sort

src/io/tcga_util.js

@@ -3,48 +3,49 @@ morpheus.TcgaUtil = function () {
 };
 
 morpheus.TcgaUtil.DISEASE_STUDIES = {
-	'LAML': 'Acute Myeloid Leukemia',
-	'ACC': 'Adrenocortical carcinoma',
-	'BLCA': 'Bladder Urothelial Carcinoma',
-	'LGG': 'Brain Lower Grade Glioma',
-	'BRCA': 'Breast invasive carcinoma',
-	'CESC': 'Cervical squamous cell carcinoma and endocervical adenocarcinoma',
-	'CHOL': 'Cholangiocarcinoma',
-	'LCML': 'Chronic Myelogenous Leukemia',
-	'COAD': 'Colon adenocarcinoma',
-	'CNTL': 'Controls',
-	'ESCA': 'Esophageal carcinoma ',
-	'FPPP': 'FFPE Pilot Phase II',
-	'GBM': 'Glioblastoma multiforme',
-	'HNSC': 'Head and Neck squamous cell carcinoma',
-	'KICH': 'Kidney Chromophobe',
-	'KIRC': 'Kidney renal clear cell carcinoma',
-	'KIRP': 'Kidney renal papillary cell carcinoma',
-	'LIHC': 'Liver hepatocellular carcinoma',
-	'LUAD': 'Lung adenocarcinoma',
-	'LUSC': 'Lung squamous cell carcinoma',
-	'DLBC': 'Lymphoid Neoplasm Diffuse Large B-cell Lymphoma',
-	'MESO': 'Mesothelioma',
-	'MISC': 'Miscellaneous',
-	'OV': 'Ovarian serous cystadenocarcinoma',
-	'PAAD': 'Pancreatic adenocarcinoma',
-	'PCPG': 'Pheochromocytoma and Paraganglioma',
-	'PRAD': 'Prostate adenocarcinoma',
-	'READ': 'Rectum adenocarcinoma',
-	'SARC': 'Sarcoma',
-	'SKCM': 'Skin Cutaneous Melanoma',
-	'STAD': 'Stomach adenocarcinoma',
-	'TGCT': 'Testicular Germ Cell Tumors',
-	'THYM': 'Thymoma',
-	'THCA': 'Thyroid carcinoma',
-	'UCS': 'Uterine Carcinosarcoma',
-	'UCEC': 'Uterine Corpus Endometrial Carcinoma',
-	'UVM': 'Uveal Melanoma',
-	'KIPAN': 'Pan-Kidney Cohort',
-	'COADREAD': 'Colonrectal adenocarcinoma',
-	'GBMLGG': 'Glioma',
-	'STES': 'Stomach and Esophageal Carcinoma'
+	"ACC": "Adrenocortical carcinoma",
+	"BLCA": "Bladder Urothelial Carcinoma",
+	"BRCA": "Breast invasive carcinoma",
+	"CESC": "Cervical squamous cell carcinoma and endocervical adenocarcinoma",
+	"CHOL": "Cholangiocarcinoma",
+//	"CNTL": "Controls",
+	"COAD": "Colon adenocarcinoma",
+	"COADREAD": "Colonrectal adenocarcinoma",
+	"DLBC": "Lymphoid Neoplasm Diffuse Large B-cell Lymphoma",
+	"ESCA": "Esophageal carcinoma ",
+//	"FPPP": "FFPE Pilot Phase II",
+	"GBM": "Glioblastoma multiforme",
+	"GBMLGG": "Glioma",
+	"HNSC": "Head and Neck squamous cell carcinoma",
+	"KICH": "Kidney Chromophobe",
+	"KIPAN": "Pan-Kidney Cohort",
+	"KIRC": "Kidney renal clear cell carcinoma",
+	"KIRP": "Kidney renal papillary cell carcinoma",
+	"LAML": "Acute Myeloid Leukemia",
+	"LCML": "Chronic Myelogenous Leukemia",
+	"LGG": "Brain Lower Grade Glioma",
+	"LIHC": "Liver hepatocellular carcinoma",
+	"LUAD": "Lung adenocarcinoma",
+	"LUSC": "Lung squamous cell carcinoma",
+	"MESO": "Mesothelioma",
+//	"MISC": "Miscellaneous",
+	"OV": "Ovarian serous cystadenocarcinoma",
+	"PAAD": "Pancreatic adenocarcinoma",
+	"PCPG": "Pheochromocytoma and Paraganglioma",
+	"PRAD": "Prostate adenocarcinoma",
+	"READ": "Rectum adenocarcinoma",
+	"SARC": "Sarcoma",
+	"SKCM": "Skin Cutaneous Melanoma",
+	"STAD": "Stomach adenocarcinoma",
+	"STES": "Stomach and Esophageal Carcinoma",
+	"TGCT": "Testicular Germ Cell Tumors",
+	"THCA": "Thyroid carcinoma",
+	"THYM": "Thymoma",
+	"UCEC": "Uterine Corpus Endometrial Carcinoma",
+	"UCS": "Uterine Carcinosarcoma",
+	"UVM": "Uveal Melanoma"
 };
+
 morpheus.TcgaUtil.SAMPLE_TYPES = {
 	'01': 'Primary solid Tumor',
 	'02': 'Recurrent Solid Tumor',