0.58671 0.019285 0.018243 -0.027535 -0.004716 0.61607 -0.50443 0.026233 0 0.0075 -0.010474 0 0.32963 0 0.04883 -0.0084385 -0.12304 -0.0022168 0.1933 -0.60138 0.16325 -0.42582 1.2319 0.0026357 -0.010404 2.7359 -0.0051227 -0.57511 -0.027124 1.6419 -0.198 -0.0054783 -0.36906 -0.039122 0.077718 -0.017529 -0.1025 0.001803 0.0065823 -0.00041585 -0.30986 0.0047653 -0.0092666 -0.092213 -0.00063729 -0.020796 0.00055459 -0.2023 0.060365 -0.0060904 -0.066252 -0.82798 3.2137 -0.38044 0.31065 -0.038714 1.84 -0.78749 0.39857 -0.0019399 0.40594 -0.57417 -0.27774 0.0028856 -0.41493 -0.11874 -0.051859 -0.0051227 0.0043021 -0.3479 -0.71283 3.6569 -0.79766 -0.050506 0.90573 Amplification Peak 14 - CN values 12q14.1 chr12:58135797-58215836(probes 1080019:1080061) chr12:58138772-58145710(probes 1080020:1080026) chr12:57466591-60450998(probes 1079748:1081557) 5.5617e-09 9.594e-07 Actual Copy Change Given 0.0043021 -0.013737 -0.42156 0 2.6235 -0.01329 0.0037465 0.0052749 0.32785 -0.0038779 0.00055459 0.40272 -0.0055375 -0.00080039 0.5252 0.016705 -0.0018014 0 0 0.00027728 -0.014228 0.0011093 0 -0.0053992 0.021183 -0.01106 0.011539 -0.22268 0.23024 0.11707 -0.0038089 3.0764 1.7259 -0.0077482 0.19825 -0.0032593 0.00013863 0.0038854 3.4653 -0.063094 0.16971 -0.0048461 0.0019418 0.092605 -0.012292 0.53637 0.0066653 0.019223 -0.031086 -0.010468 0.0091705 -0.0081624 -0.15144 0.021323 0 0.016616 0.14875 -0.42882 -0.11168 0.3408 0.43513 -0.0041881 -0.74394 -0.10383 0.0061087 -0.13075 0.00069327 0.00597 -0.0045695 -0.058462 -0.19637 -0.019452 -0.0015243 0.0015255 -0.0059747 -0.087712 0.84494 0.028481 0.053379 -0.0034627 0.012097 -0.38638 0 0.033267 0.015727 3.6569 -0.45697 -0.6782 0.00055459 0.15933 0.12373 0.0024969 -0.0076527 -0.42386 0.011539 0.00055459 0.008892 0.00031884 0.033972 -0.0096806 0.02597 0 0.0027533 -0.028725 0.39778 0.00035014 0.49078 0 -0.83806 1.8034 0.4951 3.6569 0.028481 -0.0077482 0.024969 -0.54714 0.57059 -0.0060904 0.0033299 -0.075878 0.014051 0.35668 0.77541 0.32543 -0.032587 -0.0013858 -0.0030475 -0.0048461 0.003191 -0.25039 -0.45688 -0.0043021 -0.013626 -0.79795 0.0024969 -0.0034007 0.094782 0.21422 0.010564 -0.17107 0.062937 -0.022195 0 0.06208 -0.26823 -0.72253 -0.021589 -0.62836 -0.0018014 0.0041632 -0.067055 -0.65343 0.00083195 -0.020549 -0.37909 -0.53378 0.43783 1.1236 0 -0.0044312 0.0282 0.13586 0.015028 0.0066032 0.0051359 0.0019418 -0.021921 0 -0.0036688 -0.23606 -0.42757 -0.013735 -0.38358 -0.55276 0.13213 0.032422 -0.03335 0.026259 0.020203 0 0.0037465 -0.0045695 -0.24262 -0.0027707 -0.0056406 0.010285 -0.52879 -0.0020784 0.025812 -0.023977 -0.20336 -0.0030074 -0.053206 3.6569 0.0094728 -0.12271 -0.19475 0.098415 0.0097276 -0.4935 -0.16359 0 -0.0078768 0.0076392 -0.20635 0.0094491 0.18711 -0.20999 0 -0.29904 0.020225 0.017203 0.10804 0.014888 -0.70781 -0.68003 0.0098669 0.67252 0.026188 -0.24713 -0.028765 0.46978 0.12992 0.051672 -0.43333 -0.014916 -0.0036249 0.018243 -0.0091286 0 0.45343 -0.0038779 0.0034687 0.034959 0.0049969 -0.11574 -0.028155 0.068403 0.010564 -0.0045695 0.019178 2.8229 -0.00055444 0.03369 0.0079175 0.0016642 0.2061 0.00597 3.6569 -0.15822 0.057704 0 0.078897 -0.10684 -0.023039 0.18253 0.0027745 0 -0.00055841 -0.007472 0.012097 0.00064756 0.00458 -0.50287 -0.0018014 -0.091816 -0.0083601 -0.18005 -0.005261 -0.32535 0.0073609 -0.0029547 -0.027808 0.89193 0.85581 0.060222 -0.29752 -0.0060697 0.76734 0.64249 -0.0033243 -0.69376 0.0086135 -0.077345 -0.26691 -0.011749 0.090285 -0.036604 -0.013242 -0.0047079 -0.55327 -0.061689 0.50776 0.01509 -0.86295 0.0037465 0.0068044 -0.018902 -0.0088526 -0.10893 0.0046222 0.0054139 0.00458 0.0098669 0.015168 -0.66087 -0.0049844 0.011679 3.6569 -0.025893 -0.12291 0.17242 0.49138 0.35724 3.6569 -0.82415 0.017173 0 -0.0018014 0.037176 -0.7796 0.0015255 -0.053611 0.0093294 -0.13949 -0.9521 -0.38789 -0.010784 0.42963 0.001803 -0.21738 0.0037465 0.094056 -0.28366 -0.0033152 0.45888 -0.012624 -0.024223 -0.017116 -0.1108 3.6569 -0.00041585 -0.084511 -0.33468 0.012795 0.0087528 -0.011749 0.020903 0.0012001 -0.0012265 0.058842 0.00013863 -0.50712 -0.56356 0.029606 -0.0047355 -0.019863 0.011889 -0.038173 0.010285 -0.47077 -0.34859 0.17648 0.006369 -0.088639 0 0.01419 Amplification Peak 15 - CN values 12q15 chr12:69127775-69670720(probes 1086926:1087294) chr12:69590825-69624486(probes 1087254:1087272) chr12:67372407-72979226(probes 1085632:1089313) 9.9717e-11 0.00040434 Actual Copy Change Given 0.0043021 -0.013737 -0.42156 0 2.6354 -0.01329 0.0037465 0.0052749 0.32785 -0.0069274 0.0070826 0.40272 -0.0055375 -0.00080039 0.024408 0.016705 -0.0018014 0 0 0.00027728 -0.014228 0.0011093 0 -0.0053992 0.021183 -0.01106 0.011539 -0.21911 0.23024 0.11707 -0.0038089 3.0532 2.9829 -0.0077482 0.19825 -0.0032593 0.00013863 0.0029133 3.6569 -0.049682 0.16971 -0.0048461 0.0019418 0.092605 -0.012292 0.53637 0.0066653 0.019223 -0.031086 0.38518 0.0091705 -0.0081624 -0.15144 0.0095078 0 3.6569 0.14875 -0.42882 -0.11168 0.3408 0.43513 -0.0041881 -0.74394 -0.10383 0.0061087 -0.13075 0.00069327 0.00597 -0.0045695 -0.058462 -0.19637 -0.019452 -0.0015243 0.0015255 -0.0059747 -0.087712 0.84494 0.028481 0.053379 -0.0034627 0.012097 3.6569 0 0.033267 0.015727 -0.012576 -0.45697 2.2678 0.00055459 0.15933 0.12373 0.0024969 -0.0076527 -0.42386 0.011539 0.00055459 0.008892 0.00031884 0.033972 -0.0096806 0.02597 0 0 -0.028725 0.39778 0.00035014 0.49078 0 -0.83806 0.96966 0.4951 -0.052396 0.028481 -0.0077482 0.024969 -0.55407 0.57059 -0.0060904 0.0033299 -0.075878 0.014051 0.35668 -0.0063668 0.32543 -0.032587 -0.0013858 -0.0030475 -0.0048461 0.003191 -0.25039 -0.45688 -0.031505 -0.013626 0.018523 0.0024969 -0.0034007 0.094782 0.21422 0.010564 -0.17107 0.01447 -0.022195 0 0.06208 -0.26823 -0.72253 -0.021589 0.032422 -0.0018014 0.0041632 -0.067055 -0.65343 0.00083195 -0.020549 -0.37909 -0.53378 0.43783 0.45411 0 -0.0044312 0.0282 0.13586 0.015028 0.0066032 0.0051359 0.0019418 -0.021921 0 -0.0036688 -0.23606 -0.42757 -0.013735 0.0048579 -0.55276 0.13213 0.032422 -0.03335 0.026259 0.020203 0 0.0037465 -0.0045695 -0.24262 -0.0027707 -0.0056406 0.010285 -0.52879 -0.0020784 0.025812 -0.023977 -0.20224 -0.0030074 -0.053206 3.3994 0.0094728 -0.12271 -0.19475 0.098415 0.0097276 -0.4935 -0.15771 0 -0.0078768 0.0076392 -0.20635 0.0094491 0.18711 -0.20999 0 -0.29904 0.020225 0.017203 0.10804 0.014888 3.6569 -0.61566 0.0098669 2.7906 0.023802 -0.24713 -0.028765 0.46978 0.12992 0.051672 -0.43333 -0.014916 0.92087 0.49926 -0.0091286 0 -0.010508 -0.0038779 0.0034687 0.034959 0.0049969 -0.11574 -0.028155 0.075991 0.010564 -0.0045695 0.019178 3.5512 -0.00055444 0.03369 0.010285 0.0016642 0.2061 0.00597 -0.34641 -0.15822 0.057704 0 0.078897 -0.10684 0.0064187 -0.015054 0.0027745 0 -0.00055841 -0.016074 0.012097 0.00064756 -0.00055444 -0.50287 -0.0018014 -0.091816 -0.0083601 -0.18005 -0.005261 -0.32535 0.0073609 -0.0029547 -0.027808 0.00087621 0.010842 0.060222 -0.29 -0.0060697 0.77349 0.98866 -0.0033243 2.2254 0.0038854 -0.075345 -0.26691 -0.011749 0.085221 -0.037261 -0.013242 -0.0047079 -0.55327 -0.061689 0.50776 0.01509 0.0416 -0.90555 0.0068044 -0.018902 -0.0088526 -0.10893 0.0046222 0.0054139 0.00458 0.0098669 0.015168 0.03369 -0.0049844 0.011679 -0.005814 -0.025893 -0.080541 0.17242 0.49044 0.35724 3.6569 -0.82415 0.017173 0 -0.0018014 0.037176 0.73813 0.0015255 -0.053611 0.0093294 -0.13949 -0.9521 -0.38789 -0.010784 0.42963 0.001803 -0.21738 0.0037465 0.12859 -0.28366 -0.0033152 0.45888 -0.012624 -0.024223 -0.017116 -0.1108 3.6569 -0.00041585 -0.084511 -0.33468 0.012795 0.0087528 -0.011749 -0.39341 0.0012001 0 0.058842 0.00013863 -0.50712 3.6569 0.029606 -0.0047355 -0.019863 0.011889 -0.038173 0.010285 -0.45447 -0.34927 0.17648 0.006369 -0.088639 0 0.01419 Amplification Peak 16 - CN values 13q31.3 chr13:90214960-91307433(probes 1164353:1165030) chr13:90773762-90790447(probes 1164743:1164754) chr13:90703210-91006933(probes 1164700:1164869) 0.071507 0.071507 Actual Copy Change Given -0.00055444 0 0.39018 -0.24107 0.5788 0.46533 0.00097064 0.027216 0.26483 -0.0047079 -0.48523 -0.070846 -0.025209 -0.010508 3.4013 -0.40263 -0.13755 0.0043983 -0.21354 0.0034687 -0.3424 -0.017529 0.47495 0.4163 0.0066653 -0.0020784 -0.00055444 -0.49559 0 0.069194 0.42898 -0.023566 -0.0098185 0.40594 0.1634 0.014675 -0.083067 -0.0041546 0.2287 0.3491 0.00041593 0.024268 0.0087528 -0.12082 -0.22022 0.013581 0.016705 0.021744 0.1114 0.010285 -0.0077482 -0.019314 -0.071606 -0.0054409 1.2301 -0.13639 -0.18536 0.45726 -0.35521 -0.017391 0.45496 -0.34695 -0.025483 0.27015 0.00037062 0.31932 -0.0069195 -0.18798 0.87867 0.17178 0.034254 0.1041 0.022725 0.0037465 -0.76903 -0.44706 -0.88588 -0.74246 -0.62265 -0.023155 0.021744 0.077142 0.0013868 -0.57229 0.04344 0.0012481 2.688 0.068808 -0.0053992 -0.43225 -0.19875 0.0072217 0.011256 0.010006 -0.51146 -0.47691 -0.28917 0.37593 -0.30833 -0.59234 -0.025209 -0.76475 -0.0027567 0.70706 -0.091392 -0.00034301 -0.35259 0.68087 -0.85525 0.085221 -0.0095426 -0.0024938 0.14786 -0.036401 0.12933 -0.024 -0.17689 -0.40119 0.0036076 -0.077745 0.028622 0.22422 -0.018765 1.2003 -0.4186 0.011425 0 3.6569 0.0087528 0.26891 -0.0022474 -0.030549 0.53527 -0.77464 0.90895 0.81825 -0.47448 -0.31774 -0.86113 0.20003 -0.041974 0.60864 -0.51609 -0.33653 0.40168 -0.72606 2.8271 -0.00069303 -0.61882 -0.029175 -0.098417 0.058081 -0.0060904 -0.02151 0.088832 0.95694 -0.21181 0.55354 0.014464 0.0049969 -0.22576 0.1348 -0.1827 -0.71301 -0.0071958 0.00097064 0.50672 0.66925 0.012029 0.32076 0.032422 0.010074 -0.0083896 0.022725 -0.10947 0.0076392 0.27269 -0.011976 0 -0.010508 -0.0030475 0.14459 -0.25055 -0.16536 -0.0030123 -0.036401 0.016565 0.054025 0.060794 0.015866 0.19603 0.043723 -0.14657 -0.48565 0.0098669 -0.12882 0.1094 -0.23264 0.018103 -0.049559 -0.21069 0.72244 0.3809 -0.89488 0.58793 -0.016429 -0.41926 0.52696 0.019996 0.26624 -0.37723 -0.011534 0.040468 -0.22819 0.37976 -0.29355 0.011958 0.16535 -0.055947 0.24361 -0.045906 0.4958 0.17664 0.1845 0.47993 0.0015255 -0.061823 -0.50815 0.0077783 0.59188 0.84454 0.33124 -0.00079364 0.13554 -0.033481 0.10804 0.45725 -0.062495 -0.024524 0.2708 0.013448 0.067805 0 -0.45811 -0.0037395 -0.00027724 -0.041159 0.0090312 0.65811 -0.015879 -0.09824 -0.49153 0.045488 0.077142 0.90847 0.72565 2.1008 -0.4013 -0.08094 0.1631 -0.0013858 -0.0096452 0.5458 0.39811 -0.01191 0.79394 0.8048 0.11038 0.5649 -0.30197 -0.00013862 0.0037465 0.0086135 0.91527 -0.00055444 0.015308 -0.3071 -0.87518 -0.012162 0.045324 0.0056919 0.12329 0 0 0.31402 -0.0085766 0.072827 0.50516 0.0079175 -0.0033243 0.45258 -0.33618 -0.052396 0.028262 -0.033677 0.021323 -0.00018423 0.678 -0.034768 -0.071205 0.76817 -0.015329 0.0027745 -0.010979 -0.048072 0.018103 0.023566 0.029606 0.00027728 0.093185 -0.3356 0.88106 0.46536 0.069669 -0.51589 0.038347 0.012285 -0.84459 0.0036076 0.35948 0.31257 -0.028218 -0.17917 0.29997 0.08161 0.020903 0.65608 0.0038854 1.1492 -0.0090709 -0.21997 0 0.42822 0.023332 0.55393 0.56134 0.021099 -0.067832 0.044999 0.0042818 0.64561 -0.011649 -0.057924 0.09667 -0.049154 -0.0085766 0.48768 -0.38649 0.0019418 0.016705 -1.229 0.00013863 0.8689 -0.51609 0.0052749 0.003441 0.36707 0.033127 0.76101 0.76696 3.6569 1.1096 -0.18421 -0.44566 1.1113 0.001803 0.0069435 Amplification Peak 17 - CN values 15q26.2 chr15:82580737-102531392(probes 1262631:1273706) chr15:96967336-97098673(probes 1270928:1271002) chr15:69893740-102531392(probes 1255490:1273706) 9.6912e-06 9.6912e-06 Actual Copy Change Given 0.0027745 0.010921 -0.41245 0.07254 -0.0079307 0.0090048 0.016286 0.60991 -0.048345 0.01163 -0.0083005 0.31653 0.0080567 0.013213 0.0098669 -0.0034627 -0.055748 0.51176 0.30094 -0.0049844 0.25074 0.24575 -0.032996 0.43273 -0.023703 -0.060345 0.017824 0.19679 0.1619 0.011292 0.012864 -0.007609 0.37719 0.43176 0 0.038838 0.011679 0.45105 -0.13833 0.35889 0.0011093 0 0.015028 0.030873 1.0074 0.59793 0.44105 0.0054139 -0.12512 0.0052749 0.020623 0.76523 0.032986 0.088113 0.00012065 -0.014503 -0.29874 -0.39082 0.066062 0.045566 0.0020805 0.26472 -0.73024 0.79055 -0.0065501 0.14712 0.0063871 0.0065262 0.80364 0.2642 -0.21243 0.2858 0.0020805 0.53925 -0.033132 0.072396 0.017824 0.35186 1.7059 0.0011093 -0.032178 0.03031 -0.0044312 0.59134 0.0072217 0.50082 0.30277 -0.076812 -0.0036011 0.11873 0.82431 -0.0044312 -0.02151 -0.46653 0.046984 0.0037465 0.025812 0.36871 -0.26564 -0.096308 0.017544 -0.0094046 -0.0044523 0.77047 3.6569 0.017198 -0.010508 0.015308 -0.00036351 0 -0.56952 0.62133 -0.30054 0.032704 0.098415 -0.54306 0.093621 0.0022193 -0.00097017 -0.033677 -0.0047079 0.2355 0.062859 0.34518 -0.42331 -0.0011087 0.61172 -0.0080244 -0.010094 0.12285 0.020698 0.14651 0.52107 0.0029133 -0.01849 0.00083195 0.067375 0.33755 -0.056307 -0.031905 0.039195 -0.41685 0.09304 -0.008472 -0.3206 -0.10678 0.0011676 -0.0024938 0.28786 -0.014142 0.41815 0.1177 -0.0060904 0.32495 0.026373 -0.53338 -0.0011087 -0.035857 0.045991 -0.0073339 -0.0081624 0.16926 0.23938 -0.0030475 0.00083195 0.00083195 0.46144 1.4455 0.44689 0.1041 0 -0.019248 -0.058731 0.44139 -0.23129 0.57095 0.25699 0.027828 -0.10026 0.53116 0.0016642 -0.38112 0.077574 -0.11391 0.023462 0.11844 -0.52861 -0.032041 -0.22883 0.59998 0.17757 1.4414 0.23473 0.60593 -0.038034 -0.12011 0.11536 0.10731 -0.032723 0.060079 0.50393 0.74632 0.16821 0.013455 0.62533 0.029466 0.18662 -0.28727 0.035174 -0.26829 -0.0054588 -0.049754 -0.21837 0.18071 0.4659 1.1136 -0.0085766 -0.38145 -0.0032942 0.091763 0.035383 0.018243 2.721 0.14028 -0.1712 0.010703 -0.020549 0.03637 -0.019014 0.030732 0.84593 0.010982 -0.014503 0.19117 0.012277 0.17211 0.54991 0.0467 -0.013953 -0.0015243 0 -0.029175 -0.034359 0 0.0083351 0.016146 0.40311 1.523 0 0.41245 0.20983 -0.020549 0.13853 0.58023 0.45513 0.49718 -0.0039879 0.19125 0.082476 0.2084 1.7531 0.010321 0.020483 -0.54613 0.025531 -0.31809 0.7637 -0.13626 0.60864 0.029268 0.010703 0.61879 0.4353 -0.0018957 0.029325 -0.0040162 0.0027745 0.79801 -0.010508 -0.57605 2.8226 0.12285 0.031014 -0.020961 -0.25842 0 -0.012851 0.5029 -0.0096806 0.030451 0.30833 -0.023292 -0.013402 0.067582 0.060651 0.00458 0.01668 0.32495 -1.1903 0.56383 0.070286 0.044999 0.0019418 0.008892 0.15144 0.0097276 0.15547 -0.0059522 0.5359 0.47632 -0.42298 0.13066 -0.046718 0.40511 0 0.018675 -0.015006 0.0020805 -0.0042929 -0.16619 0.96658 2.5932 0.13831 0.2735 0.075991 -0.0087146 0.060079 -0.02661 -0.10931 -0.01037 0.04741 0.0054139 0.1076 0.023052 0.001681 0.47701 -0.54693 0.71984 0.0086135 -0.1524 -0.47591 0.0058309 -0.0083005 -0.7508 0.011261 0.034677 0.48699 -0.064643 0.010982 0.032845 0.59598 0.010006 0.45871 -0.00058246 0.0038854 -0.0072234 -0.029946 -0.0030475 0.73378 2.2416 0.93081 0.076566 -0.035176 0.0072217 0.027544 -0.0044312 0.44443 Amplification Peak 18 - CN values 17q25.3 chr17:67159433-81195210(probes 1344206:1350912) chr17:78530908-78541159(probes 1350122:1350130) chr17:46897534-81195210(probes 1332935:1350912) 7.0388e-08 7.0388e-08 Actual Copy Change Given 0.78504 1.0852 -0.38011 -0.087844 0.50463 0.54291 0.4932 -0.03395 -0.017803 0.0086135 -0.025483 0.3082 0.88266 0.04344 -0.020275 -0.015466 0.020763 -0.0095426 -0.079343 0.13421 0.21376 0.73322 0.43783 0.62551 -0.62159 -0.029584 -0.0016517 0.24187 -0.21763 -0.18173 0.0032603 0.1679 -0.39969 0.36861 0.15816 -0.0056108 -0.023977 -0.00069303 0.15144 -0.50379 0.38171 -0.0013858 0.71791 0.035806 0.064368 0.41507 -0.03054 0.0041632 -0.10013 0.010873 0.0098669 0.014901 0.6766 0.015028 0.45071 -0.031359 -0.034495 0.091374 0.085943 1.1338 -0.028765 0.33453 0.12889 0.0063729 0.008568 -0.72526 -0.0080244 -0.00055444 -0.028901 0.29803 0.16865 0.012376 1.9117 0.58937 -0.060076 0.059366 -0.047395 0.58811 -0.0098185 1.2871 -0.05442 -0.010232 0.027076 -0.013815 -0.84034 0.62262 -0.49583 -0.15656 -0.01904 0.56685 -0.53409 0.45139 -0.0023553 0.93087 -0.48743 -0.0069195 -0.26877 0.36231 -0.23936 1.0906 -0.041132 0.7057 -0.003207 0.75438 0.15771 0.008269 1.1868 0.020483 0.8287 -0.059538 0.45615 0.026233 0.11932 0.051245 -0.090096 -0.034086 0.22993 -0.019253 -0.0019399 0.041465 0.0094491 0.24591 -0.012024 -0.3525 0.33189 0.17181 -0.036674 0.74899 0.71039 0.089561 0.0018773 1.2775 0.49586 -0.034904 -0.032314 -0.011887 -0.41201 0.42839 -0.11704 0.037359 0.14488 1.6571 0.078727 0.53925 0.51986 0 0.16017 0.055534 -0.018147 0.61952 -0.092609 -0.62963 0.013213 -0.058462 0.038489 0.026092 0.48871 0.49926 0.15726 -0.041488 0.020763 0.1252 0.35479 0.0043021 -0.015202 -0.016388 0.43456 -0.01354 -0.08905 0.48544 0.59152 -0.03892 -0.37921 -0.037218 -0.14298 -0.56853 0.24435 0.025581 -0.12629 0.50394 0.0013868 -0.032996 -0.22207 0.34746 0.57255 0.017824 0.016146 0.00027728 0 0.61027 0.91521 -0.7596 0.2442 0.35104 0.77445 0.016217 -0.20304 0.060222 1.27 0.028341 1.5517 -0.010646 -0.04115 -0.027535 0.085221 0.075128 0.71754 -0.27314 -0.92163 0.3738 -0.42696 -0.058117 0.03863 0.11785 0.47824 -0.28869 -0.014503 0.047925 -0.0035073 -0.014339 -0.0089906 -0.039801 0.1652 -0.021373 -0.5432 0.77791 -0.071056 0.048972 -0.033814 -0.8119 -0.034631 0.9365 -0.015054 -0.0067813 0.58202 -0.15093 0.99477 0.30409 0.019923 0.52713 -0.0258 0.88346 -0.034768 -0.031086 0.020203 -0.0036011 2.5689 0.77485 0.30937 0.053806 -0.083419 1.2698 -0.1732 -0.049559 -0.036129 -0.33514 -0.026577 0.36346 0.076854 0.6926 -0.022058 0.0099027 0.87886 0.31578 0.018103 -0.024524 0.016705 -0.14952 0.010564 -0.0049025 -0.014366 -0.046989 0.34047 -0.029268 -0.034223 -0.018902 -0.32019 -0.0055375 3.4911 0.32818 0.0066653 0.95365 0.021245 -0.12408 0.63317 0.59494 -0.17752 -0.092996 -0.011749 0.032595 -0.53246 0.024689 0.050392 -0.064583 -0.85242 -0.03885 0.02806 0.62697 0.48992 0.033127 0.077042 0.094637 0.00013863 0.0043021 0.021884 -0.02509 -0.058596 -0.050911 -0.016841 0.18798 0.0063253 -0.22182 0.93854 0.0033299 0.68663 0.028622 -0.020501 -0.0971 -0.01037 -0.021001 0.041458 -0.52879 0.12904 -0.024642 0.052952 -0.035448 0.0080567 0.39214 -0.14541 0.050819 0.010982 0.63975 0.07096 -0.30059 0.87269 0.38535 -0.034168 0.61592 0.0084743 0.06659 0.035947 0.36313 2.4586 0.49441 0.38766 0.066086 0.021463 -0.013677 -0.0037395 -0.013127 -0.037454 0.0084743 -0.52809 -0.60844 0.29787 1.0614 0.30186 0 -0.058734 0.017264 -0.04583 0.051814 -0.2989 -0.0029091 0.030732 -0.067726 0 Amplification Peak 19 - CN values 20q13.33 chr20:54375868-63025520(probes 1448885:1454031) chr20:61970177-63025520(probes 1453975:1454031) chr20:61706751-63025520(probes 1453909:1454031) 0.058021 0.058021 Actual Copy Change Given 0.78755 0.004242 0.49545 0.10074 1.0938 0.01235 -0.011335 0.57023 0.013911 0.017963 -0.0123 1.6568 0.0029133 0.011818 -0.03681 -0.013402 0.00055459 0.6025 0.44715 -0.0084385 0.79181 0.24887 0.88586 0.40101 0.85739 0.22206 -0.0020784 0.49943 0.13939 0.042263 0.39371 -0.015604 0.36526 0.37858 0.18995 0.018169 0.00069327 0.47341 0.1637 0.34975 -0.010232 -0.023977 0.014888 0.22314 0.88186 0.4901 -0.0075396 0.030169 1.217 0.013492 0.51107 0.68161 0.076135 0.86215 -0.024114 -0.029857 0.70476 0.56659 0.51978 0.034536 0.51107 0.01661 0.12859 0.26652 -0.038214 1.1325 -0.00027724 0.90633 0.77156 0.25293 0.022024 0.91339 0.56383 0.54683 -0.024661 0.063366 0.001803 0.64414 0 0.00041593 0.60503 0.045991 -0.024251 0.17498 -0.017803 0.25449 1.1702 0.46383 -0.01409 -0.016567 0.14771 -0.026441 0.39662 -0.45233 0.53696 0.0066653 0.018943 1.1645 0.051956 0.63372 -0.035857 -0.019177 -0.0066642 0.029788 0.38998 -0.098656 0.069239 -0.018216 0.048031 -0.075745 0.93467 0.031014 0.084354 0.031053 0.049824 1.0363 0.74918 0.0070826 -0.0051227 0.15233 -0.026167 0.32414 0.031295 0.33513 0.063504 0.0037465 0.27916 1.5196 -0.01904 1.2761 0.05987 0.041024 0.50175 0.020623 0.82588 -0.0098185 0.012934 1.0838 1.1268 -0.15477 0.086377 0.39012 0.099579 0.075703 0.41336 0.015028 0.5561 -0.010922 0.29247 -0.032608 0.16595 0.10162 0.0036076 0.97708 -0.014916 0.57969 0.98328 0.49044 0.049682 -0.04211 0.20901 0.13806 0.31434 0.033127 -0.052284 -0.046041 0.43092 0.67345 0.42864 0.90357 0.0016642 0.0029806 0.0065262 0.45394 0.47186 0.46536 0.2484 0.22212 0.35072 0.011679 -0.0024938 -0.0087146 0.23907 3.0051 0.024303 0.056228 -0.0086049 0.010006 0.093766 0.020763 0.88482 -0.077612 0.065083 0.96781 0.78196 0.42276 0.11492 0.10643 1.2825 0.84652 1.5615 -0.0029091 0.99386 -0.0030475 0.46348 0.029184 0.30393 1.0635 0.04791 0.41731 0.49711 0.0032689 0.042166 0.10089 0.45805 0.62679 -0.017116 0.29835 -0.0083449 0.21901 0.036935 0.36904 -0.37019 -0.016567 0.52398 -0.0085766 0.39712 0.028697 1.213 1.8844 0.84002 -0.0094046 -0.017529 0.1252 0.0076392 -0.0053992 0.35977 0.40344 0.016565 1.0384 0.51293 0.006109 -0.10709 0.20152 0.066086 0.0091705 0.0015255 0.053762 1.1399 0.39446 0.041649 0.47152 0.13764 0.28685 0.92209 0.99821 -0.060748 -0.020658 0.0083351 0.095217 0.35528 0.003921 0.00027728 0.24156 0.031295 0.23101 0.020063 0.1041 0.54365 0.3866 -0.028081 0.60198 0.39263 3.5141 0.020483 0.91743 -0.0076101 1.4536 0.73587 0.52101 -0.0047079 0.15457 0.013213 0.57898 2.3008 0.57541 0.098706 1.015 -0.021921 0.041175 0.85502 0.040326 0.47959 0.24956 0.031155 -0.022195 0.022444 3.6569 0.49545 0 0.082953 0.036935 -0.0016629 0 0.37611 -0.0076101 0.19041 -0.01354 0.53661 0.23287 0 0.1664 0.13347 0.41932 0.4894 -0.3904 -0.031038 0.75662 -0.016429 1.4879 0.18662 0.75414 0.72622 -0.015172 0.27316 0.86564 0.16145 0.36453 0.97358 0.017963 0.0083351 0.0023581 -0.31436 0.042247 -0.0060904 0.95304 -0.040562 0.019391 0.036794 0.77955 0.035242 0.38171 0.85383 1.72 0.022585 0.084835 0.94282 0.70682 -0.0015243 0.045708 1.1168 -0.0019399 0.43024 0.55744 0.0020805 0.0024691 0.67011 0.025812 0.6997 -0.0095426 -0.029175 0.47924 1.0999 1.4086 0.028481 -0.029721 0.010703 Amplification Peak 20 - CN values 22q13.2 chr22:41468899-41849552(probes 1485944:1486268) chr22:41539943-41597533(probes 1486043:1486162) chr22:37331306-48364236(probes 1484063:1490369) 1.0172e-08 1.0172e-08 Actual Copy Change Given -0.015191 0.025751 0.10176 -0.0037395 0.53239 0.033241 0.0049969 -0.054825 0.058651 0.018103 -0.54935 0.33734 0.016006 0.016146 0.0013868 0.3633 0.0029133 -0.011335 0.75242 0.15786 0.83667 0.079303 0.42032 -0.46334 0.096816 0.013409 0.00097064 0.23892 -0.055634 1.4013 0.43454 -0.01409 0.016146 -0.034223 0.14563 -0.026521 0.094056 -0.0081624 0.13954 0.28788 -0.022744 0.0063871 0.70382 -0.073209 0.67604 1.0814 -0.047666 -0.0012473 0.94405 -0.0023553 0.015866 0.044148 0.011379 -0.052396 1.0659 1.2733 1.1386 -0.83013 0.1202 0.40361 0.022444 0.20539 1.4603 0.0012338 -0.022651 1.5463 0.40594 0.015308 -0.039801 0.1592 -0.1945 -0.29438 -0.040752 0.55567 -0.06424 0.07988 -0.025209 0.87667 -0.3531 0.028763 0.55762 0.015308 0.14117 0 -0.064508 0.44416 0.24291 0.36838 -0.010232 0.45377 0.14926 0.60684 0.45649 0.5102 -0.47162 0.0098669 0.027076 0.72376 0.40794 0.5428 0.35153 -0.040752 -0.0036222 0.03908 0.58991 0.021957 0.54206 0.0351 -0.86944 -0.090252 1.5062 -0.0073339 -0.22108 2.0668 0.77676 0.49182 0.47067 -0.0076491 -0.005261 0.16295 -0.061958 0.9138 0.79975 0.34167 -0.029311 -0.019863 0.034818 1.387 -0.056712 0.013353 0.021538 0.065074 0.47244 -0.032314 0.003191 0.0015255 -0.42495 -0.049019 -0.10972 0.082765 0.060651 2.3991 1.1637 0.41664 -0.094136 0.11008 0.52038 0.013353 -0.011611 -0.033269 0.13717 0.161 0.01419 -0.0030475 0.77772 0.16235 1.0036 0.54683 0.054803 -0.025072 0.043582 0.1652 0.28961 0.0013868 0.0040243 -0.0029091 0.41747 0.69409 0.41287 -0.45479 -0.035312 0.0011765 0.023566 -0.050506 0.041875 0.91582 0.25308 0.046893 -0.0083005 0.021043 0.68515 0.026514 -0.21528 0.021323 0 0.41145 0.03551 0.0062481 -0.9666 1.5813 -0.024661 1.2886 0.23318 0.9674 -0.035993 0.26789 0.30282 0.12285 -0.075211 0.11807 0.52844 0.00597 0.73342 -0.031632 0.05694 0.070243 0.17377 1.0396 -0.0038054 -0.23432 0.65729 0.27152 0.038347 -0.064911 -0.079591 0.040044 -0.022744 0.014888 -0.009449 0.0080834 0.018103 1.5404 2.2114 -0.56445 -0.5095 -0.036946 0.78408 -0.46493 -0.05442 0.29995 0.39562 0.0019418 -0.020275 -0.13781 0.01419 -0.071472 1.3836 0.48045 0.0075 0.020483 -0.037227 -0.01849 0.80195 0.66919 0.01447 0.025812 0.37068 -0.00069303 -0.019088 0.00069327 -0.044774 0.4144 0.13261 1.4231 0.46263 1.1519 -0.044551 -0.039665 0.25965 0.05281 3.4519 0.013389 -0.82081 -0.20896 1.161 0.040326 -0.0076101 -0.048613 0.10643 0.33215 -0.03817 -0.063166 1.1828 3.5664 0.007378 1.7617 0.29469 -0.87244 3.2865 0.50677 0.020623 0.15442 0.027638 0.28137 0.32947 1.1377 0.27395 1.2409 -0.028765 -0.93161 0.41999 3.3289 0.56294 -0.00090888 0.09043 -0.039258 0.034113 0.62442 0.48354 0.04344 0.10224 0.087679 0.00013863 0.00597 -0.10557 -0.03245 -0.030131 -0.055499 0.51438 0.53046 -0.13742 0.35218 0.12358 0.41312 0.4605 -0.37471 -0.046806 0.69821 -0.019177 -0.21618 0.11301 0.669 -0.079476 -0.02349 0.26592 -0.048748 -0.021098 0.71999 0.78891 0.027076 -0.23239 0.63463 0.086973 -9.2395e-05 0.006109 -0.48995 -0.062038 -0.023949 0.0030928 0.12857 0.070099 0.0049969 0.0114 -0.8213 0.6779 0.10686 -0.016567 0.34486 -0.0015243 0.038771 -0.68042 0.0114 0.013492 0.50672 -0.0066432 -0.020577 0.97859 0.013772 3.6569 0.77003 -0.055499 0.12035 0.60955 0.0044411 0.019083 -0.033405 -0.0028249 Deletion Peak 1 - CN values 1p36.31 chr1:1-6847369(probes 1:2218) chr1:5619360-6281666(probes 1545:1963) chr1:1-24844996(probes 1:11723) 5.1876e-09 2.6302e-07 Actual Copy Change Given -0.016141 0.016365 0.10687 0.26891 -0.60477 0.034792 -0.5065 -0.0070576 0 0.0077783 -0.03885 -0.066429 0.019865 0.013911 -0.021098 -0.020412 -0.023977 -0.010508 0.41861 0.0081644 -0.092742 0.23535 -0.059942 0.024829 0.050108 0.022865 -0.63434 0.005963 0.16595 -0.21182 0.017893 0.11374 0.3799 -0.0034627 -0.74159 0.010908 0.020203 0 0.22022 -0.96731 0.97605 0.0073844 0.0079175 0.11991 0.023706 -0.16857 -0.049559 -0.021017 1.3188 0.0065289 0.0040243 0.053806 -0.0015243 0.0093098 0.0070222 -0.063838 -0.20747 0.55293 -0.10565 -0.78032 -0.0078863 0.0015701 0.028481 0.12769 0.0012027 0.14748 0.0043021 -0.012576 -0.96631 -0.59565 0.061079 0 -0.019589 -0.011198 -0.066839 0.059937 -0.035585 -0.099604 0.0026546 0 -0.8079 0.16535 -0.024524 -0.014503 -0.82146 -0.095252 0.69815 0.77099 -0.0020784 0.0015255 0.088403 0.64728 -0.22305 0.037076 -0.48512 0.0038854 0.027357 -0.52133 0.089996 0.050108 0.061651 -0.04798 -0.0016162 0.021504 -0.26023 -0.15981 0.92027 0.04259 0.0099196 0.29995 -0.014228 0.0051359 0.70926 0.041034 -0.081738 -0.60032 0.2153 0.00097064 -0.0026322 0.16685 -0.0086243 -0.45648 0.041458 -0.3311 0.14191 -0.62808 0.26702 -0.023018 -0.09089 0.2087 0.0064154 -0.63699 -1.2929 -0.031905 -0.018507 -0.91424 0.03031 -0.41058 0.39364 0.2035 0.035806 0.64543 0.055515 -0.05037 -0.072213 0.015866 -0.37804 0.0093098 0.25043 -0.0095426 0.15771 0.40677 0.010564 0.010424 0.050819 0.10045 0 0.48406 0.045424 -0.017666 -0.16115 -0.17967 -0.34271 0.015168 0.00038026 -0.0051227 -0.094765 -0.0026322 -0.55478 0.67511 -0.43669 -0.019934 0.0095883 0.027638 -0.48628 0.32878 -0.05725 0.027969 -0.014641 -0.56206 -0.0067379 0.012795 0.075883 -0.35076 0.0051712 0.10982 -0.5291 0.0051359 0.45224 -0.0019399 0.42267 0.68143 0.2904 -1.1847 -0.044009 0.34527 0.29072 -0.23937 -0.088318 -0.38425 -0.085062 -0.79894 -0.067448 -0.017116 -0.22392 0.033267 0.0081959 0.61933 0.048904 -0.92516 -0.062553 0.064448 0.015133 -0.0053992 0.23413 0.071391 -0.029761 0.034113 0.014939 0 0.02525 -0.0040162 -0.16904 -0.55407 0.015727 0 -0.59925 0.04429 -0.066922 0.097542 -0.020824 0 -0.017941 0.00013863 0.015168 -0.25116 1.2938 0.045566 0.024871 -0.0069195 -0.57709 -0.9716 -0.031763 0.65204 -0.45458 -0.0071597 0.41095 -0.40473 -0.35312 -0.11103 -0.045994 1.1941 -0.15871 0.15248 -0.55965 0.65259 -0.88997 0.11976 0.17302 -0.065716 -0.083067 0.028236 -0.80829 -0.60632 -0.68661 -0.20037 -0.0098185 0.035524 -0.10487 0 0.05908 -0.044957 -0.07873 -0.04003 0.022304 -0.0008316 0.20103 -0.90029 0.75796 0.10848 0 0.082332 0.016985 -0.071606 -0.28156 -0.047124 -0.22158 -0.12244 -0.04287 0.10497 0.53907 0 0.47324 -0.15305 0.11096 -0.046041 -0.58872 -0.13794 -0.52675 0.026216 -0.76704 -0.53551 0.056228 0.010564 0.0034687 0.02511 0.4463 -0.0045695 -0.029038 0.09827 0.46947 0.13806 0.019923 0.01447 -0.57516 0.41597 0.65873 -0.050641 -0.016154 -0.021413 0.99945 0.00069327 -0.072274 0.27019 0.2939 -0.065343 0.043157 -0.072942 -0.067324 -0.94108 -0.0081624 -0.0037395 0.093766 0.012981 0.0081959 0.035383 0.29864 0.66294 -0.0013858 0.093551 -0.0041451 -0.0012473 -0.013127 0.11932 0.16554 -0.36906 -0.53825 -0.44795 -0.0052834 0.0081959 -0.053912 0.0040243 -0.010094 0.59656 -0.27452 -0.1267 -0.4012 -0.021784 -0.045909 -0.0008316 0.76676 -0.2939 0.12741 -0.44728 0.018523 -0.024251 0.39255 Deletion Peak 2 - CN values 1p22.1 chr1:82457075-119426205(probes 44788:66833) chr1:93289794-93313902(probes 51514:51524) chr1:76088641-119751001(probes 40953:67013) 9.7877e-07 5.7939e-06 Actual Copy Change Given 0.0051359 0.035322 0.10687 -0.24495 0.031436 0.0011132 -0.50432 -0.0070576 0 0.0077783 -0.50443 -0.52382 0.019865 0.013911 -0.61153 -0.39642 -0.023977 -0.010508 0.41861 0.0081644 -0.32681 -0.27152 0.014858 -0.005261 0.044999 0.022865 0.0093777 0.14965 -0.34847 -0.16514 0 0.11374 0.3799 -0.0034627 0.14073 0.013418 0.020203 0 -0.52604 -0.47246 0.005511 0.0015255 -0.79961 0.11991 0.023706 -0.13295 0.0073609 -0.021017 1.3188 0.010769 0.0040243 -0.011611 -0.0015243 0.0093098 0.0070222 0.013353 -0.20535 0.4308 -0.10105 -0.45937 -0.0078863 -0.34809 0.11242 0.12769 0.0012027 0.22854 0.0043021 0.0044411 0.0081959 0.65406 0.061079 -0.3401 -0.019589 -0.016631 -0.76681 -0.097891 0.00083195 0.0076392 0.0558 0 -0.015604 0.23272 0.29135 -0.56753 -0.7553 -0.010066 0.69815 0.77099 0.0086135 0.0069571 0.088403 -0.0048552 -0.22305 0.0019302 -0.5096 0.0038854 0.0081616 -0.43691 -0.6215 -0.10552 0.061651 0.019643 -0.0016162 -0.016762 -0.35065 -0.15981 -0.41904 0.017404 0.0099196 -0.3356 -0.014228 0.0070692 -0.32263 -0.004612 -0.08416 -0.5431 -0.16841 0.009925 -0.0026322 0.16685 -0.0086243 -0.3592 -0.00055444 -0.3267 0.14191 0.008892 0.1283 -0.023018 0.003191 -0.66235 0.0049832 0.0027652 -0.58839 0.73454 0.0015255 0.0087528 -0.49767 -0.82725 0.39364 0.2035 -0.0025542 2.7542 0.96206 -0.05037 0 0.015866 -0.37804 0.0093098 -0.31984 0.039619 0.17392 0.36282 0.010564 0.010424 0.13036 0.082909 0 0.0024969 -0.59419 0.0072217 -0.13794 0.18631 0.54488 0.015308 0.0020805 0.028341 -0.029584 0.003191 -0.5266 0.94987 -0.43669 0.0054812 0.0095883 0.022361 0.0037806 0.46588 -0.026577 -0.048521 -0.014641 0.51874 0.00083195 0.012795 0.054376 0.01419 -0.012403 0.2369 -0.5291 0.0051359 0.53311 -0.0019399 -0.22051 0.80014 0.2904 -0.47564 -0.0055375 0.34527 -0.038714 -0.23015 0.011958 -0.38549 -0.016841 0.010146 0.27018 -0.88038 -0.19812 0.033267 0.0081959 0.61811 0.048904 0.30665 0.031485 0.064448 0.015133 -0.0053992 0.061456 -0.60867 0.013492 -0.10224 0.014939 0.14254 0.02525 -0.0040162 -0.16904 -0.54703 0.054376 0 1.1619 0.50857 0 -0.8179 -0.4867 0 0 0.00013863 0 -0.27344 -0.49195 0.075189 0.029606 0 -0.49822 0.016845 0.0020805 -0.45651 -0.45458 -0.0011087 -0.020824 -0.34458 -0.33629 -0.11103 0 1.1248 -0.0016796 0.15248 -0.53571 0.14453 0.04883 0.11976 0.13314 -0.087579 -0.013775 0.0021882 0.011539 -0.49267 0.011539 -0.20037 -0.0098185 0.045863 -0.10487 0.10229 0.05908 0.0023042 -0.016841 0 0.022861 -0.0008316 0.23442 -0.86476 -0.027124 0.062365 0 0.26357 0.0033299 -0.38269 -0.26769 0.59314 -0.22158 -0.03286 -0.014366 0.030873 0.59314 0.051245 0.47324 -0.15305 0.043538 0.0086135 0.57791 -0.0031859 0.58668 0.026216 0.016551 -0.53551 0.056228 0.00041593 0.0036076 0.02511 0.47461 -0.93622 0.013492 0.1685 0.51333 0.13806 0.013213 -0.0015243 -0.55186 0.42032 -0.0043828 -0.85058 0.0066653 -0.54313 -0.74386 -0.84835 -0.072274 0.27019 -0.35547 -0.0066432 0.025348 0.0052749 -0.344 0.00013863 -0.0081624 -0.0037395 0.036794 -0.60339 0.0081959 -0.50919 0.1932 0.66405 -0.0013858 0.11426 0.10497 -0.0012473 -0.0066432 -0.81005 -0.029175 -0.36906 0 -0.42211 0.0027745 0.0081959 -1.2908 0.0040243 -0.010094 0.59656 -0.27452 0.36884 -0.4012 -0.0020784 -0.045909 -0.0008316 -0.48892 -0.30968 0.188 -0.44728 -0.74159 0.023286 -0.0062286 Deletion Peak 3 - CN values 2q37.3 chr2:239359581-242296448(probes 257766:259304) chr2:239748105-240337579(probes 258033:258202) chr2:226022553-243199373(probes 249878:259411) 3.1096e-12 3.1096e-12 Actual Copy Change Given 0.0086135 -0.004906 -0.048478 0.078976 0.48906 0.026347 -0.0053992 -0.050911 0.34844 0 -0.026988 0.35817 -0.26312 -0.0062286 0.012237 0.0037465 0.006109 0.00597 0.54771 -0.0073345 -0.39196 -0.6523 0.43332 -0.010784 -0.12875 0.0043021 -0.67177 0.023566 0.3543 0.30085 -0.047328 0.085799 0.36805 0.0040243 -0.69577 0.013139 0.0097296 -0.27081 0.19299 -0.03598 -0.012548 0.70008 -0.056981 -0.12616 -0.17436 0.48434 0 0 0.62715 -0.0034627 -0.015191 -0.82309 0.013198 0.057772 -0.80327 0.018803 0.50985 0.011053 0.096234 0.047268 -0.018902 0.00018316 0.12196 -0.17108 0.0052294 0.15547 0.0022193 0.0041632 0 -0.16726 -0.0013858 -0.11913 -0.00027724 0.50445 0.024829 -0.0011471 -0.0055375 -0.80053 -0.25604 -0.0030475 -0.0059522 -0.37898 -0.0081624 -0.06048 0.012376 0.18707 -0.44257 -0.071071 -0.0024938 0.036088 -0.032587 0.23411 -0.47247 0.00041593 0.02539 -0.0094046 0.0068044 -0.075988 0.20332 -0.71015 -0.020001 0.0031652 -0.001684 0.47397 0.34161 0.11763 -0.32936 -0.84235 -0.0078342 0.049682 0 0.0058309 -0.35533 0.0052764 0.026373 0.44918 0.24934 0 -0.010675 -0.069064 -0.023991 0.31263 -0.0083005 -1.1865 0.052099 0 0.0075 0.0066653 0.012376 -0.22092 -0.4619 -0.62954 -0.68402 -0.78184 0.41496 -0.011618 -0.33952 -0.38817 -0.19963 0.00597 -0.07203 0.53837 0.15636 0.057083 -0.43534 -0.95602 0.51863 0.0030567 0.2523 0.017963 0.36655 0 -0.00055444 0.14995 0.066658 0.040468 0.97812 0.0019418 -0.30639 0 0 -0.15029 -0.026851 0.0048134 -0.0015243 0 0.47223 0.56808 0.096599 -0.034904 -0.40274 -0.0085097 0 0.0072217 -0.072415 0.26891 0.31562 0 0.0079175 -0.0098185 -0.027449 -0.010646 0.05025 -0.13238 -0.00010336 -0.10395 -0.52635 -0.0011087 -0.0092666 0.00060305 0 0.0044411 0.21345 -0.75676 0 0.12057 -0.039122 0.07988 0 -0.022744 0.22422 -0.79059 -0.19073 -0.022469 -0.24423 -0.015329 0 -0.075078 -0.017869 -0.24582 0.35864 -0.068106 -0.20324 0.00083195 -0.14398 -0.47923 0.0012481 -0.3203 -0.0041991 0.085309 0 0.43361 -0.47934 0.12874 0.33513 -0.01849 0.361 -0.055769 0.022304 0.00064371 -0.0056757 0.31017 0.0072217 -0.12343 0.014609 0.045708 -1.0686 -0.31739 -0.0047479 0.35173 -0.42074 -0.0051878 0.0086135 0.047694 -0.00069303 -0.037082 -0.64424 -0.82481 -0.2497 0 0.11028 0.64965 0.086693 -0.16828 0.00013863 -0.028491 -0.041295 -0.025072 -0.006505 -0.31541 -0.011473 0.0043378 -0.78235 -0.16654 -0.65994 -0.20622 -0.052666 0.12712 0.0051359 0.054033 0.0054139 -0.0013173 0.36379 0.019407 -0.011749 -0.0020784 0.016286 -0.87197 -0.019177 -0.4192 -0.0019399 -0.17082 -0.026154 -0.00027724 0.039761 0.012795 0.062651 0.5338 -1.022 -0.96445 -0.080408 -0.3424 0.54206 0.034176 0.0016642 -0.0048461 0 -0.029824 -0.32077 0.018243 -0.8901 -0.00013862 0.0013197 -0.0019399 -0.067224 0.020903 0.0072217 0.0058309 -1.25 0.021183 -0.84459 -0.20361 0.088403 0.037076 -0.55286 0 0 0.020763 0.0024969 0.030973 0 -0.88542 0.13317 -0.24251 -0.10684 -0.074945 0.69989 0 0.33869 -0.004497 0 -0.025893 -0.30803 -0.27412 -0.83325 0.0030522 -0.13861 -0.047638 0.0084743 0.047058 0.044148 0.00013863 -0.38895 0.068378 -0.032314 -0.81277 0.0070826 -0.99965 0.013353 -0.023566 -0.054047 -0.0008316 0.33804 -0.63784 -0.12304 -0.64125 0 0.011958 0 0.71058 -0.63015 -0.20037 -1.0112 -0.92681 -0.040888 -0.87393 0.010006 Deletion Peak 4 - CN values 3p25.1 chr3:1-62385826(probes 259412:293611) chr3:15080047-15111124(probes 267172:267183) chr3:14887911-15100814(probes 267049:267180) 0.13887 0.14037 Actual Copy Change Given -0.00021727 0.059589 0.030873 -0.24703 0.015492 -0.00071938 -0.5009 -0.61027 -0.0023553 -0.13445 0.021323 -0.061866 -0.07067 -0.0041546 0.019503 -0.40562 0.17498 -0.0016945 0.805 0.0084743 -0.0019399 0.0030522 -0.013264 0.40744 -0.096176 0.0022193 0.008892 0.031718 -0.32878 0.079546 -0.00090108 -0.0076101 0.41396 0.010564 -0.73047 -0.80132 -0.012085 0.118 0.11536 -0.044673 0.38155 0.036229 0.0045435 0.22161 -0.017803 0.92201 0.05466 0.022304 -0.076545 -0.0038779 0.0075 -0.010118 0.030873 0 0.016286 -0.65389 0.12491 0.02448 0.11594 -0.0063668 -0.53622 -0.34611 0.071554 0.26152 0.0089857 0.31688 -0.0016629 -0.0056757 0.0070826 0.21972 0.19771 -0.035176 -0.62083 0.54065 0.00458 0.040892 -0.004221 0.073402 0.075559 0.0062481 0.027216 -0.22724 0.0022193 0.03031 0.016146 -0.31937 -0.15315 -0.050921 -0.0026322 0.0080567 -0.55255 0.0093098 0.0043021 0.00013863 -0.4381 -0.0013858 -0.27619 -0.43214 0.021043 0.59728 0.020203 0.010285 0.0055317 -0.044783 0 0.18624 0 0.0029133 0.02741 -0.33929 -0.016017 -0.0087146 -0.31342 -0.016154 0.18117 0.61353 -0.25092 0.09275 0.0043021 -0.042788 0.0068044 -0.37739 0.0029133 0.3382 -0.023429 -0.020412 0.059651 0.71829 0.015168 0.19266 -0.4572 -0.67472 0.59328 0.026935 0.017544 0.015028 0 0 -0.027808 -0.1272 0.77022 0.52715 0.64066 0.042166 -0.10979 0.033831 0.56924 0.62952 0.5998 -0.69188 0.18308 0.79917 0.0075 0.0066653 0.053338 0.037076 0.018103 -0.0087146 0.095217 0.0055529 0.083198 -0.15146 0.33011 0.024829 0 0.0027235 -0.021598 0.70363 0.044079 0.3306 0.058795 0.023774 -0.0013858 0.014779 0.2163 -0.56595 -0.3634 -0.097317 0.013591 -0.56863 0.0023581 -0.8347 0.059937 -0.36714 -0.002597 -0.036538 -0.0089906 -0.0077482 -0.0089906 -0.014778 0.23426 0.0090525 -0.039937 0.026514 0.00171 0.10339 -0.20635 0 0.015168 0.010564 0.28802 0.0020805 0.017347 0.01547 -0.21735 0.0029133 0.11374 -0.27774 0.017477 0.27947 -0.38609 0.019721 0.043723 0.18041 0.45754 0.034818 -0.55327 0.090575 0.012909 0.013256 0.025979 0.031436 0.042024 0.0037465 -0.14348 0.0085445 0.42839 -0.48649 0.040609 -0.82383 -0.021098 0.014609 0.00013863 -0.00027724 -0.62655 -0.28584 0.012022 0.084354 0.021463 0.0029133 -0.52842 0.020203 0.0066653 -0.22441 0.010424 -0.0080244 -0.0053992 0.1434 0.15412 0.029747 0.11321 -0.013677 0.35497 -0.31821 0.013632 -0.39018 0.035383 -0.10636 -0.10342 -0.015741 0.6016 -0.00079605 0.013492 -0.51386 0 0.20183 0.013492 -0.16192 0.0016642 0.082706 0.013353 0.0097276 -0.022381 0.0044854 0.014888 0.0068044 0.015866 0.025952 0.77349 -0.31867 0.00097064 -0.70181 0.0062481 -0.01409 0.068522 0.0065262 0.09856 0 -0.0038779 0 0.40827 0.056633 -0.036265 -0.16059 0.010703 -0.011423 0.0022193 0.23628 -0.019798 0.028903 -0.2203 -0.3894 -0.0031859 0.0052749 -0.051181 -0.62779 -0.18836 -0.94294 0.53834 -0.056173 0.43034 -0.20349 0.23798 -0.021618 -0.0048461 0.040609 -0.0094919 0.01433 0.0033299 -0.56189 0.16956 0.81454 -0.069724 0.33499 0.13421 0.0091705 0 0.00597 0 -0.77209 0.015447 0.0029133 0.080312 -0.60938 0.0015255 -0.084422 0.019279 -0.85105 -0.014318 0.072615 0.065799 0.35051 -0.92279 0.10074 0.7778 0.029888 0.51054 0.0054139 -0.0020784 0.017264 -0.014108 -0.0041546 -0.50173 1.0857 0.0055529 -0.0043206 0.35494 -0.14785 -0.02658 0 0.065942 -0.35499 0.085799 -0.93592 0.076422 -0.89871 -0.00097017 Deletion Peak 5 - CN values 3q13.31 chr3:116297365-118620828(probes 322519:324150) chr3:115528065-117719768(probes 321964:323595) chr3:116199804-116963206(probes 322448:323062) 2.6302e-07 2.6302e-07 Actual Copy Change Given -0.00021727 -0.026363 0.027863 0.0051359 0.0022193 -0.033201 0.017684 -0.60041 -0.0023553 -0.13445 0.030591 0 -0.010094 -0.0041546 0.022865 0.017264 0.25199 0.006897 0.33918 0.0084743 0.0080567 0 -1.2929 0.39715 -0.73582 0.0087528 0.010285 0.29247 0.15352 0.086687 -0.00090108 0.0055529 0.41396 0.010564 0.22561 0.011326 -0.012085 0.118 -0.053881 -0.051438 0.00083195 0.036229 0 0.23876 -0.017803 0.93135 0.056228 0.022304 -0.063288 -0.0038779 0 -0.010118 0.030068 0 0.018663 0.04344 0.12491 -0.0055077 -0.67361 -0.0063668 -0.53622 0.032467 0.09987 0.26355 0.0089857 0.31688 -0.0016629 -0.0056757 0.0012481 0.21972 0.1914 -0.69947 -1.2463 0.54065 -0.76962 0.034536 -0.0022168 0.067375 0.075559 0.0062481 0.027216 -0.23997 0.0022193 0.03369 0.048972 -0.30487 -0.1768 1.0642 -0.0026322 0.0075 0.11682 0.011121 0.0043021 0.00013863 -0.45725 -0.0033243 -0.28156 -0.41377 0.021043 0.61317 0.020203 0.010285 0.0055317 -0.044783 0.37693 0.18624 -0.67967 0.0029133 0.026005 -0.75297 0.004719 -0.0049844 -0.61316 -0.013013 0.18117 -0.0078863 0.56472 0.09275 0.0043021 -0.039801 0.0068044 -0.35019 0.0029133 -0.35213 -0.016292 0.50359 0.049398 0.71735 0.022585 0.19213 -0.43588 -0.044695 0.58169 -0.79695 0.017544 0.011261 0 0.00097064 -0.0081978 -0.1272 -0.88373 -0.017116 0.61854 0.042166 -0.13302 0.033831 0.56423 0 0.46041 0.02806 0.18308 -0.68031 0.0056919 0.0066653 0.053338 0.036871 0.010703 -0.0012712 -0.60148 0.0055529 0.083198 -0.13729 0.28881 -0.71951 0 0.0027235 -0.0067813 -0.88369 0.044079 0.35577 0.058795 0.016633 -0.0013858 0.014779 0.2551 0.69353 0 -0.097317 0.013591 0.0098669 0.0023581 0.012516 0.059937 0.045141 -0.002597 -0.03677 0.021744 0.48699 0.030732 -0.022332 0.24156 0.02806 -0.039937 -0.42517 0.013911 0.10339 0.11814 0 -0.74063 0.0091705 0.28802 0.0020805 0.49477 0.01817 -1.2929 0.028903 0.11374 1.0919 0.017477 0.27291 0.040831 0.019721 0.043723 0.18041 -0.1076 0.018663 -0.53693 -0.53073 -0.78995 0.013256 0.025952 0.033127 0.042024 0.0037465 0.30745 0.012934 0.43868 -0.49465 0.040609 -0.010784 0.44829 0.010842 0.00013863 -0.00027724 0.0016642 -0.44394 0.018588 0.084354 0.021463 -0.0080244 0.54201 0.020203 0.0021938 0.047126 0.010424 -0.0024938 0.38518 -1.0519 0.15412 0.040609 0.10664 -0.0092666 0.34798 -0.066386 0.016565 -0.027515 0.046559 -0.10636 0.19086 -0.3904 0.61208 -0.00079605 -0.005261 -0.5036 0 0.18404 0.00785 -0.023429 -0.0037395 0.087106 0.013353 -0.0019399 -0.022381 0.0027678 0 0.016425 0.015866 -0.85361 0.77233 -0.31867 0.00097064 -0.0067813 0.0062481 0.026795 0.068522 0.011958 -0.065447 0 0.0011093 0 0.64818 0.063652 -0.036265 -0.16144 -0.016292 0.022164 0.0022193 -0.56922 0 0.028903 -0.22129 0.011121 -0.0031859 0.0052749 -0.041431 0.076279 0.39629 -0.9371 -0.56942 -0.0023553 -0.0038779 -0.20349 -0.46206 0.38882 0.034959 0.030029 0.021271 0.01433 0.0033299 -0.56189 -0.076145 -0.87346 -0.069466 0.33369 0.13421 0.0091705 0.0062481 0.0087528 0 -0.029359 0.015447 0.0029133 0.066515 -0.60038 0.0015255 -0.076412 -0.004557 0.67979 -0.017636 -0.74381 -0.46302 0.35051 0.033813 0.10433 -0.20284 -0.012576 0.51909 0.028401 -0.0020784 0.0049969 -0.010954 0.00041593 -0.50287 1.1236 0.0055529 -0.0043206 0.36608 -0.14785 -0.02658 0 0.073977 0.040892 0.085799 -0.93783 0.076422 -0.87863 0.43328 Deletion Peak 6 - CN values 4p16.3 chr4:1-6275649(probes 365369:368103) chr4:3576499-3624138(probes 366364:366373) chr4:3582639-3627605(probes 366367:366377) 0.09333 0.090504 Actual Copy Change Given 0.0020805 0.024628 0 -0.071606 -0.61 0.60771 -0.50764 0.031577 -0.0019399 -0.0024938 0.028341 0.42312 -0.69351 -0.0048461 -0.64837 0.026233 -0.027671 -0.0082711 -0.13044 0.0066653 1.2405 0.0072217 -0.60352 -0.0060904 0 0.001803 0.017684 0.045249 -0.35886 -0.18664 -0.01025 -0.0094046 -0.0037395 0.0079175 0.25996 0.80043 -0.0033243 -0.0023553 -0.51053 0.37579 0 -0.0041546 -0.61518 -0.13316 -0.25443 -0.15034 0.0058309 -0.11339 -0.09089 -0.015604 1.027 -0.0077482 0.36362 -0.031223 -0.0089609 0 0 -0.5267 -0.043737 -0.018353 0.99343 -0.3404 -0.7476 -0.054434 -0.0043326 -0.19737 -0.0083005 -0.0041546 0.018103 -0.18433 -0.06056 0.41295 0.60178 -0.0049844 0.018803 0.43733 0.027778 -0.81794 -0.25055 0.003191 0.010285 -0.93637 0.0026357 0.049682 -0.76552 0.28344 0.23468 -0.67665 0.0049969 0.30266 -0.54562 -0.0063668 -0.014641 0.41245 0.0068044 0.0069435 0.0069435 0.025531 0.040044 -0.032723 0.1155 0.022585 0.0070614 -0.024348 0.83058 -0.19118 0.55797 -0.0085766 -0.85334 0.096961 -0.021443 -0.012576 -0.29367 -0.96953 0 0.48199 0.047552 0.0073609 0.00069327 -0.083864 0.018339 0.045282 0.0015255 -0.36862 -0.046583 0.011958 0.0048579 0.56546 0.042399 -0.22034 -0.45677 -0.37381 -0.00022517 0 -0.030614 -0.91576 -0.49673 -0.84564 0.0075 0.0033299 -0.98962 -0.17686 -0.20037 -0.052666 0.51376 0.020903 -0.01857 -0.00069303 0.028622 0.026514 -0.33502 0.09856 0 -0.066861 0.05912 -0.11339 0.013632 0.54877 0.027076 0.012097 0.054629 -0.18307 0.98928 0.018943 -0.0051227 -0.0016629 -0.5791 -0.0084385 -0.53292 0.41814 0.017824 0.01985 0.0080567 0.030169 -0.13704 -0.20436 -0.025346 0.013682 0.0011093 0.031577 -0.045635 0.010146 0.010395 0.038148 0.0087882 0.13391 0.025671 -0.0027707 -0.45415 -0.067324 0.24124 -0.69767 -0.01354 -0.50846 0.026092 0 0.12167 -0.57999 -0.047395 0 -0.064432 0.0011093 -0.41673 -0.012846 0.2686 0.054091 -0.072274 0.41362 -0.91976 0.33044 0.72123 -0.07006 -0.10039 0 0.27634 -0.28501 -0.0018014 -0.20709 0.033504 0.004051 -0.031359 0.020343 -0.056981 -0.55317 -0.48565 0.018383 -0.064106 0.54541 -0.010784 0.016565 -0.032041 -0.005814 0.0013868 0 -0.0030475 -0.11848 -0.5491 -0.061056 0.011679 -0.012057 -0.53025 0.043582 -0.97509 -0.46341 -0.46121 0.00069327 0.077718 0.69708 0.1658 0.012097 -0.1366 0.45598 -0.45766 -0.075612 0.018383 -0.019314 -0.84539 0.013632 0.038347 0.85482 -0.0077482 -0.0061931 -0.0015243 0.41379 -0.0084385 -0.35327 0.018663 -0.16625 -0.023429 -0.74259 0.016146 -0.012713 -0.010784 0.0044854 0.019503 0.020763 0.0093098 1.5601 2.8767 1.1409 0.00097064 0.1345 -0.61834 -0.0033243 0.067232 0.62151 0.099288 0.0055529 0.01419 -0.005814 0.95201 -0.10867 0.45564 -0.16326 0.021323 -0.79394 0.012376 0.00027728 0.0019418 -0.017254 -0.34328 -0.016567 0.00069327 -0.013728 0.15696 -0.63736 -0.17626 -0.48029 0.15995 -0.058058 -0.51383 0.0054139 -0.49694 -0.010578 0.42234 -0.37324 0.018292 0.0087528 0.0076392 0.024788 0.25802 -0.90628 -0.056846 0.017144 -0.0078863 -0.026304 0.02511 0.0095883 0.17724 -0.0096806 -0.0013858 0.0084743 -0.28465 0.028106 -0.0081624 -0.52379 0.020259 -0.029264 0.058795 -0.16415 -0.49423 0 0.020203 -0.34125 0.018663 0.051672 -0.57417 0.017892 0.46417 -0.013953 0.176 -0.0023553 -0.51022 0.014147 -0.19236 0.0026079 0.00013863 0.037217 -0.044554 0.0012481 0.83687 0.51176 -0.26708 0.030169 -0.81582 -0.0012473 -0.039584 Deletion Peak 7 - CN values 4q34.3 chr4:179280062-182757119(probes 463168:464861) chr4:181521852-182082855(probes 464314:464317) chr4:180598680-191154276(probes 463652:467508) 1.3613e-15 1.3613e-15 Actual Copy Change Given 0.0020805 -0.0022768 0 -0.13329 -0.57644 -0.041728 -0.50764 0.023847 -0.01387 -0.0085766 -0.49548 -0.048115 0.0024969 -0.014916 -0.010232 0.017264 -0.027671 0.0090312 -0.10171 0.0066653 0 -0.31984 0.53538 -0.014002 0 0.001803 -0.0048461 0.053948 -0.35886 -0.43456 -0.0079555 -0.0077482 0 0.015447 0.21591 -1.2929 -0.0033243 -0.0023553 -0.51053 0.35873 -0.0026322 -0.011335 -0.00041585 -0.13342 0.47873 -0.13191 0.0055529 -0.11339 -0.019726 -0.015604 0.0041632 -0.030677 -0.26853 -0.023429 0.013911 0 0 -0.0028381 -0.03245 -0.027124 0.44514 0.31134 -0.73108 -0.016909 0 0.78003 -0.0083005 -0.0018014 0.018103 -0.18433 -0.15375 0.50672 -0.65668 -0.0049844 -0.10171 0.4951 0.014888 -0.72172 -0.2193 -0.0096806 0.027076 0.0063871 0.0026357 -0.043059 -0.74699 -0.30251 0.23019 -0.68013 0.0049969 0.39845 -1.2929 -0.49746 -0.007107 0.38733 0.0026357 6.106e-05 0.010564 -0.42527 0.0081959 -0.01647 0.11374 0.044999 0.0070614 -0.024348 -0.24082 -0.19118 -0.70827 -0.015604 -0.84464 0.10449 0.0016642 -0.0047079 -0.31552 0.88206 -0.00055444 0.5135 -0.86499 0.0042492 0.0076392 0.09275 0.023145 -0.33168 -0.0084385 -0.33768 -0.81137 0.0054139 0.013772 0.026373 0.046275 -0.20622 0.91229 0.34908 -0.63742 -0.017803 -0.019578 0.016565 -0.49673 0.56045 0.0075 0.52573 0.68887 0 -0.21156 -0.046041 0.51376 0.020903 -0.034165 0.013353 -0.2894 0.026514 -0.33502 -1.2929 -0.011749 0 0.090505 -0.11339 -0.51218 0 0.0038854 0.003191 0.029325 -0.15594 -0.39286 -0.0070576 -0.0051227 0.0033299 -0.61335 -0.0084385 -0.53292 0.38982 0.017824 0.025739 -0.0087146 -0.53764 -0.13893 -0.50266 -0.025346 0.013682 0.0011093 -0.015466 0.0022193 0.0062481 0.10935 0.031155 0.0028098 0.13391 0.027497 -0.0059522 -0.89597 -0.072731 0.24856 -0.69767 0.11213 0.10278 -0.89381 0.12587 -0.047526 -0.054727 0.038489 0.86037 -0.052531 0.001803 -1.0871 0.022444 0.24529 -0.97495 -0.063435 0.39645 -0.38967 -1.2929 -0.38441 -0.12375 -0.10039 0.00027728 -0.0078675 -0.28822 -0.0042929 -0.272 -0.029765 0.0061357 0.0043021 -0.47025 -0.056981 -0.55317 -0.48565 0.021407 -0.041974 0.47426 0.014609 0.86513 -0.027808 -0.005814 -0.0018014 0 0.59278 -0.22404 0.0088171 -0.04726 0.0066653 -0.0069195 -0.46135 0.027638 0.010564 -0.18295 -0.46121 0.87886 -0.14181 -1.2929 0.30873 0.016705 -0.1366 0.47301 0.073428 -0.075612 0.018383 -0.01037 -0.83914 -0.10145 0.038347 0.71143 -0.010784 -0.0061931 -0.0047079 0.45071 -0.0084385 -0.372 0 -0.16625 -0.028081 -0.32663 0.010146 -1.2929 0.010564 -0.98215 -0.92361 -0.54088 0.013926 -1.2929 -0.036265 0.27363 -0.010232 0.10964 0.00055459 0.029044 0.067232 0.61462 0.04812 0.0054139 0.01419 -0.005814 -0.012024 0.06308 0.43108 0.81239 -0.033677 0.038913 -0.013264 0.013074 -0.65024 -0.024798 -0.38705 -0.017529 0.0030522 0.0052749 0.15696 -0.62969 -0.18949 0.062223 0.68794 -0.058058 -0.47976 0.09667 0.15129 -0.018902 0.43581 -0.37256 0.018292 0.052383 0.0083351 -0.57024 -0.71817 -0.87883 -0.063166 0.017144 -0.12511 0.020203 0.00097064 0.0095883 -0.52818 -0.011611 -0.0013858 -0.0030475 -0.32472 0.037547 -0.0081624 -0.55206 -0.64992 -0.031721 0.039195 -0.16567 -1.0564 -0.011473 0.020203 -0.35064 0.013772 -0.059807 -0.52828 -0.921 0.0072217 -0.021235 0.20011 0.00027728 -0.51243 0.051814 -0.19236 0.0022078 -0.38627 0.037217 -0.044554 0.0026357 -1.0112 0.78871 -0.26612 0.030169 -1.2929 -0.88295 -0.048207 Deletion Peak 8 - CN values 5p15.31 chr5:1-29949316(probes 467509:484531) chr5:8447236-8465019(probes 472842:472860) chr5:7210628-13630197(probes 472006:476063) 0.011094 0.011554 Actual Copy Change Given 0.8251 0.0010493 -0.11312 0.0026357 0.056228 -0.13913 0.0087528 0.02511 -0.0091286 0.0015255 0.024268 3.1286 -0.018902 0.006109 0.024408 0.014051 0 -0.00013862 -0.089964 -0.16764 2.2708 -0.27296 -0.048613 0.50387 -0.10487 -0.00080148 0.54683 -0.50815 0.38998 0.1843 0.38891 -0.021373 -0.029584 0.0022193 0.22437 0.055155 0 0.012795 -0.60206 -0.013802 -0.38358 -0.0015243 0.0079175 -0.064374 2.09 -0.13812 0.50186 -0.029994 0.47423 0.0097276 -0.012851 3.6569 0.75013 -0.0056757 -0.046041 0.010006 0.56284 -1.1577 0.12035 0.79975 0.46998 -0.32097 0.058145 0.0060263 -0.0015696 0.72806 -0.0078863 -0.0044312 -0.0066432 1.4112 -0.172 0.19817 0.065656 -0.005814 -0.12135 0 -0.93585 1.012 0.083198 0.82905 0.023706 -0.95283 -0.00041585 0.036935 -0.78192 0.30857 1.032 1.3154 0 -0.42079 -0.15157 0 0.04883 -0.00069303 0.51385 0.00097064 0.059651 -0.0040162 0.020063 0.039478 -0.096176 0.022304 0.004142 0.77412 -0.14926 -0.0014515 1.1655 -0.020549 1.553 -0.32867 -0.014641 -0.66142 -1.067 3.0473 0.039873 -0.054151 -0.62874 0.0044411 -0.0027707 0.030591 -0.90305 -0.37493 0.0073609 0.34275 0.11726 0.0095883 0.07815 -0.88511 -0.88037 0.19832 0.041817 -0.0067914 1.0903 -0.77821 0 0.0062062 -0.35897 0.10526 0.3579 0 -0.0079504 -0.056846 0.10818 -0.01106 -0.13762 -0.11405 -0.022823 -0.021921 0.92128 0.012516 0.16235 0.021009 0.33254 0.058795 -0.50703 -0.010646 -0.0020784 -0.11561 -0.025209 -0.15528 -0.30475 -0.12095 -0.12252 0.08161 -0.0016629 -0.022808 0.49459 -0.012851 -0.036804 -0.02562 -0.43816 0.024055 -0.0056757 0.012376 0.023839 0.5633 0.26618 0.017733 -0.020549 0.0027745 -0.0013858 0.0052749 0.061079 0.042024 0.0023934 -0.040209 0.017264 -0.0053992 -0.32158 0 0.56045 -0.80352 -0.060883 0.4353 0.015727 -0.14575 0.099236 0.10687 0.00035565 0.88846 0.62133 -0.0083005 -0.019854 0.87847 0.23024 -0.021235 -0.32707 -0.19475 0.034046 -0.30381 -0.38251 -0.020747 0.048688 0.0043021 0.34163 0.024286 0.012516 0.14251 -0.04351 -0.15935 0.011958 1.3695 0.1676 0.0029133 0 0.0061342 1.2378 0.0049969 -0.020549 -0.017116 0.36559 0.28074 0.47753 0.18601 0.64066 0.0913 0.36583 -0.059538 0.00041593 -0.0094046 -0.52312 -0.96985 0.0016642 -0.47539 0.008892 -0.0011087 -0.025346 -0.020412 0.23117 0.040044 -0.067812 -0.0038779 -0.16737 0.33399 -0.54159 -0.016154 0.017824 0.21547 0 0.47993 0.59278 0.81869 -0.017941 0.35806 0.0023581 0.042307 -0.033269 0.0026357 -0.023703 0.096611 -0.012162 0.0052749 -0.57071 0.91669 0.018355 0.98142 0.013911 0.0034687 1.5774 -0.35065 -0.005261 0.38188 -0.0073376 0.021043 -0.62083 -0.0080244 -0.24216 -0.64029 -0.00069303 -0.0012473 -0.60587 0.11096 0.48199 -0.38342 -0.027261 -0.90715 -0.014228 0.0013868 -0.59263 -0.03395 1.1771 -0.0040162 -0.0037395 0.0020805 0.48682 -0.64923 -0.016863 -0.97623 -0.59663 0.10798 -0.33017 -0.21701 -0.21206 -0.012713 -0.74478 -0.83559 0.012564 -0.039529 0.0029133 0.52428 -0.62912 -0.88078 -0.052396 -0.28095 -0.14249 0.0054139 -0.85528 0.027076 1.2436 0.88526 0.0093098 0.021744 -0.019635 0.021966 -0.035366 0.004719 0.018299 1.2567 0.0013868 -0.18691 1.0293 0.35577 0.030591 0.059937 0.016705 0 -0.022881 -0.86876 -0.00027724 0.012934 0.63632 -0.0038779 -0.52174 -0.55527 0 0.0033021 -0.020138 -0.321 0.69346 -0.018765 0.6642 -0.36465 0.068952 0.47118 0.14846 0.011818 -0.0012473 Deletion Peak 9 - CN values 5q12.1 chr5:58151172-59818245(probes 498359:499393) chr5:58260298-59818245(probes 498437:499393) chr5:58902234-58905049(probes 498916:498917) 0.0004407 0.0042341 Actual Copy Change Given 0.8251 0.54128 -0.11312 0.0026357 0 0.4901 0.0087528 0.62588 -0.0091286 0.0015255 -0.50846 -0.11094 -0.018902 0.006109 0.024408 0.014051 0 -0.00013862 -0.089964 0.011679 0.0013868 -0.27822 -0.0019399 0.50387 -0.091822 -0.00080148 -0.61882 -0.50815 0.15621 -0.10254 0.40485 -0.02603 -0.41089 0.0022193 -0.72048 0.014724 0 0.0097809 -0.52522 0 0.319 -0.0042929 0.0079175 -0.064374 1.3715 -0.14224 -0.024114 -0.029994 -0.54724 0.0097276 -0.012851 0.71829 0.1601 -0.0056757 -0.028901 -0.75995 -0.21392 -0.26519 0.12035 -0.012851 0.46998 -0.073433 0.058145 0.014316 -0.0015696 -0.10998 -0.0078863 0.0034687 -0.0066432 0.5546 0.072109 0.19817 0.094346 -0.005814 -0.013677 0 0.0052749 -0.33272 0.085943 0.82905 -0.72101 0.079303 -0.30334 0.036935 -0.75916 0.33642 1.0265 -0.65361 0 -0.42495 -0.55005 0.013911 -0.4534 0 -0.0023553 0.00097064 -0.57011 -0.42735 0.020063 0.61824 0 -0.93931 0.004142 0.6977 -0.13871 -0.0014515 0.31391 -0.020549 0.019415 -0.3289 -0.014641 0.00597 0.011121 -0.021235 0.026209 0.01433 -0.31249 0.0044411 -0.0027707 0.044148 -0.89051 -0.35897 0.0019564 0.34275 0.11726 0.0069435 0.07815 0.0051359 -0.86594 0.19832 0.041817 -0.0067914 -0.61237 0.028481 0 0.0062062 -0.33133 -0.58048 -0.88366 0 -0.0079504 -0.056846 -0.49538 0 -0.23239 -0.08612 -0.01412 0.0023581 -0.038442 -0.68067 0.16445 0.074265 0.0047589 0.058795 -0.44472 0 -0.00093912 -0.11561 -0.70325 -0.16026 -0.30475 -0.12095 -0.10644 0.08161 -0.0016629 -0.01849 -0.58579 -0.010646 0.010635 -0.037762 -0.42593 -0.00076447 -0.0032963 0.012376 0.043007 0.086811 -0.026304 0.017733 -0.0024972 0.0027745 -0.0013858 0.0052749 0.061079 0.042024 0.0023934 -0.2 0.017264 -0.0053992 -0.32158 0 -0.19212 0.036294 -0.060883 0.44732 0.014749 0.073619 0.11404 -0.57891 0.013213 -0.54431 -0.22379 0.00027728 0.44868 -0.91702 0.22789 -0.021235 -0.32707 -0.19475 0.034046 0.25923 -0.38251 -0.074641 0.048688 -0.098335 0.43296 0.024286 0.012516 0.14251 0.019038 -0.15935 -0.015701 -0.48607 0.15487 0.0029133 0.020343 0.069669 0 -0.49871 0.010146 -0.00013862 -0.018078 0.28074 0 0.18601 0.001803 0.084717 0.34428 -0.051046 0.00041593 -0.0094046 -0.51469 -0.95558 0.0016642 0.053094 -0.45379 -0.0011087 0.084354 0.0091705 0.23117 0.040044 -0.067812 -0.0038779 -0.46396 -0.29839 -0.54159 -0.016154 0.046275 0.21547 0 0.47993 -0.042381 -0.0042574 -0.017941 -0.50541 0.0023581 0.036794 -0.033269 0.0026357 -0.023977 0.096611 0.041034 0.049966 0.52171 0.92966 0.018355 0.012934 0.013911 0.028903 -0.20249 2.2046 -0.005261 -0.33964 -0.0020784 0.021043 -0.62083 -0.0080244 -0.24216 -0.64029 0.00597 -0.0012473 -0.10381 0.082765 0.48199 -0.18352 -0.027261 -0.8932 -0.014228 0.0013868 1.1379 -0.0040162 0.31856 -0.0040162 -0.0037395 0.0020805 0.1022 -0.64424 -0.016863 -0.94379 0 0.10798 -0.47617 -0.21701 -0.88804 -0.012713 -0.01354 -0.83292 0.012564 -0.039529 0.0029133 0.52428 -0.62912 0.011539 -0.052396 -0.28095 -0.14249 -0.97167 -0.3769 0.027076 -0.51753 -0.0042929 0.0093098 0.021744 -0.019635 0.027685 0 -0.42963 0.018299 0.0072502 -0.011887 -0.31242 -0.4549 0.0013868 0.030591 0.059937 0.013213 0 -0.00055444 0.039195 -0.00027724 0.012934 0.63632 -0.0038779 -0.52174 -1.1605 0 0.0033021 -0.0073339 -0.321 -0.058868 -0.007472 -0.47997 -0.36465 0.068952 0.47118 0.10424 0.010285 -0.0012473 Deletion Peak 10 - CN values 5q31.3 chr5:135732466-166712758(probes 540478:559528) chr5:141000063-141022847(probes 542981:542987) chr5:113101675-180915260(probes 527247:567533) 2.2081e-08 1.2881e-07 Actual Copy Change Given 0.8251 0.54111 -0.10697 -0.24883 0 -0.11105 0.0087528 0.023847 -0.0091286 0.0015255 -0.50846 -0.57835 -0.018902 0.006109 0.0026357 0.014051 0 -0.00013862 -0.089964 0.0027613 -0.014228 -0.28025 -0.0019399 0.58865 -0.74351 0.010564 -0.61882 -0.51109 0.15621 -0.10254 0.40485 -0.02603 -0.4189 0.0022193 -0.72734 0.013977 0 -0.0089906 -0.13316 -0.0040869 -0.35852 -0.018078 -0.043195 -0.064374 0.57985 -0.14224 -0.024114 -0.029994 -0.54724 0.0097276 -0.012851 0.71829 -0.64481 -0.0056757 -0.028901 -0.75995 -0.20796 -0.26519 0.12035 -0.012851 -0.036677 -0.073433 0.058145 0.0077641 -0.0015696 -0.18836 -0.45254 -0.0075316 -0.0066432 -0.28762 -0.43116 0.19817 0.095072 -0.0056757 0.0037465 0 0.0052749 -0.33272 0.085943 1.0474 -0.73188 -0.87961 -0.72376 0.036935 -0.75916 -0.3224 2.4493 -0.64773 0 -0.42495 -0.54431 -0.48701 -0.47309 0 -0.0023553 0.010564 -0.57011 -0.42887 -0.63109 0 -0.0026322 0.013074 0.004142 -0.059583 -0.16434 -0.0014515 -0.33969 -0.0095426 0.021818 -0.3289 0.52066 -0.00024181 0.013213 -0.93858 0.026209 -0.59546 -0.39051 -0.0024764 -0.0027707 0.044148 -0.89051 -0.35897 -0.95101 -0.34469 -0.029311 0.0069435 0.07815 -0.0034627 -0.86594 0.19832 0.021258 0.00096137 -0.61237 -0.7962 0 0.0062062 -0.46012 0.092486 -0.90411 -0.37909 -0.0079504 -0.076516 -0.49545 0 -0.23239 -0.097405 -0.013206 -0.64893 -0.038442 -0.68067 0.16445 -0.67967 -0.35795 0.058031 -0.85809 0.0051667 0.0052749 -0.11561 -0.31143 -0.16026 -0.30475 -0.12095 -0.10644 -0.66448 -0.0016629 -0.01849 -0.58579 -0.010646 -0.011816 -0.035338 -0.42593 -0.00076447 -0.40207 -0.0066432 0.030443 -0.54542 -0.38067 0.017733 0.00069327 0.0013868 -0.0013858 0.0052749 -0.2474 0.062794 0.0089274 -0.2 0.017264 -0.0011087 -0.32158 0 -0.19212 -0.78851 -0.16357 0.41178 0.014749 0.073619 0.11404 -0.57891 0.022164 -0.54431 -0.22379 0.00027728 -0.076861 -0.91702 0.22789 -0.0034627 -0.32333 -0.25991 -0.91578 0.29867 -0.37746 -0.074641 0.058367 -0.098335 -0.71772 0.010982 -0.54165 0.14251 0.019738 -0.15935 -0.040019 -0.49414 0.15487 0.0029133 -0.028765 0.11517 -0.01639 -0.50038 0.010146 -0.00013862 -0.018078 0.035965 0 0.18601 -0.63036 0.084717 0.34428 -0.063032 0.00041593 0.00069327 -0.51469 -0.95558 0.0016642 0.053094 -0.46579 -0.0011087 0.43479 0.0091705 0.23287 0.040044 -0.067812 -0.0038779 -0.45756 -0.29839 -0.54159 -0.016154 0.0375 0.23442 0 0.46639 0.59458 -0.0031504 0.017544 -0.51733 0.0023581 0.036794 -0.033269 0.0026357 -0.023977 0.096611 -0.45404 -0.66085 -0.061152 -0.0028649 -0.89135 -0.0066432 0.013911 0.039619 1.4534 -0.33006 -0.005261 -0.33964 -0.0020784 0.021043 -0.62083 -0.0080244 -0.24216 -0.00709 0.0045499 -0.97003 -0.094064 0.070099 -0.60245 -0.18352 0.032563 -0.8932 -0.0095426 -0.028306 -0.016429 -0.0040162 0.31856 -0.0040162 -0.0037395 -0.0093491 0.1022 -0.64236 -0.016863 -0.94863 0 0.11345 -0.47617 -0.21701 -0.90055 -0.012713 -0.01354 -0.83187 0.0019903 -0.85654 0.0029133 0.5473 -0.7139 0.021603 -0.052396 -0.28095 -0.13135 0.0063871 -0.38121 0.027076 0.16986 -0.0042929 0.017124 0.021744 -0.019635 0.027685 0 -0.43857 -0.6881 0.030761 -0.011887 -0.31242 0.065513 -0.011409 0.042166 0.059937 0.0091705 0.021744 -0.005261 -0.87642 -0.00027724 0.012934 0.57519 -0.0038779 -0.51815 -1.1542 0 -0.015081 -0.0073339 -0.321 -0.058868 -0.007472 -0.48029 -0.36465 -0.056442 0.47118 0.09304 0.010285 -0.0033243 Deletion Peak 11 - CN values 6q21 chr6:67919847-171115067(probes 604241:663522) chr6:111977474-112203034(probes 628887:629047) chr6:97283784-171115067(probes 620282:663522) 1.5442e-06 0.13042 Actual Copy Change Given -0.9303 -0.58955 -0.067592 -0.038936 -0.61431 -0.082029 -0.51352 -0.61978 0.0033299 0.36142 0.027638 -0.5615 -0.013815 -0.0088526 -0.6332 -0.40385 -0.0026322 -0.016841 -0.091949 -0.20199 -0.34412 -0.20187 -0.54391 -0.46961 0.0081165 -0.11561 0.027076 -0.51805 -0.62912 -0.43521 -0.43967 0.02806 -0.39379 -0.42364 -0.73064 -0.0057491 0.035524 -0.053611 0.27695 -0.49266 0.0097276 -0.92745 0.0083351 -0.15707 -0.36398 -0.12439 -0.8177 -0.10304 0.059508 0 -0.55387 -0.03095 -0.67545 0.027778 -0.85963 -0.76766 -0.22687 0.23465 -0.11887 -0.01354 -0.046589 -0.0031415 -0.24326 -0.24729 0.0021739 -0.69199 -0.006505 -0.013127 -0.9186 -0.16841 -0.43062 -0.041702 -0.63434 -0.0063668 0.013353 0.041741 0 -0.33491 -0.99642 -0.57862 -0.72517 -0.81671 0.0029133 -0.57773 0.056798 -0.00041585 -0.48901 -0.50577 -0.89754 -0.43832 0.041317 -0.73162 0.0075804 -0.53195 0 -0.48613 0 -0.42691 -0.63556 -0.63396 -0.0099565 -0.78889 0.0042809 -0.10536 -0.43637 -0.0021441 -0.72004 -0.85138 -0.85143 -0.76338 -0.56694 -0.63623 0.020343 -0.03749 -0.1296 -0.022606 -0.19247 -0.41608 0.0022193 -0.16841 0.019153 -0.3983 -0.024631 -0.33814 -0.42527 -0.59585 -0.33121 -0.87307 -0.86672 -0.66423 0.0034767 -0.021245 -0.60821 -0.79026 -0.95129 -0.9161 -0.50069 -0.82879 0.0084743 -0.19563 -0.89834 -0.64424 -0.51548 -0.031768 0.07186 -0.76962 -0.40955 -0.65398 -0.30357 -0.67747 -0.58921 -0.61114 -0.36986 -0.34021 -0.82472 -0.48764 -0.54098 -0.58432 0.016425 -0.39608 -0.29497 0.034739 0.0048579 -0.012438 0 -0.24861 -0.0077482 -0.15477 -0.54678 -0.50142 0.01989 0.010074 0.31065 -0.55146 -0.2207 -0.29355 -0.36113 0.0061584 -0.11813 -0.0048461 -0.092213 -0.83446 0.025353 -0.40385 0.56081 0.019223 -1.0977 0 0.070171 0.14384 -0.62064 0.011488 0 -0.55917 -0.9 -0.13124 0.01447 -0.57989 -0.78159 -0.84979 0.090865 -0.78454 -0.52081 0.016845 -0.61316 -0.34312 0.1136 -0.25031 0.11925 -0.3386 -0.78331 0.011346 -0.085052 -0.18395 -0.21055 0.010982 -0.53673 0.3235 0.0056471 -0.25791 0.041883 -0.48743 0.22407 0.54171 -0.47078 -0.89153 -0.023292 -1.0095 -0.87494 -0.0048461 0.45973 -0.36635 -0.51074 -0.13355 -0.63793 0.38403 -0.48339 0.089851 0.024548 0.49978 0.030687 -0.95753 -0.87157 -0.2 0.012097 -0.0027707 -0.5796 -0.74751 -0.59565 -0.77922 -0.12416 -0.040209 -0.089145 0.0020805 -0.53032 -0.011198 -0.83454 -0.052531 -0.021235 -0.3341 -0.83502 -0.0037587 -0.84811 -0.50277 -0.00013862 -0.65454 -0.041241 0.081535 -0.043602 -0.7384 -0.46557 -0.63818 -0.0081624 -0.9622 -0.90745 -1.0126 -0.64019 -0.86389 -0.048342 -0.60651 -0.020961 -0.68988 -0.83017 -0.3856 -0.36906 -0.64335 -0.56892 -0.075612 -0.99206 0.0017269 -0.5724 -0.75849 -0.6333 -0.16721 -0.0029455 -0.89297 -0.0050274 0 -0.57743 -0.53541 -0.48046 0 -0.08413 -0.0056757 -0.23459 0.023706 0.27395 0.015587 -0.58215 0 0.24507 -0.62693 -1.0236 -0.43727 -0.04983 -0.83446 -0.75596 -0.85844 -0.52174 -1.1849 0.13214 -0.87502 0.15831 -0.57307 -0.03749 -0.9676 -0.35578 -0.44846 -0.2175 -0.023566 -0.48963 -0.0083338 0.058823 -0.60464 -0.0019073 0.045991 0.014246 -0.81325 0.74019 -0.74268 0.79162 -0.010232 -0.91515 -0.827 -0.024935 -0.0087146 -0.54482 -0.86523 0 -0.0012473 -0.6355 -0.0012473 0.41781 0.047552 0.008892 -0.0047267 -0.39875 -0.15975 0.75432 -0.0030475 0.01082 -0.36839 -0.23386 -0.9451 0.039439 -0.87534 -0.45308 Deletion Peak 12 - CN values 6q26 chr6:161693099-163153207(probes 659128:659773) chr6:161767520-163153207(probes 659169:659773) chr6:97283784-171115067(probes 620282:663522) 1.8085e-12 3.1221e-10 Actual Copy Change Given -0.9303 -0.59651 -0.067592 -0.038936 -0.62703 -0.082029 -0.51352 -0.61978 -0.00041585 0.39612 0.025671 -0.57282 -0.013815 -0.0088526 -0.62998 -0.40385 -0.0026322 -0.016841 -0.091949 -0.20199 -0.33641 -0.20187 -0.015879 -0.46961 0.0081165 -0.11561 0.027076 -0.51805 -0.62912 -0.43521 -0.43967 0.02806 -0.39379 -0.42364 -0.76105 -0.0057491 0.035524 -0.053611 0.28153 -0.49898 -0.3933 -0.92547 0.0083351 -0.16637 -0.3401 -0.12439 -0.87463 -0.11548 0.043429 0 -0.54925 -0.85987 -0.67545 -0.012438 -0.87057 -0.76766 -0.22811 0.30473 -0.62236 0.025531 -0.55005 -0.0031415 -0.24326 -0.24922 0.0021739 -0.68182 -0.006505 0.84494 -0.94058 -0.16841 -0.42887 -0.041702 -0.63434 -0.0063668 -0.80225 0.041741 0.026092 -0.33491 -0.99642 -0.57862 -0.736 0.23457 0.0029133 -0.57773 0.056798 -0.0049844 -0.48901 -0.52567 -0.91938 -0.43537 0.036794 -0.74438 0.018383 -0.53195 0 -0.48613 0.0076392 -0.42691 -0.63556 -0.63396 -0.0099565 -0.81529 0.0042809 -0.10536 -0.47194 0.0043751 -0.72004 -0.85138 -0.87937 -0.76338 -0.56694 -0.0036011 0.020343 0.86076 -0.1296 -0.029857 -0.19247 -0.41608 0.0040243 -0.056846 0.019153 -0.3983 0 -0.33814 -0.42156 -0.59585 -0.33121 -0.8897 -0.87984 -0.66423 0.047912 0.032272 -0.67625 -0.78201 -1.0024 -0.93592 -0.50069 -0.8361 -0.017803 -0.57546 -0.89834 -0.69423 -0.51548 -0.031768 0.076056 -1.0676 -0.40955 -0.65398 -0.30357 -0.68095 -0.58921 -0.61114 -0.0013858 -0.37988 -0.82472 -0.48764 -0.54098 -0.58432 0.016425 -0.39608 -0.29497 -0.012162 0.0048579 -0.0089906 -0.0019743 -0.24861 -0.0077482 -0.15637 -0.54678 -0.50142 0.01989 -0.89203 0.31594 -0.55146 -0.26505 -0.31832 -0.36113 0.0019911 -0.12447 0.017544 -0.092213 -0.83446 0.038206 -0.40385 0.57474 0.019223 -1.1373 -0.0034627 0.070171 0.14384 -0.62064 0.0024969 0 -0.55917 -0.9 -0.12375 0.01447 -0.58078 -0.78159 -0.89239 0.10555 -0.79135 -0.52081 0.016845 -0.61316 -0.33006 0.1136 -0.25031 0.11925 -0.3386 -0.78331 0.011346 -0.089434 -0.18395 -0.21055 0.014609 -0.54138 -0.11743 0.0231 -0.2567 0.041883 -0.48743 0.22407 -0.60487 -0.48334 -0.89153 -0.50322 -0.49663 -0.87494 -0.011473 -0.039937 -0.37375 -0.51074 -0.13355 -0.63557 -0.30275 -0.48339 -0.31541 0.024548 0.48751 -0.52556 -0.95753 -0.91021 -0.2 0.012097 -0.0027707 -0.02562 -0.76962 -0.61508 -0.78774 -0.12416 -0.040209 -0.089145 0.0020805 -0.54088 -0.011198 -0.83454 -0.052531 -0.021235 -0.3341 -0.88194 -0.0037587 -0.84554 -0.54673 -0.00013862 -0.67909 -0.032996 0.081535 -0.043602 -0.74795 -0.47258 -0.65175 -0.61074 0.011584 -0.90745 -1.0325 -0.64019 -0.85702 -0.063632 -0.60651 -0.023537 -0.69956 -0.8393 -0.37381 -0.37471 -0.64584 -0.57607 -0.66439 -0.99206 0.0068044 -0.5724 0.09043 -0.6333 -0.16721 0.013632 -0.89297 0.0027745 -0.0060904 -0.58794 -0.53541 -0.46139 0 -0.08413 -0.0056757 -0.23459 0.023706 0.14575 0.060651 -0.58215 0 0.21606 -0.62693 -1.0236 -0.44975 -0.040888 -0.83987 -0.75892 -0.85844 -0.53781 -0.56438 0.13214 -0.8751 -0.28608 -0.27892 -0.03749 -0.99366 -0.33871 -0.44846 -0.26372 -0.023566 -0.48963 -0.013677 0.099579 -0.60464 0.015168 0.045991 0.027694 -0.83509 0.7683 -0.7557 0.78987 -0.010232 -0.91515 -0.827 -0.11299 -0.0087146 -0.55106 -0.86523 0 -0.0027707 -0.6355 -0.0012473 0.4402 0.047552 0.008892 -0.00058217 -0.39875 -0.16942 0.73162 -0.0030475 -0.50805 -0.36839 -0.23386 -0.47424 0.010771 0.015447 -0.45308 Deletion Peak 13 - CN values 8p23.3 chr8:1-2793575(probes 744508:745276) chr8:1-617884(probes 744508:744508) chr8:1-2711041(probes 744508:745248) 0.02264 0.022966 Actual Copy Change Given 0.82941 -0.58612 0.26687 0.040892 -0.60419 -0.034657 0.00041593 0 0.26435 0.094355 0.016705 -0.11956 -0.0095426 0.022725 -0.62988 -0.0099565 0.057226 -0.00055444 -0.5719 -0.0046422 0.24716 -0.28168 -0.53022 0.39065 -0.77089 -0.046451 0.0070826 -0.22194 0.089996 -0.19654 1.083 0.069669 0.29754 -0.010587 -0.76124 -0.8096 -0.0049844 -0.053476 0.36231 0.37102 0.079015 -0.012576 -0.85393 0.24676 0.76446 0.61745 0.75586 0.019643 0.35561 0.0026357 -0.0062286 0.0029133 -0.63282 -0.035176 0.0037465 0.01447 -0.35508 0.0095205 0.26812 -0.80443 0.48199 0.0060146 -0.36283 -0.55107 0.0020352 0.25423 0.0015255 0 -0.010094 -0.20037 0.010285 0.26545 0.57237 -0.0034627 0.75968 0.038706 -0.94912 -0.36533 0.07183 -0.34847 0.0012481 0.076279 -0.0041546 0.024689 0.016204 -0.039665 0.11791 0.48889 0.70828 0.032422 0.13554 -0.0071958 -0.007472 0.47478 0.49528 0.45615 0.027919 -0.0087146 0.026373 -0.29114 0.031049 0 0.0049757 -0.89746 0.55663 0.0053479 -1.2921 1.4169 0.01215 -0.80202 1.181 0.58739 0.74024 0.58166 -0.037762 1.0088 0.067232 0.019223 0 -0.18433 0.0095883 0.34648 0.020203 0.32479 0.35855 0.00597 -0.35898 -0.00013862 0.019923 0.19078 -1.2929 0.0054046 -0.035534 0.044715 0.44342 -0.00041585 -0.5517 0.23179 -0.02562 0.19086 -1.2929 -0.80393 -0.1499 0.050819 0.075049 0.039195 0.90964 -0.073076 0.0051359 -0.70899 -0.098417 0.040044 -0.0069195 -0.033365 -0.11952 -0.36386 -0.009937 -0.012851 0.018383 0.10672 0.1625 0.083776 -0.70118 0.032972 -0.0022168 0.26797 0.46015 0.70288 0.49588 0.12344 0.017824 -0.88353 -0.00041585 0.0069435 -0.097503 0.54202 0.27132 0.27621 -0.0032919 0.0016642 -0.0029091 -0.83905 -0.24204 -0.10381 -0.111 0 0.026795 0.0037465 -0.38739 -0.66873 -0.14048 0.012655 0.11477 -1.0652 0.016286 -0.13529 0.095072 -0.57979 -0.82318 0.066802 0.25496 -0.0020784 -0.2228 0.037641 -0.61873 -0.0008316 0.28514 1.0767 -0.023768 0.33254 -0.042168 -0.0086372 0.043865 0.004719 -0.10261 -0.0047079 -0.00055444 -0.2497 -0.11975 -0.26526 -0.0018014 -0.024661 -0.66849 -0.0034627 -1.0026 0.0080567 0.39287 0.49718 -0.91785 0.0084743 0.39944 0.38469 -0.016462 -0.090229 -0.065259 -0.31471 -0.58809 0.07815 0.0044411 0.66096 -0.54822 1.7785 -0.95937 0.026514 0.0069435 0.0072615 1.5965 -0.0088526 -0.21763 -0.78639 0.19883 0.0080567 0.010171 0.17031 0 0.68459 0.58381 0.10118 0.18662 -0.23067 0.18847 -0.064742 0.0013868 0.38932 -0.72517 -0.72879 -0.025072 0.19026 0.55354 -0.32252 0 -0.77737 0.46878 -0.00092595 0.02014 0 -0.019314 -0.9171 0.72282 0.29111 0.0038854 0.10745 0.79491 0.065226 -0.64161 -0.0018014 0.0054139 0.60878 0 0.019363 0.92817 0.065513 -0.038067 0.019565 -0.0063591 0.013632 -0.0019399 -0.79536 0.69409 -0.11443 0.044475 0.11617 -0.0018014 0.42565 -0.053746 0.032422 -0.0094046 0.032281 -0.5852 -0.23838 0.10716 1.3718 0 0.39761 0.30282 0.32689 -0.0022997 0.0034687 -0.00041585 -0.0019803 0.042307 -0.0033243 0.13924 -0.00372 0.50811 0.022865 -0.85297 -0.36306 -0.68642 0.0065262 0.48854 0.67938 0.10439 -0.62051 0.69855 0.97069 0.0028303 0.033296 -0.0073339 -0.70554 -0.45993 -0.0055375 1.2716 -0.31891 -0.032587 0.041034 -0.53404 0.039619 -0.013815 0.038065 0.60535 0.4559 0.7134 -0.54911 0.055373 -0.59138 -0.42189 -0.06424 0.74537 -0.01037 -0.54709 0 0.16685 -1.0015 0.021744 -0.42767 0.27726 Deletion Peak 14 - CN values 9p23 chr9:7887952-12687261(probes 829902:831871) chr9:8310705-10619051(probes 830138:831467) chr9:1-31411798(probes 825626:844294) 4.5679e-14 0.056633 Actual Copy Change Given 0.013074 0.015247 0.012735 -0.24399 -1.2529 -0.026193 -0.51135 -0.61412 -0.4136 0.012097 -0.51794 0.35915 0.78582 0.006109 -0.63216 -0.3993 0.012795 -0.042323 0.34226 -0.19925 0.30521 -0.012024 -0.026304 -0.4603 0.0034687 0.00597 -0.6171 -0.51399 -0.34882 0.049277 -0.43967 -0.0081624 -0.40926 -0.42068 -0.73819 -0.76847 -0.038442 -0.046583 -0.97892 -0.061273 -0.36567 -0.90787 -0.83599 -0.16561 -0.19693 -0.14597 -0.827 -0.081562 -0.057385 -0.011887 -0.54502 -0.0099565 -0.60941 0.00597 -0.10342 -0.79068 0.18586 -0.85742 -0.2491 -0.808 -0.53412 -0.33522 -0.35624 -0.082416 0.021558 -0.17375 -0.0038779 0.0049969 -0.92369 0.24544 -0.41476 -0.34631 -0.63906 -0.0045695 0.0016642 -0.49435 -0.8892 0.011958 -0.62941 -0.010784 -0.73354 0.068091 -0.30404 -0.5792 -0.75046 -0.31669 -0.12659 -0.064374 -0.89335 -0.41003 -0.55537 -0.73652 0 -0.46059 -0.51342 -0.46607 -0.58696 0.017124 -0.619 -0.62617 -0.093799 -0.80534 -0.0012684 -0.8508 0.13598 0.0052089 -1.0923 -0.00835 -0.85921 -0.75874 -0.017666 -0.63233 -0.31634 -0.027261 -0.21342 0.52415 -0.79463 -0.40948 -0.0018014 -0.075078 -0.89519 -0.36862 0.01637 -0.33791 -0.42359 -0.59009 0.002003 0.58309 -0.86696 -0.2497 -0.4442 -0.6716 -0.61168 -0.78412 1.7947 0.00069327 -0.50836 -0.82611 -0.87705 -0.21231 0.030591 -1.2929 0.040751 -0.33733 -0.44927 -0.77116 0.015087 -0.65314 -0.30498 -0.68424 -0.3304 -0.66263 -0.36578 -0.036401 0.025531 -0.53946 -0.54108 -1.2358 -0.67994 -0.38817 -0.12668 -0.16891 -0.3856 0.011958 0.0094491 -0.24423 -0.60864 -0.92051 -0.54002 -0.47501 -0.92503 -0.86309 -0.0020784 -0.56734 -0.29391 -0.56741 -0.032041 -0.22067 0.00041593 -1.2037 0.0034687 -0.83236 -0.083864 -0.36658 -0.59932 -0.091684 -0.52481 -0.68214 -0.13445 -0.7265 -0.20461 -0.012162 -0.16967 -1.0928 -0.0096806 0.14556 -0.19962 -0.56416 0.014888 -0.92668 -0.20871 -0.78426 -0.51052 -0.89657 -0.60245 0.016565 0.027778 -0.81967 -0.91028 -1.2929 -0.38408 -0.058386 -0.057789 -0.14644 -0.69648 -0.60651 -0.54532 -0.37053 0.018198 -0.25574 -0.041567 -0.49913 -0.66476 -0.57427 -0.48308 -0.87494 0.45118 -0.48932 -0.0073339 -0.7265 -0.50588 -0.73099 -0.50432 -0.13316 -0.6385 -0.28263 -0.52302 -0.29497 -0.038034 0.40194 -0.51808 -0.94496 0.84731 -0.458 -0.46185 -0.94437 0.37199 -0.3409 -0.32971 -0.77252 -0.12987 -0.50494 -0.45005 -0.31762 -0.53875 -0.39997 -0.8296 -0.0027707 -0.0077482 -0.44555 0.021744 -0.20159 -0.85213 -0.52877 -0.72217 0.1374 -0.82023 -0.0063668 -0.60564 -0.31487 -0.43702 -0.63897 -0.5976 0.010887 -1.2929 0.015168 -0.30839 1.4312 0.80675 -0.58373 -0.007472 -0.69839 -0.83293 -0.38996 -0.61997 -0.00013862 -0.34021 -0.63169 0.0081959 -0.97231 -1.1369 -0.73722 -0.5899 0.43268 -0.90798 -1.2929 -0.60071 -0.0048461 0.52538 -0.29851 -0.79967 -0.57101 -0.0026322 -0.0016629 -0.23423 -0.50245 -0.22145 0.77291 -0.55246 -0.041024 -0.091287 0.047326 -1.0307 -0.39018 -0.58657 -0.82812 -0.7532 -0.62513 -0.0059522 -0.79154 -0.73069 -0.87237 -0.28251 -0.28059 -0.35065 0.016985 -0.84603 -0.45436 -0.067458 -0.018604 -0.48963 -0.69369 -0.71968 -0.18794 -0.00027724 -0.50722 -0.68493 -0.72604 -0.01119 -0.74442 -0.422 0.00041593 -0.34553 -0.80418 0.0093098 -0.82432 -0.55266 -0.85615 -0.52194 -0.78992 -1.2929 0.00013863 -0.51249 -0.53855 -0.26841 -0.088863 -0.39864 -0.33526 -0.056041 -0.00039182 -1.0308 -0.36159 -0.21293 0.016006 -0.75253 -0.88944 -0.44351 Deletion Peak 15 - CN values 9p21.3 chr9:21959052-22003135(probes 839037:839054) chr9:21959052-21997722(probes 839037:839050) chr9:1-31411798(probes 825626:844294) 8.2901e-218 1.2353e-212 Actual Copy Change Given -0.83962 0.015247 0.012735 -0.50038 -1.2302 -0.026193 -0.51135 -1.2929 -0.39708 0.012097 -1.0491 0.35915 0.78582 0.006109 -0.63216 -0.3993 0.012795 -0.042323 0.34226 -0.19925 -0.28976 -0.012024 -0.026304 -0.4603 0.0034687 0.00597 -0.6171 -1.0886 -0.78032 0.049277 -0.43469 -0.0081624 -0.40882 -1.183 -0.73819 -1.2929 -0.038442 -0.046583 -1.0454 -1.2929 -0.36567 -0.89687 -1.2929 -0.16561 -0.19693 -0.14757 -0.827 -0.081562 -0.057385 -0.011887 -0.54502 -0.0099565 -1.2929 -1.2929 -0.10342 -0.79068 0.18586 -0.85742 -0.69033 -0.808 -0.53412 -0.33522 0.0013868 -0.70488 -1.2116 -0.15928 -0.0038779 0.0049969 -1.2929 0.20827 -0.41476 -0.32275 -0.6401 -0.0045695 -1.2929 -0.53266 -1.2929 -0.35521 -0.62941 -0.010784 -1.2929 -0.8772 -0.30404 -0.5792 -0.75547 -0.3224 -0.092253 -0.064374 -0.89335 -0.41003 -0.8855 -1.2929 0 -0.46059 -1.2929 -0.46547 -1.1401 -1.2929 -0.619 -0.61428 -0.093799 -0.80534 -0.0012684 -1.2929 -0.4826 0.0052089 -1.0591 -0.00835 -1.2929 -0.75874 -0.017666 -0.63233 -0.31634 -1.2929 -0.48176 0.52415 -0.79327 -0.40948 -0.0018014 -0.075078 -1.2929 -1.156 0.01637 -0.33791 -0.8031 -0.58823 0.002003 0.5856 -0.86696 -0.2497 -0.4442 -1.2929 -1.2929 -0.78412 -1.2929 0.00069327 -0.50836 -1.2929 -0.87705 -0.21231 -1.2929 -1.2929 0.040751 -0.33733 -0.44701 -1.2929 -1.2929 -0.65314 -0.96953 -0.68424 -1.2929 -0.66263 -0.36578 -0.036401 0.025531 -1.2929 -0.54108 -0.58048 -0.68177 -0.38817 -0.12668 -0.45072 -0.3856 0.011958 0.0094491 -0.24423 -0.60864 -0.87072 -1.2929 -0.45436 -1.2929 -1.2929 -0.0020784 -0.55577 -0.59088 -0.52696 -0.037898 -0.22067 -0.0049844 -0.56027 0.0034687 -1.2929 -0.083864 -0.73626 -1.218 -0.091684 -1.2929 -1.2929 -0.13445 -0.71444 -0.1876 -0.012162 -0.16967 -1.0928 -0.0096806 -0.001315 -0.19962 -1.2659 -0.76826 -0.90889 -0.20871 -0.78426 -0.51052 -1.2929 -0.60245 -1.2929 0.027778 -0.8126 -0.91028 -0.9357 -0.38408 -0.058386 -0.46472 -0.14644 -0.69648 -1.2929 -1.0988 -0.37053 0.018198 -0.25574 -0.042245 -1.2929 -0.66476 -0.54865 -0.4643 -1.2929 -1.2929 -0.48932 -0.8679 -1.04 -0.9671 -0.7019 -0.50432 -0.13316 -1.24 -0.27368 -0.98882 -0.66919 -0.038034 -1.2929 -1.2929 -1.2929 0.84731 -0.458 -0.92271 -0.94437 0.36444 -0.3409 -0.33374 -1.2929 -0.12987 -1.2929 -0.44392 -0.78959 -0.54905 -0.39997 -1.2929 -0.39597 -0.0077482 -0.44555 0.021744 -0.032415 -0.83397 -1.2929 -0.72217 -1.2929 -1.2929 -0.0063668 -1.2086 -1.2929 -0.92294 -1.2929 -1.2929 -0.95498 -1.2929 -1.0045 -1.2701 -1.2929 -0.017666 -1.068 -0.007472 -0.69839 -1.2929 -1.2929 -0.61133 -0.00013862 -0.34021 -1.2929 0.0081959 -1.2929 -1.0965 -1.2929 -0.5899 -0.56749 -0.90798 -0.88093 -0.60071 -0.0048461 -1.2929 -0.29851 -0.79967 -0.57101 -0.0026322 -0.0016629 -0.62751 -0.50245 -0.22145 0.77291 -0.55246 -0.39986 -0.091287 0.047326 -1.0073 -0.39018 -0.57259 -1.2929 -0.7532 -1.0372 -0.0059522 -0.79154 -0.73069 -0.87237 -0.2726 -1.0593 -0.77277 -1.2929 -0.84603 -0.45436 -1.2929 -0.018604 -0.48963 -0.69369 -0.71968 -0.18794 -0.00027724 -0.50722 -0.68493 -0.12587 -0.01119 -0.74442 -0.422 0.00041593 -0.35008 -1.2929 0.0093098 -1.2929 -1.2929 -1.2929 -0.96803 -1.2929 -1.2929 -0.82855 -1.2929 -0.47596 -0.52522 -0.023621 -0.39864 -0.342 -0.056041 0.0012481 -1.2929 -0.36159 -0.21293 0.016006 -0.75253 -1.2929 -0.44351 Deletion Peak 16 - CN values 10p15.3 chr10:1-688423(probes 893290:893358) chr10:474043-484158(probes 893335:893336) chr10:1-861823(probes 893290:893438) 2.7625e-05 2.8015e-05 Actual Copy Change Given -0.0041546 -0.57431 -0.41893 -0.13406 -0.63765 -0.014805 -0.50701 -1.2929 -0.42702 -0.37053 -0.51846 0.38728 -0.019726 0 -0.69595 -0.0063668 -0.0036011 -0.0066432 -0.13303 -0.070135 -0.34985 -0.28061 -0.02603 0.00097064 -0.75636 -0.098023 -0.62589 0.088982 -0.11548 -0.18611 -0.45003 -0.018067 -0.40915 -0.43387 0.19893 -0.82578 0.0051359 -0.0045695 0 -0.4828 -0.38739 -0.0087146 -0.84363 0.22545 -0.42629 -0.16907 -0.018765 -0.12095 -0.19911 -0.020138 -0.53977 -0.833 0.1348 -0.020001 -0.88181 0.0055529 -0.26408 -0.81905 -0.39308 0.073402 -0.55157 0.011166 -0.45576 -0.25153 -0.0069088 -1.0204 -0.44059 0.88106 0.004719 0.1655 0.013213 -0.51465 -0.64255 -0.0023553 -0.83317 -0.45651 -0.012713 -0.016979 0.031295 0.00458 -0.033132 -0.46834 -0.0055375 -0.58853 -0.78257 -0.32484 -0.99613 0.46707 -0.90023 0.0043021 -0.54865 -0.51249 -0.0085766 -0.47965 -0.49923 -0.4756 -0.56684 -0.458 -0.96581 -0.65333 -0.03286 -0.00055444 -0.002238 -0.031247 -0.16828 0.005765 -0.77269 -0.84227 0 -0.19249 -0.031496 -0.0051227 -0.28632 -0.011198 -0.084793 -0.55558 0.064368 0.020903 -0.0031859 0 -0.014076 -0.074811 -0.94497 -0.33952 -0.22613 -0.0019399 -0.014346 -0.37437 -0.83405 -0.69033 0.032075 0.0034595 -0.65534 -0.8026 -0.058324 -0.0018014 0.059794 0.57576 -0.046718 -0.17259 -0.86806 -0.70717 -0.49708 -0.11317 -0.44992 -0.10552 -0.046947 -0.70657 -0.30787 0 -0.33445 -0.66679 -0.012216 -0.047899 -0.15835 -0.61508 0.0056919 -0.60285 0.034536 0.0020805 -0.3866 -0.18635 -0.38487 -0.72888 -0.0067813 -0.00069303 -0.63263 -0.91957 -0.55942 -0.48735 -0.24934 -0.91436 0.00041593 -0.086253 0.07843 -0.5877 -0.44207 -0.18743 0.0024969 -0.0042929 -0.025072 -0.0012473 -0.23887 -0.36884 -0.65181 -0.042652 -0.65625 0.0034687 -0.92748 0.0058309 0.0011093 -0.0059522 -0.024388 -1.1437 -0.041024 -0.20068 -0.14091 -0.1025 -0.015188 -0.92174 -0.40272 0.0090312 0 -0.91123 -0.62293 -0.93848 -0.14348 -0.16701 -0.36209 -0.28928 -0.39301 0.0025748 -0.22214 -0.18722 -1.2929 0.029888 0 -0.071205 -0.032494 -0.26273 -0.0063668 0 0.17226 -0.56206 -0.49663 -0.00013862 -1.2929 -0.49308 -0.026052 -0.83631 0.33221 -0.0026322 -0.0070576 -0.13626 -0.00041585 -0.22318 0.40902 -0.31061 -0.014503 -0.73687 -1.1182 -1.2929 -0.005261 -0.48323 -0.46142 -0.98406 -0.59546 -0.49392 -0.33133 -0.77158 -0.13931 -0.50152 -0.43592 -0.082402 -0.58692 -0.39986 -0.85281 -0.032492 -0.0037395 -0.056311 -0.020412 -0.19656 0.0097276 -0.53632 0.0075 -0.1798 -0.8424 -0.028491 -0.6192 -0.3323 -0.017116 -0.65966 -0.59857 -0.0013416 -0.89739 -1.0165 -0.65305 0.010424 -0.027671 -0.58667 -0.090096 -0.70469 -0.82749 -0.029721 0 -0.66187 -0.10355 -0.64311 -0.014503 0.0076392 -0.044144 -1.0857 -0.59445 0.050739 -0.0027157 0.006109 0.0069435 0.28723 0.52888 0.015168 0.057839 0.021603 -0.087579 -0.013402 -0.33133 -0.00097017 0.12299 -0.0069195 -0.56704 -0.062898 -0.52675 -0.68782 -0.96803 -0.43908 0.00041593 -0.81565 -0.004936 -0.10395 0.00013863 -0.44436 -0.37804 -0.87096 -0.28049 -0.59067 -0.37414 0.013492 -0.82414 -0.0088526 0.42368 0 -0.48533 -0.53348 0.081466 0.030216 -0.84058 -0.98358 0.007556 -0.020933 -0.0037395 0.13015 -0.47522 -0.011749 -0.34538 -0.80368 -0.036129 0.084354 -0.024935 -0.86578 -0.0036011 -0.015466 -0.64069 0.0080567 -0.51923 -0.56007 0.0022193 -0.0055652 -0.41124 -0.3401 -0.091158 -0.0024938 -1.0989 -0.35746 -0.14245 -0.51342 0 -0.92596 -0.4505 Deletion Peak 17 - CN values 10q21.1 chr10:48433736-58123241(probes 921307:925937) chr10:52739810-54061437(probes 922851:923874) chr10:53358323-53358900(probes 923363:923364) 0.059549 0.13042 Actual Copy Change Given -0.0041546 -0.011257 -0.41893 -0.13406 0.0351 -0.014805 -0.50701 -1.2578 -0.41025 -0.37008 -0.51846 -0.58061 -0.019726 0 -0.039011 -0.0063668 -0.0036011 -0.0066432 -0.12784 -0.070135 -0.34985 -0.28061 -0.02603 -0.024966 -0.73091 -0.098023 -0.62589 -0.22797 -0.11548 -0.18611 -0.88631 -0.018067 -0.40915 -0.43387 -0.73635 0.017749 0.0051359 -0.0045695 -0.073076 -0.4828 -0.38313 -0.0087146 -0.84363 -0.15477 -0.42338 -0.13605 -0.011887 -0.12095 -0.1779 -0.020138 -0.5482 -0.82154 0.1348 -0.020001 -0.88181 0.0055529 -0.57585 -0.81905 -0.39308 -0.80119 -0.5432 0.011166 -0.45576 -0.26361 -0.0069088 -0.64377 -0.029311 -0.0036011 0.004719 -0.53804 -0.41871 -0.51465 -0.64255 -0.0023553 0 -0.45651 -0.012713 -0.35704 -0.28275 0.00458 -0.033132 -0.50565 -0.0055375 -0.58853 -0.75711 -0.32484 -1.0141 -1.2879 -0.90023 -0.037898 -0.54865 0.2196 -0.017116 -0.45864 -0.49923 -0.4756 -0.56684 -0.458 -0.96581 -0.62093 -0.03286 -0.00055444 -0.002238 0 -0.16828 -0.37698 -0.36125 -0.84227 0.016668 -0.19249 -0.031496 -0.0051227 -0.29463 -0.011198 -0.084793 -0.53872 -0.29815 -0.40451 -0.0031859 0 -0.0048461 -0.034904 -0.93238 -0.33952 -0.22613 -0.0019399 -0.014346 -0.0098185 -0.83405 -0.69033 0.023145 0.0034595 -0.65534 -0.74959 -0.037163 -0.0018014 0.086088 -0.14348 -0.046718 -0.17259 -0.86806 -0.66698 -0.47194 -0.091155 -0.44992 -0.10723 -0.015684 0.0044411 -0.29721 0 -0.33445 -0.66679 -0.0088526 -0.030813 -0.18282 -0.61508 -0.54441 -1.1679 -0.31249 -0.38694 -0.3866 -0.16764 -0.38487 -0.72888 -0.0067813 -0.00069303 -0.60293 -0.83946 -0.55942 -0.67994 -0.24934 -0.86433 0.00041593 -0.56565 -0.052267 -0.55857 -0.36556 -0.2198 0.0024969 -0.55387 -0.025072 -0.8244 -0.23887 -0.36884 -0.0045344 -0.042652 -0.53165 0.0034687 -0.41729 0.0058309 0.0011093 -0.0059522 -0.024388 -0.038578 -0.027398 -0.40854 -0.14091 -0.1025 -0.00027724 -0.92421 -0.40272 -0.78167 0 -0.91123 -0.61085 -0.90168 -0.14348 -0.16701 -0.36107 -0.28928 -0.39301 0.0025748 -0.21639 -0.18722 -0.40625 -0.60777 0.0054139 -0.071205 -0.078187 -0.26273 -0.0063668 0 -0.66596 -0.54915 -0.47786 -0.00013862 -0.048484 -0.49308 -0.026052 -0.81827 -0.026444 -0.0026322 -0.0070576 -0.13626 0.0026357 -0.22318 -0.49648 -0.31061 -0.031562 -0.73687 -0.062404 -0.96143 -0.005261 -0.46812 -0.46142 0.001803 -0.039801 -0.47522 -0.33133 -0.77158 -0.13931 -0.48541 -0.43592 -0.31849 -0.53723 -0.39986 -0.82952 -0.022826 -0.0037395 -0.052936 -0.020412 -0.19656 -0.0018014 -0.53632 -0.70621 -0.1798 -0.81953 -0.028491 -0.6192 -0.3323 -0.017116 -0.65966 -0.59857 -0.0013416 -0.89739 0.0036076 -0.64033 -0.87041 -0.0095426 -0.58667 -0.090096 -0.70469 -0.82749 -0.01106 0 -0.6438 -0.10355 -0.64311 0.031718 0.010424 -0.044144 -0.74334 -0.59283 0.034784 -0.0027157 -0.88642 0.0069435 0.31505 0.49355 0.015168 0.049583 -0.55206 -0.087579 -0.0008316 -0.33133 -0.62179 -0.10203 -0.95319 -0.56704 -0.062898 -0.50898 -0.61422 -0.10513 -0.43366 -0.026694 -0.81565 -0.004936 -0.10395 -0.5292 -0.44436 -0.38116 0.014609 -0.28176 -0.59067 -0.37414 0.048404 -0.84586 -0.0088526 0.19758 0 -0.4826 -0.53348 0.081466 -0.61361 -0.016704 -0.5162 -0.0035455 -0.027917 -0.0037395 0 0.075415 -0.011749 -0.34538 -0.80368 -0.039801 -0.84763 -0.56833 -0.85559 -0.035738 -0.0059522 -0.64069 -0.85512 -0.50966 -0.56157 -0.20191 -0.0055652 -0.41124 -0.3401 -0.058196 -0.0024938 -0.74768 -0.34802 -0.14245 -0.42473 0 -0.8902 -0.4505 Deletion Peak 18 - CN values 10q23.31 chr10:89617158-89755074(probes 945223:945424) chr10:89617402-89735907(probes 945224:945412) chr10:89187178-90580143(probes 944985:945948) 1.8476e-27 7.5779e-25 Actual Copy Change Given -0.0041546 -0.5508 -0.41893 -0.13406 -0.58696 -0.0066694 -0.50701 -0.62045 -0.41076 -0.37008 -0.51846 -1.2361 0.0048579 0 0.035242 0.0098669 -0.0062258 -0.0089906 -0.48659 -0.070135 -0.35772 -0.28061 -0.022195 -0.0080244 -0.73091 -0.098023 -0.62589 -0.22797 -0.11548 -0.8386 -0.42325 -0.0084385 -0.40915 0.40377 -0.73635 -0.7829 0.0051359 -0.0045695 -1.0632 -0.4828 -0.36725 -0.0087146 -1.2929 -0.17474 -0.42338 -0.15226 -0.011887 -0.12095 -0.18333 -0.020138 -0.54411 -0.82154 -0.6703 0.0079175 -0.87338 0.0055529 -0.57585 -0.81905 -0.39308 -0.80119 -0.53551 -0.34649 -0.45576 -0.26361 -0.00032254 -0.58009 -0.0015243 -0.0069815 0.004719 -0.51445 -0.7962 -0.51465 -0.63604 -0.0023553 0 -0.18823 -1.2929 -0.35704 -0.28275 0.00458 -1.1969 -0.50565 -0.0062135 -0.59097 -0.75711 -0.32065 -0.92684 -0.67049 -0.90023 -0.037898 -0.54865 0.2196 -0.017116 -0.45864 -0.49923 -0.47406 -0.56684 -0.458 -0.95984 -0.62093 -0.03286 -0.00055444 -0.002238 0 -0.16828 -0.37698 -0.76141 -1.2507 0.0239 -0.19249 -0.56176 -0.0067813 -0.31529 -0.011198 -0.084793 -0.54552 -0.32832 -0.40451 -0.0031859 0 -0.0048461 -0.90783 -0.91387 -0.33952 -0.22613 -0.0019399 -0.012851 -0.0089906 -0.82056 -0.69033 0.023145 -1.1667 -0.62889 -0.10368 -0.037163 -0.0018014 0.08161 -0.16967 -0.039394 -0.17259 -0.86247 -0.66698 -0.47194 -0.091155 -0.44992 -0.10723 -0.015684 0.0044411 -0.29721 0 -0.33445 -0.66679 -0.35419 -0.030813 -0.19801 -0.61508 -0.54441 -0.86271 -0.31249 -0.38694 -0.3866 -0.16764 -0.35601 -0.7139 -0.0067813 -0.00069303 -0.61191 -0.83349 -0.55942 -0.67994 -0.24934 -0.63079 0.00041593 -0.56565 -0.052267 -0.52256 -0.36556 -0.2198 0.0024969 -0.55387 -0.025072 -1.2929 -0.23887 -0.36884 -0.62691 -0.042652 -0.53053 0.0063871 -0.42855 0.0058309 -0.60912 0.0034687 -0.024388 0.016286 -0.027398 -0.12817 -0.14091 -0.1025 -0.00027724 -0.92421 -0.38122 -0.78167 -0.50504 -0.90858 -0.60419 -1.2929 -0.14348 0.53837 -0.36473 -0.28928 -0.39301 0.0025748 -0.21639 -0.18722 -0.38949 -0.60777 0.0054139 -0.071205 0.02324 -0.25404 -0.0063668 0.0114 -0.66596 -0.54915 -0.46664 -0.00013862 -0.02151 -0.49308 -0.035448 -0.81441 -0.017941 -0.0026322 -0.0070576 -0.13626 0.0026357 -0.22318 -0.49648 0.14266 -0.020138 -0.90798 -0.062404 -0.96143 -0.005261 -0.48583 -0.46142 0.0041667 0.27904 -0.74638 -0.67536 -1.2929 -0.13931 -0.48541 -0.43592 -0.31849 -0.53723 -0.40351 -0.69124 -0.022826 -0.0037395 -0.025483 -0.020412 -0.19656 0.023005 0.3923 -0.70621 -0.1798 -0.81953 -0.028491 -0.86161 -0.3323 -0.017116 -0.64666 -0.59857 -0.0013416 -0.89739 0.0036076 -0.64033 -0.84147 0 -0.58667 -0.090096 -0.70469 -1.2929 -0.01106 0 -0.6433 -0.10355 -0.64311 -0.0026322 0.010424 -0.055731 -0.74334 -0.59283 -0.039333 0.0063871 -0.88642 0.0069435 0.31505 -0.57061 0.015168 -0.78553 -0.54522 -0.087579 -0.0008316 -0.33133 -0.62179 0 -1.2929 -0.56704 -0.062898 -0.51362 -0.59439 -0.077078 -0.42239 -0.023977 -0.81565 -0.0092183 -0.20261 -0.5292 -0.44436 -0.38116 0.014609 -0.28176 -0.59067 -0.37414 0 -0.83454 -0.0088526 0.19758 0 -0.76886 -1.1151 -0.71951 -0.61361 -0.63944 -0.5162 -0.0011916 -0.027917 -0.0037395 0.035456 0.075415 -0.011749 -0.32739 -0.80368 -0.039801 -0.81005 -0.56029 -0.85186 0.0036076 -0.0059522 -0.64069 -0.85512 -0.5065 -0.56157 -0.20191 -0.0055652 -0.86751 -0.3401 -0.058196 -0.0024938 -0.49975 -0.34802 -0.66374 -0.41498 0 -0.87813 -0.4505 Deletion Peak 19 - CN values 10q26.3 chr10:134944852-135093385(probes 973695:973731) chr10:135004075-135093385(probes 973721:973731) chr10:132126379-135534747(probes 973053:973777) 6.967e-08 0.00063412 Actual Copy Change Given -0.0041546 -0.5508 -0.41893 -0.17658 -0.58696 -0.00071938 -0.50701 -0.64462 -0.41774 -0.37008 -0.51846 -0.61632 0.0048579 0 -0.094592 0.0098669 -0.0094482 -0.0089906 -0.11783 -0.070135 -0.35772 -0.28061 -0.022195 0 -0.74647 -0.098023 -0.62589 -0.22797 -0.11548 0.32087 -0.42325 -0.0084385 -0.40915 -0.44048 -0.73635 0.013139 0.0051359 -0.024861 -0.61172 -0.4828 -0.45891 0.77522 -0.83841 -0.17474 -0.42338 -0.15226 -0.011887 -0.12095 -0.23062 -0.020138 -0.54411 -0.81753 -0.6703 0.0035061 -0.92934 0.0055529 -0.57585 -0.81905 -0.39308 -0.80577 -0.53551 -0.34649 -0.66468 -0.26361 -0.011105 -0.648 -0.44016 -0.0069815 0.004719 -0.52171 -0.4197 -0.51465 -0.6449 -0.0023553 0 -0.18823 -0.93681 -0.35704 -0.28477 0.00458 -0.042838 -0.56283 -0.0062135 -0.61374 -0.78371 -0.32065 -1.0201 -0.72724 -0.90023 -0.046989 -0.54865 -0.23814 -0.017116 -0.45864 -0.49923 -0.47406 -0.56684 -0.458 -0.95984 -0.63102 -0.03286 -0.00055444 -0.002238 0.0036479 -0.16828 -0.37698 -0.76141 -0.84002 0.011403 -0.19249 -0.56176 -0.0067813 -0.31529 -0.011198 -0.084793 -0.54552 -0.39002 -0.40451 -0.0031859 0 -0.0048461 -0.059 -0.92823 -0.33952 -0.32832 -0.0019399 -0.012851 -0.0089906 -0.83246 -0.81848 0.062871 -0.65753 -0.62757 -0.77243 -0.035448 -0.0018014 0.045282 -0.15106 -0.039394 -0.17259 -0.87421 0.58471 -0.49795 -0.091155 -0.44992 -0.10723 -0.019943 0.0044411 -0.29721 0 -0.33445 -0.66679 -0.36556 -0.030813 -0.218 -0.61508 -0.54441 -0.60342 -0.30768 -0.38694 -0.38856 -0.16764 -0.35601 -0.71704 -0.0067813 -0.00069303 -0.61191 -0.83349 -1.2929 -0.67994 -0.24618 -1.2929 0.00041593 -0.56565 -0.11173 -0.64638 -0.36556 -0.2198 0.0024969 -0.55387 -0.10211 -0.84273 -0.23887 -0.36884 -0.62691 -0.042652 -0.54925 0.0063871 -0.42855 0.0058309 -0.63112 0.0034687 -0.020317 -0.019177 -0.027398 -0.12817 -0.14091 -0.22711 -0.03095 -0.94335 -0.44994 -0.78167 -0.50504 -0.99458 -0.60419 -1.2929 -0.14348 -0.1609 -0.39409 -0.28928 -0.43316 0.0025748 -0.21639 -0.18722 -0.39635 -0.61297 -0.56813 -0.071205 -0.019908 -0.30398 -0.0063668 -1.0616 -0.66596 -0.54915 -0.51027 0.011539 -0.047369 -0.49308 -0.035448 -0.81441 -0.041024 -0.0026322 -0.0070576 -0.13626 0.0026357 -0.22318 -0.52752 -0.31073 -0.020138 -0.18771 -0.062404 -0.96143 -1.2929 -0.48583 -0.47747 0.0058309 -0.19936 -0.8001 -0.67536 -0.77714 -0.13931 -0.48604 -0.43592 -0.31576 -0.53723 -0.40351 -0.88429 -0.023977 -0.006387 -0.05138 -0.020412 -0.19596 0.023005 -0.58235 -0.70621 -0.1798 -0.89252 -0.028491 -0.61844 -0.3323 -0.017116 -0.6767 -0.056307 -0.0013416 -0.90549 0.0036076 -0.69396 -0.86662 -0.027535 -0.58667 -0.090096 -0.71644 -0.8309 -0.048997 0 -0.69505 -0.10355 -0.64311 -0.0026322 0.010424 -0.055731 -0.74334 -0.59283 -0.039333 0.057939 -0.88642 0.0069435 -0.87883 -0.021098 0.015168 -0.78553 -0.54522 -0.22418 -0.016213 -0.33133 -0.69674 0 -0.95688 -0.56704 -0.062898 -0.5191 0.4765 -0.077078 -0.87471 -0.067056 -0.81565 -0.0092183 -0.20261 -0.5292 -0.44235 -0.38116 0.014609 -0.28132 -0.59067 -0.37414 0 -0.86051 -0.012438 0.15621 0 -0.48281 -0.58758 -0.71951 -0.61361 -0.10724 -0.5162 -0.0011916 -0.027917 -0.0037395 0.035456 0.051791 -0.011749 -0.34266 -0.80368 -0.038306 -0.8308 -0.59682 -1.0622 0.0036076 -0.0059522 -0.65754 -1.0202 -0.5065 -0.56157 -0.20191 -0.0055652 -0.40374 -0.33987 -0.058196 -0.0024938 -0.49757 -0.34802 -0.66374 -0.41498 0.0087528 -1.1995 -0.4505 Deletion Peak 20 - CN values 11p15.5 chr11:2320967-2406244(probes 974323:974355) chr11:2352355-2363212(probes 974334:974336) chr11:2351775-2384751(probes 974333:974350) 0.22736 0.22814 Actual Copy Change Given -0.0089906 -0.58504 -0.04726 0 -0.6119 0.0053874 0.00055459 -0.62546 -0.009935 0.0073609 0.013772 -0.077787 0.012237 0.00069327 -0.63982 -0.40738 -0.00069303 0.00083195 0.0043021 0.0015255 0.20369 -0.28192 0.47169 0.92574 0.0070826 -0.012531 0.0030522 -0.50121 -0.12356 0.060892 0.39637 0.015168 0.37298 0.7862 -0.14747 -0.75223 -0.052396 0.23643 -0.19312 0.3535 -0.015741 -0.0098185 -0.36295 -0.045499 0.0467 -0.1479 -0.0098185 -0.065313 -0.050395 -0.019177 -0.0060904 0.0073609 0.011261 -0.01106 -0.89962 -0.0047079 -0.4695 0.12366 -0.15349 0.77695 -0.5426 0.0019863 -0.73661 -0.25782 -0.011794 -0.16625 -0.0067813 0.0020805 -0.030813 -0.18358 -0.41937 -0.023977 -0.63026 0 -0.049154 0.057653 0.022024 0.021183 -0.19285 -0.0062286 -0.70794 0 0.00597 -0.58686 -0.77846 -0.085722 -0.14004 0.33189 0.78968 -0.4086 -0.54774 -0.0071958 -0.062092 -0.44383 0.013492 -0.0022168 -0.31891 -0.067993 -0.30757 -0.014951 -0.035176 -0.0093385 -0.014577 -0.0024536 -0.15911 -0.00048161 -0.24922 -0.017391 -0.0038256 0.032986 -0.04211 -0.0026322 -0.66152 0.91885 -0.21441 -0.54965 -0.35988 -0.0083005 -0.0038779 -0.06652 0.0048579 0 0.010424 0.96864 0 -0.60022 -0.018211 -0.029311 -0.037755 -0.18886 -0.50281 0.038762 -0.0068676 -0.78471 -0.026441 -0.0033243 -0.50846 0.11829 -0.041431 -0.078622 0.024689 -0.76347 -0.16434 -0.12629 -0.11045 -0.74329 -0.40081 0.010842 0.30106 -0.68168 0.1637 -0.66457 0.0064976 -0.042548 -0.37403 -0.5651 -0.0073339 0.5352 0.043865 0.0030522 -0.18999 0.14103 -0.0080244 -0.025072 -0.0020784 -0.0049844 -0.60138 -0.016237 0.015519 0.33529 -0.0041546 -0.065651 -0.065313 -0.069064 0.16873 -0.15635 -0.042924 -0.057741 0.39496 0.010564 -0.074277 -0.0033243 -0.080141 -0.012438 0.0029487 -0.12082 0.020063 0.0030397 0.052525 -0.71684 -0.15886 -0.023292 -0.079343 -0.52261 0 -0.134 0.05025 -0.56853 -0.010784 0.031155 -0.58608 -0.0042929 -0.51362 -0.013093 0 0 -0.38493 -0.22761 -0.90658 0.13087 0.36601 -0.069792 -0.028901 -0.18559 0.41666 0.05153 -0.0042929 -0.24849 -0.82776 -0.26515 -0.026304 -0.0091286 -0.50277 -0.46653 0.019643 -0.00097017 -0.023703 0 -0.037082 -0.8226 -0.016154 0.31562 -0.0055375 -0.0011087 -0.0048461 -0.12121 0.40735 0.050819 0.021463 -0.029584 -0.5273 0.040468 -0.02603 -0.046583 0 -0.93393 -0.15848 -0.80277 -0.00069303 -0.36147 -0.13738 -0.48744 -0.1694 -0.047395 -0.52573 -0.05037 0.71603 0.034395 -0.096704 -0.094848 -0.05096 -0.0021813 0.018243 0.28834 0.013632 -0.056981 0.013632 0 0.0026357 -0.73858 -0.016026 -0.0083005 0.43361 -0.0071517 -0.93384 -0.017254 -0.48344 -0.89442 -0.03395 -0.13329 -0.0047079 0 -0.018216 0.32761 0.016845 -0.047936 -0.29058 -0.033405 0.00013863 0.05466 0.32674 -0.039258 -0.56992 -0.16576 -0.88743 -0.62276 0.013772 -0.027671 -0.50443 0.034395 2.2136e-05 0.0041632 -0.0077482 0 -0.048207 0 0.04883 -0.96282 -0.56922 0.062937 0.1933 -0.60138 0.21776 -0.42582 0.25058 0.037217 -0.0026343 -0.88569 -0.0048461 -0.61319 0.55992 -0.91891 -0.198 -0.0054783 -0.39386 0.010006 0.1006 -0.017529 0.32882 0.001803 0.0065823 -0.00041585 -0.30663 0.0047653 -0.0092666 0.39911 -0.046122 -0.020796 0.00055459 -0.2023 -0.029175 -0.0060904 -0.066252 0.55107 0.014051 -1.0053 0.30841 -0.88054 0.0077783 -0.78908 0.39857 -0.0019399 0.40661 -0.59565 0.00041593 0.0028856 -0.4163 -0.11874 -0.051859 -0.0051227 0 0.062508 0.16715 0.017404 -0.7578 -0.005261 -0.010646 Deletion Peak 21 - CN values 11q23.3 chr11:113343413-117301939(probes 1036231:1039026) chr11:115497697-115501608(probes 1037766:1037767) chr11:90634837-135006516(probes 1022181:1050585) 3.6825e-28 3.6825e-28 Actual Copy Change Given -0.0040162 -0.58877 -0.04726 -0.24703 -0.62022 -0.014529 0.00055459 -0.62201 -0.012438 -0.37132 -0.0011087 -1.0757 0 -0.43572 -0.6394 -0.40097 -0.00069303 0.00083195 -0.0011087 -0.20386 -0.40948 -0.28542 -0.027261 -0.47148 0.0070826 -0.0056757 0.0030522 -0.50121 -0.12356 -0.44397 0.39637 -0.092345 0.37298 0.7862 -0.13807 -0.75223 -0.052396 0.23643 -0.20286 0.35824 -0.38873 -0.9253 -0.38403 -0.045499 -0.8009 -0.1479 -0.83881 -0.065313 -0.062864 -0.024388 -0.0027707 -0.010232 0.021463 -0.021647 -0.024524 -0.0047079 -0.4695 0.079165 -0.15349 -0.80294 -1.0936 -0.33487 -0.7559 -0.25891 -0.011794 -0.18194 -0.44512 0.0020805 -0.0056757 -0.16816 -0.41608 -0.036946 -0.63026 -0.59964 -0.78328 0.047552 -0.92585 -1.208 -0.14322 -0.0062286 -0.70244 0.010564 -0.00023943 -0.58637 0.021904 -0.32391 -0.10315 -0.64706 -0.89343 -0.41025 -0.4787 -0.0034627 -0.086821 -0.46067 0.012954 -0.0022168 -0.31891 -0.0053992 -0.30757 -0.61825 -0.033889 -0.006505 -0.00057558 -0.86686 -0.15911 -0.00034301 -0.75314 -0.018078 0.0047714 -0.80061 -0.58902 -0.63614 -0.66616 0.0086135 -0.21441 -1.269 -0.60671 -0.0083005 -0.0038779 -0.076479 0.0048579 -0.80587 0.0023581 -0.3755 0 -0.60022 -0.016979 -0.0062286 -0.015725 -0.17208 0.034048 -0.6495 -1.2929 -0.78648 -0.49892 -0.011069 -0.52317 -0.8364 -0.023292 -0.078622 -0.8868 -0.72263 -0.50142 -0.1321 -0.093816 -0.73687 -0.40169 -0.64968 -0.3133 -0.68843 0.1637 0.04885 0.004072 -0.037354 -0.37887 -0.54703 -0.0073339 -0.58618 -0.68524 0.003191 -0.18999 -0.16663 -0.78218 -0.71791 -0.0020784 -0.0049844 -0.5852 -0.016237 0 0.32093 -0.91552 -0.047194 -0.059942 -0.57358 0.19602 -0.14091 -0.041024 -0.057741 -0.36431 -0.55987 -0.074277 0.01652 -0.080141 -0.012989 0.0029487 -0.12082 0.021603 -0.68278 -0.91394 -0.72345 -0.53459 -0.027261 -0.079343 -1.1264 -0.90555 -0.134 0.05025 -0.57269 -0.010784 -0.92152 -0.59918 -0.0042929 -0.5316 -0.010922 0.0019418 0 -0.38716 -0.81737 -0.39602 -0.29957 0.38049 -0.069792 -0.028901 -0.18559 0.39885 -0.2446 -0.0031859 -0.38728 0 -0.25743 -0.026304 0.0087528 -0.50225 -0.46653 0.031577 -0.89871 -0.056307 -0.010508 -0.037082 -0.81483 -0.496 -0.36924 -0.51655 -0.0011087 -0.62874 -0.30234 -0.51471 -0.29497 -0.021709 -0.029946 -0.52362 -0.95919 -0.95223 -0.47438 -0.45436 -0.94377 -0.14039 -1.2929 -0.31389 0.38105 -0.13738 -0.51651 0.40314 -0.18408 -0.52573 0.68198 -0.84699 0.034395 -0.14618 -0.040198 -0.049289 -0.0021813 -0.01354 0.18828 0.013632 -0.71817 -0.81376 -0.0047079 -0.62131 -0.72811 -0.46408 0.013599 0.46639 -0.95968 -0.88612 -0.024661 -0.63518 -0.86113 -0.033677 -0.14322 -0.013677 -0.7139 -0.018216 0.361 -0.61892 -0.64396 -0.10224 -0.65155 -0.9797 -0.0083005 0.34534 -0.74563 -0.58671 -0.35994 0.016611 -0.027535 0.001803 -0.85238 -0.52771 0.021994 -0.80407 0.0075 -0.0036011 -0.0036011 0.32963 0 0.04883 -0.95826 -0.12304 -0.16502 -0.49673 -0.60138 -1.0499 -0.42724 -0.6214 -0.83179 -0.010404 -0.87096 -0.0051227 -0.56816 -0.95442 -0.88333 -0.198 0.0062676 -0.36906 -1.0002 0.077718 -0.46642 -0.56865 0.001803 0.013353 -0.70702 -0.30986 0.0047653 -0.0092666 -0.092213 -0.00063729 -0.023521 0.00055459 -0.76865 -0.50634 -0.0060904 -0.06719 -0.82911 -0.41267 -0.38033 0.31065 -0.86161 -0.49986 -0.78749 0.39857 -0.0019399 0.40594 -0.54482 -0.27774 -0.58816 -0.40606 -0.11874 -0.048616 -0.0051227 -0.5165 -0.3479 -0.68742 -0.9537 -0.80939 0.0036076 -0.44695 Deletion Peak 22 - CN values 12q23.3 chr12:76427480-133851895(probes 1091234:1124053) chr12:103976914-104163845(probes 1108059:1108220) chr12:87143826-111957254(probes 1097604:1112982) 0.00079981 0.00079729 Actual Copy Change Given 0.0043021 -0.013737 -0.42156 0 -0.62102 -0.029525 0.0037465 0.015652 0.32785 0.015866 0.0070826 0.3949 -0.0055375 -0.00080039 0.039337 -0.40893 -0.0018014 0 0 0.00027728 -0.014228 0.0011093 0 -0.0053992 0.021183 -0.01106 0.0011093 -0.13109 -0.35658 0.11194 -0.0038089 -0.015466 -0.39919 -0.01106 -0.72597 -0.0032593 0.00013863 0.0029133 -0.53348 -0.049682 0.16971 -0.0048461 0.0019418 0.092605 -0.012292 -0.14057 0.0066653 0.019223 -0.075612 -0.020206 -0.5434 -0.0081624 -0.15144 0.0095078 0 0.01419 0.14875 -0.39202 -0.11168 0.3408 0.48062 -0.0089463 -0.74394 0.006512 0.0070371 -0.18435 0.00069327 -0.007472 -0.91567 -0.058462 -0.20078 -0.019452 -0.025474 -0.0063785 -0.028901 -0.087712 0.8163 -0.30369 0.053379 -0.0034627 0.012097 -0.3401 0 0.033267 0.020566 -0.044415 -0.4622 -0.66901 -0.0015243 0.031295 0.1348 0.0024969 -0.0076527 -0.42473 0.021884 0.00055459 0.010703 0.0069435 0.033972 -0.0096806 -0.021559 0 0 -0.0032842 0.39778 0.00035014 0.024829 0.0077783 -0.84821 0.027357 0.4951 -0.048748 0.077574 -0.0077482 0.024969 -0.55497 -0.32251 -0.0060904 0.0033299 -0.075878 0.014051 0.35668 -0.0063668 0.33044 -0.032587 -0.0013858 -0.0030475 -0.0048461 0.003191 -0.25039 -0.45688 0.023837 -0.022692 0.010564 0.0024969 -0.0034007 0.094782 -0.72773 0.010564 -0.17107 0.01447 -0.069214 0 0.06208 0.090786 -0.72253 -0.021589 -0.64416 -0.0018014 0.0041632 -0.082401 -0.65343 0.00083195 -0.020549 -0.37909 0.027638 0.43783 0.45411 0 -0.0044312 0.0282 -0.16421 0.017963 0.0066032 0.0051359 0.0019418 -0.024661 0 -0.0036688 -0.23606 -0.42757 -0.013735 0.0048579 -0.55881 0.13322 0 -0.03335 -0.093805 0.020203 0 0.00027728 -0.0045695 -0.22625 -0.0027707 -0.0056406 0.010285 -0.52879 -0.0020784 0.03637 -0.024661 -0.20224 -0.025791 -0.053206 -0.52102 -0.021235 -0.12271 -0.19475 0.098415 0.0097276 -0.4935 -0.15771 0 -0.0078768 0.0076392 -0.20635 0.0094491 0.18711 -0.20999 0 -0.29904 0.020225 0.0027214 -0.21812 0.014888 -0.70557 -0.63231 0.0086135 -0.38873 -0.0066876 -0.24713 -0.028765 0.46978 0.12992 0.053521 -0.13445 -0.025739 -0.031905 0.021603 -0.0091286 0 -0.020478 -0.0038779 0.0034687 0.034959 0.0015255 -0.11574 -0.50521 0.075991 0.010564 -0.0045695 -0.52474 -0.95145 -0.00055444 0.03369 0.010285 0.0016642 0.0049969 0.010006 -0.34641 -0.15822 0.057704 -0.0079273 0.078897 -0.10684 -0.026304 -0.015054 0.01177 0 0.0023581 -0.016074 -0.014503 0.00064756 -0.00055444 -0.54118 -0.0018014 -0.091816 0.018383 -0.18005 -0.005261 -0.32535 0.0073609 -0.011582 -0.027808 0.00087621 0.010842 0.026923 -0.31459 0.0029133 0.74252 -0.3409 -0.0033243 -0.68369 0.0038854 -0.075345 -0.2642 -0.011749 0.085221 -0.040888 -0.0058405 -0.0047079 -0.55327 -0.061689 -0.58422 0.01509 -0.8814 -0.87845 0.0068044 -0.018902 -0.010094 -0.10893 -0.78114 0.0054139 0.00458 0.0049341 0.015168 0.03369 -0.0049844 0.011679 -0.005814 -0.025893 -0.089302 -0.59565 -0.88966 0.35724 0.55177 -0.82415 -0.017618 0 -0.0018014 0 0.66697 -0.88673 -0.053611 0.0093294 -0.13949 -0.9521 -0.38789 -0.010784 0.32028 0.001803 -0.21738 -0.0047079 0.12859 -0.28366 -0.0033152 0.45888 -0.020357 -0.024223 -0.017116 -0.1108 -0.47258 -0.00041585 -0.084511 -0.33468 0.012795 0.0087528 -0.011749 -1.2929 0.0012001 0 -0.60398 0.00013863 -0.50712 0.57898 0.029606 -0.0047355 -0.019863 0.011889 -0.038173 -0.0070576 -0.49059 -0.34927 0.17648 0.011261 -0.15003 0 0.01419 Deletion Peak 23 - CN values 13q34 chr13:95861243-115169878(probes 1168150:1180330) chr13:114987334-115169878(probes 1180330:1180330) chr13:114962278-115169878(probes 1180316:1180330) 0.098096 0.10152 Actual Copy Change Given -0.00055444 0 0.45649 -0.2497 0.5788 0.49936 0.00097064 0.027216 0.26483 -0.0047079 -0.5129 -0.61895 -0.025209 -0.010508 0.55496 -0.43574 -0.13755 0.0043983 -0.27941 0.0034687 -0.3424 -0.017529 0.47495 0.4163 0.011818 -0.0020784 -0.0027471 -0.50743 0 0.069194 0.42898 -0.023566 -0.0098185 0.40594 0.16085 -0.81158 -0.083067 -0.0041546 0.2287 0.35252 0.00041593 0.012237 0.0087528 -0.12082 -0.18232 -0.029514 -0.055689 0.021744 0.1114 0.010285 -0.0077482 0.028622 -0.064106 -0.0054409 1.402 -0.20586 -0.20864 0.45726 -0.4003 -0.017391 0.45496 -0.34557 -0.025483 0.27015 0.00037062 0.34226 -0.0069195 -0.18798 0.9361 0.21791 0.034254 0.1041 0.022725 0.0037465 -0.76903 -0.44706 -0.92158 -0.74246 -0.62265 -0.023155 0.0098621 0.077862 0.0013868 -0.57229 0.04344 0.0012481 -1.034 0.068808 -0.0053992 -0.43225 -0.19875 0.0072217 -0.038628 0.0416 -0.51146 -0.48953 -0.28917 0.38982 -0.30833 0.04741 -0.025209 -0.80953 -0.0027567 0.70706 -0.091392 -0.00034301 -0.35259 0.68087 -0.85525 0.085221 -0.046177 -0.017249 0.14786 -0.037626 0.18238 -0.024 -0.17689 -0.40119 0.0036076 -0.077745 0.028622 0.22422 -0.018765 1.2003 -0.4097 0.011425 0 -1.1596 0.0087528 0.227 0.05004 -0.0055467 0.47862 -0.77464 0.90895 0.81825 0.23132 -0.31774 -0.96724 0.21791 -0.041974 -0.054286 0.38996 -0.33653 0.40168 -0.7865 2.8271 -0.00069303 -0.61882 -0.029175 -0.098417 0.058081 -0.010646 -0.02151 0.012851 0.95694 -0.21181 0.55354 0.0282 0.0049969 -0.22576 0.1348 -0.1827 -0.77597 -0.0071958 0.00097064 -0.65919 0.68143 0.012029 0.32076 0.032422 0.010074 -0.0083896 0.022725 -0.10947 0.0076392 0.27269 -0.011976 0 -0.010508 -0.0030475 0.14459 -0.25055 -0.16536 -0.0030123 -0.036401 0.015566 0.072971 0.060794 0.015866 0.19603 0.017824 -0.14657 -1.2366 -0.016979 -0.12882 0.1094 -0.23264 0.018103 -0.049559 -0.87136 0.72244 0.3809 -0.89488 0.598 -0.016429 -0.41926 0.52696 0.05944 0.26624 -0.40223 -0.030327 0.040468 -0.18609 0.37976 -0.29355 0.011958 0.16535 0.013029 0.24361 -0.045906 0.46442 0.17664 0.17835 0.388 0.0015255 -0.061823 0.046417 -0.036622 0.59188 0.84454 0.3306 -0.00079364 0.13554 -0.63953 0.10804 -0.50717 -0.081871 -0.024524 0.2708 0.013448 -0.023018 -0.010094 -0.45811 -0.0037395 0.00013863 -0.075478 0.0090312 0.66393 -0.015879 -0.09824 -0.49153 0.59965 0.065226 0.87399 0.72565 0.57826 -0.41699 -0.08094 0.1664 -0.0013858 -0.0096452 0.61788 0.39811 -0.01191 0.80636 0.8048 0.11038 0.5649 -0.33103 -0.0089906 0.0037465 -0.023703 0.91527 -0.00055444 0.015308 -0.32728 -0.87518 -0.039258 -0.070937 0.0056919 0.1314 0.013772 0 0.31402 -0.0085766 0.068091 0.11038 0.0079175 -0.0033243 0.45258 -0.33871 -0.052396 -0.036522 -0.92681 0.021323 0.0069435 0.65387 -0.033814 -0.059807 0.82379 -0.015329 0.0027745 0.012795 -0.048072 0.018103 0.023566 0.023005 0.00027728 0.093185 -0.3356 0.88106 0.57309 0.061079 -0.56198 0.047268 0.012285 -0.84459 -0.0059019 0.35948 -0.88524 -0.0041546 -0.17917 0.29822 0.08161 0.020903 0.68496 -0.051181 1.0314 -0.0090709 -0.21997 0 0.42822 0.023332 0.57309 -0.55076 -0.68821 -0.053718 0.044999 0.024902 -0.49663 -0.011649 -0.057924 0.09667 -0.047531 -0.0085766 0.47804 -0.38649 0.00055459 0.016705 -1.2929 0.00013863 0.90291 -0.51609 0.0052749 0.003441 0.36707 0.033127 0.76101 0.75778 -0.14155 1.1963 -0.21425 -0.44566 1.0268 0.001803 0.0069435 Deletion Peak 24 - CN values 14q23.3 chr14:66963153-67658112(probes 1205931:1206147) chr14:66970921-67652098(probes 1205933:1206143) chr14:67331182-67467170(probes 1206026:1206068) 0.046369 0.062223 Actual Copy Change Given -0.0060312 -0.58003 0.047694 0.00041593 -0.59526 -0.013841 -0.51135 0.0058309 -0.010922 0.0029133 0.0063871 0.40256 -0.00052923 0 -0.61882 0.0034687 -0.0066432 -0.0008316 -0.13807 -0.0042929 -0.095516 -0.0085766 -0.021373 -0.15988 -0.077632 0.0066653 -0.0036011 0.52503 -0.3511 -0.17681 -0.42227 -0.012024 -0.012438 0.0058309 0.19314 6.51e-05 -0.032996 -0.0033243 -0.32135 -0.4848 0.00013863 -0.00013862 0.0069435 -0.14168 -0.089567 -0.15187 -0.0048461 0.013353 0.63306 -0.016017 -0.54199 0 -0.67021 0.014609 0.0026357 0.011261 -0.27308 -0.42533 -0.36646 0.0022193 -0.024935 -0.0028646 -0.74159 0.010967 0.00078663 -0.15477 0.0030522 0.83451 0.0029133 0.60919 -0.26793 -0.62684 -0.012713 -0.0044312 -0.0123 -0.43246 0.021603 0 -0.38235 -0.029175 0.010703 0.012097 -0.0044312 0.054091 0.018523 0.247 -0.51098 0.48509 0.00069327 -0.42189 0.072916 -0.74174 0.023145 -0.45747 0.49891 -0.00055444 -0.56614 0.44698 -0.28762 -0.0030475 0.0066653 0.00069327 0.00094949 -0.0039761 -0.37302 0.0088259 -0.03749 0.0063871 0.027269 0.016985 -0.03054 0 -0.66235 0.0083351 0.066086 0.51089 -0.2894 0.00097064 -0.00097017 0.048688 -0.0020784 -0.4023 0.00083195 0.34632 -0.40219 -0.0019399 -0.012989 -0.0091286 0 0.097106 0.02308 0.0072124 0.54548 0.0063871 -0.022802 -0.0096137 -0.51404 0.17332 -0.040073 -0.17272 0.075559 0.4519 0.10424 0.05908 -0.34211 0.021043 -0.057867 0.024268 0.0093098 -0.70109 -0.094327 -0.65882 0.0024969 -0.032041 -0.18421 -0.54411 -0.54935 -0.0071958 -0.020001 -0.007472 -0.30157 -0.13277 0 0.010982 0.00027728 -0.0036011 0.39678 -0.0092666 0.46665 -0.47162 0.0070826 0.0079849 0.00097181 -0.58304 0.12829 -0.54153 -0.37155 -0.22017 -0.0042929 -0.56724 0.011261 0.0037465 -0.22994 -0.3711 -0.0079892 0.12653 -0.52991 0.0036076 0.055658 -0.66846 -0.00097017 -0.7553 0.059937 -1.0595 -0.01037 0.16138 -0.19987 0.097542 -0.0038779 0.025531 0.58847 0.00458 0.00070279 -0.9008 -0.21923 -0.073343 -0.41634 -0.26504 0.033905 -0.2926 -0.40545 0.0042019 -0.22047 0.18556 -0.11127 0 0.0030522 -0.11508 -0.00059906 -0.25984 0.035947 -0.50598 0.12756 -0.035993 -0.47279 -0.0041546 -0.49183 -0.48638 -0.010508 0.015866 0.4375 -0.0059522 -0.0042929 0.028341 0.00097064 -0.26473 -0.014852 -0.31167 -0.034223 -0.0049844 -0.5228 0.018943 -0.0049844 0.029747 0.010703 -0.00055444 -0.036674 -0.00097017 -0.3304 -0.77923 0.020392 -0.0030475 -0.17219 -0.23716 0.48613 0.33626 0.0038854 -0.053206 -0.005814 0.17347 0.74861 -0.0014373 0.0086135 -0.53297 0.0049969 0.064368 0.0068044 -0.14926 -0.61949 -0.33542 0.022587 -0.65165 -0.034086 -0.95903 0.013911 -0.00041585 -0.31949 -0.040209 -0.023977 -0.36238 0.41764 -0.56477 -0.82725 0.043157 -0.27739 -0.010903 0.1789 0.51821 0.0066653 0.014248 -0.56883 -0.7123 -0.5937 -0.15702 -0.88706 0.0098669 0.00458 -0.02384 0.8202 0.019503 -0.88694 0.019643 0.00076966 0.011477 -0.23545 -0.30522 -0.18257 0.017963 -0.56813 0.13721 0.069574 -0.59838 -0.90525 -0.4174 0.33529 -0.38459 0.00018716 -0.82847 -0.0018014 -0.35433 0.20671 -0.80269 0.1382 -0.29235 0.089272 -0.9716 -0.37595 -0.010922 0.41731 -0.0060904 0.012516 -0.056307 0.05908 0.028247 -0.0038779 -1.0405 0.53805 0.65318 -0.0038779 -0.72672 -0.45971 -0.00082952 0 -0.79336 0 0.065513 -0.0098185 -0.41685 0.0038854 -0.0023553 -0.013572 0.0011093 -0.50888 -0.56684 -0.0012278 -0.0034904 0.37166 0.030029 0.74879 0.0044411 -0.4959 0.031155 -0.21948 0.024689 -0.75305 0.013074 0.0012481 Deletion Peak 25 - CN values 14q32.31 chr14:71578164-107349540(probes 1208486:1229490) chr14:101536028-101541633(probes 1227684:1227686) chr14:101536130-101559242(probes 1227685:1227700) 0.10277 0.16662 Actual Copy Change Given -0.0060312 -0.58003 0.076854 0.00041593 -0.59526 -0.002797 -0.51135 -0.63987 -0.010922 0.0029133 0.0063871 0.40256 -0.00052923 0.010842 -0.65127 0.0034687 -0.0066432 -0.0008316 0.17498 -0.0042929 -0.095516 -0.0085766 -0.021373 -0.15988 -0.077632 0.0066653 -0.0036011 0.52503 -0.3511 -0.19379 -0.89377 -0.012024 -0.012438 -0.91394 0.19314 -0.028837 -0.032996 -0.0033243 -0.32135 -0.4848 -0.015627 -0.025346 -0.010784 -0.14168 -0.089567 -0.15187 -0.034768 0.013353 0.56519 -0.021956 -0.54199 0 -0.67021 -0.040616 0.0026357 0.011261 -0.27308 -0.37081 -0.36646 0.026481 -0.022881 -0.0028646 -0.80995 0.00029403 0.00078663 -0.21701 0.0030522 0.83451 0.0029133 0.65903 -0.26793 -0.30932 -0.020549 -0.0044312 -0.022744 0.059366 -0.026195 0 -0.38235 -0.029175 0.010703 0.012097 -0.0044312 0.023706 -0.027124 0.247 -0.51098 0.41758 0.00069327 -0.42189 0.076135 -0.75297 -0.0023553 -0.46906 0.49891 -0.00055444 -0.56614 0.38634 -0.96624 -0.062417 0.0066653 0.00069327 -0.0091497 -0.010138 -0.37302 0.0088259 -1.1042 0.0063871 0.027269 0.0019175 -0.03054 0 -0.64621 0.0083351 0.082188 0.51089 -0.2894 -0.00027724 -0.00097017 0.048688 -0.0020784 -0.4023 0.0090312 0.33918 -0.40219 -0.0019399 -0.012989 -0.0091286 0 0.097106 0.02308 0.0072124 0.54548 -0.016567 -0.022802 -0.012108 -0.51404 0.17332 -0.12231 -0.17272 0.21238 0.4519 0.06177 0.05908 0.037705 0.021043 -0.057867 0.024268 0.23285 -0.70854 -0.094327 0.012655 -0.0013858 -0.032041 -0.21156 -0.54411 -0.54935 -0.61374 -0.03245 -0.007472 -0.30157 0.1658 0 -0.73008 -0.0055375 -0.0036011 0.39678 -0.0092666 0.46665 -0.48876 0.0070826 0.0079849 0.0094491 -0.58304 0.12829 -0.57011 -0.39286 -0.22291 -0.39219 -0.56724 0.011261 0.0037465 -0.24192 -0.3711 -0.0079892 0.11521 -0.55086 0.0036076 0.055658 -0.67884 -0.00097017 -0.014916 0.059937 -0.54512 -0.01037 0.14 -0.19987 0.097542 -0.065447 0.025531 0.58847 0.00458 -0.0030147 -0.92627 -0.21923 -0.07401 -0.41634 -0.26504 0.033905 -0.2926 -0.40545 0.15854 -0.22047 0.18556 -0.72763 0 0.0030522 -0.11508 -0.00059906 -0.25984 0.035947 -0.55837 0.12756 -0.035993 -0.5149 -0.0041546 -0.5293 -0.49816 -0.010508 0.013632 0.41798 -0.0059522 -0.0042929 0.028341 0.023005 -0.26473 -0.051119 0.036229 -0.034223 -0.0080244 -0.5228 -1.2929 -0.0049844 -0.041838 0.010703 -0.00055444 -0.074277 -0.010834 -0.36329 -0.77923 0.099339 -0.064361 -0.17523 -0.23716 0.48613 0.33626 -0.0026322 -0.053206 -0.005814 0.17287 0.74442 0.01046 0.0086135 -0.53297 0.035524 0.064368 0.00027728 -0.14926 -0.61949 -0.33542 -0.018902 -0.69578 -0.075778 -0.98409 -0.0067813 -0.00041585 -0.32982 -0.040209 -0.059135 -0.36238 0.2313 -0.58206 -0.82725 0.35577 -0.27739 -0.010903 0.17825 0.51821 -0.014916 0.019083 -0.60781 0.069812 -0.5937 -0.15702 -0.8552 0.0098669 0.00458 -0.02384 -0.020138 0.019503 -0.14409 0.019643 0.00076966 0.00041593 -0.23545 -0.30522 -0.18257 0.011121 -0.59302 0.13721 0.029466 -1.1696 -0.94255 -0.42443 0.31819 -0.38459 0.00018716 -0.051856 -0.0018014 -0.35433 -0.79314 0.013492 0.1382 -0.29235 0.070673 -0.99999 -0.39808 -0.010922 0.41731 -0.0060904 -0.48932 -0.056307 0.05908 0.028247 -0.0038779 -0.037082 0.53805 0.65318 -0.0016629 0.064013 -0.49585 -0.00082952 0 -0.79336 0 0.034739 -0.0098185 -0.41937 0.0038854 -0.0023553 -0.013572 0.0044411 -0.53307 -0.56684 -0.0012278 -0.0034904 0.34502 0.018383 0.74879 -0.03847 -0.0045695 0.031155 -0.23929 0.024689 -0.80674 0.0055529 0.0012481 Deletion Peak 26 - CN values 15q13.3 chr15:28560817-33605300(probes 1232151:1233277) chr15:33044592-33490447(probes 1232797:1233171) chr15:1-58835316(probes 1229491:1248318) 1.0926e-08 0.010127 Actual Copy Change Given 0.0027745 0.014828 -0.41245 0.07254 -0.57881 0.0090048 0.016286 0.58686 -0.032587 0.012795 0.014888 0.3299 0.0080567 -0.43025 1.2531 -0.41937 -0.043897 0.51176 -0.081738 0.0086135 0.25074 0.27679 -0.026714 0.44155 -0.023703 -0.060345 0.017824 0.047447 0.1619 0.079979 0.012864 0.095072 0.39147 0.035665 -0.74098 0.86761 0.011679 0.45258 -0.54522 0.35889 0.0011093 -0.90099 0.015028 0.030873 -0.10815 0.59793 -0.020275 0.0054139 -0.12069 0.0052749 0.020623 0.80578 0.032986 -0.83704 0.0026357 0.78119 -0.29874 -0.38308 0.064797 0.045566 0.0026357 0.010407 -0.86424 0.80556 -0.0065501 0.14712 0.0063871 0.034818 0.80364 0.2642 -0.20349 0.2858 0 0.55602 -0.03245 0.072396 0.017824 -0.3567 1.7059 0.0011093 -0.76723 0.03031 -0.0044312 -0.00069303 0.023566 -0.047395 0.30125 -0.68551 -0.0036011 -0.40771 -0.54421 -0.73459 0.02539 -0.46653 0.046984 0.0037465 0.025812 0.36871 -0.26564 -0.071606 0.017544 -0.0094046 -0.0044523 0.022485 0.43699 0.017198 1.7404 0.015308 -0.00036351 0 -0.56246 0.0012481 -0.64462 -0.95294 0.098415 -0.5349 0.093621 0.0022193 -0.00097017 -0.033677 -0.0047079 0.2355 -0.92547 -0.33364 0.0026357 -0.0011087 0.30889 -0.016135 -0.010094 0.12285 0.009122 0.021734 0.52107 0.71434 -0.01849 0.00083195 0.067375 0.34404 -0.056307 -0.031905 0.019783 -0.41685 0.09304 0.0029133 -0.3206 -0.10592 0.0011676 0.0065262 0.28786 0.0066653 0.41815 0.1177 -0.0060904 0.32495 0.085191 -0.53338 -0.0025538 -0.015466 0.045991 -0.0073339 -0.0081624 -0.16663 0.23938 -0.0030475 0.00083195 0.00083195 0.46144 -0.0048461 0.44689 -0.4767 0.44715 0.015515 -0.058731 -0.018902 -0.23129 0.51751 0.26264 0.027828 -0.10026 -0.56157 0.0016642 -0.38112 0.077574 -0.12278 -0.62147 0.11844 -0.51805 -0.032041 -0.23251 -0.04726 0.17757 -0.010508 0.082621 0.805 -0.94525 -0.12011 0.10401 -0.56783 -0.032723 0.060079 0.54436 0.013074 0.16821 0.017124 -1.0027 0.031014 0.18662 -0.28727 0.034328 -0.27774 0.0011883 -0.049754 -0.21837 0.18071 0.4659 -0.48617 -0.0085766 -0.36318 0.048074 -0.25876 0.035383 0.20488 1.3867 -0.0084385 0.1616 -0.0019399 -0.029038 0.02806 -0.0071958 0.013353 0.41228 0.010982 -0.011611 0.19117 0.013632 0.17211 -0.49429 -0.31085 -0.012024 -0.0063668 0 -0.12226 -0.016017 0.020623 0.0083351 0.0087233 0.47272 -0.38929 0 0.44494 0.20983 0.0077783 0.13853 0.58023 0.47838 0.49718 0.013213 0.19938 0.082476 0.2084 -0.016979 0.010321 -0.0022168 -0.54613 0.025531 -0.31809 0.7637 -0.13626 0.013074 0.029268 0.010703 -0.0016629 0.4353 -0.96184 0.035806 -1.0282 0.0027745 0.0052749 -0.89391 -0.57091 -0.0067813 0.068091 0.031014 -0.020961 0.079591 -0.00013862 0 0.5142 -0.0096806 0.030451 0.31996 -0.023292 -0.013402 -0.36457 0.060651 -0.57891 0.010152 -0.84803 -0.5898 0.010006 -0.77699 -0.54209 0.0019418 0.008892 0.15382 0.0097276 0.15547 0 -0.57229 -0.032314 -0.36895 -0.59585 -0.046718 0.40511 -1.1714 0.034838 -0.0041061 -0.61056 -0.0042929 -0.16017 -0.78513 -0.88997 0.14652 0.2735 0.10585 0 -0.84539 -0.0096806 -0.05725 -0.01037 0.04741 -0.68752 -0.71381 0.023052 0.013074 0.47701 0.30752 0.71984 0.0086135 -0.1524 -0.47628 0.0076392 -0.0083005 -0.74299 0.017824 0.033409 0.4932 -0.0062286 0.010982 0.032845 -1.2929 0.010006 0.45871 0.0068044 0.0038854 -0.0072234 -0.011473 -0.0030475 0.73262 0.004719 0.45956 0.076566 0.18586 0.0062481 0.027544 -0.0044312 0.013632 Deletion Peak 27 - CN values 15q21.1 chr15:44702831-45026122(probes 1239678:1239815) chr15:45001788-45013397(probes 1239794:1239803) chr15:1-58835316(probes 1229491:1248318) 3.6878e-13 3.632e-09 Actual Copy Change Given 0.0027745 0.014828 -0.41245 0.07254 -1.2186 0.0090048 0.016286 0.58686 -0.043873 0.012795 -0.017123 0.3299 0.0080567 -0.42974 0.031295 -0.0034627 -0.043897 0.51176 -0.081738 0.0086135 0.25074 0.24575 -0.5431 0.44155 -0.023703 -0.060345 0.017824 0.19679 0.1619 0.079979 0.012864 0.095072 0.39147 -0.41575 -0.74098 0.013279 0.011679 0.45258 -0.53327 0.35889 0.0011093 -0.90099 0.015028 0.030873 -0.10815 0.59793 0.41346 0.0054139 -0.12069 0.0052749 0.020623 -0.81933 0.032986 -0.85424 0.0026357 -0.014503 -0.29874 -0.38308 0.064797 0.045566 0.0026357 0.056701 -0.73024 -0.52079 -0.0065501 0.14712 0.0063871 0.034818 0.80364 0.2642 -0.20865 0.2858 0 0.55602 -0.03245 0.072396 0.017824 -0.3567 1.7059 0.0011093 -0.024524 0.03031 -0.0044312 -0.00069303 0.023566 -0.047395 0.30125 -0.68551 -0.0036011 -0.42272 -0.54421 -0.0044312 -0.0053096 -0.46653 0.046984 0.0037465 0.025812 0.36871 -0.26564 -0.11837 0.017544 -0.0094046 -0.0044523 0.022485 0.42519 0.017198 -0.33295 0.015308 -0.00036351 0 -1.2929 -0.62446 -0.2726 -0.90259 0.098415 -0.54078 0.093621 0.0022193 -0.00097017 -0.033677 -0.0047079 0.2355 -0.92547 -0.33364 -0.40672 -0.0011087 -0.34687 -0.016135 -0.010094 0.12285 0.009122 0.024106 0.52107 0.0029133 -0.01849 0.00083195 0.067375 0.32431 -0.056307 -0.031905 0.019783 -0.41685 0.09304 0.0029133 -0.3206 -0.10592 0.0011676 0.0065262 0.28786 0.0066653 0.41815 0.1177 -0.0060904 0.32495 0.085191 -0.53338 -0.0025538 -0.026001 0.045991 -0.0073339 -0.0081624 -0.16663 0.23938 -0.0030475 0.00083195 0.00083195 0.46144 -0.0048461 0.44689 0.1041 0 -0.018424 -0.058731 -0.018902 -0.23129 0.51751 0.26264 0.027828 -0.10026 -0.56157 0.0016642 -0.38112 0.077574 -0.42996 -0.62147 0.11844 -0.51805 -0.032041 -0.23251 -0.04726 0.17757 -0.010508 0.082621 0.10074 -0.036674 -0.12011 0.10401 -0.56783 -0.032723 0.060079 0.54436 0.013074 0.16821 0.017124 -1.0027 0.031014 0.18662 -0.28727 0.034328 -0.26829 0.0011883 -0.049754 -0.21837 0.18071 0.4659 -0.48617 -0.0085766 -0.3584 -0.77857 -0.25876 0.035383 0.20488 -0.67453 -0.0084385 0.15786 -0.0019399 -0.97082 0.022865 -0.85932 0.0114 0.41228 0.010982 -0.011611 0.19117 0.013632 0.17211 -0.53901 -0.31085 -0.012024 -0.0063668 0 -0.029175 -0.016017 0.020623 0.0083351 0.0087233 -0.57901 -0.75402 0 0.41245 0.20983 -0.020549 0.13853 0.58023 0.45513 0.49718 0.013213 0.19938 0.082476 0.2084 -0.83066 0.010321 0.020483 -0.54613 0.025531 -0.31809 0.7637 -0.13626 0.013074 0.029268 0.010703 -0.0016629 0.4353 -0.0018957 0.035806 -1.0075 0.0027745 -0.075345 -0.010508 -0.57091 -0.0067813 0.068091 0.031014 -0.020961 -0.25842 -0.00013862 0 0.5142 -0.0096806 0.030451 0.31996 -0.023292 -0.013402 -0.35516 0.060651 0.0019418 0.010152 -0.8509 0.0027745 0.010006 -0.77699 -0.54209 0.0019418 0.008892 0.15382 0.0097276 0.15547 0 -0.57871 -0.032314 -0.36895 -0.59585 -0.046718 -0.6096 -1.1714 0.024098 -0.015006 -0.018902 -0.0042929 -0.16017 -0.78513 -0.88085 0.14652 0.2735 -0.36658 0 -0.84539 -0.0096806 -0.05725 -0.01037 0.04741 -0.68845 -0.30679 0.023052 0.013074 0.47701 0.27417 0.71984 0.0086135 -0.1524 -1.2929 0.0058309 -0.0083005 -0.7508 0.017824 0.033409 0.4932 -0.038034 0.010982 0.032845 -1.2929 0.010006 0.45871 0.0068044 0.0038854 -0.0072234 -0.029946 -0.0030475 0.73262 0.0095883 -0.025483 0.076566 -0.035176 0.0062481 0.027544 -0.0044312 0.013632 Deletion Peak 28 - CN values 16p13.3 chr16:5144019-7780235(probes 1275363:1276846) chr16:6066397-7771745(probes 1275995:1276834) chr16:7132184-7373048(probes 1276415:1276416) 0.00017967 0.00017979 Actual Copy Change Given -0.010508 0.027155 0.018243 -0.0042929 -0.02133 0.016818 -0.51053 -0.64556 0.38419 0.03031 -0.015054 -0.13281 -0.14875 -0.022744 -0.0036011 -0.0089906 0.029184 -0.0083005 -0.077777 -0.13936 0.33691 -0.016017 0.43092 0.019783 0.021043 -0.079875 -0.021342 -0.25298 0.31033 -0.20091 -0.01636 -0.10749 0.25949 -0.021979 0.1854 0.016351 -0.027808 -0.014916 -0.55557 0.3439 0.0033299 -0.0036011 0.031859 0.039195 0.052099 -0.065 -0.073209 0.0024969 0.35839 0.011261 -0.0044312 -0.85448 -0.32042 -0.046331 -0.013815 -0.028218 -0.059 0.09849 0.090285 0.041459 0 0.0032356 0.097688 -0.2659 -0.00073831 0.64959 0.42738 0.0069435 -0.013264 -0.58579 0.014749 0.28903 0.51246 0.0083351 0.63993 0.54541 -0.015466 -0.036129 -0.01409 -0.02151 -0.044957 0.033408 -0.010784 -0.045499 0.00013863 0.0051359 0.21464 -0.17398 0.0022193 -0.0049844 -0.53439 -0.027671 -0.060211 0.039619 -0.50121 0.0091705 0.0036076 -0.076723 0.066802 -0.046583 0.026233 -0.037626 -0.0025149 0.74428 0.080024 0.020308 0.23969 -0.0031859 -0.49878 -0.01037 0.45496 -0.0089906 -0.25938 0.015727 0.059651 0 -0.26985 -0.0047079 -0.0048461 -0.075745 -0.043059 0.10133 0.053379 -0.34973 -0.26372 -0.0062391 -0.046718 -0.019314 -0.018628 0.067035 0.04706 0.0474 0.45468 -0.81466 -0.051046 0.0062481 -0.00097017 -0.3943 -0.080275 0.031436 -0.017666 -0.16192 -0.23459 0.039054 0.40601 -0.0016629 0.56408 -0.013953 0 -0.042303 -0.12252 -0.60796 -0.23325 0.18783 0 1.3003 -0.020275 0.48356 -0.30345 -0.0040162 0.042302 0.5142 0.29676 -0.0036011 -0.012024 0.0098669 0.34665 0.71716 -0.2338 -0.019452 -0.026164 0.0031194 0.0093098 -0.60487 -0.15529 -0.12447 0.25949 0.027266 -0.0089906 0.0094491 -0.00097017 0.015028 -0.056712 0.04741 0.01702 0.075847 -0.5349 0.011539 -0.24715 0.020343 0.21883 -0.11404 -0.027671 0.027076 -0.045906 -0.1327 0.036935 -0.21973 -0.045917 0.042449 0.53467 0.0030522 -0.061008 0.7816 0.13391 0.083342 -0.1651 0.34421 0.051162 -0.23643 -0.041593 -0.0096032 0.034959 -0.055499 -0.69729 -0.604 -0.02151 -0.14297 -0.025451 0.22333 -0.0011087 0.38717 0.9775 0.4932 -0.49934 -0.013264 -0.089837 0.034818 -0.033269 0.024548 0.41212 0.49459 -0.025756 0.13066 0.00013863 -0.053881 -0.55121 0.030873 -0.016979 -0.0051227 0.51223 -0.0045695 -0.027945 -0.0094046 0.0016642 0.015308 -0.067993 -0.021373 0.11038 0.025531 0.24939 -0.013953 -0.15052 -0.099341 0.46793 0.30346 -0.031905 -0.029311 -0.016567 0.12152 -0.040752 0.0099027 0.015447 0.27188 0.031155 -0.20734 0.027778 0.022725 0.0073609 -0.010564 -0.046989 -0.041295 -0.10867 0.011444 -0.00097017 -0.024935 -0.01106 -0.05442 -0.043737 0.071966 0.74975 0.021463 0.027216 -0.042517 -0.29815 -0.67499 -0.19475 0.54841 -0.016429 0.04429 -0.050235 1.0057 0.49701 0.048324 0.044857 -0.016292 0.039054 0.62388 -0.030267 -0.15247 -0.76301 0.043299 -0.0095426 -0.0060904 0.58722 -0.03817 0.098124 -0.70792 -0.0066432 0.065513 -0.0013858 -1.0434 0.040609 0.0040196 -0.18257 -0.36601 -0.031311 -0.052126 -0.0096806 0.0064856 -0.027808 -0.010922 0.12845 0.25357 0.058367 -0.025346 -0.18848 -0.051721 0.18442 0.0081959 -0.099341 0.0084743 -0.29473 0.0081031 -0.0062286 -0.030478 -0.030212 -0.057627 0.79588 0.061582 0.044574 0.003191 -0.037762 0.1434 -0.00097017 -0.36045 0.47255 0.014609 -0.0099565 0.03369 0.56254 0.007711 -0.022058 -0.024427 -0.012989 0.00038819 0.31257 0.00597 0.70794 -0.0038779 0.40444 0.07988 0.12771 -0.46254 -0.81013 -0.062696 0.2958 Deletion Peak 29 - CN values 16q12.1 chr16:31804435-64977852(probes 1287495:1299380) chr16:48114144-48194022(probes 1288148:1288192) chr16:48167575-48173058(probes 1288171:1288172) 0.036923 0.32129 Actual Copy Change Given -0.010508 -0.010844 0.018243 -0.0042929 0.014888 0.016818 -0.51053 -0.64556 0.38419 -0.26997 -0.015054 0.37424 -0.14875 -0.022744 -0.63377 -0.0089906 0.029184 -0.0083005 -0.077777 -0.13936 -0.43301 -0.016017 0.43092 -0.87479 0.021043 -0.079875 -0.010646 -0.51414 -0.36288 -0.20091 -0.01636 -0.10749 0.25949 -0.021979 0.1854 0.016351 -0.027808 -0.014916 -0.14605 0.3439 0.0033299 0.77963 0.014888 0.039195 0.052099 -0.03432 -0.073209 0.0024969 0.35839 -0.020206 -0.0044312 0.017963 -0.32042 -0.02562 -0.013815 -0.028218 -0.059 0.09849 0.10264 -0.78698 0 0.0032356 -0.80019 -0.26409 -0.00073831 -0.21898 0.0114 0.0069435 -0.013264 -0.58579 0.0048579 0.28903 0.52241 0.0083351 0.63993 0.10745 -0.015466 -0.76535 -0.66365 -0.02151 -0.044957 0.033408 -0.010784 -0.59478 0.00013863 0.0051359 0.17359 -0.68086 0.0022193 -0.0049844 -0.53713 -0.027671 -0.060211 0.039619 -0.50121 -0.44889 0.015587 -0.031632 0.066802 -0.025209 0.026233 -0.037626 -0.0025149 0.033296 -0.48144 -0.36821 -0.48796 -0.0031859 -0.49878 -0.01037 0.46553 -0.0089906 -0.25938 0.015727 -0.21354 0.0026357 -0.26985 -0.0019399 -0.0048461 -0.075745 -0.043059 0.10133 -0.87111 -0.34973 -0.26372 -0.0062391 0.089272 -0.019314 -0.88496 0.1155 -0.91548 0.0474 0.51549 -0.78833 -0.020001 -0.90305 -0.5431 -0.83688 -0.080275 0.031436 -0.017666 -0.15136 -0.23459 -0.35419 -0.43534 -0.0016629 0.56408 -0.013953 0 -0.042303 -0.60284 -0.65351 -0.23325 0.18783 0 -0.53966 -0.020275 0.49234 -0.30345 -0.0040162 0.044574 -0.17525 0.28444 -0.0039787 -0.012024 0.0098669 0.39911 0.70738 -0.2338 -0.46099 -0.026164 -0.067527 0.0093098 -0.032224 -0.17499 -0.007472 0.25949 0.027266 -0.0089906 -0.51969 -0.00097017 0.015028 -0.070269 0.04741 0.01702 -0.21911 -0.5349 0.011539 -0.24715 -0.70711 0.21883 -0.11404 -0.027671 -1.0616 -0.045906 -0.1327 0.036935 -0.21973 -0.045917 0.042449 -0.34584 -0.7895 -0.061008 0 0.14801 -0.32042 -0.1651 0.34665 0.040118 -0.26871 -0.041593 -0.0065656 0.034959 -0.055499 -0.69729 -0.604 -0.02151 -0.14297 -0.014742 0.058822 -0.0011087 -0.51774 0.046133 0.4932 -0.49934 -0.00055444 -0.057116 0.034818 -0.033269 0.024548 0.41212 -0.2201 0.47084 0.13066 0.00013863 -0.053881 -0.51605 -0.31809 -0.016979 -0.0051227 0.51223 -0.032182 -0.027945 -0.0094046 0.0016642 0.015308 -0.057654 -0.020549 0.11038 0.025531 -0.1335 -0.013953 -0.15052 -0.099341 0.46793 0.31803 -0.021098 -0.029311 -0.015879 0.66493 -0.040752 0.0099027 0.015447 0.34892 0.031155 -0.20635 0.027778 0.022725 0.0073609 -0.75404 -0.47638 -0.016154 -0.074411 0.011444 -0.89634 -0.0087146 -0.01106 -0.014503 -0.021647 0.071966 -0.62379 0.021463 0.027216 -0.042517 -0.2781 -0.6417 -0.19475 0.54841 -0.016429 0.04429 -0.57467 -0.43973 0.49701 0.048324 0.044857 -0.016292 0.021744 -0.027261 -0.58471 -0.15247 -0.76301 0.043299 -0.0095426 -0.0060904 -0.11064 -0.64161 0.098124 -0.77795 -1.1023 -0.081625 -0.046965 -0.59312 0.040609 0.0040196 -0.18257 -0.36782 -0.031311 -0.052126 -0.0096806 0.0064856 -0.90381 -0.010922 0.13435 0.26532 0.058367 -0.97509 -0.18848 -0.46621 -0.2368 0.0081959 -0.099341 0.0084743 -0.29473 -0.61419 -0.0062286 -0.030478 -0.030212 -0.81114 0.014749 -0.74451 0.5338 0.003191 -0.037762 -0.7962 -0.00097017 -0.36045 0.46485 0.014609 -0.0099565 0.03369 -0.64342 0.007711 -0.50152 -0.024427 -0.00013862 0.00038819 -0.41476 0.00597 0.70794 -0.0038779 -0.061555 0.07988 -0.70181 -0.94999 -0.063758 -0.90115 -0.44469 Deletion Peak 30 - CN values 16q23.1 chr16:78098006-90354753(probes 1306678:1314204) chr16:78129058-79247026(probes 1306709:1307714) chr16:78583258-78586506(probes 1307212:1307213) 0.0077444 0.19929 Actual Copy Change Given -0.010508 -0.010844 0.018243 -0.0042929 0.014888 0.013326 -0.51053 -0.63036 0.38419 -0.26997 -0.015054 0.23406 -0.14875 -0.059187 -0.65557 -0.0089906 0.029184 -0.0083005 -0.06652 -0.13936 -0.44232 -0.016017 0.43092 -0.4579 0.021043 -0.079875 -0.0085766 -0.51414 -0.35791 -0.20091 -0.01636 -0.10749 0.25949 -0.016017 0.1854 0.016351 -0.027808 -0.014916 -0.15873 -0.49985 0.0033299 -0.0017088 0.029044 0.038206 0.052099 -0.037823 -0.073209 0.0024969 0.35839 -0.018078 -0.0044312 0.017963 -0.32042 -0.02562 -0.013815 -0.028218 -0.059 0.10513 0.10264 -0.0030475 0 0.0032356 0.88299 -0.26409 -0.00073831 -0.23618 0.0114 0.0069435 -0.013264 -0.58579 0.0048579 0.28903 0.54894 0.0083351 0.68589 -0.42506 -0.95464 -0.79728 -0.66365 -0.1092 -0.044957 0.033408 -0.010784 -0.6032 0.00013863 0.0051359 0.17359 -0.70902 0.0022193 -0.0049844 -0.53713 -0.0096806 -0.060211 0.037924 -0.50121 -0.44889 0.015587 -0.031632 0.066802 -0.020948 0.023987 -0.0089906 -0.0025149 0.033296 0.11726 -0.37722 -0.52133 -0.0031859 -0.49878 -0.01037 0.46553 -0.0089906 -0.26697 0.012232 -0.21354 0.020903 -0.25152 0.0075 -0.0082823 -0.080008 -0.043059 0.10133 -0.93178 -0.34973 -0.26372 -0.0033243 -0.024661 -0.019314 -0.89152 0.1155 -0.9372 0.022435 0.51549 -0.80335 -0.045499 -0.90305 0.048688 -0.83688 -0.06142 0.031436 -0.90462 -0.09089 -0.23459 0.03637 -0.45363 -0.0016629 0.56408 -0.014366 0 0.55142 -0.60284 -0.65351 -0.23325 0.18844 0.0027745 -0.53966 -0.016841 -0.027945 -0.30733 -0.0040162 0.044574 -0.17525 0.29469 -0.0039787 -0.012024 0.0098669 0.37943 0.0079175 -0.2338 -0.46099 0.0019418 -0.070338 0.0093098 -0.015191 -0.15606 0.52206 0.25949 0.027266 -0.0089906 -0.51969 -0.0078863 0.015028 -0.13094 0.04741 -0.63318 -0.21911 -0.53246 0.011539 -0.24715 0.039761 0.21883 -0.11404 -0.027671 0.077862 -0.045906 -0.1327 -0.055903 -0.21973 -0.035585 0.042449 -0.61575 -0.7895 -0.061008 0 0.15457 -0.32375 -0.1651 0.34665 0.040118 -0.26871 -0.041593 -0.0065656 0.029989 -0.055499 -0.69729 -0.604 -0.0094046 -0.14297 -0.014742 0.058822 -0.0011087 -0.53896 0 0.52888 0.41831 -0.91575 -0.081073 0.034818 -0.033269 0.024548 0.41212 -0.2201 0.47084 0.13066 -0.63793 -0.053881 -0.52854 -0.31809 -0.016979 -0.0051227 -0.55298 0.052222 -0.027945 -0.0094046 0.0016642 0.015308 -0.068395 -0.087341 -0.3993 0.025531 -0.1335 0.00023377 -0.15052 -0.099341 0.46793 0.30521 -0.89212 -0.029311 -0.015879 -0.49001 -0.040752 0.0099027 0.015447 0.35381 0.031155 -0.20635 0.027778 0.022725 0.0073609 0.020006 -0.47638 -0.014916 -0.05752 0.011444 -0.89634 -0.0087146 -0.01106 -0.047889 0.75414 0.064511 -0.6368 0.021463 0.030169 -0.042517 -0.28849 -0.6417 -0.19475 0.54841 -0.016429 0.023145 -0.59009 -0.44595 0.49701 0.048324 0.044857 0.0068044 0.021744 -0.062226 -0.58471 -0.15247 -0.76301 0.043299 -0.0067813 0.015028 -0.11064 -0.63017 0.012795 -0.8319 -0.57989 -0.081625 -0.046965 -0.60664 -1.025 0.0040196 -0.18257 -0.36782 -0.031311 -0.02384 -0.014228 0.0064856 -0.92993 -0.010922 0.13435 0.27503 0.072109 -1.0182 -0.18848 -0.47742 -0.2368 0.0081959 -0.23741 0.0084743 -0.29473 -0.61419 -0.0090509 -0.025893 -0.030212 -0.035797 0.016705 -0.74451 0.57594 0.003191 -0.037762 -0.79478 -0.00097017 -0.36862 0.46485 0.014609 -0.0099565 0.033065 -0.66792 0.0093098 -0.5292 0 -0.00013862 -0.042544 -0.41476 0.00597 0.70794 -0.0038779 -0.018078 0.080889 -0.725 -0.94999 -0.060748 -0.015329 -0.44469 Deletion Peak 31 - CN values 16q24.3 chr16:81745039-90354753(probes 1309675:1314204) chr16:89378665-90354753(probes 1314204:1314204) chr16:80400254-90354753(probes 1308806:1314204) 0.0002824 0.10152 Actual Copy Change Given -0.019589 -0.010844 0.016985 0.0041913 -0.019091 0.027049 -0.51053 -0.67518 0.38419 -0.26997 -0.015054 -0.63985 -0.24484 -0.059187 -0.65557 -0.0089906 0.029184 -0.0083005 -0.13131 -0.13936 -0.48292 -0.016017 0.43919 -0.4579 0.021043 -0.079875 -0.0085766 -0.51414 -0.35019 -0.20091 -0.03468 -0.10749 0.25949 -0.016017 0.1854 0.055582 -0.027808 -0.014916 -0.15873 -0.49985 0.0033299 -0.0017088 0.029044 0.038206 -0.78681 -0.085373 -0.073209 0.0024969 0.35839 -0.018078 -0.0044312 0.017963 -0.32042 -0.02562 -0.013815 -0.028218 -0.059 -0.86448 0.11521 0.84771 0 -0.0028646 -0.7738 -0.26409 -0.00073831 -0.23618 -0.44275 0.0069435 -0.013264 -0.58579 0.0048579 0.31257 0.54894 0.0083351 0.00083195 -0.42506 -0.95464 -0.79728 -0.71188 -0.10946 -0.044957 0.033408 -0.010784 -0.6032 0.00013863 0.0051359 -0.96382 -0.736 0.0022193 -0.0049844 -0.53713 -0.0096806 -0.060211 0.053521 -0.50121 -0.44889 0.015587 -0.031632 0.066802 -0.020948 0.023987 -0.035857 -0.022764 0.029777 0.11726 -0.37722 -0.52133 -0.0031859 -0.49878 -0.01037 0.46553 -0.017529 -0.30569 0.012232 -0.21354 0.006109 0.082765 0.0075 -0.0082823 -0.080008 -0.043059 0.066515 -0.93178 -0.34973 -0.26372 -0.0033243 -0.37662 -0.033405 -0.89152 0.075415 -0.99133 0.022435 0.51549 -0.82584 -0.045499 -0.92174 0.048688 -0.87883 -0.06142 0.031436 -0.87862 -0.09089 -0.27595 0.03637 -0.45363 -0.0016629 0.56408 -0.014366 0 0.55142 -0.64086 -0.65351 -0.30674 0.15284 0.0027745 -0.53966 -0.016841 -0.062092 -0.30733 -0.0040162 0.044574 -0.20527 0.29469 -0.0039787 -0.012024 0.0098669 0.37943 0.0079175 -0.2338 -0.46099 0.0019418 -0.070338 0.0093098 -0.015191 -0.15606 0.44223 0.26514 0.027266 -0.0089906 -0.51969 0.004719 0.015028 -0.13094 0.04741 -0.63318 -0.21911 -0.56766 0.011539 -0.25394 0.050819 0.21883 -0.11404 -0.027671 0.058081 -0.045906 -0.1327 -0.055903 -0.21973 -0.078412 0.042449 -0.66179 -0.7895 -0.061008 0 0.15457 -0.32542 -0.1651 0.34665 0.040118 -0.24752 -0.08113 -0.0065656 0.029989 -0.11149 -0.71255 -0.604 -0.020138 -0.14297 -0.015098 0.058822 -0.0011087 -0.53896 0 0.52888 0.40511 -0.95778 -0.089544 0.059508 -0.033269 0.031155 0.41212 -0.23018 -0.53388 0.13066 -0.63793 -0.053881 -0.61416 -0.31809 -0.0971 -0.010508 -0.58852 0.052222 -0.027945 -0.0094046 0.0016642 0.015308 -0.068395 -0.038578 -0.3993 -0.049532 -0.1335 0.00023377 -0.88045 -0.099341 0.46793 0.31803 -0.89212 -0.029311 -0.015879 -0.47025 -0.040752 0.0099027 0.015447 0.28311 0.031155 -0.20635 0.027778 0.022725 0.0073609 0.020006 -0.47638 -0.014916 -0.05752 0.011444 -0.89634 -0.0087146 -0.01106 -0.9159 0.75414 0.064511 -0.6368 0.021463 0.030169 -0.042517 -0.28849 -0.70008 -0.19475 -0.72013 -0.016429 0.023145 -0.59009 -0.44595 0.49701 0.048324 0.044857 0.0068044 0.021744 -0.062226 -0.019726 -0.15247 -0.76301 0.043299 -0.0067813 0.015028 -0.11064 -0.63017 0.012795 -0.8319 -0.072942 -0.081625 -0.026577 -0.60664 -1.025 0.017963 -0.20074 -0.36782 -0.031311 -0.046448 -0.014228 0.039861 -1.0088 -0.92159 0.13435 0.27503 0.048262 -1.0182 -0.18848 -0.51609 -0.2368 0.0081959 -0.23741 0.0084743 -0.29473 -0.61419 -0.0090509 -0.025893 -0.030212 -0.034876 0.019363 -0.76871 0.57594 0.003191 -0.037762 -0.83446 -0.42953 -0.32507 0.51682 0.020483 -0.0099565 0.033065 -0.66792 0.0093098 -0.5292 -0.076346 -0.00013862 -0.03084 -0.41476 0.00597 0.71716 -0.0038779 -0.13031 0.080889 -0.77634 -0.97722 -0.060748 -0.87946 -0.44469 Deletion Peak 32 - CN values 17p13.3 chr17:1-1826620(probes 1314205:1314451) chr17:1-1180656(probes 1314205:1314223) chr17:1-1182165(probes 1314205:1314225) 0.21028 0.21224 Actual Copy Change Given -0.9254 -0.58583 -0.38672 -0.087844 0.50012 0.018496 -0.0059818 -0.047006 -0.017803 0.0086135 -0.025483 -0.17946 -0.92786 0.04344 -0.66292 -0.015466 0.020763 -0.0095426 -0.10762 -0.21664 0.15786 -0.29544 0.41479 -0.00053796 -0.60061 -0.029584 -0.0031859 -0.2583 -0.21763 -0.2139 0.0068738 0.1679 -0.38392 0.3486 0.11253 -0.031568 -0.023977 -0.00069303 0.097688 0.34245 -0.024388 -0.89358 -0.037898 0.035806 0.064368 0.39475 -0.038578 0.0041632 -0.10522 -0.017547 0.0098669 0.021884 -0.21614 -0.014213 -0.89649 -0.031359 -0.034495 -0.82622 0.085943 0.020903 0.97915 -0.35996 -0.8112 0.0030676 0.008568 -0.72526 0.00027728 -0.00055444 -0.95 -0.15873 -0.41113 0.012376 -0.59731 -0.017803 -0.053611 0.059366 -0.047395 -0.81647 -0.020412 -0.55607 -0.05442 -0.010232 0.027076 -0.013815 -0.063301 -0.40871 -0.54222 0.35365 -0.01904 -0.4355 -0.55276 -0.75823 -0.024481 0.017963 0.11917 -0.0045695 -0.26877 0.33399 -0.21305 0.46383 -0.026304 -0.05442 -0.003207 -0.85647 -0.18826 0.008269 -0.059 0.033972 0.006996 -0.059538 -0.06424 -0.0027707 -0.5975 0.051245 -0.090096 -0.034086 -0.31517 -0.33376 -0.0019399 -0.052261 -0.10368 0.24591 -0.006256 -0.36366 -0.063435 0.12005 -0.036674 -0.89626 -0.94802 -0.097646 -0.4686 0.027347 -0.083681 -0.043331 -0.032314 -0.011887 -0.4044 0.22823 -0.1246 -0.34847 -0.81506 -0.65155 -0.55477 -0.10342 0.51986 0 0.16017 -0.65333 -0.3356 -0.72721 -0.092609 -0.62417 0.013213 -0.4023 -0.87369 -0.54401 -0.015191 -0.041295 -0.67848 -0.018902 0.020763 0.13341 -0.39808 -0.037171 0.0019418 -0.0023553 0.44139 -0.01354 -0.074343 -0.44091 -0.049559 -0.032384 -0.37921 -0.037218 -0.12435 -0.59374 0.24435 0.025581 -0.12629 -0.56744 0.0013868 -0.005814 -0.22207 0.050677 -0.016669 0.017824 0.034395 0.00027728 -0.9329 -0.06719 -0.2407 -0.81624 -0.21181 -0.20224 -0.080008 -0.14494 -0.20074 0.060222 -0.84851 0.028341 -0.3058 -0.010646 1.7892 -0.033677 0.085221 0.055088 -0.49131 -0.24241 -0.89561 0.3738 -0.42696 -0.058117 0.03863 -0.12849 -0.039647 -0.28679 -0.57397 0.57237 -0.046337 -0.27927 -0.0089906 -0.066708 -0.67499 -0.021373 -0.08094 -0.15221 -0.077249 0.035383 -0.033814 0.017684 -0.034631 -0.0012473 -0.015054 -0.0067813 -0.0049844 -0.15093 -0.095191 -0.026988 -0.020001 -0.013264 0.86487 -1.0051 -0.03286 -0.53865 0.0033299 -0.0036011 -0.087977 -0.12733 0.27947 0.053806 -0.083419 -0.52563 -0.17079 -0.32733 -0.053341 -0.32391 -0.88681 -0.12577 0.076854 -0.45265 0 0.0099027 -0.81901 -0.59806 0.018103 -0.024524 0.016705 -0.16828 0.010564 -0.066038 -0.041702 -0.046989 0.37677 -0.029268 -0.06142 -0.018902 -0.32019 0.48079 -0.049559 0.32818 -0.60593 -0.71158 0.040326 0.29024 -0.28655 -0.67738 -0.17752 -0.70899 -0.028833 0.039619 -0.53246 0.0076392 -0.040073 -0.064583 -0.84979 -0.03885 0.02806 -0.097232 0.17784 -0.55907 0.091199 0.094637 0.00013863 0.0043021 0.021884 -0.061958 -0.058596 -0.082897 -0.037626 -0.12488 -0.52194 -0.22182 -0.22724 0.0033299 0.68663 -0.83074 -0.020501 -0.05725 -0.01037 -1.2161 0.061365 -0.90411 0.12846 -0.32911 0.045708 -0.035448 0.0011093 -0.058193 -0.11525 0.020763 0.010982 -0.70361 0.07096 -0.30059 0.00458 0.38535 -0.053917 0.4348 0.016146 -0.76496 0.017496 0.0011093 -0.91047 -0.82105 -0.43713 0.058081 -0.015054 -0.024661 -0.0037395 0.024268 -0.029343 -0.81843 0.46605 -0.60844 -0.30651 -0.59635 -0.44405 0 -0.078308 0.00097064 -0.55266 0.052668 -0.70603 0 0.030732 -0.032178 -0.4678 Deletion Peak 33 - CN values 19p13.3 chr19:1-2166394(probes 1393318:1393671) chr19:1107036-1186532(probes 1393465:1393478) chr19:1-2327989(probes 1393318:1393710) 0.0059983 0.005836 Actual Copy Change Given -0.036918 -0.018138 0.071966 -0.015879 -0.66836 0.022278 -0.041431 0.48561 0.29549 -0.0018014 -0.053476 -0.68682 0.016565 -0.39697 -0.66226 -0.042652 -0.015741 -0.017529 0.39894 -0.0012473 0.15293 -0.13264 0.78427 0.49338 0.61697 -0.0053639 -0.035585 -0.25902 -0.069333 0.17327 0.38791 0.04883 0.046133 -0.059269 0.044574 -0.063775 -0.006505 0.010006 -0.012162 -0.09196 -0.039122 -0.0024938 -0.094064 0.010703 -0.043759 0.069186 -0.057789 -0.013677 -0.061958 0.0087528 -0.0073339 0.028481 -0.025209 -0.042995 -0.12901 -0.15131 -0.10539 -0.083663 0.081466 0.010285 0.40794 -0.40757 0 -0.25409 0.0020632 -0.73784 0 -0.034392 -0.041838 -0.15814 -0.35886 0.00041593 -0.1272 -0.021921 -0.10924 -0.15119 -0.14811 -0.44835 -0.072998 -0.0026322 -0.095252 -0.18861 -0.026167 -0.61181 -0.10781 0.10186 -0.11604 0.2133 -0.040073 -0.42375 -0.55005 -0.017391 -0.22502 0.012655 0.028481 -0.04048 -0.27535 -0.58353 -0.54995 -0.23496 0.010564 -0.13561 -0.0059733 0.031759 -0.2514 -0.00089735 -0.9171 0.021323 0.0085269 -0.14772 0.32576 -0.017529 -0.25322 0.068091 0.028903 -0.51702 -0.14013 -0.032996 -0.0027707 -0.037762 -0.12369 0.11257 -0.041702 0.29819 -0.046954 -0.039258 -0.052801 -0.020961 -0.14634 0 -0.085386 0.0026264 -0.13272 -0.14078 -0.057385 -0.024935 -0.58157 -0.66827 0.23566 -0.12623 -0.7766 0.30378 0 -0.37853 0.20052 -0.016979 0.50262 0.039761 -0.019314 -0.72842 0.095074 -0.55707 -0.33987 -0.059673 -0.089237 0.065647 -0.53804 -0.11717 0.03031 -0.050506 -0.047801 0.086088 -0.058462 -0.036265 0.0052749 0.094491 -0.61008 -0.014366 0.30849 0.030029 -0.091552 -0.10992 0.031577 -0.59234 0.053656 0.40277 0.22684 0.023897 -0.0040162 -0.015604 -0.052126 -0.030677 -0.21243 0.014609 -0.033506 -0.072541 0 0.0065262 1.0195 -0.058462 -0.21342 -0.11665 0.1786 -0.10342 -0.11077 0.0082367 0.050677 -0.24618 -0.10861 -0.27655 0.048713 -0.030813 -0.085183 -0.087447 0.084787 -0.93997 -0.31354 0 0.0091042 -0.22478 -0.085382 -0.10111 0.024408 -0.076145 0.4088 -0.60844 -0.050776 -0.025893 -0.059178 0.1732 0.016565 -0.11443 -0.17778 -0.052936 0.19345 -0.080807 0.094056 -0.48184 -0.060211 0.0075 -0.46749 -0.005261 -0.019863 0.037217 -0.60526 -0.083465 0.23511 -0.39775 -0.031632 -0.0011087 -0.65476 -0.06424 -0.041024 -0.11325 -0.3933 -0.02384 -0.043331 -0.54381 0.26028 -0.033132 -0.056664 -0.10854 -0.18645 -0.31046 -0.2965 0.64928 -0.085059 0.094056 0.066229 0.017124 -0.063838 0.0096241 0.026092 0.27332 0.66106 0.003191 0.54594 0.088258 0.01116 -0.056362 -0.078544 0.49718 -0.64556 -0.060033 -0.11743 -0.037218 -0.32797 -0.094196 -0.035448 0.17332 0.80383 -0.71105 -0.039414 0.19603 -0.23728 1.0485 -0.47067 0.32494 -0.056307 0.064797 0.27363 -0.063972 0.3938 0.013275 0.093766 -0.13393 0.02806 -0.12369 0.12211 -0.022469 -0.83975 -0.47342 -0.015054 -0.0024938 -0.10539 -0.059135 0.12064 -0.1233 -0.084262 -0.0094046 0.19041 0.16986 -0.21528 -0.015183 0.52345 -0.38895 -0.043554 -0.14451 -0.026714 1.0111 -0.01354 -0.8997 -0.082004 0.20713 0.011679 -0.061286 0.023566 -0.093006 0.036334 0.039619 0.011121 -0.044957 0 -0.0058345 -0.0016629 0.52223 -0.077158 -0.058292 0.012376 -0.7562 -0.52276 0.0043021 0.42991 -0.39486 -0.44405 0.065656 0.015727 -0.39319 -0.022881 -0.00097017 0.41492 0.011121 0.35822 0.19619 0.1786 -0.033432 0.24342 -0.029952 0.71565 -0.0060904 -0.082269 -0.026988 0.082476 -0.46674 -0.033141 0.67122 -0.46057 Deletion Peak 34 - CN values Xp21.1 chrX:30870233-32665140(probes 1503496:1504503) chrX:30870233-34033668(probes 1503496:1504717) chrX:32057877-32062998(probes 1504107:1504108) 0.052155 0.051993 Actual Copy Change Given 0.13376 -0.020609 -0.035176 -0.025072 0.010982 0.16214 -0.11221 -0.17778 0.073258 -0.0042929 -0.14284 -0.001153 0.024268 0.064654 -0.15631 -0.090361 0.02511 0.053094 0.15045 -0.015329 0.20763 0.019083 0.35675 0.095363 -0.65286 -0.0011087 -0.085722 -0.1272 -0.0038779 -0.041745 0.034466 0.050534 -0.43442 0.62606 -0.25745 -0.16169 -0.0013858 0.087873 -0.38414 0.14832 0.00013863 0.091445 -0.032178 0.0076392 0.13998 0.17477 0.012516 -0.025515 0.20335 0.00097064 0.018943 0.10482 -0.10039 0.096684 -0.19637 -0.15592 0.059721 -0.1318 0 0 0.05281 -0.055186 -0.2284 0.15396 -0.0039231 0 0.023145 0.074696 0.011999 0.044715 -0.078605 0.068378 -0.88147 0.16495 -0.11848 -0.0042929 -0.087844 -0.16929 -0.087977 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